>input_sequence_54495
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-----------------------------------------------------ATGAGCCAGGACAAGGCCGCCGGCGAC
AAGGCCGCGGCGGAGCCCAAGAGGCAGACGCCGCGGCTCAACGAGCGGATCCTCTCCTCCCTCTCCCGGAGGTCCGTCGC
CGCCCACCCGTGGCACGACCTCGAGATCGGTGAGCCCCTTCC-CCATTTCGTCTCAGATCCGCCCGCCCGGCCGGAGCTG
TTGGTTGGTTGGTTGCTCACGCGGAACGC--GTGCTGATTGGTTGATCCCTTGCGCGAATTGGCTGGTGCAGGCCCCGGC
GCTCCGGCGGTGTTCAACGTGGTGGTGGAGATCACCAAGGGGAGCAAGGTCAAGTACGAGCTCGACAAGAAGACCGGGAT
GATCAAGGTCCG-----------------------------------------AAACTTTTCCCCTGTTAATTTGCATTG
GCATGGGCA-TGAATGTGTTCCTGACTCGCCGAGATCATCATCTGCCTGCCAGGTTGACCGGATCCTCTACTCGTCCGTG
GTGTACCCTCACAACTACGGCTTCGTCCCACGCACCCTCTGCGAGGATAACGACCCCATCGATGTCCTCGTCCTCATGCA
GGTAAATGAATCGATTCAACACTCCAATCATGCTCCGGTTCTCACAAGTGCAAATTAACAATCCTGTCAATACATCACCG
TCTGCATTACCCACCGTTCCTTTTCTGACGACTGCCTG----TTAATTA-----TTTCATTTCATTTCAAACCAGGAACC
GGTCCTCCCCGGCACCTTCCTCCGGGCCAGGGCCATCGGCCTCATGCCTATGATCGACCAGGCACGCTAAACCAATCCCC
TCATCTCTGTCCAAGTGTACAAGTCAACTTTCCACCCACCATTTTGGCATCAAGCTTATATTTATATCATACTCTCTGTT
TC---TTTTTCTTGAACAGGGAGAGAAGGATGACAAGATCATAGCCGTCTGCGCCGACGACCCCGAGTACCACAACCTGA
ACCATCTCAGCGAGCTCTCTCCTCATCGCCTCCAGGAGATCCGCCGCTTCTTCGAAGATTGTACGCATACCATTGCCTGC
CTCAT----CTCGCATTTCCACAACCTTTTCATGTATCTTCAGACTTCAAGTGCCTGATTCTTGGCTGATCAAATCTTTC
AGACAAGAAGAATGAGAACAAGGAGGTCGCTGTCAACGACTTCCTCCCCGCCGATGATGCTCGTGCTGCCATCCAACACT
CCATGTAAGCTCTCATCATTTTGGAGGATATGATCCTCTAGTTAAAGACAGAGAGTCCTCGAGGCTCCAAGGCGTCGATT
TATGTTGACAAAAATTGCTTTGATTCTTTTTCAGGGATCTGTACGGGGAATACATTATGCACAGCCTAAGGCGGTAG---
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr1B_1_TraesCS1B01G283300
CCTACCTTTTTGTCCGAGGAGATGGCGTGATACTGGTTTCGCCGCCCTTGCGGACCGTCTGA------------------
----------------------AGTCAGGGCGGAACAACTACCATTCAATGGGCATTGGCAGCAGCGCTATCGGGATGAC
ATGCATCGGCTTATTCATAATTTCCTGGA---------------------------------------------------
------------------------------------------CTCGCGAGACACCGCATAGCTTGAGTT----AATCATC
CATGTATCCTGATACAAAGAACAAAAAAAAAACACTGAACTCGACTTGTGTTATGTAGATCGATCTGAATCCGGCGCCTG
TTCGTCCATTGTTAGACCACAATCACCATAGTGGAGGGAAGCTTGAGTTAATCAT-CCTCTCCCAAC----ACCTC-TGA
CTGTTATCTAGTACAG----------------------------------CGGGGAGTATCAACATTCACTGGGCGTTCG
CAGTCCACAGGCG--------------------------------GTTCACGGTGAGCTGATTT--GTGCTTCGATGCGA
AATGAAAATAAATCAAT--TCGCGGGAC--AAACCGGTGTGTGGTGGGTGGGTCACTCCGTCCAGCCGGGCGAGACCG-C
CCAAAGTTGACACGATGATCACGGCACGTCCATGAACATGGTGGCGTGTGCCCCCCATCACGAGGAAAAATAATTTAAAT
TTGACCACAGCATCGTGCCAGTGGCAGCTTTTATTCAT-------------TTATTTACGTAC----------GAACGAT
GGCGCCTAGTGCGTTGTGAGTGACTGGATGCTTT----GATCCATGCACGTTGCGCATGTGCAGGGGTTCTGCCCAGCCC
AGTTGCCCAGTTTGTTTATACTGTGTTTATGATTTCTGTTGACGGTG------TTGGTGTGATCGGTCTGGATGCGGGGC
CGAAGCTTCGCACCGGCACGGCACGGCACGGCACGACACCGCATGCATTCGACGACGACGCGTTCACCGCTCGTCCCCCC
GCCCC--GCCAACTGCCC-TCTCTCCCCTATATATGCACGCCGAGCCGCGGACGTTTCGG-CATCCCGTCCTCGGAGCCG
CGCAACGATCCAGCACACGCAGCAGATTAAGCAGCGACCTCCTTCGACCGAAGATGAGCCAGGACAAGGCCGCCGGCGAC
AAGGCCGCGGCGGAGCCCAAGAGGCAGACGCCGCGGCTCAACGAGCGGATCCTCTCCTCCCTCTCCCGGAGGTCCGTCGC
CGCCCACCCGTGGCACGACCTCGAGATCGGTGAGCCCCTTCC-CCATTTCGTCTCAGATCCGCCCGCCCGGCCGGAGCTG
TTGGTTGGTTGGTTGCTCACGCGGAACGC--GTGCTGATTGGTTGATCCCTTGCGCGAATTGGCTGGTGCAGGCCCCGGC
GCTCCGGCGGTGTTCAACGTGGTGGTGGAGATCACCAAGGGGAGCAAGGTCAAGTACGAGCTCGACAAGAAGACCGGGAT
GATCAAGGTCCG-----------------------------------------AAACTTTTCCCCTGTTAATTTGCATTG
GCATGGGCA-TGAATGTGTTCCTGACTCGCCGAGATCATCATCTGCCTGCCAGGTTGACCGGATCCTCTACTCGTCCGTG
GTGTACCCTCACAACTACGGCTTCGTCCCACGCACCCTCTGCGAGGATAACGACCCCATCGATGTCCTCGTCCTCATGCA
GGTAAATGAATCGATTCAACACTCCAATCATGCTCCGGTTCTCACAAGTGCAAATTAACAATCCTGTCAATACATCACCG
TCTGCATTACCCACCGTTCCTTTTCTGACGACTGCCTG----TTAATTA-----TTTCATTTCATTTCAAACCAGGAACC
GGTCCTCCCCGGCACCTTCCTCCGGGCCAGGGCCATCGGCCTCATGCCTATGATCGACCAGGCACGCTAAACCAATCCCC
TCATCTCTGTCCAAGTGTACAAGTCAACTTTCCACCCACCATTTTGGCATCAAGCTTATATTTATATCATACTCTCTGTT
TC---TTTTTCTTGAACAGGGAGAGAAGGATGACAAGATCATAGCCGTCTGCGCCGACGACCCCGAGTACCACAACCTGA
ACCATCTCAGCGAGCTCTCTCCTCATCGCCTCCAGGAGATCCGCCGCTTCTTCGAAGATTGTACGCATACCATTGCCTGC
CTCAT----CTCGCATTTCCACAACCTTTTCATGTATCTTCAGACTTCAAGTGCCTGATTCTTGGCTGATCAAATCTTTC
AGACAAGAAGAATGAGAACAAGGAGGTCGCTGTCAACGACTTCCTCCCCGCCGATGATGCTCGTGCTGCCATCCAACACT
CCATGTAAGCTCTCATCATTTTGGAGGATATGATCCTCTAGTTAAAGACAGAGAGTCCTCGAGGCTCCAAGGCGTCGATT
TATGTTGACAAAAATTGCTTTGATTCTTTTTCAGGGATCTGTACGGGGAATACATTATGCACAGCCTAAGGCGGTAGAGT
GTGTACTATTACCATTTTTCCTTTGCCCTTCCTCCTATGATGGGAAGCAAAGAAGATCCCCTCAGAACATTTGGGATCTG
ATGAACAACCAAGCGAGTCTGTATTTCTACATTCTTGCATTGTA------------------------------------
-----------------------------------------------TTAGCCATATTTTCCCATCGCTGTGGTACTATG
TATCTCAAATTTGTATTCGAGACCTTGTGGTTTGCCTCGTGTATTATCTTCAGTTCTTACTGAATGGACAATAATATAAC
AATTT-TCATATTGATATCTGAGATACTGTGGTAATGCCATATCTCAAATTTGTATTTTAGACCTTGTGGTTTGGCTCGT
GTATCTTCAGTTC---TTACTGAAGGAACAATAATATAACAATTTG--------ACACATTGATATCTGAGATACTGCAG
TACTACCTATCTCAAATTTGTATTGAAGACCTTGTGAATTGGCCTGTGTATCATCTTCAGTTCTTACTAAACGAACAATA
ATATAACAATTTGTAACATTGATATA-----TGACATACGTGTTTTTTCACCCCTTGTCAGATTGATTATTTTTGGTCTG
CAAACTTCAAAATTGAATAAGTTGACCCCATCTTTTTAATTCCGGACATTGCGTGTCCCTCATTCCATTTGGAGTCGTAC
CAATGCTA--------ATGCTGCCTAGTTTCCTAAGAGGACAT----GTGGCCATCCAGGTCATCTTCTGCAACATCATG
TACTTGTAGACTGGATGCTAAACAAAATGAGAAGTTTAGACCTATTTGTTTACTGAGTGTGAGTTTTAAAATAATTACTA
AAGTGTCGATGAATAGTCTTAGCAAAGTGGTGAGCCCTATCATCTCACAAACTCAGACT-GGTTTTCTGAAAGGAAGATA
TATCATGGAAGGTGTGGTTGTTCACTTGTTCTACATGAAGCTTTAAATTCTATCCATCATTGGAAACAAAATGCCCTTTT
GTTTAAGGTTGATTTTGCAAAGATGATGATAAGATTCCGAAAAAGGGTTTCCCCCCGCTTTGTATACAAA
>chr1D_1
CCTACCTTTTTGTCCGAGGAGATGGCGTGATACTGGTTTCGCCGCCCTTGCGGACCGTCTGATGGCGTGATACTGGTTTC
GCCGCCCTTGGAGACCGTCTGAAGTCAGGGCGGAACAACTACCATTCAATGGGCATTGGCAGCAGGGCTATCCGGATGAC
TTGCATCAGCTTATACATGATTC---------------------------------------------------------
---------------------------CTGGAGCATTGCTGGCTCGCGAGACACCGCGTAGCTTGAGTT----AATCACC
CATGTATCCTGATACAAAGAACAAAC---AAACACAGAACTCGACTTGTGTTATGTAGATCCATCTGAATCCGGCACCTG
TTCGTCCATTAGACCATATC----ACCACAGTGGAGGGAAGCTTCAGTTAATCAT-CCTCTCCCAAC----ACCTTTTGA
CTGGAATCCAGTACAGTACGTACTCCGGGCCACGGACGGGGAGGGGCGAGCGGGGAGTATAAACATTCACTGCGCGTTCA
CAGTCCACAGTCAGATTTTTTTTTTGAGGAAACAGTCCACAGTCAGTTCACGGCGAGCTGATTT--GTGCTTCGATGTGA
AATGAAATAAATCTATTCGTCGCGAAAC--TAACCTGTG-GTGGTGGGTGGGTCACTCCGTCCAGCCGGGCGAAACCCCA
-CAAAGTTGACACGATGATCACGGCACGTCGATGAACATGGTGGCGTGTG-CCCCCATCACGAGGAAAAATAATTTAAAT
TTGACCGCAGCATCGTGCCAGTGGCAGCTTTTATGTACTTTATTTAAGGT---------------------ATGAACGAG
GGCGCATAGTGCGTCGTGAGTGACTGGATGCTTTGATCGATCCATGCACGTTGCGCATGTGCAGGGGTTCTGCCCAGC-C
AGTTGCCGAGTTTGTTTATACTGTTATTATGTTTTTTGTTGACGGTGCACGTGTTGGTGTGATCGGTCTGGATGCGGGGC
CGAAGCTTCGCACCGGCACGGCACCGCATACATC---------------CGACGACGACGCGTTCACCGCTCGTCCCCCC
GCCCCCTGCCAACTGCTCTTCTCTCCCCTATATATGCACGCCGGGCCGCGGACGTTTCGGCCATCCCGTCCTCGGAGCCG
CGCAACGATCCAGCGCACGCAGCAGATTAAGCGGCGACCTCCTTCGATCGAAGATGAGCCAGGACAAGGCCGCCGGCGAG
AAGGCGGCGGCGGAGCCCAAGAGGCAGACGCCGCGGCTCAACGAGCGGATCCTCTCCTCCCTCTCCCGGAGGTCCGTCGC
CGCCCACCCGTGGCACGACCTCGAGATCGGTGAGCCCCTTTCTCCATTTCGTTTCAGATCCGTCCGTCTGGCCGGAGCTG
TTGGTTGGTTGGTTGCTCACGCGGAACGCATGTGCTGATTGATTGATCCCTTGCGCGAATTGCCCGCTGCAGGCCCCGGC
GCTCCGGCGGTGTTCAACGTGGTGGTGGAGATCACCAAGGGGAGCAAGGTCAAGTACGAGCTCGACAAGAAGACCGGGAT
GATCAAGGTCTG-----------------------------------------AAACTTTTGCCCTGTTAATTTGCATCG
GCAC--GCA-TGAATGTGTTCTGAGATCATCATCT-----------CTGCCAGGTTGACCGGATCCTGTACTCGTCCGTG
GTGTACCCTCACAACTACGGCTTCGTCCCACGCACCCTCTGCGAGGACAACGACCCCATCGATGTCCTCGTCCTCATGCA
GGTGAGTGAATCGAC-CAACACTCCAATCATGCTCCGGTTATGACAAGTGCAAATTAACAATCCTGTCAAGGCATCACCG
TCTGCATTACCCACCGTTCTTTTTCTGACAGCCGCGTGTTAATTAATTA-----TTTCATTTCATTTCAAACCAGGAACC
CGTCCTCCCCGGCACCTTCCTCCGGGCCAGGGCCATCGGCCTCATGCCTATGATCGATCAGGCACGCTAAACCAATCCCT
TCATCTCTGTCCAAGTGTTCAAGTCAACTTTCCAGCCACCATTTTGGCATCAAGCTTATATTTATATCATACTCTCTGCT
A----TTTTTCTTAAACAGGGTGAGAAGGATGACAAGATCATAGCCGTCTGCGCCGACGACCCCGAGTACCACAACCTCA
ACCATCTCAGCGAGCTCTCTCCTCATCGCCTCCAGGAGATCCGCCGCTTCTTCGAAGATTGTACGCATACCATTGCTTGC
CTTAT----CTCGCATTTCCACAACCCTTTCATGCATCTTCAGGCTTCAAGTGTGTGATTCTTGGCTGATCAAATCTTTC
AGACAAGAAGAATGAGAACAAGGAGGTGGCTGTCAACGACTTCCTCCCCGCCGATGATGCTCGTGCTGCCATCCAGCACT
CCATGTAAGCTCTCATCATTTTGGGGGATATGATCCTGTAATTAAAGACGGAGAGTCCTCGAGGCTCCAAGGCGTCGATT
TATGTTGACAAAAATTGCTTTGATTCTTTTTCAGGGATCTGTACGCGGAATACATTATGCACAGCCTAAGGCAGTAGAGT
GTGTACTATTACTATTTTTCCTTTGCCCTTCCTACTATGATGGGAAGCAAAGAAGATCCCCTCGGAACATTTGGGATCTG
ATGAACAACCAAGCCAGTCTGCATTTCTACATTCTTGCATTGTACTCCCTCTGTAAACTAATATAAGAGTGTTTAGATCA
CTACTTTAGCTATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTATTAGCCATATTTTCCCATCACTGTGGTACTATG
TATCTCAAGTTTGTATTCGAGACCTTGTGGTTTGGCTCGTGTATTATCTTCAGTTCTTACTGAACGGACAATAATATAAC
AATTT-TCACATTGATATCTGAGATACTGTGGTAATGCCATATCTCAAACTTGTATTCTAGACCTTGTGGTTTGGCTCGT
GTACCTTGAGTTC---TTACTGAAGGAACAATAATATAACAATTTG--------ACACATTGATATCTGAGATACTGCAG
TACTACCTACCTTAAATTTGTATTGAAGACCTTGTGGTTTGGCCCGTGTATCATCTTCCGTTCTTACTAACCGAACAATA
ATATAACAATTTGTCACATTGATATA-----TGAGCTAAGTGTTTTTTCACCCCTTGTCAGATTGATTATTTC-------
CAAACTTCAAAATTGAATAAGCTGACCCCATCTTTTTAATTCCGGACATTGTGTGTTCCTCATTCCATTAGGAGTCGTAC
CAATGCTA--------ACGCTGCTTAGTTTCCTAAGAGGACAT----GTGGCCATCCAGGTCATCTTCCGCAACATCATG
TACTTGTAGAATGGATGCTAAACAAATTCAGAAGTTTAAACCTATTTGTTTACTGAGTGTGAGTTT-AAAATAATTAGTA
AAGTGTCAATGAATAGACTTAGCAAAGTGGTGAGCCCTGTCATCTCACAAACTCAACACAGGATTTGTGAAAGGAAGATA
TATCATGGAAGGTGTGGTTGTTCACTTGTTCTACATGAAGCTTTAAATTCTATCCATCACTAGAAACAAAATGCCCTTTT
GTTTAATGTTGATTTTGAAAAGATTATTGATAAGAT----------------------------------
>chr1A_1
CCTACCTTTTTGTCCGAGGAGATGGCGTGATACTGGTTTCGCCGCCCTTGCGGACCGTCTGATGGCGTGATACTGGTCTC
GCCGCCCTTGGGGACCGTCTGAAGTCAGGGCGGAACAACTACCATTCAATGGGCATTGGCAGCAGCGCTATCCGGATGAC
ATGCATCAGCTTATACTCCCTCCGTTCTAAAATAAATGATTCAATTTTATACTAACTTTAGTATAAAGTTGGGTCATCTA
TTTTGGAACGGAGGGAGTACATGTTATCTGGAGCATTACCGGCTCGTGAGACACTGCATAACTTGAGTTAATCAATCATC
CATGTATCCTGATACAAAGAGAAAAC---ACTGTACTCACATC-----TGTTATGTAGATGGATCTGATTCAGGCACCTG
TTCATCCATTAG------------ACCATAGTCGAGGGAAGCTTGAGTTAATCATTCCTCTCCCAGCGCCTACCTC-TGA
ATGGCATCTAGC-------------------------------------------AGCATCAACATTCACTGCGCGTTCC
CAGTT-----GCG--------------------------------GTTCACGGCGAACTGATTTTCGTGCTACGATATGA
AATGTAATAAGTCAAAT--TCGCGAAACAAAAACCGGTG-GTGGTGGGTGGGTCACTCCTTCCAGCCGGGCGAGACCCCC
CCAAAGCTGACACGATGATCACGGCACGTCGATGAACATGGCGCCGTGTGCCCCCCATCACGAGAAAACC-AATTTAAAT
TTGACCGCAGCATCGTGCCGGTGGCAGCTTTTTATGTATTTACTATTACTATTATTTACGTATATGTACGCATGAACGAT
GGCGCCTAGTGCGCTGTGAGTGACCGGATGCCTT----GATCCATGCACGTTCCGCATGTGCAGGGATTCTGCCCGGC-C
AGTTGCCCAGTTTGTTTACACCGT--TTATGTTTTTTGTTGACGG---------------------------TGCGGGGC
CGAAGCTTCGCACCGGCACGGCACCGCATGCATC---------------CGACGACGACGCGTTCACCGCTCGTCCACCC
GCCCC--GCCAACTCCTCTCCT-------ATATATGCACGCCGGGCCGCGGACGTTTCGGCCATCCCGTCCTCAGAGCCG
CGCAACGATCCAGCGCACACAGCAAATTAAGCAGCGACCTCCTTCGATCGAAGATGAGCCAGGACAAGGCCGCCGGCGAG
AAGGCGGCGGCGGAGCCCAAGAGGCAGACGCCGCGGCTCAACGAGCGGATCCTCTCCTCCCTCTCCCGGAGGTCCGTCGC
CGCCCACCCGTGGCACGACCTCGAGATCGGTGAGCCCCTTCC-CCATTTCGTCTCAGATCCGGAGCTGC-----------
-----TGGTTGGTCGCTCACGCGGAACGT--ATGCTGATTAGTTAATCT-TTGCGTGAATTGGCCGGTGCAGGCCCTGGC
GCTCCGGCGGTGTTCAACGTGGTGGTGGAGATCACCAAGGGGAGCAAGGTCAAGTACGAGCTCGACAAGAAGACCGGGAT
GATCAAGGTCTGCAGTCTGCGCCCGCGCGCATTCCCTTCCCTCGCCTCTCTCAAACCCTTTTCCCTGTTAATTTGCATCG
GCATGGATCGTGGATGTGTTCTGAGATGT--GAGATCATCATCTGCCTGCCAGGTCGACCGGATCCTCTACTCCTCCGTG
GTGTACCCTCACAACTACGGCTTCGTCCCACGCACCCTCTGCGAGGACAACGACCCCATCGATGTCCTCGTCCTCATGCA
GGTGAGTGAATCGAC-CAACACTCCAATCATCGTCCTGTCATGACAAGTGCAAATTAACAATCCTGTCAAGGCATCACCG
TCTGCATTACCCACCGTTCTTTT-CTGACAACCGCGTGTTAATTAATCATTTCTTTTCTTTTCTTTTCAAACCAGGAACC
AGTCCTCCCCGGCACCTTCCTCCGGGCCAGGGCCATCGGCCTCATGCCCATGATCGATCAGGCACGCTGAACCAATCCCC
TCATCCCTGTCCAAGCGCACAAGTCAACTTTCCAGCCACCATTTTGGCATCAAGCTTATATTCATATCATACTCTCTGTT
TTTTGTTTTTCTTAAACAGGGAGAGAAGGATGACAAGATCATAGCCGTCTGCGCCGACGACCCCGAGTACCACAACCTCA
ACCATCTCAGCGAGCTCTCTCCCCATCGCCTCCAGGAGATCCGCCGCTTCTTCGAAGATTGTACGCATGCCATTCCCTGC
ATTATATATCTTGCATTTCCGCAACCTTTTCATGCATCTTCAGGCTTCAAGTGCCTGATTCTTGGCTGATCAAATCTTTC
AGACAAGAAGAATGAGAACAAGGAGGTGGCTGTCAACGACTTCCTCCAGGCCGATGATGCCCGTGCTGCCATCCAGCACT
CCATGTAAGCTCTCGCCATTTTGGACGATGATCTGTAATCAAGCTCAAGAGGCATTGAGGACCG----AAGGCGTCGATC
TATGCTGACCTAAATTGATTTGTTTC-TTTTCAGGGATCTGTACGCGGAATACATTATGCACAGCCTAAGGCAGTAGAGT
GTGTACTATTACTATTTTTCCTTTGCCCTTCCTCCTATGATGGGATGCAAAGAAGATCCCCTCGGAACATTTGGGGTCTG
ATGAACAACCAAGCGAGCCTGTATTTCTACATTCTTGCTTT---------------------------------------
--------------------------------------------GTATTAGCCATATTTTCCCATTACTGTGGCACTATG
TATCTCAAATTTGTATTCGAGACCTTGTGGTTTGGCTCGTGTATTATCTTCAGTTCTTACTGGACGGACAATAATATAAC
AATTTATCACATTGATGTCTGAGATACTGTGGTAATGCCATATCTCAAATTTGTATTCTAGACCTCGTGGTTTGGCTCGT
GTATCTTCAGTTCTTATTACTGAAGGAACAATAATATAACAATTTGTCACATTGACACATTGATATCTGAGATACCGTAG
TACTACCTATCTCAAATTTGTATTGAAGACCATGTGGTTTGGCCCGTGTATCATGTTCAATTCTTACTATATGAACAATA
ATATAACAATTTGTCACATTGATATACAGTATGAGCTAAGTGTTTTTTCACCCCTTGTCAGATTGACCATTTTTGGTCTC
CAAACTTC-AAATTGAATAAGCTAACCCCATCTTTTTAATTCTGGATATTGTGTGTCCCTCGTTCCATTTGGAGTCGTAC
CAATGCTGAGTTGCTGACACAGACTAGTTTCCTGAGCTGAGAGGACAGTGGCCATCCAGGTCATCTTCCGTATCATCATG
TACTTGTAGAATGGATGCTAAACAAATTCAGAAGTTTATGCCTATTTGTTTACTGAGTGAGT-TTT-AAAATAATTACTA
AAGTGTCGATGAATAGACTTAGCAAAGTGGTGAGCCCTGTCATCTCACAAACTCAGACT-GGTTTTGTGAAAGGAAGATA
TGTCGTGAAAGGTGTGGTTGTTCACTTGTTCTACATGAAGCTTTAAATTCTATCCATCACCGGAAACAAAATGCCCTTTT
GTTTAAGGTTGATTTTGAAAAGATTATGATAA--------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------S------S---S---SSS-SS----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------SSSS------S---------------------------------------S----
----------SSSSS-SSS-SSSS--------------------------------------------------------
---SS-------------------------------------------------------------------S------S
-----------------------------------------------------S-----------------------S--
-------SS--SSS----------SS-------------S-------------------------------------S--
------------------------------S-------------------------------------------------
------S----------------------------S-S------------------------S-----------------
------------------------------------------------------------------------------S-
------------------------SS-----S---S--------------------------------------------
------------------------S---S-SSS-SSSSSSSSSSSSSSS-------------------------------
----------------S--------------------------S------------------------------------
--------------S--------------------------------S-------------------------------S
-----S--------------------------------------------------------------------------
--------------------------------------------------------------S---S-------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
----------S--------------------------------------------------S----------------S-
---------------------SSSSS--SS--------------------------------------------------
-----------------------------------------------S--------------------------------
---S-S--------SS------------------------S-S---------------------------SS--------
-------------------S---------S--S--S--------------------------------------------
S--------------------------------------------------------S----------------------
----------------------------------S---------------------------------------------
-S-----------S----------------------------------------------------------------S-
--------------------------------------------------------------------------------
--S-------------------------------S--------S------------------------------------
---------------------------S-----------------------------------------------S----
-------------------------------------S--S---------------------------------------
---------------------------------------------S--------------------------S-------
------------S--------------------------------------------------S----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------------------------------S-----------------------------S---------------
---------S-----------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------------------SS------S-----------------------------------
--------------S-------------------SS--S----------------------------------------S
---------------------S-----------------------------S----------------------------
-----------------S--------------------------------------------------S-----------
----------S---------------S-S---------S---------------------------S-------------
----------------S---------------------S---------------------------S-------------
-----------------------------------------------------------S--------------------
-----------------S------S-------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAACATTCACTGGGCGTTCG
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_1709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------GCCGAGATCATCATCTGCCT--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GACCGGGAT
GATCAAGGTCC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------TCTTAGCAAAGTGGTGAGCCC-------------------------------------------
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----------------------------------------------------------------------
