>input_sequence_54460
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-----------------------------------------------ATGCTCTCATCCACCGCTCTCCGGCCGCTGTCG
CCGGCGACGGCAACGACGCCCGCGTACCCAGCCACCGCTACTGCTACTGCTACCGCCACCGTCACCTCGGCCACGCCCGG
GCGACGCTCGGTTGCGGTGCGCGTGCTGCGGGACTACGGCTCGATCCCGAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCA
TCCTCGACGAGTTCTTCAAGCAGGAGAAGCCTCTCGTCCAGCGCACCAAGGACCACATCACAGGTATCCTGCTATGATAA
TCCC-CTCTAATTCCTCTTTCAGCAGGGCTC--GAGTTCCTGATTAACCTTTTTCTGT--AATTTTTTAGTGCGTGTGGG
TGTGATGCGGCTTCCTGCCAAGGTTAAAGCCGGCCAGTAGTGGTTTAGTTTAGGCATGTACTACTAGCTCAGATCTGGTT
TCGGTTCTGTTGTTTGTTTGTTTAGTTTTCCGCGTGTTCCGTTTAATTTTGAGACCTT------ATACTGTTGAAAGCTT
GCTTGGTTTGGTGTAAATTCGAGTGCTAAATGCAGAGTGGTTACAAAGTTT-----------------------------
------CGCGAGCTAAATACAACTAGTTCAGATAGACTAGCCTGAGATGTGAAGTGGGTCATTTACAGTCAGCACTCCGG
TTTACTGAGTAAGTAAGTTCGTGTGTGTGCACCCAAATCGGCCGCATAAATCAGAGGTCTAACAATTGTTCTTCATAACA
TATTTCTAAGCATAC------GAAGTTTCTGG--CTCGGGATTTGAACAGTGTTAATTGGATCTGAAAGAATTCTAACAG
TGGTTCTTCTTATCTGGGTACAGATTATTGCACGACCCTTGAGGGTGATGATTGCTGCAGCTGCTGGGATGCCTATTTTG
AACTCAACAAACTCGAGGTATGCACCGGCACCGCGGCCAAAATCATCTTTTCATAAATCAAAGTTACCAAATTCATCACG
AGCATGCTGCACTCTCG--------------------------------------------------------------C
TTGCGACAATCCAATCCAACTAACCACTCTTCTCCATTTCCCAGCAAGAGCTACCGCAAGAAGAAATTTCAAGGATGGTG
AAGGACTCGCGGTCAGACCCGAGGTACCTTATAAGCAGCATCCACCACCGGTCAGACCTACGGAAGAAGATGGCCGAGAA
AGCTCACAATTCGGCGCCATCAAACTCCCCGGGGCAAACAGCGAAGCCGAGGCCTTTCCCCGTCCCCGACGGGCTGCCGA
AAACGCAGGAAGAGATCGACGAGGATGAGGAGGCCCTCATGCCGGAGTCTCCTTACACGAGGCTGCTCAGAAGGATGGGG
AGGTTTCCCGACTGGTATACCCCTCGCCCAGACCATGAGACCGACTGA--------------------------------
--------------------------------------------------------------------------------
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-----
>chr5D_1_TraesCS5D01G412400
CGTTGCATCGTACTGGACATAGATTGTTGTCTATTTTTCGACCCAGAAAAACCCGTGATAGATCTCTCGAATTTGTCATC
GTGGGAGCCAACAGTGCCACGTGTGTCGTGGAAGAGGATGGGGCGGCTGCCGTGGATAGTACAGTGTCGGGAGAGTTCAT
ACCGTCGGTGTGCGATGCCTTGGCGGAAGGTTCCCGTCCGATAACACATTTAGCTACTAGGCTGCATCCCCGCACGACGA
CGTTGTTGGGGAGAGTGGAGAGTGGAGGAGCTTGCTAGGGGAGGAGGCACCGAGGGAGGGGGGGGAGGCGGTGGCTAGGG
TGTTGGTGATGAGAGCGCCTTTCCATCGGGCTTTTATAAGCGGAAACTGCAAGGAGCTGATGTTGCGTGGCGTCCATCCA
ATAGACCGCCATGGGAATCCAAGGGCCGATGGTTAGTGGTCACGTCACTCGCTGGTGATTATTTGTGTGTGATGGTGTGT
AGAAGGGCCGCGGGGGCTTCAAAATCCACCCGTGGTGCGAGAAGGAAAAATATGAAACTTCTGTCTCACACTGGCAGTTG
TCGATGAAGCAGACTGTAAATCGGGTCTCCACAATCTCCACGTTTGGAGGCTACGAGGTTTTTGAATCGAACTCCATTAA
TTT-GAAGATCGCAACATATC-GACAACTCTGTTAGTGT----TTTCTTTTACTGATCATCATACTAACGGTTATTATGG
TGATCGGTCATGCACGATGAATCTGCTAGAGTTGCTCGAAGGATGCGTATGCTAAAATTACAAATTAAGAGGTTATATTG
CAAAAGGGG-CAAAAATACAATAATATTTCCTGTGACACATACTAGATCTCAGGTTCAGAACCGATCCTTATCCGTTCTA
GTACCACTCTTCCCCTTCCTGGTCCTTTATATAGAAAAAAACTTCGAGCCAATCCACTCCCCGATACAGCTCCCCCCATC
CAAAACCCACCGAAGTAAAACCGACGAGACAAGGACCAAACACCAAAATGCTCTCATCCACCGCTCTCCGGCCGCTGTCG
CCGGCGACGGCAACGACGCCCGCGTACCCAGCCACCGCTACTGCTACTGCTACCGCCACCGTCACCTCGGCCACGCCCGG
GCGACGCTCGGTTGCGGTGCGCGTGCTGCGGGACTACGGCTCGATCCCGAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCA
TCCTCGACGAGTTCTTCAAGCAGGAGAAGCCTCTCGTCCAGCGCACCAAGGACCACATCACAGGTATCCTGCTATGATAA
TCCC-CTCTAATTCCTCTTTCAGCAGGGCTC--GAGTTCCTGATTAACCTTTTTCTGT--AATTTTTTAGTGCGTGTGGG
TGTGATGCGGCTTCCTGCCAAGGTTAAAGCCGGCCAGTAGTGGTTTAGTTTAGGCATGTACTACTAGCTCAGATCTGGTT
TCGGTTCTGTTGTTTGTTTGTTTAGTTTTCCGCGTGTTCCGTTTAATTTTGAGACCTT------ATACTGTTGAAAGCTT
GCTTGGTTTGGTGTAAATTCGAGTGCTAAATGCAGAGTGGTTACAAAGTTT-----------------------------
------CGCGAGCTAAATACAACTAGTTCAGATAGACTAGCCTGAGATGTGAAGTGGGTCATTTACAGTCAGCACTCCGG
TTTACTGAGTAAGTAAGTTCGTGTGTGTGCACCCAAATCGGCCGCATAAATCAGAGGTCTAACAATTGTTCTTCATAACA
TATTTCTAAGCATAC------GAAGTTTCTGG--CTCGGGATTTGAACAGTGTTAATTGGATCTGAAAGAATTCTAACAG
TGGTTCTTCTTATCTGGGTACAGATTATTGCACGACCCTTGAGGGTGATGATTGCTGCAGCTGCTGGGATGCCTATTTTG
AACTCAACAAACTCGAGGTATGCACCGGCACCGCGGCCAAAATCATCTTTTCATAAATCAAAGTTACCAAATTCATCACG
AGCATGCTGCACTCTCG--------------------------------------------------------------C
TTGCGACAATCCAATCCAACTAACCACTCTTCTCCATTTCCCAGCAAGAGCTACCGCAAGAAGAAATTTCAAGGATGGTG
AAGGACTCGCGGTCAGACCCGAGGTACCTTATAAGCAGCATCCACCACCGGTCAGACCTACGGAAGAAGATGGCCGAGAA
AGCTCACAATTCGGCGCCATCAAACTCCCCGGGGCAAACAGCGAAGCCGAGGCCTTTCCCCGTCCCCGACGGGCTGCCGA
AAACGCAGGAAGAGATCGACGAGGATGAGGAGGCCCTCATGCCGGAGTCTCCTTACACGAGGCTGCTCAGAAGGATGGGG
AGGTTTCCCGACTGGTATACCCCTCGCCCAGACCATGAGACCGACTGAATCACGCCATGAACCAGCCTTGCCTTCCAGAT
GTACAGCCTGAAGCTCTGTTCTCCTGGCATCGAGCATGGAACCTTGGATTGCCTGTTGCCTGCTTAGTTGGTTTTTGCTG
AGTGGATAAATGGAACTATGTAATGGTGCGTATGTTTTTGTGGTGTTTAGTTCTTCGCTTTAGATTCAGATAACACCCTT
TTTGCCGTTTTCGTATGATATCTGCT-ATGTATATCTGTATATATATGTTTGGGAATAGAGTTCTTGACTGCTAGTACTT
TGTGTATGTGTTGACTACTACTATTGTCT--GTGTGTGTGTGTCTGTTTGGCTA--------------------------
--------------------------------------TTAATTGTTGGCTGATGAATCTGATA-GAGATTTCTT-GA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TGTCTCTGGATCCA
ATTCTGATGAGCAACCACTAATAACATCTCAAGCCAAACGTCCTTTCCCTTTTGGTGTCTTAGCAAGAGG----ACATAC
TTGAGCCTAGAGCCTGACAAGCTTAACACTAAAGGTCTAAAACACACTGTACAGTACT-ATGTTCCTTCAGTCACATGAA
AGCTCAAAAGGGATTCCTTAGCCGGCTCCCT--------------ACTTACTCTTCCCA-GTAGTTGGCACAGCCCGATA
TTCAGGCACACAATCATCAGGGCTGAATGGTCTAATTGTCATCTGTGCCCTCGCTCTCTCTTTCTCCACGTAATCCGGAT
CATCGAGACCCTAAAGAAAATACAATGCACAAGCAAGCAAAGAACAATCAACCAAGGAACCAACATCATGTTGCTACAAA
TGGTACTATGCTGCCGCATAAGATGTGCCATTCATTACCTGGGTCTCGTAGAAACGCCTTACCCTCCTTTCCTCCTCTTC
CAACTATACAGACATTGAAGTTAATAGTAATGAGCAGAGCAGCAAAATGTTAAACAGCAGCTCGGTAGGGAATGAATAAA
TCGTCGTTATACGTACACTTTCGTCACGGACCGGCAATCCCATATTACCAAACAGAGAACATGCACACTGAGAGCTAGCT
TTAGC
>chr5B_610
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------GCTACGAGGTTTTCGAAGCAGACTCCATTAA
TTTTGAAGATCACAACGGATAAGACGACTCTGTTAGAGTGCCATTTTGTGTACTAATCATCATACTAGCAATTACCATGG
TGACCAGCCATACATGACCCATCTGCTAGAGTTGCTCGAAGGATGTGTGTGCTAAAATTCCATATTAGGAGGTCAAATCG
CAAAAGGGGCTAAAAGTACAATAATATTTCCTGTGACACA---TAGATCTCAGGTTCAGAACCGATCCTTATCCGTTCTA
CTCTTC-----CCCCTTCCTGGTCCTTTAAATAGAAAAAT-CTTCGAGCCAATCCACTCCCCGATACAGCTCCCCCCA-C
CCAAACCCACCGAAGTGAAACCGACGAGACA--GACCAAACACCAAAATGCTCTCATCCACCGCTCTCCGGCCGCTGCCG
CCGGCGACGGCGACGACGCCCGCGTACCCCGCC------------ACTGCCACCGTCACCGCCACCTCGGCCACGCCCGG
GCGGCGCTCGGTTGCGGTGCGCGTGCTGCGGGACTACGGCTCGATCCCCAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCA
TCCTCGACGAGTTCTTCAAGCAGGAGAAGCCTCTCGTCCAGCGCACCAAGGACCAGATCACAGGTACCCTGCTATGATAC
TTCTTCTCTAATTCTCTCTTCCAGTACTACCCAGAGTTCCTAATTTATTACTGTACGTGTTCTT----------------
---------------------------AGCCGACCAGTGGTGGTTTTGTTCAGGCTTCT-----TAGCTTAGATCTGGTT
TCGGTTCTGTAGCTTGCTTGTTTAGTGTTTCGCGTGTTCATTTTAT---------CTT------TTACTGTTGAAAGCTT
GTTTG-TTTGGTGTAAATTCGAGTGCCAGTTTCATGGTGGTAACAAAGTG---------------AAATATGTAGAGTGT
TAATGGCGGGAGCTAAATAGTTTCGGATTAATTTAGCGAGCCTGTTCGA-------------------------------
-----------------------------------------CCGCATAAATCAGAGGTTTAGCAATTGTATTTCATAACA
GATCTCTAAGCTACTGTATAAGAAATTACCGCGTCTCTGAATTTGAACAGTGTTAGTTGGATCTAAAAGAATTCTAACAG
TGGGTCTTCTTATCTGGGTACAGATTATTGCACGACCCTTGAAGGCGACGATTGCTGCAGCTGCTGGGATGCCTATTTTG
AACTCAACAAACTCGAGGTATGCGCCGCGGCT------AAAATCATCTTTTCATAAATCAAAGTTACCAAATTCATCATG
AGTTTTTGACACTACTAGTAGTGTCAAAAACGTTCTTATATTATGGGACGGAGGGAGTACTTAGTACCTTTGCGTGCTAC
TTGCGGCGATCCAATCCAACTAACCACTCTTCTCCATTTCCCAGCAAGAGCTACCGCAAGAAGAAATCTCGAGGATGGTG
AAGGACTCGCGGTCAGACCCAAGGTACCTTATAAGCAGCATACACCACCGGTCGGACCTACGGAAGAAGATGGCCGAGAA
AGCTCACAATTCGGCGCCATCAAACTCCCCGCGGCAAACAGCGAAGCCGAGGCCCTTCCCCGTCCCCGACGGGCTGCCGA
AAACGCAGCAAGAGATCGACGAGGATGAGGAGGCTCTCATGCCGGAGTCTCCTTACACGAGGCTGCTGAGAAGAATGGGG
AGGTTCCCCGACTGGTATACCCCTCGCCCGGACCATGAGACCGACTGAATCACACCATGGACCAGCCTTGCCTTCCAGAT
GTACAGCCTGAAGCTCTGT-CTCATGGCACCAAGCATGGAAGCTTGGATTA-CTGTTGCCTGCTTAGTTGGTTTTTGCTG
AGTGGATAAATGGAACTATGTAATAGTGGTTGT-TTCTTGTAGTGTCGAGTTCTTCTCTTTAGATTCAGATACCTCCGTT
TTTGCTGTTTTTGTATGATATCTGCTAATGTATCTCTGTATATATATGTTTGGGAATAGAGTTCTTGACT----------
-------------ACTAGTACTATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACTACTACTGTCTCT
TGCGTGTGTGTGTGTGTGTGTGTGTGTCTGTTTGGCTGTTAATTGTTGGCTGATGAATCTGATA-GAGATTTCTTTGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TGTCTCTGGATCCA
ATTCTGATGAGCAACCACTAATAACATCTCAAGCCAAACGTCCTTTCCCTTTTGGTGTCTTAGCCACAGGACATACATAC
TTGAGCCTACAGCCTGACAAGCTTAACACTAAAGGTCCAAAACACACTGTACAGTAACCATGTTCCTTCAGTCACATGAA
AGCTCAAAAGGGATTCCATAGCCTTCCACTCGAGCGCCCTACTTA--TTAGTCTTCCCG-GTGGTTGGCACAGCCCGATA
TTCAAGCACACAATCAGCAGGGCTGAACGGTTTGCCTGGCATCTGTGCCCTCGCTCTCTCTTTCTCCACGAAATCCGGAT
CATCGAGACCCTAAACAAAATACAACACACAAGCAAGCAAAGAACAATCAACCAAGGAACCAACATCATCTTGCTGCAAA
TGGTGCTATGCTGCCGCATAAGAAGTGTCATTCGTTACCTGGGTCTCGTAGAAACGCCTTACCCTTCTTTCCTCCTCTTC
CAACTATACACACATTGAAGTTAGT---AATGAACAGAGCAACAGAATGTTAAACAGCAGCTCTGCAGGGAATGAACAAA
CCGTCGTTATACGTACGCTTTCGTCACGGACCGGCAATCCCATATTACCAAATAGAGAGCATGCACACTGAGAGCTTGCT
TTGGC
>chr5A_778
--------------------------------------------------------------------------------
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---------------------------------------------------------------ATTAGGTGGTCATATCG
CAAAAGGGG-TAAAAATACAATAATATTTCCTGTGACACA---TAGATCTCAGGTTCAGAGCCGATCCTTATCCGTTCTA
CTCTTC-----CCCTGTATATAG---------------AAACTTCGAGCCAATCCACTCCCCG-----------------
-CAAACCCACCGAAGTAAAAGCGACGAGACAAGGACCAAACACCAAAATGCTCTCATCCACCGCTCTCCGGCCGCTGTCG
CCGGCGACGGCGACGACGCCCGCGTACCCCGC------------------------CACCGCCACCTCGGCCACGCCCGG
GCGGCGCTCGGTGGCGGTGCGCGTGCTGCGGGACTACGGCTCGATCCCCAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCA
TCCTCGACGAGTTCTTCAAGCAGGAGAAGCCTCTCGTCCAGCGCACCAAGGACCACATCACAGGT--------------A
TCCC-CTCTAATTCCTCTTTGAGTAGGGCAC--GAGTTTCTAATTAATTATTTTTCTCTGAATTTCTTAGTGCATGTGAG
TGTGATGCGGCTTCCTGTCAAGGTTAAAGCCGGCTAGTAATGGTTTAGTTTAGACTTCTG------GCTTAGATCTGGTT
TCGGTTCTGTTGCTTGCTTGTTTAGCGTTTCGCGTGTTCATTTAAT---------TTTGAGACCTTACTGTTAAAAGCTT
GTTTGGTTTGGTGTAAATTCGAGTGCTAATTTCATGGTGGTAACAAAGCAGTATGTAACAAAGTCAAATATATAGAGTGC
TAACGGCGGCAGCTAAATAGTTTCATATTAATTAGT-TAGCCTGAGATGTGAATTGTGTCATTTACAGTCAGCGCTCCAA
TTTAAGTTT------------TGTGTGTGCGTGCCG-------------ATCAGAGTTCTAACAATTGCATTTCATAACA
GATTAAG------CTGTATAAGAAGTTGCCGA--CTCTGAATTTGAACAGTGTTAATTGGATCTAAAAGAATTCTAACAG
TGGTTCATCTTATCTGGGTACAGATTATTGCACGACCCTTGAAGGCGATGATTGCTGCAGCTGCTGGGATGCCTATTTTG
AACTCAACAAACTCGAGGTATGCACCGGCACCGCAGCCAAAATCATCTTTTCATAAATCAACATTACCAAATTCATCATG
AGCATGCTGCACTCTCTGCAAGATAT----------------------------------TTAGTACCTTTGCGTGCTAC
TTGCGGCGATCCAATCCAACTAACCACTCTTCCCCATTTCCCAGCAAGAGCTACCGCAAGAAGAAATCTCAAGGATGGTG
AAGGACTCGCGGTCAGACCCAAGGTACCTCATAAGCAGCATCCACCACCGGTCAGACCTACGGAAGAAGATGGCCGAGAA
AGCTCACAATTCAGCGCCATCAAACTCCCCGGGGCAAACAGCGAAGCCGAGGCCTTTCCCCGTCCCTGATGGGCTGCCGA
AAACGCAGGAAGAGATCGACGAGGATGAGGAGGCTCTGATGCCGGAGTCTCCTTACACGAGGCTGCTGAGAAGGATGGGG
AGGTTCCCTGACTGGTATACCCCTCGCCCAGACCATGAGACTGACTGAATCACTCCATGGACCAGCCTTGCCTTCCAGAT
GTACAGCTTGAAGCTCTGTTCTCCTGGCATCGAGCATGGAAGCTTGGATTG-CTGTTGCCTGCTTAGTTGTTTTTTGCTG
AGTGGTTAAATGGAACTATGTAATGGTGTGTGC-TTCTTGTGGTGTCGAGTTCTTCTCTTTAGATTCAGATAC-------
---------------------CTGCTAATGTATCTCTGTATATATGTGTTTGGGAATAGAGTTCTTGACT----------
-------------ACTAGTACTATTGTGT--GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT----------------
----------------------------------------AATTGTTGGCTGATGAATCTGATAAGAGATTTCTTTAATC
CCCCACCCCCATCCCCAACCCCCAAAATTTTAGTTCTTCCACACATGTTCCATGTTGCATTTATTTTGTAGCGAACACCT
GATGTATTTTCCTCATAGTATGATCTAAACTTTCAAGTGTGAGTTGAAGAGAGTACTCTAATTTTGTTAGGAAGCCAATC
CATCCATCCCAAAACCTGCAGCCTGCTGGTAAAACTTGAAGGAAGCGACATGGTTGTTTGGTTTGTGCTCGCTTTGACCT
GTAAATCCATTCACATCTAAACAGAAGCAGCAAGTGGTTTCGAATTTGAAAGACAGCCAATCAGATTGTCTCTGGATCCA
ATTCTGATGAGCAACCACTAA---CATCTCAAGCCAAACGTCCTTTCCCTTTTGGTGTCTTAGCAACAGA----ACATAC
TTGAGCCTACAGCCTGACAAGCTTAACACTAAAGGTCTAAAACATACTGTACAGTACT-ATGTTCCTTCAGTCACATGAA
AGTTCAAAAGGGATTCCATAGCCTTCCACTTGAGCGCCCTACTTAACTTAGTCTTCCCTCGTAGTTGGCACGGCCCGATA
TTCAAGCACACAATCAGCAGGGCTGAATGGTTTGACTGGTATCTGTGCCCTCGGTCTCTCTTTCTCCACGAAATCCGGAT
CATCGAGACCCTAAACAAAA--------------------AGAACAATCAACCAAGGAACCAACATCATGTTGCTGCAAA
TGGTACTATGCTGCCGCATAAGAAGTGGCATTCGTTACCTGGGTCTCGTAGAAACGCCTTACCCTTCTTTCCTCCTCTTC
CAACTGTACAGACATTGAAGTTAAT---TATGAACAGAGCAACAAAGTGGGAACAAATAAAGTCA---------------
---TCATTATACGTACGCTTTCGTCGCGGACCGGCAATCCCATATTACCAAACAGAGAACATACACACTGAGAGCTAGCT
TTGGC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---S-SS----------
-----------S----SS--S----S----------S---------SS-S----S------------S-SS---SS----
---S-S-S---S--S--SSS-------------------------S--S----------S--S----S-----S----S-
----------S-----------------------------SSS-------------------------------------
S-SSSSSSSSS------------------S------------------------------------------------S-
-S------------------------------------------------------------------------------
-----------S-----------------S---SSSSSSSSSSSS-----S----S-----S------------------
---S--------------------------------------------S-------------------------------
------------------------------------------------------------------S-------------
-----------------------S-----S-----------S-----SSS----SS---------S-------S----S-
-----------------S-------------------------------------S-S-SSSSS-----S----------
------------S---S---------S--S---------SS----SSSSSSSSSS---------S---------------
-S---------------------------S-S--SS-----S-------SS-----------------------------
--------S----------SSSSS--S-S-SS---S-----------------S--S----------------S----SS
----SSSSSSSSSSSSSSSSS---------SSS-SSSSSSS----------------------------SS---------
S----------SSSS------------S-S-S-----S-S------------------------S---------------
------------------------------------------S--S----------------------------------
----------------------------------S-------------------------------------------S-
----------------S---------------------------------------------------------------
-----S-S-----------------------------------------------------------S------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------S------------
-----S-----------------------------------------------S-----S--------------------
-----------------------------------------S---------S----------------------------
----------------------------S--S-S--S---------SS--------S---------------S-S--S--
-----S-----S---------------------S------------------------------------SSSSSSSSSS
SSSSSSSSSSSSS----S---------S---------------S---S--SS-S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------S-------------
---------S----------------------------------------------------------------------
-----------------S-----SS-SS-S--------------------S-------S---------------------
----S-----------S--------------S-S-S--S-------------------------------S---------
---------------S---------SS------------------------------------------------S----
-----------------------S---S-----S-------------------------------S--------------
-------------------------SSS-----S-------S---------------------S-S----------S---
S---------------S---------------------------------------------------------------
--S--
>forward_167
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGGGAGAGTTCAT
ACCGTCG-------------------------------------------------------------------------
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>reverse_1775
--------------------------------------------------------------------------------
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--------------CGAAGTTTCTGGCTCGGGAT----------------------------------------------
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>forward_342
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--TTGGTGATGAGAGCGCCTTT----------------------------------------------------------
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>reverse_2406
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-----TCCCGACTGGTATACCCCTC-------------------------------------------------------
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>forward_452
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--------------------------------TTAGTGGTCACGTCACTCGC----------------------------
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>reverse_2532
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---------------------------------------------------CCTGTTGCCTGCTTAGTTGG---------
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