>input_sequence_54453
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------------------------------------------------------------------------ACCTACAT
ACGCTTCTACAAAGAAAAGAAAGAAACACACACGCGCAGAGAGCTTGTCATTCTCCTATTAGATTAGCCTTCCATGGATC
CAAATGGTTCTTTGACCAAGGATAGAGGATGTTTCACAAGTGACGAGGACTACATTTCGTATGTTTCCCCGTTGCATGAA
GCGCTTAGAGGTACAACCGCGATGCCAACGTTGGAAGAGTTCCAGAAGATG---AACCCAATGCCAATTTCAACTCCTTA
TATGAATAGTGTGTCCATCAACCCAGAGCCCGAAGAGTCCATGTTTCCGTTCGATGAACACTCTATGAATGGACTTGCGC
GTCTTCCACCAGCACTCCCGTCCAGCTCCGTTCTTGTTGCACCACCGGATAGCGCAAGTCCGTTCAAGGACAACTTCACT
GTTAGTCCTTTCGTGGACAACTTCACGGTTAGTCCATCGTTTGGTGTTATCTATAGTAGCACAAACATCATGCATGCATT
GCCCGGTGAGTAAATACTTTGGTTTGCTTGTCTGATGAAATATAGATCTTTACCATGGAGACCCATTCTGCGATCCAAGG
AAGTACGCTTGCCATCATGGATGCCAACCTTAACTCTAGTGGAGTTTTCAATATTTCTCCGGTCTTCGAGTATTCTGAAT
TGCTAGTCTCCAAGGTAAACTCACTACCATTGCCTTTTTTTTC---TATAGTAGGTGTAAACCCAACTGTCTTTCACATC
CAACTATGTGCAGGATCAGAAACCATATACAATCCTAGGGCCATCATCATATGAAGAACTTTGTGGGGTCCTACCACTTG
TCAACCAGACACCTTGTACAGTCCCAGAATCTAACAGTGGGCGAATGGCGATGCACCAAACAATGATGGGTGGCCTAAGT
GTTATGTTTCAACAAAATCCTGCACCCTGTACCATCTCAACAGCGGCTCGACTAAGATTGGATGAGTACACATGTAGGCA
GTGTAACATCAGGTTCAGAACACCACAAGCATATGGTGGCCACATGAGCTACCACAGCAAAATTAATAAAAAGATCCTAC
TTGGATAAGCCATCCTACAATGGTATTGCAGTATTCTCCGGACACTTAAAGGCAGGAGGACAACACAAGGCACTCATGAA
TCTTGACCCAGACTGAAAGGCACCGTCGTCGATGTTAATTTGACTGGTGCATGATGCGCAGTTGTGTCGTGCCCAATTGT
TATCCTATTTATCATAGTTTTTTT-TCGTTTTAGGGATCTAACGTCCCAAGTAGCTTGAACTCATTGTCGAATTGCAATG
AAAATCTACCCAGTCTTTTTTT-----TCATCAAACAAATAAGAATAAT-------------------------------
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>chr2D_1_TraesCS2D01G106700
CAACT---------------------------------------------------------------------------
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-----------------------------------------------------------------TTTGGAAAGTGCAAA
CATTTTTTGAAAACCACAAAAAA--AATTATAATGTGAACAAAAGATGAGAATGGGGAATATTTTGTTAG----------
--------GAAAACATGAACATTTTTTGAGAACACAAACATTTTT-GAAAACACAATTTTTTTAGTAAGGGTGTAAATAT
TTTAAAATTAATGAATTGTTTTAAAAATA----AAATCGAAAAAGGGAAA-AAA-------------AAAGAAGAAACCA
AGGAAAAACAAGAAAATGATACCACCAG-AAATGAAAAACCTAAAAGCTTGGCCTGAACCGGACCAAAACCTTCCAAAAG
ATTTCCATAGCCGGTAAAACCAGGATTCACTTGCTGCTAAATGTGCCGACCCATGTCTGTCGCTCGAGTCACCTATGTGA
AGGGTTGACCATTTGACACAGAGAGCGTCAAATAGGGTTTGCCGTTTAGGTATCCTTACTCGC--CGACTTGTGGCAGTC
TCTTGGACACGTTGAAAGATGAGGCCCATATTGGACAGCCAAATACCGGCCCACAGCCAGCCGAAGGCAATTGAAAATCG
AGAAAGCAAATGTCAACTAT-TGGATGCAAGCCTGAAGGTAATAAATAAATGGCTGAGATCTTCAATATTTTCAGTTACC
GGTCTGATGGACCGCCGGTATCCCTATTTATCCTCTTGCCAAATATAAGTGACGCACGTAGATACCTGCCTGATTTGATA
GC----CATCCGTGAGCACGTGAAGAGAAAGATGGCCTACACGTGCAATATCAAATTGTACAAGGGTGGCGTACTTGTCT
TCTTACATTGTACGGAGCAGTTGATCTTTTTTTTAATACATACTGTAAATAAAAAAGATTTACATTAACAAAATACTTTT
ACACCTTTGTGAATTGTATCTTG-----TAGATTGCAAGCATAATTTGGATCATATATTATAGATACGGCTAATTACTCC
GACGCATGGAAAAACAACTTTCTGTTTCAACATGGTTGCTATAAAGAGCACCCGTACGGTGCTTTAGAAACCACCTACAT
ACGCTTCTACAAAGAAAAGAAAGAAACACACACGCGCAGAGAGCTTGTCATTCTCCTATTAGATTAGCCTTCCATGGATC
CAAATGGTTCTTTGACCAAGGATAGAGGATGTTTCACAAGTGACGAGGACTACATTTCGTATGTTTCCCCGTTGCATGAA
GCGCTTAGAGGTACAACCGCGATGCCAACGTTGGAAGAGTTCCAGAAGATG---AACCCAATGCCAATTTCAACTCCTTA
TATGAATAGTGTGTCCATCAACCCAGAGCCCGAAGAGTCCATGTTTCCGTTCGATGAACACTCTATGAATGGACTTGCGC
GTCTTCCACCAGCACTCCCGTCCAGCTCCGTTCTTGTTGCACCACCGGATAGCGCAAGTCCGTTCAAGGACAACTTCACT
GTTAGTCCTTTCGTGGACAACTTCACGGTTAGTCCATCGTTTGGTGTTATCTATAGTAGCACAAACATCATGCATGCATT
GCCCGGTGAGTAAATACTTTGGTTTGCTTGTCTGATGAAATATAGATCTTTACCATGGAGACCCATTCTGCGATCCAAGG
AAGTACGCTTGCCATCATGGATGCCAACCTTAACTCTAGTGGAGTTTTCAATATTTCTCCGGTCTTCGAGTATTCTGAAT
TGCTAGTCTCCAAGGTAAACTCACTACCATTGCCTTTTTTTTC---TATAGTAGGTGTAAACCCAACTGTCTTTCACATC
CAACTATGTGCAGGATCAGAAACCATATACAATCCTAGGGCCATCATCATATGAAGAACTTTGTGGGGTCCTACCACTTG
TCAACCAGACACCTTGTACAGTCCCAGAATCTAACAGTGGGCGAATGGCGATGCACCAAACAATGATGGGTGGCCTAAGT
GTTATGTTTCAACAAAATCCTGCACCCTGTACCATCTCAACAGCGGCTCGACTAAGATTGGATGAGTACACATGTAGGCA
GTGTAACATCAGGTTCAGAACACCACAAGCATATGGTGGCCACATGAGCTACCACAGCAAAATTAATAAAAAGATCCTAC
TTGGATAAGCCATCCTACAATGGTATTGCAGTATTCTCCGGACACTTAAAGGCAGGAGGACAACACAAGGCACTCATGAA
TCTTGACCCAGACTGAAAGGCACCGTCGTCGATGTTAATTTGACTGGTGCATGATGCGCAGTTGTGTCGTGCCCAATTGT
TATCCTATTTATCATAGTTTTTTT-TCGTTTTAGGGATCTAACGTCCCAAGTAGCTTGAACTCATTGTCGAATTGCAATG
AAAATCTACCCAGTCTTTTTTT-----TCATCAAACAAATAAGAATAATCGAATTGGTTTTTAC-TTGCGATGGAATATG
ATTGTCAATTGTTAAGAATA----ACCCCATAGGGTCCATGTGTGTGTG--------ATAGTGTGGGTATAC-ACTAG--
-ATAATTGCCCGTTCGTTGCAACAGAGCACAAATATTTTATACGCAATCACCGTGATTTATGAGGTATTTTT--ATTGTT
AATGCGATTACATACCAAAAAGGTATTTGAATCGATATTAATTGACTTACCAAAGACAATATTACTTTATTTGGTAAGTC
AATAAGACGTGAGTCAGTTGAGATGATTTTAAGAAAAACTGGGGAGAAAA-TTGACTAAATCAAAAATGAATGGGGAGTG
GTGCGGATGGAGGATGGAAAAAGGATGGACGACAGAACCTTAAGTATTCTTTTAAGTATATATA----------------
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-------------------------TACTACGTATGTGCCCGTGCATTGCCACGGGTCCAAAT-TATTTTAACATAATAA
GAGGACCAAACGAGATAAATCTTGGTGCAAAACAAATAGACGAAATAAGATTATGCTTTGGTCTAAAGCACAAATTTGTA
CCATCTCTTAA---AATGATAAAATAGGTATGTGCACCAAGGCCCCACATGTAAGTCGCGAATATCCACCAAGTCTTGTA
GGAACTCTACCTTCTCATCCTCCTCTTGTGGCCCATACACACATGTGAGCCACCAAGGTTGCTCATCCTCTGGGCATTTA
ACAAGCACCGTTAGTGTATGGTTGGTATAATGCGGGTTTGAGAGTTGAGTTATCGTGACATCCCAGGCCACCAAGATCCC
ACCGCGCGTTCCCAACGCAGGCAAATAGAAAAACTTCTCAAACTTAGCACCGAGGCATTTCCGTACAACGTTTAGTGATA
CATCATGCAATTTTGTTTCTTGGAGACACACAATGGCTGGGCTAGCCTCAGTCACCACCTAGAAAACAACGTTCCGACGG
GCAGGCGCATTATGCCCTCGGACATTCCACACCATCATCCTCAAAGGTTGAATATTCATTACGAGCTCCAACCA
>chr2A_1
CAACT---------------------------------------------------------------------------
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-----------------------------------------------------------------TTTGGAAAGTGCAAA
CATTTTTTGAAAACCAGAAAAAAATAATTATGATGTGAACAAAAGATGAGAATGGGGAATATTTTCTTAGGAAAACACGA
ACACTTTTGAAAATATGAACATTTTTTGAGAACACAAACATTTTTTGAAAACATAA-TTTTTTAGTAAGGGTGTAAATAT
TTTAAAATTAATGAATTATTTTAAAAATA----AAATTGAAAAAAGGAAA-AATGAAAAAACGAAAGAAAGAATAAACCA
AAGAAAAACAAGAAAATGATACCACCAGAAAATGAAAACCCTAAAAGCTTGGCCTGAACCGGACCAAAACCTTCCAAAAA
ATTCCCAAAGTCGGTAAAACCAGGATTCACTTACTGCTAAATGTGCCGACCCATGTCAGTCGCTCGAGTCACCTGTGCGA
AGGGTCGACCATTTGACGTAGAGATCGTCAAATAGAGTTTGCCGTTTAGGTATCCTTATACTCGGGGACTTGTGGCAGTC
TCTTGGACACGTTGAAAGATGAGGCCCATATTGGACAGCCAAGTATCGGCCCACAGCTAGCCGAAGGCAATTGAAAATCG
AGAAAGCAAATGTCAACTAT-TGGATGCAAGCCTGAAGGTAAAAAATAAATGGCTGAGATCTTGAAAATTTTCAATTACC
CGTCTGATGGACCGCCGGTATCCCTATTTATCCTCTTGCCAAATATAAGTGACGCATGCAGATACCTGCCTGATTTGATA
GCCATGCATCCGTGAGCACGTGAAGAGAAAGATGGCGAACACGTGCAGTATCAAATTGTACAAGGGTGGCGTACTTGTCT
TCTTACATTGTACGGAGCAGTTGATCTTTTTTAAATACA------TAAATCAAAAAGATTTACGTTAAGAAAATACGTTT
ACACCTTTGTGAATCGTATCTTCTAGTCTAGATTACAAGCATAATGTGGATCATATATTATAGATACGGCTAATTACTCC
GACGCATGGAAGAACAACTTTCTGTTTCAACATGGTTGCTATAAAGAGCCCCCCTACGCTGCTTTAGAAACCACCTACAA
AGATAGAA-------------------ACACACACACAGAAAGCTTATCATTCTCCTATTAGATTAGCCTTCCATGGATC
CAGATGGTTCTCTGACCAAGGATACGAGATGTTTCACAAGTGACGAGGACTACATTTCGTATGTTTCCCCGTTGCATGAA
GCGCTTAGAGGTACAACCGCTATGCCAACGTTGGAAGAGTTCCAGAAGATGAAAAACCCAATGCCAATTTCAACTCCATA
TATGAATAGTATGCCCATCAACCCAGAGCACGGAGAGTCCATGTTTCCGTTCGATGAACACTCCATGAATGGACTTGCGC
GTCTTCCACCAGCACTCCCGTCCAGCTCGGTTCTTGTTGCACCACCGGATAGCGCAAGTCCGTTCAAGGACAACTTCACC
GTTAGTCCATTCATTGACAACTTCACGGTTAGTCCGTCCTTTGGTGTTA--TATAGTAGCATAAACATCATGCATGCATT
CCCCGGTGAGTAAATACTTTGGTTTGCTTGCTTGATGAAATGTAGATCTTTACCATGGAGACCCATTCTGCGATCCAAGG
AAGTCCGCTTGCCATCATGGATGCCAACCTTAACTCTAGTGGAGTTTTCAATATTTCTCCGGTCTTCGAGTATTCTGAAT
TGCTAGTCTCCAAGGTAAACTCACTACCATTGCCTTTTTTTTCCTCTATAGTAGGTGTAAACCTAACTGTCTTTCACATC
CAACTATGTGCAGGATCAGAAGCCATATACAATCCTAGGGCCATCATCATATGAAGAACTTTGTGGGGTCCTACCACTTG
TCAACCAAACACCTTGTACAGTCCCAGAATCTACCCGTGGGCGAATGGCGATGCAGCAAACAATGATGGGTGGCCTTAGT
GTTATGTTTCAAGCAAATCCTGCACCCTGTACCATCTCAACAGCGGCTCGACTAAGATTGGATGAGTACACATGTAGGCA
GTGTAACATCAGGTTCAGAACACCACAAGCATATGGTGGCCACATGAGCTACCACAGCAAAATTAATAAAAGGATCCTAC
TTGGATAAGCCATCCTACAATGGTATTGCAGTATTCTCCGGACACTTAAAGGCAGGAGGACAACACAAGGCACTGATGAA
TCTTGAGCCAGGCTGAAAGGCAC-GTCGTCGATGTTAATTTGACTGGTGCATGATGCGCAGTTGTGTCGTGCCCAATTGT
TATCCTATTTATCATAGTTTTTTTT--GTTTTAGGGACCTAACGTCCCAAGTAGCTTGAACTCATTGTCGAATTGCAATG
AAAATCTACCTAGTCTTTTTTT-----TCGTCAAACAAATAAGAATAATCAAATTGGTTTTTACTTTGCGATGGAATATG
ATTGTCAATTGTTAAGAATATCTAACCCCATAGGGTCCATGTGTGTGTGTGTGTGTGACAGTGCAAGTATAC-ACTAGAT
AATAATTGCCCGTTCGTTGCAACAGAGCACACATATTTTATACGCAATCATCATGATTTATGAGGTATTTTTC-ATTGTT
AATGCGATTACATATC-AAAAGGTATTTGAATCGATATTAATTGACTTACCAAGGAAAATATTATTTTATTTGGTAAGTC
AATAAGACGCGAGTCGGTTGAGATGATTTTAAGAAAAAATAGTGAGAAAAATTGACTAAATCAAAAATGGATGAGGAGTG
GTGCGGATGGAGGACGGAAAAAGGATGGACGACAGAACATTAAGTATTCTTTTAAGTATATACTCCCTCCGTCCGGAAAA
ACTTATCATCAAAATGGATATAAGGGGATGTATCTAGATGTATGTTAGTTCTAGATACATCTCTTTTTATCCATTTTGAT
GACAAGTATTTTTGGACGGAGGGAGTACTACGTATGTGCCCGTGCGTTGCCACGGGTCCAGATATATTTTAACATAATAA
GAGGACCAAACAAGATAAATCTTGGTGCAAAACAAATAGACGAAATAAGATTATGTTTTGGTCTAAAGCACAAATTTGTA
CCATCTCTTAATAAACTGATAAAATA------------------------------------------------------
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--------------------------------------------------------------------------
>chr2B_1
ATAGATACGGTTAATTACTGTGATACATGCAAGAACAACTTTCTTTTTCAACATGGTTGCTATAAAGGGCCTCCATATGG
TGCTTTAGAAACCGCCTACGTATGCTTCTACATAGAAAGAAACACACATAGAGAGCTTATAATTCTCCTATTAGATTAGC
CTTCCATAGATCCAAATGGTTCTTCGACCAAGGATAGAGGATGTTTCACAAGCGACAAAGACTACATTTCGTATGTTTCC
CCGTTGCATGAAGCGCTTAGAGGTACAACCGCTATGCCAACGTTGGAAGAGTTCCAGAAGACGAACCCAATGCCAATTTC
AACTCCTTCTATGAATAGGGTGCCCATCAACCCAGAGCCCGTACAGTCCGTGTTTCCGTTTAATGAACACTCCATGAATG
GACTTGCACTTCTTCCACCAGCAGTCCCGTCCAGCTCCATTCTTGTTGCACCACATGATAGTGCAAGTCCGTTCAAGGAC
AACTTCACTGGTAGTCCTTTCATGGACAACTTCACGGTTAGTCCATCCTTTGGTGTTATATATAGTAGCATAAACATCAT
GCATGCATTCCCCGGTGAGTAAATACTTTAATTTGCTTGCTTGATGAAATGTAGATCTTTACCATGGAGACCCATTCTAC
GATCCAAGGAAGTCCGCTTGCCATCATGGATGCCAACCTTAACTCTAGTGGAGTTTTCAATATTTCTCCGGTCTTTGAGT
ATTCTGATTGGCTAGTCTCCAAGGTAAACTCACTACCATTGCCTTCTTTTTTTGCTATAGTAGTTGTAAACCCAAATGTC
TTTCACATCCACCTATGTGCAGGATCAGAAGTCATATACAATCCTAGGTCCATCATCATATGAAGAACTTTGTGGGGGTT
CTACCGCCTGTCAACCAGACACCTTGTACAGACACAGAATCTACTTGTGGGCGAATGGCGATGCAGCAAACGATGATGGG
TGGCCTAAGTGTTATGTTTCAACAAAATCCTGCATGATGTACCATCTCAACAGTGGCTCGACTAAGATTGAATGAGTACA
CATGTAGGCAGTGTAACATCATGTCCAGTACAGTAGAGATAAGTATTTTCCTCAGTTAAGAATCAAGATTATCAATCCAA
TAGGAGAACCACGCAACACCACGTGAACAACACATACACATAAAAGAACAAATACTTGCACCCAACACAAACAAGGGGTT
GTCAATCCCTTGGCGGTTAATTGCAAGGATCAAATCTCATAGTGATAGATAGGTAAACAAAAATACAAAATAAAATAACG
ATAAATAAAGTGTAGCAAGGTATTTTTTGAATTTTAATATATGATAAAAATAGACCTGGGGGTCATAGTTTTCGCTAGAG
GCTTCTCTCTTTAACATAGCATATGGTGGGTAAACAAATTAATGTTGAGCAATTGATAGAAAAGCGCATAGTTATGATGA
TATTCAAAGAAATGATCATGTATATAGGAATCACGTACGAGACAAGTAGAGCGGCTCCTGCCTGCATCTACTACTATTAC
TCTACACATCGACCACTATCTAGCATGCATCTAGAGTATTAAGTTCATAAAGAACTGAGTAATGCCTTAAGCAAGAAGAC
ATAATGTAGACAAAGTAAACCCAATCAATATGAATAAATCCCATCTTTTATTATTAATGACAACGATACAAATACGTGTC
ATGTCCCTTTCTGTCACTGGGATTGAGCAACGCAAGATCGAACCCATCACAAAACACGTCTCCCATCACAAGATAAATCA
ATCTAGTTGGCCCAACCAAACCGATAGATCGGATAGAAATACAAAGCTATAATAATCATGCATAAAAGAGTTCGAAGAAG
ACTCAAATAATATATATGAATAATCTAATCATAAACCCACAATTCATGGGATCCCAACAAACACGCCGCAAAGAAGGATT
ACATCGAATAGATCTCCAAGAATATTGAGAAGAACATTGTACTGAAGATCAAAGAGAGAGAAGAAATCATCTAGCTACTA
GCTATGGACCCGTAGGTCTGTGGTAAACTACTCACACATCATCAGAAGGACAACAAGGTTAATGTAGAGGCCCTCCTTGA
TCGATTCCCCCTCCGGAAGAGTACCAGAAAAGGTCTCCAGATGGGATCTCCGCAGAACAGAAACTTGCGAAGGCGGAAAA
TATTTTGGGTGGCTCTCTGATGTATTTGGAATATTTGGAAATTTATAGAGTTGGAATTAGGTCAAGAGGTGCCACGAGGG
GCCCACAATCCTAGGAGCGCCCCCAGGGTGCGCCCTACGGGCTTGTCTCTCCCTCGTGGCTCCGCAGGTCTTCTCACGAA
GCTTCTAGGGTCCCTTCTGCTCCAGAAAAAAGCATTAAAAAGTTTTGTATTGTTTGGACTCCGTTTGGTACAGATTTTCT
GAAAAGCCTAAAAACATGCAAAAAAACAGCAACTGCCATTGTGCATTAGGTTAATAGATTAGTTCCAAAAATGATATATA
ATTGCATAATAACCATCCAAGATTGATACCATAATAACATGGAATAATAATAAAATAGATACGTTGGAGACATATCACTC
TCCTACTGTTTTCGGGGTCCAAAATAAAGAGAACATATGATGATTTCCAAAAAATCATCATAGAAGTTCACACCATGTCG
TCAAAGTGGTGAGATGAACCCCACCTAGTCCGTCATAGAAATAAGAATTGACCCCTTCCCTCTTGAGTACTCTGGTGAAT
TTCACATCGTAAACTATGCCTGAGGTAGCTTCTACCTCACTGGTCTAACGTCATACATTCAATACATGAACCAAATGGTT
TCGCACAACACAACTAATTAATGGGCTCACTTTTCAAACACGTTGGGTCACAGTTGTCGTCCGCACAATGCAAGGAAGCA
ATCTTGCATGTGTATCTTTTTCTTATTGCTTCGGATAATTTGACTTCGTTGATAATGCCCTTGGTAGCCTCAGGCAGGTG
GGTCCATAATGTTAACCTCTACTGAGGAGTTACACACACCAACAATGTGTGGATCTCGCATGTTAGCTTTGGCAGATTGT
CCACAAGATGGCCTTCGGGCAGGCTGCAATGTAGGCTTCTTGTTTAGCCCAGAGGGTGTTCAATGCCTCCAGGTGGCCTC
ATGTAGGTTGTTGTATGCTTCTGATTTGGCTCGGAGCCCCTGGGCCGGGTCTGGACAGAATCTGTTCAGTACTAGGTAGG
GAGCTCCTATTCGACACGTATTCCGTCAAGATGCCTGCCAAACGCAGAGACTTGGTTCTAGGTCGACCCAGTTTGGTCAT
CGTAGCGAGCACTCTTCCTTAGCATTTTCCACAATGCCCTTTTTAACTTTTGATTTTCTGTTTGATTTTCTCGGTTCAAC
TCTTACATTATTTTTCATTTCCTTTAAAATTTAGAACCGACTTTAAAATAAATATGATATAACACAAAATATTTCTTGGG
AACAAAAATATTTTTGAAAATGCAAACTATTTTGGGAACGTGATCTTTTGAAAATGGGAACAACTTTTGGAAAGTGCAAA
CATTTTTTGAAAACCACAAAAAAAT---TATAATGTGAACAAAAGATGAGAATGGGGAATATTTTCTTTGGAAAACACGA
ACACTTTTGAAAACATGAACATTTTTTGAAAACACAAACATTTTTTGAAAACACAATTTTTTTAGTAAGGGTGTAAATAT
TTTAAAATTAATGAATTATTTAAAAAATATATAAAATTGAAAAGGGAAAAGAATGAAAAAACGAAA-AAAGAAGAAACCA
AAGAAAAACAAGAAAATGAAACCACCAGAAAATGAAAAACCTAAAAGCTGGGCCTGAACCAGACCAAAACCCTTCAGAAG
ATTCCCAAAGTCGGTAAAACCAGAATTCACTTGCTGCTAAATGTGCCGACCCATGTCGATCGCTCGGATCGCCTGTGCGA
AGGGTCGACAATTTGACACAGAGGGCGTCAGATAGGGTTTGCCGTCTAGGTATCCTTATACTCGTCGGCATGTGGCAGTC
TCTTATACACGATGAAAGATGAGATCCATATTGGACATCCGAATATCGACCCACAGCCAGCCAAAGGCAATTGAAAATCG
AAAGAGCAAATGTCTCAACTATGGATGCAATCCTGAAAGC---------------GAGATCTTCCAAATTTTCAGTTACC
GGTCTGATGGATCGCCGGTATCCCTATTTATCCTCTTGCCAAATATAAATGACGCACGTAGATACGTGCCTGATTTGATA
GC----CATCCGTGAGCACGTGAAGAGAAAGATGGCGTGCACATGTAATATCAAATTGTACAAGGGTGGCGTACTTGTCT
TTTTACATTGTACGGAGCAGTTATC--TTTTTTTAATACATACTGTAAATAAAAAAGATTTACGTTAACAAAATAGT---
---CCTTTGTGAATCGTATC-----GTCTAGATTGTAGGCATAATGTGGATCATATA-TATAGATACGGCTAATTACTCC
GACGCATGCAAGAACAACTTTCTGTTTCAACATGGTTGCTATAAAGAGCCTCCGTACGGTGCTTTAGAAACCGCCTACAT
ACGCTTCTACATAG-AAAGAAAGAAACACACAC----AGAGAGCTTATCATTCTCCTATTAGATTAGCCTTCGATGGATC
CAAATGGTTCTTCGACCAAGGATAGAGGATGTTTCACAAGCGATGAAGACTACATTTCGTATGTTTCCCCGTTGCATGAA
GCGCTTAGAGGTACAACCGCTATGCCAACGTTGGAAGAGTTCCAAAAGATG---AACCCAATGCCAATTTCAACTCCTTA
TATGAATAGTGTGCCCGTCAACCCAGAGCCCATACAGTCCGTGTTTCCGTTTGATGAACACTCCATGAATGGACTTGCGC
TTCTTCCACCAGCACTCCCGTCCAGCTCCGTTCTTGTTGCACCACCGGATAGCGCAAGTCCGTTCAAGGACAACTTCACT
GTTAGTCCTTTCATGGACAACTTCACGGTTAGTCCATCCTTTGGTGTTATATATAGTAGCATAAACATCATGCATGCATT
CCCCGGTGAGTAAATACTTTAATTTGCTTGCCTGATGAAATCTAGATCTTTACCATGGAGACCCATTCTATGATCCAAGG
AAGTCCGCTTGCCATCATGGATGCCAACCTTAACTCTAGTGGAGTTTTCAATATTTCTCCGGTCTTCGAGTATTCTGATT
GGCTAGTCTCCAAGGTAAATTCACTACCATTGCCTTCTTTTTTTTCTATAGTAGGTGTAAACCCAACTGTCTTTCACATC
CACCTATATGCAGGATCAGAAGTCATATACAATCCTAGGGCCATCATCATATGAAGAACTTTGTGGGGTCCTACCGCCTG
TCAACCAGACACCTTGTACAGTCCCAGAATCTACCTGTGGGCGAATGGCGATGAAGCAAACGATGATGGGTGGCCTAAGT
GTTATGTTTCAACAAAATCCTGCACCCTGTACCATCTCAACAGCGACTCGACTAAGATTGGATGAGTACACATGTAGGCA
GTGTAACATCAGGTTCAGAACATCACAAGCATATGGTGGCCACATGAGCTACCACAGCAAAATGAATAAAAGGATCCTAC
ATGGATAAGCCATCCTACAATGGTATTGCAGTATTCTCCGGACACTTAAAGGCAGGAGGACAACACAAGGCACTAATGAA
TCTTGAGCCAGACTGAA-GGCACCATCATCGATGTTAGTTTGACTGGTGCATGATGCACAGTTGTGTCGTGCCCAATTGT
TATCCCATTTATCATAGTTTATTTTTCGTTTTAGGGACCTAACGTCCCAAGTAGCTTGAACTCATTGTCGAGTTGCAATG
AAAATCTACCCAGTCTTTTTTTTTCGATCGTCAAACAAATAAGAATAATCGAATTGG-TTTTACTTTGCGATGGAATATG
ATTGTGAATTGTTAAGGATATCTAACCCCATAGGGTCCATGTGTGTGTG--------ACAGTGTGAGTATACCACTAG--
-ATAATTACCCGTCCGTATGAT----GCACTAATATTTTATACGCAATCACCGTGATTTATGAGGTATTTTTTTATTGTT
AATGCGATTACATACGAAAAAGGTATTTGAATCGATATTAATTGACTTACCAAAGAAAAATTTGTTTTATTTGGTAACTC
AATAGGACGTGAGTCAGTTGAGATGATTTTAAGAAAAAC-AGTGAGAAAAATCGACTAAACCAAAAATGGATGGGGAGTG
CTGCGGATGGTGGAC-GAAAAAGGATGGACAGCGGAACCTTAAGTATTCTTTTAAGTATA-ATA----------------
--------------------------------------------------------------------------------
-------------------------TACTACGTATGTGCCCATGCGTTGCCAT--GTCCAGATATGTTCTAACATACTAA
GAGGACCAAACTAGATAAATCTTGATGCAAAACAAATAGACGAAATAAAATTATGTTTTGGTCTAAAGCACAAATTTGTA
CCATCTCTTAA---ACTGATAAAATAGGTATGTGC---------------------------------------------
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>SNPs
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-----------------------------------------------------------------S--------------
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-----------------S-------------------S---------------S--------------------------
-S------------------------------------------------------------------------------
---S---S--S----------------------------------------------S----------------S--S--
-----S----------------------------------------------------SS-S------------------
---------------------------------------------S----------------------------------
------------------------------------------S-----------------------S-------------
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------------------------------------S-------------------------------------------
---------------------------------------------------------------S----------------
--------------S-------S----------------------S----------------------------------
-----------S-------------------------------------S------------------------------
-----------S--S------------------S-S----------S---------------------------------
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--------------------S-----------------------------------------------------------
-------------S------------------S------------------------------S----------------
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------------S-------------------------S-----------S----------S------------------
S-----------------------------S----------S--------------------------------------
----S---------------------------------------------------------------------------
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---------------------S----------------------------------------------------------
---------------------------------S-S-------------------S------------------------
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-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------S-----
------S-------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------------S--------------------------------------------------
----------------------------------------------------------S------S--------------
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--------------------------------------------------------S-------S---------------
----------------------------------------S-S--------------------------S----------
--------------S-----------------------------------------------------------------
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---------------------------------------------S--------------S-------------------
-----------S-------------------------------------------S------------------------
---------------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3915
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-------------------------------------------------------TCTGTCGCTCGAGTCACCTA-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_5416
--------------------------------------------------------------------------------
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-------------------------------------------------------CCAAACAATGATGGGTGGCC-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>forward_3918
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----------------------------------------------------------GTCGCTCGAGTCACCTATGT--
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>reverse_5687
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------CCCAGACTGAAAGGCACCG-------------------------------------------------------
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--------------------------------------------------------------------------
>forward_4741
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-CGCTTAGAGGTACAACCGCG-----------------------------------------------------------
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>reverse_6599
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--------------------------------------AAGGCCCCACATGTAAGTCG----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
