>input_sequence_54433
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---------------------------ATGGAGCGCGCCATCATGGCCCTGGCCTTGCTGCTTGCGACACTGGCCGCCTC
CGCTGTGGCCAGCCCCGTCAACAAGTCCTGCGTCACCGGCAGCGCCGGCGCCTCCGTGAGCATCGGATACGGTGGAGCCG
GCGCCAGTGCCGGCGCCGGCGTGTCCCTCGGCGCCGACTGCCCCCGTGCGGAGGAGATCGTCCGCGCGGCCGTCGAGCAG
GCCGTGGCCGCCGACCCCCGCATGGCCGCCTCCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAATGTACGTACTCC
AAGAGCTTCTGGCTGAGCTTCCGG-CGCACGTTCTCTTGTCTCGCCATTGTGAGTGTGTTGCTCTGTTGTTGCTTGTGAT
G-CAGGGCTGCGACGGCTCCGTGCTCCTGGACGACAAGCCGTTCTTCGTCGGCGAGAAGACCGCGGGGCCGAACATCAAC
TCGCTCAGGGGTTTCGAGGTCATCGACGCCATCAAGGCCGAGCTCGAGCAGGAGTGCCCCGAGACCGTCTCCTGCGCCGA
CGTCCTCGCCATCGCCGCCCGTGACTCCGTCGTCGCCGTATGTTACCTTGCT--TTGCTTACTATACACTGGTTAC----
GGCGTACACACTCACGTTTACGATCACTAATGGA-----TGGCCGCCGGCCGGTGCATGCAGTCTGGTGGACCCAGCTGG
GAGGTGGAGACCGGCCGCAAGGACAGCCGCACGGCGAGCCTGCAGGCCGCCAACAGCAACCTCCCGGCGCCGACATCCGG
CGTCGCCACGCTCGTGCAGAAGTTCACCAACGTCGGCCTCACCGCGAAAGACATGGTCGCCCTCTCCGGTACTGTCCCGT
CGT----TGAATCATTGCACATTTTCATGGAGAGAAA--GC----ACGATTGTATATTGTTGTAACGTGCACGATGACGA
TCACAGGCGCGCACACCATCGGGAAGGCACGGTGCACGACGTTCAGCGCGCGACTGGCCAGCGTGGGCGAGTCGGCCAAG
GACACGGGGTTCCTGCAGTCGCTGCAGCAGCTGTGCGCGGGGTCGGCGGGGTCGGCGCTGGCGCACCTGGACCTGGCCAC
GCCGGCCACCTTCGACAACCAGTACTACATCAACCTGCTCTCGGGCGACGGCCTGCTGCCGTCCGACCAGGCGCTGGCGG
CGCCCTCCGGCTCCGGGGCGGAGGTCGACGTCGCAGCGCTCGTGGCCGACTACGCCTTCGACGCGGCCCTCTTCTTCGAC
GACTTCGCGGCCTCCATGCTGCGGATGGGGAGGCTCGCGCCGGCCGGGGGCCGCGCCGCCGGCGAGGTCCGCCGTGACTG
CCGTGTGGTGAACTAG----------------------------------------------------------------
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----------------------------------------------
>chr5B_1_TraesCS5B01G323700
TGTAATTGCGTGTAACTCTTTATATGTTTAGCATTATCATGTGCCCGCTGGACGGTTCACCGACTACGCGCGCTCGTACG
TGCATACGCACTGGTATAGCACTCAACAAGCGCAGAGGAAGCTGCTTGCCTGGAACCTTTCTTGGATCGGTCAGCCTGCA
AAGCGCAACGCATGCATGGCGAACGGCGTGAGCAAGACCCGGTCGCCTCGAG-----TGAAATCTCCCTGCCGCGCGCGA
GTGAT---TCCAAGTTCAAGACATACCACTACCAC---------------------------------------------
--------------------------------------------------------------------------------
----------TGCGACCGATGATGAGCTTCCACCGATCCAAAAAGTGCCCGTCGCTATCCATCCAC----------CTCG
CAGTAAATTTGACCGCTTCATGCGCACACCAGCCCAGACCGTGCATGCAGCTCTCATTGCTCCTGCCTGCTGCCAACCCC
ATCCGGTGAATCATG----ATGCATGCATAGGCATAGCACTCCACTACGTACCGTGCATTCGCAGGATGCAAACATCATC
GTGG------------------------------------CATTTCGTG-TGACCGACATGACCAGGTCGCGCGTGATTA
GCTGCTATACCACGTACTACATGCTTACGGCTACTC----TACCATATGAACTGCAAAAATGTCTTATACTCCCTCCG--
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---------------------------------------TCCGGAAATCTCCAAGTATAGTACGCACTTTGGGCAGCCAT
GGCAGTAGCTTACCAGAACG------------------------TACCATGCAC--------------------------
-----------GGTCACTGGTACTAGCCTACTAGGA--CGACGCCTGCTCCGAAACCAAAACATGCACCATGATTCTCTT
GTACAA---CACATTCCAATGCGTAGCACTGTACGTACACAAGGCCAGAACTTAGGACCGACTATTCCACGGTCACGCAA
GAGGCATGACCAGCTGCCACTTCACCTGCTCCCCCTCTCTTTTCTATATAAACGTGACCGAGACCACATGAATCTCCATC
CTCATCACCATCACCACTAGGTA--CTGGCCAGCAACTGGCGCATAGACTGATCGACCGCGTCACTCGAAGACCACCCCA
GCTGCAGCAGCCTGTCCTGCCACTGCCATGGAGCGCGCCATCATGGCCCTGGCCTTGCTGCTTGCGACACTGGCCGCCTC
CGCTGTGGCCAGCCCCGTCAACAAGTCCTGCGTCACCGGCAGCGCCGGCGCCTCCGTGAGCATCGGATACGGTGGAGCCG
GCGCCAGTGCCGGCGCCGGCGTGTCCCTCGGCGCCGACTGCCCCCGTGCGGAGGAGATCGTCCGCGCGGCCGTCGAGCAG
GCCGTGGCCGCCGACCCCCGCATGGCCGCCTCCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAATGTACGTACTCC
AAGAGCTTCTGGCTGAGCTTCCGG-CGCACGTTCTCTTGTCTCGCCATTGTGAGTGTGTTGCTCTGTTGTTGCTTGTGAT
G-CAGGGCTGCGACGGCTCCGTGCTCCTGGACGACAAGCCGTTCTTCGTCGGCGAGAAGACCGCGGGGCCGAACATCAAC
TCGCTCAGGGGTTTCGAGGTCATCGACGCCATCAAGGCCGAGCTCGAGCAGGAGTGCCCCGAGACCGTCTCCTGCGCCGA
CGTCCTCGCCATCGCCGCCCGTGACTCCGTCGTCGCCGTATGTTACCTTGCT--TTGCTTACTATACACTGGTTAC----
GGCGTACACACTCACGTTTACGATCACTAATGGA-----TGGCCGCCGGCCGGTGCATGCAGTCTGGTGGACCCAGCTGG
GAGGTGGAGACCGGCCGCAAGGACAGCCGCACGGCGAGCCTGCAGGCCGCCAACAGCAACCTCCCGGCGCCGACATCCGG
CGTCGCCACGCTCGTGCAGAAGTTCACCAACGTCGGCCTCACCGCGAAAGACATGGTCGCCCTCTCCGGTACTGTCCCGT
CGT----TGAATCATTGCACATTTTCATGGAGAGAAA--GC----ACGATTGTATATTGTTGTAACGTGCACGATGACGA
TCACAGGCGCGCACACCATCGGGAAGGCACGGTGCACGACGTTCAGCGCGCGACTGGCCAGCGTGGGCGAGTCGGCCAAG
GACACGGGGTTCCTGCAGTCGCTGCAGCAGCTGTGCGCGGGGTCGGCGGGGTCGGCGCTGGCGCACCTGGACCTGGCCAC
GCCGGCCACCTTCGACAACCAGTACTACATCAACCTGCTCTCGGGCGACGGCCTGCTGCCGTCCGACCAGGCGCTGGCGG
CGCCCTCCGGCTCCGGGGCGGAGGTCGACGTCGCAGCGCTCGTGGCCGACTACGCCTTCGACGCGGCCCTCTTCTTCGAC
GACTTCGCGGCCTCCATGCTGCGGATGGGGAGGCTCGCGCCGGCCGGGGGCCGCGCCGCCGGCGAGGTCCGCCGTGACTG
CCGTGTGGTGAACTAG----CTAGCTAGCCAAGGTCAGGTCGATTAA---GCAGAGAAGCTTATCC--------------
-------G--------------TGTGTAGTGGCTTTCAGTTAGTTTGATGTTTTCCATCGCGTTGTGAAATAAGCTGCTA
GATTCTAACTAGGATGATGT------ATGATGATATATGGTGTATCTGGTGATGTGCGGCCTTCTTGGCTTGTCAAAATA
ATTAATTTCACC----TGTTGGAGGTGTTCGGTTGAGTTTTATTGTGCTTTTCTCCGTGTATTCACGTTGGTGAGTGTCA
TGATGATTTCTAGAAAACAAAACAAAAAGAGTTTTGCTATGTCTCTGTCATTTGAGACTTTGTTATGTTTCAGTCGATAG
TATCTTCCTTTAATTTTACAAGGAGATTCGTGTAAAAAATTATTTTCAGTTTTTCTTTTTTCTCCTTACATTCTTTTTGA
ATTAAAACGAAACTTTATTCATTAGAGATAACCATTACATCGTTTTTGAGGATCAGTACAATTTCATTTAGGGGCTCTTC
AAACCAGTCTGAAGTCGAAAAAAATCTAGCTAATCTAGCAAGTTCATGAGCTAA--TATTTGCCTCTCTATTACAGTGTT
CGAATCTAGTCATGACAAAATCACAGGCATAATGAAA-GCAGTCCTCAAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TCCGTCCTGCA----TGGTCTCAATCACTTCCAGA-TTGTCTGAGTTGATGATTATGCGATTACACCCCACCCTTTGCGC
CAGTGTTAGGCCAAATTTGAGTGCTAGAGCTTCAACCATCAGAACATCCGCACAATAGTTTATTTTTCCATTTCCTCCTA
CAATAAACCTACCTTTGTCGTCTCTCAAGACTGCCCCCACCGTACCCTTCAGCATGTCAT--------GATCAAAGGAGG
CATCAACATTGAGTTTCACAAAACCCCTAGG-GGACAGTACCAA-CCCCCCTTTTCATGGACGCCTTTGGAGATGATGCA
TTTACAAAGTTGGATGTGAGTGCTATGATCGCCATTGATATCTAAT
>chr5D_134
--------------------------------------------------------------------------------
-----------------------------------------------------AACCTTTCTTGGATCGGTCAGCCTGCA
----------CATGCATGCCGAACGGCGTGAGCAAGACCCGGTCGCCCCGAGTGAAATGAAATCTCTCTACCGCGCGCGA
GTGATTATTCCAAGTCCAACACGTACGAATACTTTCTCCGTTCTAAATTAGTTGACTTAAATCTGTCTACGTGCGGATGT
ATCTATACTTGTTTAGTGTCTAGATACATTCGTGTCTAGATAAACATGGATCAAGGTAATTGAGAACCAAGGGAGTACGT
ACCACTGCGATGCGAACGATGATGAGCTTCCACCGATAGAGC-AGTGCGCGTCGCGATCGATCGATCGACCTCGCACTCG
CAGTAAATTTGACCGCTTCCTGCACACACACA----------------------------------------CCAACTCC
AGCCCGTGAATCATG----ATATGATGCAT-GCATAGCACTCCACTATGTACCATGCATTCGCAGGATGCAAACATCATC
GTGGATCCGCGGTGGTGCGCATGAATCGGCGCGGTTTCGTCATCTCGTG-TGACCGACAGGACCAGGTCGCCCGCATTTT
ACGATCAGCTTAA-------------------------------------------------------------------
-------------------------GTTTTAACTGAGCTCGACTTTGCCCTTTCATTGTTTTTCTTTAGGGGGGATTGTG
AGCTTAGGGCATCTGCATCCGCGCGCCCCAAACACGCCTCAAACGTCTGGACGGTCCGCCCGATCACGACTCAGTCAGGC
CCATCATACGAGCCCCAAACGCTCGGACTGATCGGCACCCCTCATATCCAACCAAATATGGAGCGGATATGGGGCGCTCA
GGCGCGCCAGCCGACCCCGCTGCATGTCGTAACGGTCCCACCTGCAGCGACTGAAGCTGTGTCCTCTCTTATCGGTGCAC
CCAAATTTTAGTCCCACGTCGCCGGCGCGAGGCAGACGCCGACCAGCTTAAATAGTCGCGCCGGCACATGGCGGCAAGCT
CCTTTGTTGTTGTGTAGGTCTATCAATTCTCCTTGCGTGAGCGAGATAACTTGACACTAGACAACATTTCACTAACTGAT
GATTGTTCGTGGAGTGTCAAGTTTGTCTCATTCATGTATGTTGATACCCCTACTATAGTGACAGTATTTTTTTTTATTTT
GTTCATCGTTTTTTTTCGACAAATTTTAATTTCATAAAAAGCAGTATGGACATGAATGTTTTCCTAGTAAAGAAGATAGA
CGCTGACTATGAATCTTCTATGTGATAAACATATCACATAAGAGATTCATAGTAACAGTCTATCTTCTTTACAAAGAATT
CA-------------------------------------ATGATTTTTTTTTTTTTGAAATCACAAAGAATCCAATGATG
TCAGAAGCCACCCGACTATTTAAACCGGTCGACTAGCTTATCACACGGCGATGGGACTAATACGGGTGTGAGTATGAGCA
AATTTCGGTGTGTTTTGACAGCCCATCCGGCCCAAAACGGACGGGATGATCGTCGTGCACGGCACTGCATGTAATAGGTG
TTTCAGAAATAGGGTATGTGGTTGCAAATGGTAAATTTTGAGGGCTGCCCGGTCACTGTCCGCGGATGTTTGATGGTCTA
GATTTGCAACCTGCGGCTGTAAATGCTCTTACATGTACCGCAATATTCTGAACATGTGCAATATTCTGAACATTAGGCAG
TACCTTTTTGTCTGGCTGCTGCCCTTGCGGCTCTGCTGGCATGGCGTCTCATTACCAACAAACTCGTCTACTTTTCAACT
TTGTGACTTATTTGAGCAG---------GTATGTCTGCCTCTGGTAATCTCCACGTACAGTATGCACTTTAGGCAGCCAT
GGTAGCAGTTTACCAATATCGGAAGCTTAATTAGAACGTACTCCTACCATGCATGCATGCACGCATCCCAATTCCCAAAT
GAT---GAATTGGTCGCACCTGCTACTAGTACCTGGGACGACGTCCGCTCCGAAAGCAAAACATGCACCATGATTCTCTT
GTACTACAACAGATTACAATGAGTAGCGCCCTACGTACACAGGGTCAGAACTTAGGACCAAGGATTCTCTTGT-ACGCAA
GAGGCATGACCAGCTGCCACTTCACCTGCTCTCCCTCTCTTTCCTATATAAAGGTGATGGAGACAAGATGAATCTCCATC
CTCATCACCATCACCACAAGGTA--CTGGCCAGCAACTGGCGCACAGACTGATCGACCGCGTCACTCCAAGACCACCCCA
GCTGCGGTAGCCTGTCCTGCAACTGCCATGGAGCGCGCCATCATGGCCCTGGCCTTGCTGCTTGCGACACTGGCCGCCTC
CGCTGTGGCCAGCCCCGTCAACAAGTCCTGCGTCACCGGCAGCGCCGGCGCCTCCGTGAGCATCGGATACGGTGGAGCCG
GCGCCAGTGCCGGCGCCGGCGTGTCCCTCGGCGCCGACTGCCCCCGTGCGGAGGAGATCGTCCGCGCGGCCGTCGAGCAG
GCCGTCGCCGCCGACCCCCGCATGGCCGCCTCCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAATGTACGTACTCC
AAGAGCTGCTGGCTGAGCTTCC-G-CGCACGTTCTGTAGTCTCGCCATTGTCAGTGTGTTGCTCTGTTGTTGCTTGTGAT
G-CAGGGTTGCGACGGCTCCGTGCTCCTGGACGACAAGCCGTTCTTCGTCGGCGAGAAGACAGCGGGGCCGAACATCAAC
TCGCTCAGGGGTTTCGAGGTCATCGACGCCATCAAGGCCGAGCTCGAGCAGGAGTGCCCGGAGACCGTCTCCTGCGCCGA
CGTCCTCGCCATCGCCGCCCGTGACTCCGTTGTCGCCGTATGTCACCTTGCT--TTCTTATACACTAGTGGTT-ACGGCG
GGCGTACACACTCACGTTAACGATCACTAATGGA-----TGGCCGCCGGCCGGTGCATGCAGTCTGGTGGACCCAGCTGG
GAGGTGGAGACCGGCCGCAAGGACAGCCGCACGGCGAGCCTGCAGGCCGCCAACAGCAACCTCCCCGCGCCGACCTCCGG
CGTCGCCACGCTCGTGCAGAAGTTCACCAACGTCGGCCTCACCGCAAAAGACATGGTCGCCCTCTCCGGTACTGTCCCGT
CGTCGGTTGAACCATTGCACATTTTTTGGGAGAGAAAGTGC----ACAATTGTATATTCTTGTAATGTGCGCGATGACGA
TCACAGGCGCGCACACCATCGGCAAGGCACGGTGCACGACGTTCAGCGCGCGGCTCACCAGCGTGGGCGAGTCGGCCAAG
GACACGGGGTTCCTGCAGTCGCTGCAGCAGCTGTGCGCGGGGTCGGCGGGGTCGGCGCTGGCGCACCTGGACCTCGCCAC
GCCGGCCACCTTCGACAACCAGTACTACATCAACCTGCTCTCCGGCGACGGCCTGCTGCCGTCCGACCAGGCGCTGGCCG
CGCCCTCCGGCTCCGGGGCGGAGG---ACGTCGCGGCGCTCGTGGCCGACTACGCCTTCGACGCGGCCCTCTTCTTCGAC
GACTTCGCGGCCTCCATGCTGCGGATGGGGAGGTTGTCACCGGCCGGCGGCCGTGACGCCGGCGAGGTCCGCCGTAACTG
CCGCGTGGTGAACTAGCTGGCTAGCTAGCTAAGGTCAGGTCGATTAA---GCAGAGAAGCTTAACGTGCTAGCATTGGAT
TTGGGTAGGTCGATCTCTGTATTGTGTAGTGGCTTTCAGTTAGTTTGATGTTTTCCATCGCGTCGTGAAATAAGCTGCTA
GATTCTGACTAGTATGATGT------ATG---TGGAATGGTGTATCTGATGATGTGCGGCGTTCTTGGCTTGTCAAAATA
ATTAATCTCACGTACGTGTTGGAGGTGTTCGGTTGAGTTTTATTGTGCTTTTCTCCGTGTATTCATGTTGGTGAGTGTCA
TGATGTTTTCCAGTAAACAAAACAAAAA----------------------------------------------------
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>chr5A_364
GACCGCTT------------------------------------------------------------------------
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-------------------------------------------CATGCAGCTCTCATTGCT----CCTGCTGCCAACCCC
ATCCGGTGAATCATTGTGCATGCATGCATAGGCATAGCACCCCACTAT-------------------------------C
GTGGATCC---GTGGTACGCATGGATCGGTACGATTTCGTGTGTGACCGATGACATGCATGACCAGGTCGCGCGCGATTA
GCTGCTATTCTACGTACT--ATGCTTACTGCTACGTACAATACCATATGAACTGCAAAAAAAACGTCTTATAGTTTGGGA
CGGAGCTAGTTGCATCTTACGATCGGTTTTAACCGAGCTCGACTTTGCCCCT---TTTTTTTTCTCTAGTGGAAAATGCA
AGCATAGTGTATCTTCTGTGCATGCGGTGCAAGACTCATAATTATTCTTATTATCTCGGGGATGACTTACAATTTATGGG
AAATGATATGCTTCAGCCAGCGGATAGCGCAC------------------------------------------------
GGTGCGTCGACCGCCTCCCCTTCACGCCACGCCGCTCACATGATGCCCAACACAGTTTTGCAACAAGGGTTGCAATGATG
ATGGATCACTGGCGAAGATG------------------------------------------------------------
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---------TTTTTCGCAACAAGGATTAAGTTGCAAACAGAATTTTGCAACAACATCCCGCTTGTTGCAAAGGACTTTAA
AAGTTATTCGCAGGCTTCGCAACAATGTTCATGTTGCGAAGGAGCCTTTTGCAACAATG---TCTTTGTTGCAAAGAATT
GCAACAAATGATTTGCGAAAGGAACAATGATGGGCAAGTATGTCTTTTTTTTCTTTGCGAAAGGAACAATGTAATTACCC
TTTTTTTTCTTTGCGAAAGGAACAATGTAATTATCTACCACGCATTA---------------------------------
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-----------------------------------------------------------------------TTTTCAAGT
TTGTGATTTATTTGAACATGATGGGCAAGTATGTCTACCTCTGGTACTCTCCACGTACAGTATGCACTTTGGGCAGCCA-
---------------GAACT------------------------TACCATGCATGCATGTA-----------TCCCAAAT
GATTTGGAATTGGTCGCACCCACTAGGCCACTAGTCCTCGACGTCTGCTCTGAAACCAAAATATGCACCATGATTCTCTT
GTACAG---CACATTCCAATGAGTAGCACTGTACGTACACAAGGTCAGAACTTAGGACCAAGGATTCCACTGTCACGCAA
AAGGCATGACCAGCGGCCACTTCACCTGCTCTCCCTCTCTTTCCTATATAAACGTGACCGAGACCACATGAATCTCCATC
CTCATCACCATCACCACAAGGTATACTGGCCAGCGACTGGCGCACAGACTCATCGACCGCGTCACTCGAAGACCACCCCA
GCTGCAGCAGCCTCTCCTGACACTGCCATGGAGCGCGCCACCATGGCCCTGGCCTTCCTGCTCGCTGCACTGGCCGCTTC
CGCTGGGGCCAACCCGGTCAACAAGTCCTGCGTCACCGGCAGCGCCGGCGCCTCTGTGAGCATCGGGTATGGCGGAGCCG
GCGCCAGTGCTGGCGCCGGCGTGTCCCTCGACGCCGACTGCCCCCGTGCGGAGGAGATCGTCCGCGCGGCCGTCGAGCAG
GCCGTGGCCGCCGACCCCCGCATGGCCGCCTCCCTCCTCCGCCTCCACTTCCACGACTGCTTCGTCAATGTACGTACTCC
AAGAGCTGCTAACAGAGCTTCC-GGCGCACGCTCTCTAGTCTCGCCATTGTGAGTGTGTTGCCCTCTTGTTGCTTTGCTT
CTCAGGGTTGCGACGGCTCTGTGCTCCTGGACGACAAGCCGTTCTTCGTCGGCGAGAAGACGGCGGGGCCGAACATCAAC
TCGCTGAGGGGGTTCGAGGTCATCGACGCCATCAAGGCCGAGCTCGAGCAGGAGTGCCCCGAGACGGTCTCCTGCGCCGA
CGTCCTCGCCATCGCCGCCCGTGACTCCGTTGTCGCCGTATGTTATACTTCGGCTTGCTTATGATACACTGGTCACGGCG
GGCGTACACACTCACGTTAACCATCACTAATGGATTGGATGGCCGCCGGCCGGTGCATGCAGTCTGGTGGACCCAGCTGG
GAGGTGGAGACCGGCCGCAAGGACAGCCGCACGGCGAGCCTGCAGGCCGCCAACAGCAACCTCCCCGCGCCCACCTCCGG
CGTCGCCACGCTCGTGCAGAAGTTCACCAACGTCGGCCTCATCGCAAAAGACATGGTCGCCCTCTCCGGTAATGTCCCGT
CGT----TGAATCATCGCACATACTTCTGCAGAGAAA--GAAATTACAATTGTATATTCTTGTAATGTGCACGACGACGA
TCACAGGCGCGCACACCATCGGCAAGGCCCGGTGCACGACGTTCAGCGCGCGGCTCGCCAGCGTGGGCGAGTCGGCCAAG
GACACGGGGTTCCTGCAGTCGCTGCAGCAGCTGTGCGCGGGCTCGGCGGGGTCGGCGCTGGCGCACCTGGACCTGGCCAC
GCCGGCCACCTTCGACAACCAGTACTACATCAACCTGCTCTCCGGCGACGGCCTGCTGCCGTCCGACCAGGCGCTGGCCG
CGCCCGCCGGCTCCGGGGCGGAGG---ACGTCGCGGCGCTCGTGGCCGACTACGCCTTCGACGCGGCGCTCTTCTTCGAC
GACTTCGCGGCCTCCATGCTGCGGATGGGGAGGCTCGCGCCGGCCGGCGGCCGTGACGCCGGCGAGGTCCGCCGTAACTG
CCGTGTGGTGAACTAG----CTAC--------GGTCAGGTCGATTAATAAGCACAGAAGCTTAACGTGCTAGCATTGGAC
TTGGGTAG--------------TGTGTAGTGGCTTTCAGTTAGTTTGATGTTTTCCATCGCGTTGTGAAATAAGCTGCTA
GATTCTAACTAGTACTATGATGTATGATG---ATGTATGGCGTATCTGGTGATGTGCGGCGTTCTTGGCTTGTCAAAATA
ATTAATTTC----ACGTGTTGGAGGTGTTCGGTTGAGTTTTATTGTGCTTTTCTCCGTGTATTCATGTTGGTGAGTGTCA
TGATGTTTTCCAGAAAACAAAACAAAAA----------------------------------------------------
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>chr4D_2725
TACTA---------------------------------------------------------------------------
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-----------------------------------------------------------------------TTTTTTTGA
AATAAAATGAAACTTTATTCATTAGTGATAAACATTACATCATTTGTGAGGATCTTTAGAATTTCATTTAGAGGCTCCTC
AAACCAGTCTGAAGTCAAAGAAAATCTAGCTAATCTAGCAAGTTCATGAGCTACTTTATTTGCCTCTCTATTACAATGTT
AGAATCTAGCCGTGACAAAATCACAGGCATGGTGAAA-GCAGTCCTCAAAAATTGCCGCCGCCGCACCCGCTGAGTGTCC
TCCGTCCTGCA----TGGTCTCTATCACCTTCAGA-TTGTCTGAGTTGATGATTATGCGATTACACCCTGCCCTTTGCGC
TAGTGTTAGGCCAAATTTGAGTGCTAAAGCTTCAGCCATCAGAACATCCGCACAATAGTCAATCTTTCCATTTCCTCCTG
CAATTAACCTACCTTTGTCATCTCTCAAGACTGCCCCCACCGTACCCTTCAGCATATCAT--------GATCAAAGGAGG
CGTCAACATTAAGTTTCACAAAACCCCTAGGAGGACAGTACC---CCCCCCCTTTCATGGACGCCTTTGGGGATGATGCA
TTTACAAAGTTGGATGTGAGGGCTACGCTCACCATTGATATCTGAT
>chr6D_2728
ATTTT---------------------------------------------------------------------------
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----------------------------------------------------------------------------TTTA
ATTAAAAGAAAACTTTATTCATTAGAGATAACCGTTACATCGTTTATGATGATCATTACAATTTCATTTAGAGGCTCCTC
AAAATAGTCTGAAGTCAAAGAAAATCTAGCTAATCTAGCAAGTTCATGAGCTACTTTATTTGACTCTCTATTACAATGTT
TGAATCTAGTCATGACAAAATCACATGCATAGTG-AA-GCAGTCCTCGAAAATTGCCACCACCGCACCCGCTGATTGTCC
TCCGCCCTGCA----TGGTCTCTATGACCTCCGAG-TTGTCTGAGTTGATGATTATGCGATTACACCCCGCCCTTTGCGC
CAGTGTTAGGCCAAATTCGAGTGCTAAAGCTTCAGCCATCAGAATATCCGCACAGTAGTCAATTTTTTCATTTCCTCCTG
CAATAAACCTACCTTTGTCATCTCTCAATACTGCCTCCATCGTACCCTTCAGCATGTCAT--------GGTCAAAGGAGG
CGTCAACATTAAGTTTCACAAAACTCCTAGGAGGACAGTACCAGCCCCCCTTTTTCATGGATGCCTTTGGAGATGATGAA
TTTACAAAGTTGGATGTGAGGGCTATGATCCCCATTGATATCT---
>chr7A_2729
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----------------------------------------------------------------------TTTTTTTTGA
AGCAAAACGAAACTTTATT----AAAGATAACCATTACATCGTCTGTGAATATCATTAAAATTTCACTTAGAGGCTCCTC
AAACCAGTCTGAAGTCAAAGAAAATCTAGCTAATCTAGCTAGTTCGTGAGCTACTTTATTCGCCTCTCCATTACAATGTT
CGAATCTAGTCATGACAAAATCACATGCATAGTG-AAATCAGTCCTCGAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TCCTCCTGCGTGGTCT-----CTATCACCTCCAGA-TTGTCTGAATTGATTATTATGTGATTACACCCCGCCCTTTGCGC
CAGTGTTAGGACAAATTTAAGTGCTAAGGCTTCAGCCATCAGAACATCTGCACAATAATCAATCTTTCCATTTCCTCCTG
AAATAAACCTACCTTTGTCGTCTCTCAAGACTGCCCCCACCATACCCTTCAGCATGTCAT--------GATCAAAGGAGG
CGTCAATATTAAGTTTCACAAAACCCCTAGGAGGACTGTACTAGCCCCCCTTTTCATGGAC--CCTTTGGAGATGATGCA
TTTACAAAGTTGGATGTGAGGGCTATGATCGCCATTGATAT-----
>chr3B_2732
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-------------------------------------------------------------------------TTTTTTA
ATTAAAACGAAACTTTACTCATTAGAGATAACCATTACATCGTTTGTGAGGATCAGTACAATTTCATTTAGGGGCTCCTC
AAACCAGTCTGAAGTCAAAGAAAATCTAGTTAATCTAGCAAGTTCATGAGCTACTTTATTTGCCTCTCTATTACAGTGTT
CGAATCTAGTCATGACAACATCACAGACATAGTG-AAAGCAGTCCTTGAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TCCATCCTGCA----T-----CTATCACCTCCAGA-TTGTCTGAGTTGATGATTATGCGATTACACCCCGCCCTTTGCGC
CAGTGTTAGGCCAAATTTGAGTGCTAGAGCTTCAGCCATCAGAACATCCGTACAATAGTCAATTTTGCCATTTCCTCCTA
CAATAAACCTACCTTTCTCGTCTCTCAAGACTGCCCCCACCGTACCCTTCAGCATGTCAT--------GATCAAAGGAGG
CATCAACATTAAGTTTCACAAAACCCCTAGGAGGACAGTATTAA-CCCCCTTTTTCATAGACGCCTTTGGAGATGATGCA
TTTACAAAGTTGGATGTGAGTGCTATGATCGCCATTGATATCTGAT
>chr1B_2732
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-------------------------------------------------------------------------TTTTTGA
ATTAAAACGGAACTTTATTCATTAGAGATAACCATTACATCATTTGTGAGGATCAATACAATTTCATTTAGGGGCTTCTT
AAACCAGTCTGAAGTCAAAGAAAACCTAGCTAATCTAGCAAGTTCATGAGCTACTTTATTTTCCTCTCTATTACAGTGTT
CGAAACTAGTCATGACAAAACCACAGGCATAGTG-AAAGCAGTCCTCAAAAATTGCCGTCGCCGCACCCGCTCATTGTCC
TCCGTCCTGCA----TGGTCTCAATCACCTCCAGA-TTGTCTGAATTGATGATTATGCGATTACAACCCGCCCTTTGCGC
CAGTGTTAGGCCAAATTTGAGTGCTAGAGCTTCAGCCATCAGAACATCCGCACAATAGTCAATTTTTCCATTTCCTCCTG
CAATAAACCTACCTT---CGTCTCTCAAGACTGCCCCCACCGTACCCTTCAGCATGTCATGATCAAAGGATGAAAGGAGG
CATCAACATTAAGTTTCACAAAACCCCTAGGAGGATAGTACCAGCCCCCCTTTTTCATGGACGCATTTGGAGATGACGCA
TTTACAAAGTTGGATGTGAGTGCTATGATCGCCATTGATACCTGAT
>chr1B_2732
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-------------------------------------------------------------------------TTTTTGA
ATTAAAACCAAACTTTATTCATTAGAGATAAACATTACA-CATTTTTGAAGATCATTACAATTTCATTTATAGGCTCCTC
AAACCATTATGAAGTCAAAGAAAATCTAGATAATCTAGCAAGTTCATGAGCTACTTTATTTGCCTCTCTATTACAATGTT
TGAATCTAGTCGTGACAAAATCACAGGCATAGTG-AAAACAGTACTGAAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TCCGTCCTGCA----TGGTCTCTATCACCTCCAGA-TTGTCTGAGTTGATGATTATGCGATTACACGCTGCCCTTTGCGC
TAGTGTTAGGACAAATTTGAGTGCGAAAGCTTTAGCCATCAGAACATCCGCACAATAGTCAAACTTTCCATTTCCTCCTA
CAATGAACCTACCTTTGTTGTCTCTCAAGAGTGCCCCCACTGTACCCTTCAGCATGTCAT--------GATCAAAGGAGG
CATCAACATTAAGTTTCACAAAACCCCTAGGAGGACAGTACCAG-CCCCCCTTTTCGCGGACACCTTTGG-GATGATGCA
TTTAAAAAGTTGGATGTGAGGGCTATGA-CGCCATTGATATCT---
>chr3A_2732
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-------------------------------------------------------------------------TTTTTTA
AACAAGACGAAACTTTATTCATTAGAGATGACCATTACATCGTCTATGAGTATCATTACAATTTCACTTAGAGGCTCCTC
AAACCAGTCTGAAGTCAAAGAAAATCTAGCTAATCTAGCTAGTTCGTGAGCTACTTTATTTGCCTCTCTATTACAATGTT
CGAATCTAGTCATGAAAAAATCACAGGCATAGTG-AAAGCGGTCCTCGAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TCCGTCCTGCA----TGGTCTCTATCACCTCCAGA-TTGTCTGAGTTGATTATTATGCGATTACACCCCGCCCTTTGCGC
CAGTTTTAGGCCAAATTTGAGCGCTAAGGCTTCAGCCATCAGAACATCTGCACAATAGTCAATCTTTCCATTTCCTCCTG
CAATAAACCTACCTTTGTCGTCTCTCAAGACTGCCCCCACCATACCCTTCAACATGTCAT--------GATCAAAGGAGG
CATCAACATTAAGTTTCACAAAACCCCTAGGAGGACAGTACCAG-CCCCCTTTTTCATGGACGACTTTGGAGATAATGCA
TTTACAAAGTTGGATGTGAGGGCTATGATCGCCATTGATAT-----
>chr7D_2732
TTTTTG--------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
AATAAAACGAAACTTTATTCATTAGAGATAACTGTTACATTGTTTGTGAGAATAATTACAATTTCATTTAGAGGCTCCTC
AAAATAGTGTGAAGTCAAAGAAAATCTAGCTAATCTAGCAAGTTCATGAGCTACTTTATTTGCCTCTCTATTACAATGTT
CGAATCTAGTCATGACAAAATCACATGCATAGTG-AAAGCAGTCCTCGAAAATTGCCGCCGCCGCACCCGCTGATTGTCC
TACGTCCTGCA----TAGTCTCTATCACCTCCAGG-TTGTCTGAATTGATGATTATGCCATTACACCCCGCCCTTTGCGC
CAGTGTTAGGCCAAATTTGAGTGCTAAACCTTCAACCATCAGAACATCCGCACAGTAGTCAATTTTTCCATTTCCTCCTG
CAATAAACCTACCTTTATCGTCCCTCGGTACCG-CTCCATCGTACCCTTCAGCATGTCAT--------GATCAAAAGAAG
CGTCAACATTAAGTTTCACAAAACCCCTAGGAGGACAGTACCAACCCTCCTTTTTCATGGACGCCTTTGG--ATGATGCA
TTTACAAAATTGAATGTGAGGGCTATGATCCCCATTGATATCTGAT
>chr6A_2740
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-TTAAAATGAAACTTTATTCATTAGAAATAACCATTATATCGCTTGTGAGGATCATTACAATTTCATTTAGAGGCTTCTC
AAACTAGTCTGAAGTCAAAGAAAATCTAGCTAATCTAGCAAGTTTATGAGCTACTTTATTTGTCTCTTTATTACAATGTT
CGAATCTAGTCATGACAAAATCACATGCATAGTG-AAAGCAGTCCTCGAAAATGGCCGCCGCCGCACCCGCTGATTGTCC
TCCGTCCTGCA----TGGTCTCTATCACCTCCAGAATTTTCTGAGTTGATGATTATGCGATTACACCCCGCCCTTTGCGC
CTGTATTAGGCCAAATTTGAGTGCTAAAACTTCAGCCATTAGAACATCCGCACAATAGTCAATCTTTTCATTTCCTCCTG
CAATAAACCTACCTTTGTCGTCTCTCAAGACTATCTCCACCGTACCCTTCAGCATGTCAT--------GATGAAAGGAGG
CGTCAACATTAAGTTTCACAAAACCCCTAGAAGGACAGTACCAGCCCCCCTTTTTCATGGACGCCTTTGGAGATGATGCA
TTTACAAAGATGGATGTGAGGGCTATGATCACCATTGATATC----
>SNPs
-S-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
SSSSSSSSSS--------S----------------------------S------------------S--S----------
---------------S---S--S---S-S---SSS---------------------------------------------
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---------------S---------------------SS-SSS-----S------S---S---S-S--------------
-------------------S---S-----SSSSSSSSSSSSSS------------------SSSS---------------
-----------------------------------------------S-----S--------------------------
--------------------------------------------------------------------------S-----
--------S-S-------SS--------S-----SS------------------------SSS-S-S-SS-SSS-SS---
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-----------------------------------------S--S--------S---S----S-----------------
--S--S--S----------S---------------------------------S--------------------------
---------------S-SSS------S-S------S-------S------------------------------------
---------------------S----------------------S--------------S-SS-------S---------
-------------------------------S----------S-------------------------------------
-----------------S--------------------------S-----------------------------------
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-------S--------------S--------------S------------------------------------------
-------S-----------------------------------------------------S------------------
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------------------------------S------------------------------SS----------S------
------------------S-------------------------------------------------------------
-----------------------------------------------------------------S--------S-----
---------------------------------------------S----------------------------------
-------------------------SS--------------------S----------S------S--------------
----------------------S-----------------------------S--S------------------------
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------------------------------------------S-----------------------------------S-
------------------------SSS-------S---------------------------------------------
-----------------------------------------------S-----S-S-------------------S----
-----------------------------S---------------------------------S-S--------------
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------------S----------------SSS--S-------------------------S-------------------
-----------S-----------------------------------------------------S--------------
-----S----S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-------
-----------------------------------------------------------------------------S--
----------------S--S---------------------------------S--------------------------
-------------------------------S------------------------------------------------
----------------------------S----------------------------------------S----------
-----------------------------------------------------------SS-------------------
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----------S---------------------------------------------------------------------
-------------------------------------------S--
>forward_542
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------------------------------------------GCATGCAGCTCTCATTGCTC------------------
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>reverse_3836
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---------------------------------------------------------------------------GACTG
CCGTGTGGTGAACTA-----------------------------------------------------------------
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>forward_2189
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---------ACGGTCACTGGTACTAGCCT---------------------------------------------------
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>reverse_3904
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---------------------------------------------------------------TCCGTGTGTAGTGGCTT
TCA-----------------------------------------------------------------------------
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----------------------------------------------
