>input_sequence_54390
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------------------------------------------------------------ATGGCCGACGGCGTCCTTC-
-----------CGGCAGCGCTGACAGTGGCGTTCCTGCTGCTCCTTGGAACAATCAGCGCCGCGCACGGTCAGCTCCAGA
CGGGGTTCTACTCCGACTCCTGCCCCGGCGCCGAGGACATCGTCACCGCCGCCGTCCAGGAAGCCGCCGCCTCGGACGCC
ACCATCCTCCCCGCCCTCGTCCGCCTCCAGTTCCACGACTGCTTCGTCAGAGTGAGCGCAGATAGCTCGGCTGAATGGCC
GATGCAGTTAGCTGCGTCGAGATGTCAGGGTAGCAGCG-----------AGTGAGTGATTTAGGTGCGTGGCTGCTGCAG
GGATGCGACGCGTCGGTGCTGATCACGAGCGCGGGCAGCGCCGCGGAGGTGAACAACAACAAGCACCAGGGCCTCCGCGG
CCTGGACGTGGTTGACCGCGCCAAGGCGGAGCTCGAGGAGCAGTGCCCCGGGGTCGTCTCCTGCGCCGACATCATCGCTC
TCGCCGCACGCGACGCCATAGCCATGGTACGTACGTCATGTTAACACGAGGTGTTCGACTCGTGCCGCATGCAGGCTGTG
TTTGTCTGTAGTCTTGTCGGGAACTCGTGATGCGTGGTGAGTGCCACTGACGATCGAGATGCTGCTTGTATTTGTCTGAC
GCGCGCCATGGCAGACGAACGGGCCGTCGTTCGAGGTGCCGACGGGGCGGCGCGACGGGCTGTCGTCGAACGTACGCGAC
GCCGACGTGCTGCCGGACGTGAGCGACTCCATACAGGTGCTCCGCTCCAAGTTCGCCGCCAGCGGCCTCAACGACCGCGA
CCTCGTTCTGCTGACAGGTACGTACCCCACTTACATACTAGTACTCCGCGA-CATGCACGTCATACGCTGACACGCGACG
GCGTCCTCCGCCGCGACATGCATACGCAGCGGCGCACACGATCGGCACGACGGCGTGCTTCTTCGTCAAGGACCGGCTCT
ACAGCTACCCACTGCCGGGCGGCCGCACGGGGTCGGACCCGTCGATCCCGGCGGCGTTCCTGTCGGAGCTCAAGGCCCGG
TGCGCGCCCGGCGACTTCAACACGCGCGTGCCGCTGGACCGGGGCAGCCAGGGCACATTCGACGACTCCATCCTCCGCAA
CATCCGCGCGGGCCTCGTCCCCATCGCCTCCGACGCGGCGCTCGAGGCCAGCAATGCCACCGGCGCGCTCGTCGGCGCCT
ACCTCGGCGCGGCGTCCTCCAGCTTCGCGCAGGATTTTGTCGGCGCCATGATCAAGATGGGCGCCATCGGCGCCATCACC
GGCGACGCCGGGGAGATCAGAGACGAGTGCTCGGCGTTCAACACGAACTGA-----------------------------
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-------------------------------
>chr2D_1_TraesCS2D01G352500
GAGTTACTCGACAATGGAGGATGAGTTGTTGTGCGATTCGTGGCTGGCCGTATCCATGGATTTCGTAGGCAGGAACAGAG
GGGAGCCCTTCTGGGAGCAAGTGCGTGAAAAGTTTCACGCACGAAAGAACATTGCGCCCTACGACATGTACATCATTCAA
CCACGCAATGTGAAGTCGTTGTCGTGTCGCTGGCACGCTATCCAGATTAGCGTCACCAAG--TTTTGCGATATGGTTCGT
CAGCTCGAGGCAAGGTGACCATTGCACGTGGCAGAGGACGAGATTGTAAGTGCTACTTCCTCTTGCTGAACTTGTTGATT
GATTCATTCACTCAATATTGGTCTACACGCCATATGTAGCCCGCACACGCTGCTGTGGTGTACCACAAGACAGAGGGACG
AGTATTTACGT--A--CACAC-TGTTGGATGAAGCTGAAGGGGCAGTATGTGTGGGACGACATGATCCGTTAATGAAAAA
CTTGTTGGACATCTGATTAATCTAGTCGAATTTGAGACATTGTTGTACTAGACTTA-TTTGCATGTTACATGTGGATGAT
TTGTGCTTTTTTTATCC-GAATTTCGATGAATATCGGCCGGTTTGCATAAGTTTTGTCCGGTTAGTTAAAATGC-GG---
--AATGTATGCGGCTATAATTGAATGGCGTCCTCCCACATCCAGCCAGCTGATTAGAGTCCTTTTCTGCAAATAAGAAAT
GTGGCCTCCTCACCAGAACCTTGGGCTTCATTCCGGTTCGGGCTGAGACGTCTTCAATCCGACACGCCCTTAATCTCGTC
TTCATT--CCAACTTAAACGCATTCGTGGTAGAGCATCACACTCACACAGCGCTGAAGACAGGCTCCCCATACTGACAGC
CAGCAGTGCCCAGAT---TAAGCTCTATAAATGAAATTAGCCCTCATTTATGCAACTCCCCATCACTTGCTCTATCCCGA
GTTAGTGACACAAGAATATTTCCCTGTGCAGTGTTGTGCTAGCTGCCGTGTCTGCCAGGAATGGCCGACGGCGTCCTTC-
-----------CGGCAGCGCTGACAGTGGCGTTCCTGCTGCTCCTTGGAACAATCAGCGCCGCGCACGGTCAGCTCCAGA
CGGGGTTCTACTCCGACTCCTGCCCCGGCGCCGAGGACATCGTCACCGCCGCCGTCCAGGAAGCCGCCGCCTCGGACGCC
ACCATCCTCCCCGCCCTCGTCCGCCTCCAGTTCCACGACTGCTTCGTCAGAGTGAGCGCAGATAGCTCGGCTGAATGGCC
GATGCAGTTAGCTGCGTCGAGATGTCAGGGTAGCAGCG-----------AGTGAGTGATTTAGGTGCGTGGCTGCTGCAG
GGATGCGACGCGTCGGTGCTGATCACGAGCGCGGGCAGCGCCGCGGAGGTGAACAACAACAAGCACCAGGGCCTCCGCGG
CCTGGACGTGGTTGACCGCGCCAAGGCGGAGCTCGAGGAGCAGTGCCCCGGGGTCGTCTCCTGCGCCGACATCATCGCTC
TCGCCGCACGCGACGCCATAGCCATGGTACGTACGTCATGTTAACACGAGGTGTTCGACTCGTGCCGCATGCAGGCTGTG
TTTGTCTGTAGTCTTGTCGGGAACTCGTGATGCGTGGTGAGTGCCACTGACGATCGAGATGCTGCTTGTATTTGTCTGAC
GCGCGCCATGGCAGACGAACGGGCCGTCGTTCGAGGTGCCGACGGGGCGGCGCGACGGGCTGTCGTCGAACGTACGCGAC
GCCGACGTGCTGCCGGACGTGAGCGACTCCATACAGGTGCTCCGCTCCAAGTTCGCCGCCAGCGGCCTCAACGACCGCGA
CCTCGTTCTGCTGACAGGTACGTACCCCACTTACATACTAGTACTCCGCGA-CATGCACGTCATACGCTGACACGCGACG
GCGTCCTCCGCCGCGACATGCATACGCAGCGGCGCACACGATCGGCACGACGGCGTGCTTCTTCGTCAAGGACCGGCTCT
ACAGCTACCCACTGCCGGGCGGCCGCACGGGGTCGGACCCGTCGATCCCGGCGGCGTTCCTGTCGGAGCTCAAGGCCCGG
TGCGCGCCCGGCGACTTCAACACGCGCGTGCCGCTGGACCGGGGCAGCCAGGGCACATTCGACGACTCCATCCTCCGCAA
CATCCGCGCGGGCCTCGTCCCCATCGCCTCCGACGCGGCGCTCGAGGCCAGCAATGCCACCGGCGCGCTCGTCGGCGCCT
ACCTCGGCGCGGCGTCCTCCAGCTTCGCGCAGGATTTTGTCGGCGCCATGATCAAGATGGGCGCCATCGGCGCCATCACC
GGCGACGCCGGGGAGATCAGAGACGAGTGCTCGGCGTTCAACACGAACTGATCGA-----CATTCCTATAAT-TCATACG
AATGATCGCATTCAAATT---ACTGTAAATCTCTCGCGGAAACATGAATTCATTCAGATGAAATGAAGTAAATTGGCATG
ATTTTTTCAGTACTCCAATATTGATAATCGAGCATAGTGGTGGGATTAAGATTGCATTTTCATCGGATAGATGGACGAGT
TGTTAACAG-------CGTGTTTCATTTCTAGTGGCAAGAACATGCAGCAGTTAATGTGCAATGCAAAAGAAAAGAAAAC
TCGCAGGAAAGATGAGAATGGGAGTACGTACTCCGGATTAATAAGTAGCGGCGTGTTGGTTTGAGCTGTCTATATTCGGT
GCCGATTTAATGTTCTCAAGGAGAATACGGCGCC----CATGCATGTGACTGCACTGTGTACTTTTTTTTTGCGGACAGA
ACTGTGTACTCCAACTGCGTGTCAAGCAACTCTAGCAGACCCCGCATCCGGCGCAAACCCGCATAATTCCGATGATTATA
CGAGCTTGGCCCATTTTTCTGGCCAGACCAGAGCCCGCATCGGTGTCCGGCCCGTAAATTTTTTGCCGCAGCACGCAAAC
GGAACCCCCGAGCCACTATAATTGCGGTTTTGCGGGTAGGTGTGGGTCGAAACCCTATCCTCCCGCAGCCGCGTTCCCTT
CCAATTCCCCACTGCGCCGCTCGATTTCTCGCCCCCGGCGAGCCTTGAACCATCATGGCCGACTCGGGGATGAGGCGGAG
CGCCGCCGCCGCGCCAGATCTGACGTCGCGCGCAAGCGGGGGGCGCGTCGGTGGCTCAACCACGGTGCCCGGCCGCCGCC
GGCATTCAACCGGCGCGAGCTCGACGAGTTTGAGCTCGAGCGCGCCCGCTGCCGTCGCGCCTCCTCCGAGTGAACTTATT
ATGCGAAGAAGAACCATCTATGCGAGCGAGCTCCGGCGAGCTGCTGCTTAAATTTCTCGCGCGAAACAACTTTTTTAAAA
AAAATAGGGGTTTGTTTGTGGTTTCTAGTCT
>chr2A_1
GAGCTACTCGACAATGGAGGATGAGTTGTTGTGCGATTCGTGGCTGGCTGTATCCACGGATTTCGTAGGCAGGAGCAGAG
GGGATCCCTTCTGAGAGCAAGTGCATGAAAAGTTTCACACATAAAAGTACATTGCGCCCTATAACATGTACATCATTCAA
CAATGCAATGTGAAGTCGTTGTCGTATCGCTGGCACGCTATCTAGATTTGCGTCACCAAG--TACTGCAACATGGTTCGT
CGGCTCGAGGCAAGTTGGCCATTGCACGCGGCAGAGGACGAGATCGTAAGTTTTACTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTCAACATTGGTCTACACGTCATATGTAGTCCGCACGCGTTGTCGTGGTGTATCACAGGACAGAGGAACG
GGTATTTACGTACA--CACAC-TGTTGGATGAAGCTGAAGGGACAGTATGCATGGGACGACATGATCCGTTGATGAAAAA
CTTGTTGGACATCTGGTTTATCTAGTCGAATTTGAGACATTGCTGTACTAGACTTA-TTTACATGTTACGTGTGGATGAT
TTATGCTATTTTTTATC-GAATTTCGATGAATATGGGCCGGTTTGCATGAGTTTCCTTCGGTTAGTTAAAATAC-GG---
--AACG------------------TGGCGTCCTCCCGCATCCAGCCAGCTGATTAGAATCATTTTCTGCAAATAA-----
------------CCAGAACCTTGGGCTTCATTCCGGTTGGGGTTGAGACGTCTCCAATCCGACACGCCCTTAATCTCGTC
TTCATT--CCAACTTAAACGCATTCGTGGTAGAGCATCACACTCACACAGCGATGAAGACAAGCTCCCCATACTGACAGC
CAGCAGTGCCCAGAT---TAAGCTCTATAAATGAAATTAGCCCTCATTTATGCAATTCCCCATCACTTGCTCTATCTCGA
GTTAGTGACACAGGAATATTTCCCTGTGCAGTCTTGTGCTAGCTGCCGTGTCTGCCAGGAATGGCCGACGGCGTCCTTCT
GACAACCGCGCCGGCAGCGCTAACACTGGTGTTCTTGCTGTTCT---------TCGGCGCCGCGCACGGTCAGCTTCAGA
TGGGGTTCTACTCCGACTCCTGCCCCGGCGCCGAGGACATCGTCACCGCCGCCGTCCAGGAAGCCGCCGCCTCGGACGCC
ACCATCCTCCCCGCCCTCGTCCGCCTCCAGTTCCACGACTGCTTCGTCAGAGTGAGCGCAGATAGCCAGGCTGAATGGCC
CATGCAGTTAGCCGTGTC--GATGTCAGGGTAGCAGTG-----------AGCGAGTGATTCAAGTGCGTGGCTGCTGCAG
GGATGCGACGCGTCGGTGCTGATCACGAGCGCGGGCAACGCCGCGGAGGTGAACAACAACAAGCACCAGGGCCTCCGCGG
CCTGGACGTGGTTGACCGCGCCAAGGCGGAGCTCGAGGAGCAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCATCGCTC
TCGCCTCACGCGACGCCATAGCCATGGTACGTACGTCATGTTAACACGAGGTGTTCGACTCGTGCCGCATGCACGCTGTG
TTTGTCTGTAGTCTTGTCGGGAACTCGTGATGCGCG----GTGCCACTGACGATCGAGATGCTGCTTGTCTTTGTCTGAC
GCGCGCCATAGCAGACCAACGGGCCGTCGTTCGAGGTGCCGACGGGGCGGCGCGACGGGCTGTCGTCGAACGTGCGCGAC
GCCGACGTGCTGCCGGACGTGAGCGACTCCATCCAGGTGCTCCGCTCCAAGTTCGCCGCCAGCGGCCTCAACGACCGCGA
CCTCGTTCTCCTCACAGGTACGTACATCGCTCACGTAGTGCGTACGCGCGCGCATGCACGTCACACGCTGACACGCGACG
GCGTCCTCCGCCGCGACATGCAAATGCAGCGGCGCACACGATCGGCACGACGGCGTGCTTCTTCGTCAAGGATCGGCTGT
ACAGCTACCCACTGCCGGGCGGCCGCACGGGGTCGGACCCGTCGATCCCGGCGGCGTTCCTGTCGGAGCTCAAGGCCCGG
TGCGCGCCCGGTGACTTCAACACGCGCGTACCGCTGGACCGCGGCAGCCAGGGCACGTTCGACGACTCCATCCTCCGCAA
CATCCGCGCGGGCCTCGTCCCCATCGCCTCCGACGCGGCGCTCGAGGCCAGCAACGCCACCGGCGCGCTCGTCGGCGCCT
ACCTCGGCGCGGCGTCTTCCAGCTTCTCGCAGGATTTTGTGGCCGCCATGATCAAGATGGGCACCATCGGCGCCATCACC
GGCGACGCCGGGGAGATCAGAGACGAGTGTTCGGCGTTCAACACGAACTGATCGACACGTCATTCCTATAAT-TCATACG
AATGATCGCATTCATATT---ACTGTAAATCTCTCGCGGAAACATGAATTCATTCAGATAAAATTAAGTAAATTGGCATG
ATTTCTCCTCTGTAT---------------------GTGGTGGGATTTAGATTGCATTTTCATCGGATTGACGGACGAGT
TGTTAACAA-------CGTGTTTGATTTCTAGTGGCAAGAACATGCAGCAATTAATGCGCAATGCAAAGGAAACAAAAA-
TCGCAGAAAAGATGAGAATGGGAGTACGTACTCCGGAT---TAAGTAGCGGCGTGTTGGTTTGAGCTGTCTATATTCGGC
GCCGATTTAATGTTCTCAAGGAAAATATGGCGCCCATGCATGCATGTGATTGCACTGTGTACT-----------------
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-------------------------------
>chr2B_1
GAGTA-CTTGACAATGGAGGATGAGTTGTTGTGTGATTCGTGGCTGGCCGTATCCACGGATTTCGTAGGCAGAAGCAGAG
CGGATCCCTTCTGGGAGCAAGTGCATGAAAAGTTTCACGCACGAAAGCACATTGCGCTCTACGACATGTATATCACTCAA
CCACGCAATGTGAAGTCGTTGTCGTATCGCTGACACGCTACCTACATCAGCGTCACCAAG--TTTTGCGACATGGTTTGT
CAGCTTGAGGCAAGGTGGCCATTGCATGCGACAGAGGACGAGATCGTAAGTTTTACTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTCAACATTGGTCTACACGTTATATGTAGCCCGCACGCGCTGTCATGATGTATCACAAGACAGAGGGACA
GATAGTTACGTACA--CACAC-TGTTGGATGAAGCTGAAGGGGCAATATTTATGGGATAACATGATCCGTTGATGAAAAA
CTTGTTGGAT------TTAATCTAGTCGAATTTGAAACATTGTTGTACTAGACTTA-TTTGCATGTTACGTGTGGATGAT
TTGCGCTATTTTCTATCCAAATTTCGATGAATATCGGCCGGTTTTCATGAGTTTCGTTCGGTTAGTTAAAACAC-GG---
--AATG------------------TGGCGTCCTCCCGCATCCAGCCAGCTGATTAGAATCGTTTTCTGCAAATAAGAAAT
ATGGCCTCCTCA-CAGAACCATGGGCTTCATTCCGGTTCGGGCTGAGACGTCTCT--TCCGACACGCCCTTAATCACGTC
TGTATCCGCCAACTTAAACGCATTCGTGGTAGAGCATCACACTCACACAGCGCTGAAGACAAGCTCCCCATACTGACAGC
CAGCAGTGCCCAGATTAATAAGCTCTATAAATGAAATTAGCCCTCATTTATGCAACTCCCCGTCACTTGCTCTATCCCGA
GTTAGTGACACAAGAATATTTCCCTGTGCAGTCTTGTGCTAGCTGCCGTGTCTACCAGGAATGGCCGACGGCGTCCTTC-
-----------CGGCAGCGCTGACAGTGGCGTTCCTGCTGCTCCTTGGAACAATCGGCGCCGCGCACGGTCAGCTCCAGA
TGGGGTTCTACTCCGACTCCTGCCCCGGCGCCGAGGACATGGTCACCGCCGCCGTCCAGGAGGCCGCCGCCTCGGACGCC
ACCATCCTCCCCGCCCTCGTCCGCCTCCAGTTCCACGACTGCTTCGTCAGAGTGAGCACAGATAGCTGGGCTGAATGGCC
GATGCAGTTAGCCGTGTC--GATGTCAGGGTAGCAGCTGCAGAGCCTGCAGTGAGTGATTCAAGTGCGTGGTTGCTGCAG
GGATGCGACGCGTCGGTGCTGATCACGAGCGCGGGCAACGCCGCGGAGGTGAACAACAACAAGCACCAGGGCCTCCGAGG
CCTGGATGTGGTTGACCGCGCCAAGGCGGAGCTCGAGGAGCAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCATCGCTC
TCGCCGCACGCGACGCCATAGCCATGGTACGT----CATGTTGACACGAGGTGTTCGACTCGTACCGCATGCACGCTGTG
TTTGTCTGTAGTATTGTCGGGAACTCGTGATGCGCG----GTGCCACTGACGATCGAGATGCTGCTTGTCTTTGTCTGAC
GCGCGCCATGGCAGACGAACGGGCCGTCGTTCGAGGTGCCGACGGGGCGGCGCGACGGGCTGTCGTCGAACGTACGCGAC
GCCGACGTGCTGCCGGACGTGAGTGACTCCATCCAGGTGCTCCGCTCCAAGTTCGCCGCCAGCAGCCTCAACGACCGCGA
CCTCGTTCTCCTCACAGGTACGTACCCCCACT---TACTAGTACTCCGCGA-CATGCACGTCATACGCTGACACGCGACG
GCGTCCTCCTCCGCGACATGCATATGCAGCGGCGCACACGATCGGCACCACGGCGTGCTTCTTCGTCAAGGATCGGCTCT
ACAGCTACCCACTGCCGGGCAGCCGCACGGGGTCGGACCCGTCGATCCCGGCGGCGTTCCTGTCGGAGCTCAAGGCCCGG
TGCGCGCCCGGCGACTTCAACACGCGCGTGCCGCTGGACCGGGGCAGCCAGGGAACATTCGACGACTCCATCCTCCGCAA
CATCCGTGCGGGCCTCGTCCCCATCGCCTCCGACGCGGCGCTCGAGGCCAGCAACGCCACCGGCGCGCTCGTCGGCGCCT
ACCTCGGCGCGGCGTCCTCCAGCTTCGCGCAGGACTTTGTGGGCGCCATGATCAAGATGGGCACCATCGGCGCCATCACC
GGCGACGCCGGCGAGATCAGGGACGTATGCTCGGCGTTCAACACGAACTGATCGACGCGTCATTGCTATAAAATCATACG
AATGGTCGCATTCAAATTAGCACTGTAAATCTCTTGCGGAAACATGAATTCATTCCTCTTTATATA--------------
----------TACTCTAATATTGATAATCGAGAATGGTGGTGGGATTAAGATTGCATTTTCATTGGATAAACGGACGAGT
TGTTAACAAGTAACAACGTGTTTGATTTCTAGTGGCAAGAACATGCAGCAATTAATGTGCAATGCAAAGGAAACAAAAT-
TCGCAGAAAAGATGAGAATGGGA----GTACTCTGGAT---TAAGTAGTAACGTGTTGGTTTGAGCTGTCTATAGTCGGT
GCCGATTTAATGTTCTCAAGGAAAATATGGCGCCCATGCATGCATGTGATTGCACTGTGTACT-----------------
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-------------------------------
>chr6A_1
GAGCTACTCGACCATGGAAGATGAGTTGTTGTGCGATGCGTGGCTGGCCGTATCTGCGGATTTCGTAGGCAGGACCAGAG
GGGAGCCCTTCTGGGAGCAAGTGCATGAAAGAATTCACGCACGAAAGCACATTGCATCCTACGACATGTACATCATTCAA
CCATGCAACGTGAGGTCGTTGTCGTATCGCTGACACGCTATCTAGATCAGCGTCACCAAG--TTTTGCGACGTGGTTCGT
CAGCTCGAGGCAAGGTGGCCATTGCATGCGGTTGAGGGCGAGATCGTAAGTTTTACTTCCTCTTGCTCAACTCGTTGATT
GTTTCATTCACTCAATGTTGGTCTATACATTATATGTAGCCCACACGTGTTGCCGTGGTGTACCACAGGACAGAGGGACG
ACCATTTACGTGCA--CATAC-TGTTGGATGAAGCTGAAGGGGGAGTATGTGTGAAATGACATGACCCGTTGATGAAA--
CTTGTTGGATATCCGA--AATCTAGTCGAATTAGAGACATTGTTGTACTAGACTTAATTTACATGGTATGTATGGATGAT
TTGTGCTATTTTCTATTCGGACTTTGATGAATATCGACCGATTTGCATGAATTTCACCCGGTTAGTTAAAATG-------
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>chr6A_1
GAGCTACTCAACCATGGAGGATGAGTTGT---GCGATACGTGGCTGGCTGTATCCGTGGATCTCATAGGCAGGAGTAGAG
GGGATCCCTTCTGAGAGCGAGTGCGTGAAAAGTTTCACGCATGAAAGCACATTGCGTCCCACGACATGTACATCATTCAA
TCACGCAACATGAGGCCATTGTCATATCGCTGGCATGCTATCCAGATTAGTGTCATCAAA--TTTTGCAACATGGTTCGT
CAACTCGAGGAAAGGTGGCCACTGCACGCAGCAGAGGACGAGATCATAAGTTTTACTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTCAATGTTGGTCTACACATTATATGTAGCCCGCAAACGCCGACGTGGTCTACCACAGGACAGAGGGACG
TCCATTTACGTGCA--CATAC-CGTTGGATGAAGGTGAAGGAGGAATATGTGTGGAACGACATGATTCGTTCATGAAAAA
CTTGTTGGACATCCGG--GATCTAGTCGAATTA-AGACATTGTTGTACTAGACTTAATTTGCATGTTATGTATGGATGAT
TTGTGCTATTTTCTATCCAAACTTTGATGAATATCGGTCGCTTTGCATGAATTTCGTCCGGTTAGTTAAAATGC-GGTTT
GAAATGTATGCCACTACGGTTGGATGGCGTCTTCCCGCATCC--------------------------------------
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-------------------------------
>chr3D_1
GAGCTACTCAACCGTGGAGGATGAGTTGTTTTGCGATGTGTGGCTAGC-GTAACTGCAAATTTCGTAGGCAGGAGCAGAG
GGGAGCCCTTCTGGGAGCAAGTGCATGAAAAGTTCCATGCACGAAAGCACATTGCGCCCTATGATATGTACATCATTCAA
CCACGCAATGTCAGGTCGTTGTCGTATCTCTGGCACGCTATCCAGATCACCGTCACCAAG--TTTTGCGACGTGGTTCAT
CAGCTCGAGGCAAGGTGGCCATTGGACGCGGCAGAGGATGAGGTCGTAAGTTTTACTTCCTCTTGGTCAACTTGTTGATT
GATTTATTCACTTAATGTTGGTCTACACATTATATGTAACCCACACGCACCGCCGTGGTGTACCATAGGATAAAGGGACG
GCCATTTACGTGCG--CAC---TGTTGGATGAAAATGAA-GGGGAGTATGTGTGGAACGACATGATCCGTTCATGAAAAA
CTTTTTGGACATCCGG--GATCTAGTTGAATTAGAGACGTTGTTGTACTAGAGTTATTTTGCATGTTATGTATGAATGAT
TTGTGCTATTTTCTATCCGAACTTCGACGAATATCGGCCGATTTGCATGAATTCTGTACGGTTAGTTAAAATAT-GGTT-
GAAAAGTATGCGTCTACGGTTGGATGCCGGCCTCCCACATC---------------------------------------
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-------------------------------
>chr7D_2
-AGCTACTCGACCATGGA-GATGAGTTGTTGTGCGATGTGTGGCCGGCCGTATGCGCAGATTTCATAGGCAGGAGCAGAG
GGGAGCCCTTCTAGGAGCAAGTGCATGAAAAGTTTCACGCACGAAAGCATATTACGCCCTACGACATGTACATCATTCAA
CCACGCAACGCGAGGTCGTTGTCATATCGGTGGCACGCTATCTAGATCAGCGTCACCAAG--TTTTGCAACGTGGCTCGT
CAGCTCGAGGCAAGGTGGCCATTGCACGCGGCAGAGGACGAGATCGTAAGTTTTGCTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTCGATGTTGGTCTACACGTTATATGTAGCCCGCACGCGTTGTCGTGATGTACCACATGATAGAGGGACG
GTCATTTACGTGCA--CACGC-TGTTGGATGGAGCTGAAGGGGGAGTATGTGTGGGACGACATGATCTGTTCATGAAAAA
CTTATTGGACATCCGG--GATCTAGTCGAATTTGAGATCTTGTTGTACTAGACTTAATTTGCATGGTATGTATGGATGAT
TTGTGCTATTTTTCACCTGAACTTTGATGAATATTGGCCGGTTTGCATGAAATTCGTTCGGTTTGTTGAAAAAG-TGTTC
GAAATGTATGCAGCTAGCAATGGATGGCGTCATCTCGCATCC--------------------------------------
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-------------------------------
>chr7B_2
-AGCTACTCAACCATGGA-GATGAGTTGTTGTGCGATGTGTGGCTTGCCGTATCTGTGGATTTCATTGGCAGGACCAGAG
GGGAGCCCTTCTGGGAGCAAGTGCATGAAAAGTTTCCTGCATGAAAGCACATTGCACCCTACGACATGTACATCATTCAA
CCACGCAACGCGAGGTCATTGTCGTATCGGTGGCACGCTATCCAGATCAGCGTCACCAAG--TTTTGCAACGTGGTTCGT
CAGCTCGAGGCAAGGTGGCCATTGCACGCGGCAGAGGACGAGATCGCAAGTTTTTCTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTCAATGTTGGTCTACACGTTATATGTAGCCCGCACATGCTGTCCTGATGTATCACAGGATAGAAGTATG
GTCATTTACATGCA--CACGT-TGTTGGATGGAGCTGAA-GGGGAGTATGTGTGGGACGACATGATCCATTCATGAAAAA
GTTATTGGACATCCGG--GATCTAGTCAAATTTGAGATCTTGTTGTACTAGACTTAATTTGCATGGTGTGTATGGATGAT
TTGTGCTATTTTCTACCTGAACTTTGATGAATATTGGCCTGTTTGCATGAAATTCGTCTGGTTTGTTAAAAAGA-GTTT-
GAAATGTATGCGGCTAGCGTTGGATGGCGTCCTCTCACATCC--------------------------------------
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>chr1A_3
--GTTACTCGACCATGGAGGATGAGTTGTTGTGCGATGCGTGGCTGGCCGTATCGACGGG-TTCGTAGGTAGGAGCACTG
GGGAGCCCTTCTGGGAGAAAGTGCATGGAAAGTTTCACGCACAAAAGCACATTGCGCTCTACGACATGTACATCATTCAA
CCACCCAATGTGAGGTCGTTGTCATATCGCTTCCATGCTATCCAGTTCAGCGTCACCAAAAGTTTTGCGACATGGTTACC
CCGCTCAAGGCAAGGTGGCCATTGCACGCGGCAGAGGACGAGATCGTAAGTTTTTCTTCCTCGTGCTCAACTTGTTGATT
GATTCATTCACTCAATGTTGGTCTACACGTTATATGTAGCCCGCACGTGCTGTCGTGGTGTAACACCGAATACAGAGACG
GCCATTTACGTGCA--CACACACGTTGGATGAAGCTGAAGGGAGAGTATGTGTGGGACGACATGATCCGTTTATGAAAAA
CTTGTTGGACGTCCGG--GATCTAGTCGAATTTGGGACCTTGTTGTACTAGACTTAATTTGCATGATATGTATGCTTTGT
ACTA---TTTTTCTATCTGAACTTTGATGGATATCGGTCGGTTTGCATGAATTTCATATGATTTGTTAAAATGCGGGTT-
GAAATGTATGCGGCTAGCGTTGAATGGCGTCCTCCTACATC---------------------------------------
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>chr3D_16
---------------GGATGATAAGTTGTTGTGCAATGCGTGGCTAGCTGTATCCTCGGATTTCATAGGCAGGAGTAGAG
GGGAGCCCTTCTGGGAGCAAGTGCATGAAAAGTTTCATGCACGAAAGCACATTGCACCCTACGACATGTACATCATTCAA
CCACGCAACGTGAGGTCGTTGTCGTATCGCTGGCATGCTATCCAAATCAGCGTCATCAAG--TTTTTCAACGTGCTTCGT
CAGCTCGAGGCAAGGTGGCCATTGCATGCGGCAGATGACGAGATTATATGTTTTACTTCCTCTTGCTCAACTTGTTGATT
GATTCATTCACTTAATATTGGTCTACACATTATATGTAGCCCGCACGCGCTGCCGTGGTGTACCACATGACAAAGGAACG
GTCATTTACACGCACACAC---TGTTGGATGAAGCTGAA-GGGGAGTATGTGTGGAATGACATGATCCGTTCATGAAAAA
CTTGTTGGACATCCGG--GATCTAGTTGAGTTAGAGACATTGTTGTACTAGACTTAATTTGCATGCTATGTATGAATGAT
TTGTGCTTTTATCTATCCGAACTTTGATGACCATCAGGCGTTTTGCATGAATTTCGTCTGCTAAGTTAAAATGCGGTTT-
GAAATGTATGCGGCTACGGTCGGATGTCGTCCTTCCGCATCC--------------------------------------
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-------------------------------
>SNPs
--------------------------------------------------------------------------S-----
-----------------------------------------------S--------------------------------
-------------------------S--------------------------------------------S---------
-----------------S----------S----------------------SS--------------S------------
-----------------------------S-----------------------S--------------------------
-----------------------------------------------------------------------S--------
---------------------------------------------------------------------S----------
-------------SS---------------------------------S-------------------------------
----------------SS---------------------------------------S--S-------------------
S----------------------------------------------------S--------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-------------------------------------------------------S------------------------
S-------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------S-S---SS----------------------------------------S-S-----------------
-------------------------------------S------------------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------------------------------------S------
----------------------------------S-SSSS-----------------------------S----------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---------S--S---------------S-----S---------------------------------------------
------------------------S-----------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
----------------------------------------S---------------------S-----------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S----S---------------
----S-S-SS-----S----------------S--S-----------------------------------S--------
--------S--------------S--------------------------S-----------------S----SS----S
------S-------------------------------SSS---------------------------------------
----------------------S----S---------------------S-------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGC
GGAATGTATGCGGCTAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATAAGTAGCGGCGTGTTGGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
