>input_sequence_54371
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AT-GGACGGCGGCGGAGACGAGC
CCCTGCAGGTCGCCGTCAAGGTGCACGATGGGGATAACAGCTTCCAGGGCCACAGGGAGTGGCTGGTCAGTCT--CTCTA
ATCGTGACAC--CTACA---TTTTGTTTTCAAATTGGCACCTACACTAATTAAACTCTCACAAATCTTTACTACTCCTAC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGTGTTTATTTCCATAATAAATGTAGTAATTTTTTTGAGGTAACATAAATGTA
GTAATTGTAAGCGTGGTAGGTGCAGATTTTGGTTGTACGCCTAGCCTGACAAGCATCTATCTTGCTATGCCTTTTTGTGT
CGAGATTATGTAGGTGGAGTTGATCTTCTTGGGCCACCTGTCGCACCCAAACCTGGTGAAGCTAGCGGGCTACTGCTGTG
AGGGCGAGCACCGGGTGCTGGTCTACGAGTACATGCCGCTCGGTAGCGTGGAGTCACACCTCTTCTCACGTACGTAGGCG
TACCACCTTCATTTTCCACACTTTTAGTTTGGTGCGTGTCCAGAGCAGGTGCGATTGATGGATGTGGTTTTCATTTCAGG
GGTGATGGCGCCCCTGGCGTGGGCGACGAGGATGAAGATCACGCTGGGCGTGGTGAGGGGCCTGGCTTTCCTCCATGAGG
CCGAGAAGCCCGTCATCTACCGCGATTTCAAGACCTCCAACATCCTCCTCGACCATGACTTCAACGCCAAGCTCTCCGAC
TTCGGCCTCGCCAAGGATGGCCCCGTCGGCGACATATCCCACGTCTCCACCCGCATCATGGGCACCTACGGTTACGCCGC
CCCAGAGTACATCATGACAGGTGCCATGCCAAAAATAGAGAGACTACAAACTCAAATTAAGCTCGATCATATATACTTGT
CTGGTGGCTAAATTGATTTGACTGAAAGCGAT------------------------------------------------
-------TAGGGCACCTGACGGCGATGAGCGACGTGTACAGCTACGGGGTGGTGCTGTTGGAGCTGGTTACGGGGCGCAA
GTCACTGGACAAGTGTTGGCCGATGCGGGAGCAGACGCTGGCGGACTGGGCGTTGCCGATGCTGATGCACAAGAAGTAGG
TGTTGGGGATCCTAGACCCAAGGCTCGGCTCCGACGACTACCCCGTCAGGTCCGTGCAGAAGGCGGCCATGCTCGCGTAC
CACTGCCTCAGCAGCAACCCCAAGGCGCGGCCGCTCATGCGCGACATCGTCGCCTCCCTCGAGCCGCTGCAGCAACTGGA
GCTCGTGCCCGCCAACTTGTGATCCTCATTTCAAGTTTTAGTCCAGGCCTTGCTGGTGTTGTCAGATCCATCGCCTCTAC
TTCAGCTCATAGAAGCAGACTAGAATTCATGTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G149900
CTCATGATTAAAAGT----ATAAAGGGAAGAAAGTGATGGTTCACTTGAATCGTACTACTG-CCTTTTGTTTGTTTTTCT
TTTCGTTTCTTTCCTTTCTCCTCTTGTTGAAGTAGTAGTACCAAGTACCGATCCTCCTCCTCGGG--TCTCTCTCTCTCT
GTGT----TCATTCATTCCTCTTTCGTCTGTGACCAACTTTTCTCTCCGTGGGCCTTTGGCCCTTTCCCTGTTTCGTTTA
GGACGAAAGCTGGTTTGATCGTCCGGACTCTCGTCAACTCTTGAGCCCTGCATATAGACATAGTGATCGTCTTCTTCCTT
TCTTATCAGGATACTCGCTCTGCTTCCTTCTCTATTTTTCCAGTCTTTACCTCTGTACCAT------CTTCTTCTTCCTC
GGGCTGTTCTTGGTGGCAGAAATAGGGGAGAGAGATAGATATAGAGGGAATAAATACTCTGTCTTATGGGCAACTGCTGG
TTTCGGGGGAGTTCCTACATTAACAGGGTCTCCACTGCAAAGTCAGGTGAGTAATACTCCTCTTCCTTGCTGCTCTGCTT
TCTAAGTGATCGTTATGCGTGATCCACCGCCCTCAGATTCAGAAATTTGATTTCGTTTTTTGTCCGAACCGGAAGTCCTG
ATTGGGCACTCTATTTCAGTATTCTATAGGCAAATGGATTATTTCCTGAAATTTTGACCACCCACTACCACTAGCTCCAG
CAAAATCCATTATTTAAAGAGAGATAATTCAGTTGGCGTGGTGATGGTATTGACAGTTGTGGTACGTACGTGTGCAGAGA
CTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGATGAGAGCAGGCTGCCGTCGAACGCGAGGGAGGTGGAGGCC
ATGCAGCTCGACTCGGCGGCGCGGAACCCGCTGACCGCCTTCTCTTTCGAGGAGCTCCGGAAGGTGACCAACGGGTTCCG
GCAGGACTCGCTAATCGGCGGCGGCGGCTTCGGCAGGGTGTACAAGGGCGCCGTGGTAT-GGACGGCGGCGGAGACGAGC
CCCTGCAGGTCGCCGTCAAGGTGCACGATGGGGATAACAGCTTCCAGGGCCACAGGGAGTGGCTGGTCAGTCT--CTCTA
ATCGTGACAC--CTACA---TTTTGTTTTCAAATTGGCACCTACACTAATTAAACTCTCACAAATCTTTACTACTCCTAC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGTGTTTATTTCCATAATAAATGTAGTAATTTTTTTGAGGTAACATAAATGTA
GTAATTGTAAGCGTGGTAGGTGCAGATTTTGGTTGTACGCCTAGCCTGACAAGCATCTATCTTGCTATGCCTTTTTGTGT
CGAGATTATGTAGGTGGAGTTGATCTTCTTGGGCCACCTGTCGCACCCAAACCTGGTGAAGCTAGCGGGCTACTGCTGTG
AGGGCGAGCACCGGGTGCTGGTCTACGAGTACATGCCGCTCGGTAGCGTGGAGTCACACCTCTTCTCACGTACGTAGGCG
TACCACCTTCATTTTCCACACTTTTAGTTTGGTGCGTGTCCAGAGCAGGTGCGATTGATGGATGTGGTTTTCATTTCAGG
GGTGATGGCGCCCCTGGCGTGGGCGACGAGGATGAAGATCACGCTGGGCGTGGTGAGGGGCCTGGCTTTCCTCCATGAGG
CCGAGAAGCCCGTCATCTACCGCGATTTCAAGACCTCCAACATCCTCCTCGACCATGACTTCAACGCCAAGCTCTCCGAC
TTCGGCCTCGCCAAGGATGGCCCCGTCGGCGACATATCCCACGTCTCCACCCGCATCATGGGCACCTACGGTTACGCCGC
CCCAGAGTACATCATGACAGGTGCCATGCCAAAAATAGAGAGACTACAAACTCAAATTAAGCTCGATCATATATACTTGT
CTGGTGGCTAAATTGATTTGACTGAAAGCGAT------------------------------------------------
-------TAGGGCACCTGACGGCGATGAGCGACGTGTACAGCTACGGGGTGGTGCTGTTGGAGCTGGTTACGGGGCGCAA
GTCACTGGACAAGTGTTGGCCGATGCGGGAGCAGACGCTGGCGGACTGGGCGTTGCCGATGCTGATGCACAAGAAGTAGG
TGTTGGGGATCCTAGACCCAAGGCTCGGCTCCGACGACTACCCCGTCAGGTCCGTGCAGAAGGCGGCCATGCTCGCGTAC
CACTGCCTCAGCAGCAACCCCAAGGCGCGGCCGCTCATGCGCGACATCGTCGCCTCCCTCGAGCCGCTGCAGCAACTGGA
GCTCGTGCCCGCCAACTTGTGATCCTCATTTCAAGTTTTAGTCCAGGCCTTGCTGGTGTTGTCAGATCCATCGCCTCTAC
TTCAGCTCATAGAAGCAGACTAGAATTCATGTGAAAAAAATTGTGTGTGATTGCCTAGTATAGCAGGCAGGCAGGTGAAG
TGTTCTTGATGCTATAAATGATTGTACATTCTTCCGAGTTGTGGACCCTAGAGGTGTGCGGGTGGAAACGGACTCTGATA
GTTTGTCAATATCCTTCCTTAGTTCCTTGGGCACACATCAAAAAGACCTGTAAAACCCTCTTGATTTTTTGTTACTCGTA
GGTGTGTATATCGGAT-TTTTTTTGTTTTTTGAAATGGAATACCAACATGAAGCCGATCCTCTAATTTGCACGAGGCAAG
TCGGGAAGCTAAAGTGCTCTTTTGTAAAAAAGAAAGAAGGGGAAAGCAAGTTAGAGTCCTTTTGAAATTGAACTGGAACT
GTTGAACAAGCTAAATGAATCTTTTGAAAATTGAAATTCGTATGTTAAAAGCTGAAACGGATCTTTTGAAAAATGAACTC
AATATTTAAAAAATTGAAATGAACATTGTTCATGAAACTAGAGAGTCCTTCCTAAGTAAGAGGATCCGGCACCCACAAAC
GCTGGCCACCCGCCCCATTACATTCCATGAAGGACATCATACATGCCTGATATCCTCTCGACGTGAGCCAAACGTTGTCA
GAGCATGGGTTAACATTTACAATATCAAGGGGTATAACTAAAAGGTAGAGAAGTAAAGTTCATTGCAGAGAAAAGACAGA
TTTTGATAGAGCAGGCTTATCCCGATCTTTCAATGAGGGGTAACTATCTTTTTG-GTGGAGTAGACTTTCACGATCCGAC
TACGAACGTGTGAAGACGTCGTGCCTTAGCAATTGTTAAACCAACTTTCCGAGATTACTAACAACAAAGGAGCATGATCA
ACCTGACCACGAAGGCCTAATTCCTGCATGCAAATGAAGAACAAGAAAGTACTAAGATTGCAATCTGGATATTGCGAATT
AAGATGAAAGCTTCATTGATAAAGTTTGCGGTTTCGTGAACATCTTGGCCTGGTCGTTGGACACAAATAAAGTACT
>chr1D_1
CTCATGATTAAAGGTAATGATAAAGGGAAGAAAGTGATGGTTCACTTGAATCGTACTACTG-CCTTTTGTTTGTTTTTGT
TTTCG-TTCTTTCCTTTCTCCTCTTGTTGAAGTAGTACTACCGAGTACCGA---TCCTCCTCCGGTCTCTCTCTCTCTCT
GTGT----TCATTC----CTCTTTCGTTTGTGACCAACTTTTCTCTCCGTGGGCCTTTAGCCCTTTCCCTGTTTTGTTTA
GGACGAAAGCTGGTTCGATCGTCCGGAGTCTCGTCAACTCTTGAGCCCCGCATATAGACACAGTGATCGTCTTCTTCCTT
TCTTATCAGGATACTCGCTCTGCTTCCTTCTCTATTTTTCCAGTCTTTACCTCTCTACCATCTTCTTCTTCTTCTTCCTC
GGGCTGTTCTTGGTGGCAGAAATAGGGGAGAGGGCTAGATATAGAGGGAATAAATACTGTGTCTTATGGGTAACTGCTGG
TTTCGGGGGAGTTCCTACATTAACAGGGTCTCCACTGCAAAGTCAGGTGAGTAATACTCCTCTTCCTTGCTGCTCTGCTT
TCTAAGTGATCGTTATGCGTGATCCACCGCCCTCAGATTCAGAAATTTGATTTCGTTTTTTGTCCGGACCGGAAGTCCTG
ATTGGGCACTCTGTTTCAGTATTCTA--GGCAAATGGATTCTTTCCTGAAATTTTGATTACCCACTACCACTAGCTCCAG
CAAAATCCATTTTTCGAAGAGAGATAATTCAGTTGGTGTGGTGATGGTATTGACAGTTGTGGTACGTACGCGTGCAGAGA
CTCCCAAGATCCAGAGCCCGTCGGAGAGGGACCGGAGCGATGAGAGTAGGCTGCCGTCGAACGCGAGGGAGGTGGAGGCC
ATGCGGCTCGACTCGGCCGCGCGGAACCCGCTGACCGCCTTCTCTTTCGAGGAGCTCCGGAAGGTGACCAACGGGTTCCG
GCAGGACTCGCTAATCGGCGGCGGCGGCTTCGGCAGGGTGTACAAGGGCGCCGTGGGTACGGACGGCCCCGGAGACGAGC
CCCTGCTGGTCGCCGTCAAGGTGCACGACGGAGATAACAGCTTCCAGGGCCACAGGGAATGGCTGGTCAGTCT--CTCTA
ATCGTGACAC--CTACTTTTTTTTTTTTGCAAATTGACACGTACATTAATTAAA-TCTCGCAAATCTTTGCTTTTTCTTC
GATAAAGAGTG-TTTTTTATTGACTCATAATGTGGCACCGAGTGATACAATTATAAAGCTAGCCATAGTGGGGTAACATA
ACCGGTAACCACTTGGGACTAGCAAACATGCTTATGTGGCACACAATTAAATAAGAGAGAGGGTTATAGTAACATAGGTA
GATATCGTATCATGTTAAATGTTATGCTACTTTATGTCATGCATGGCAATAAATATGGTAATCTATGATATTTATGATAC
TATGCACTATGAAGGCAGTATCATACACTAGTATCATATGCATGATATTAGTATATGTTACTCCCCACTATGAGTAGCCT
AAGAGTATATACCCGATCTCTACATAGTTAAGATGCACACAACCAACACTAAATTACAT-------------------CA
ATAAATAGTAAAGTCAAATAAGACCGAAGTGTTTATTTCCATAATAAATGTAGTAATT----------------------
------GTAAGCGTGGTAG------------------------GCCTGACAAGCATCTATCTTCCTATGCTTTTTTGTGT
TGAGTTTATGTAGGCGGAGGTGATCTTCTTGGGCCACCTGTCACACCCGAACCTGGTGAAGCTAGCGGGCTACTGTTGTG
AGGGCGAGCACCGGATGCTGGTCTACGAGTACATGCCGCTCGGCAGCGTGGAGTCACACCTCTTCTCACGTACGTAGGCG
TACCACCTCCATTTTCCACAGTTTTGGTTTGGTGCGTGTCCGGAGCCGGTGCGATCGATGCATGGGGTTTTCATTTCAGG
GGTGATGGCGCCCCTGGCGTGGGCGACGAGGATGAAGATCGCGTTGGGCGCGGCGAGGGGCCTGGCGTTCCTCCATGAGG
CCGAGAAGCCTGTCATCTACCGCGATTTCAAGACCTCCAACATCCTCCTCGACCATGACTTCAACGCCAAGCTCTCCGAC
TTCGGCCTCGCCAAGGACGGCCCCATCGGCGACATGTCCCACGTCTCCACCCGCATCATGGGCACCTATGGCTATGCCGC
CCCAGAGTACATCATGACAGGTGCCATGCCAAAAACAAAGAGATTGCAAACTCAAATTAAGCTAGATCATACATATGGGT
CTGGTGGCTAAATTGATTTGACTGCGAGCGAT------------------------------------------------
-------CAGGGCACCTGACGGCGATGAGCGACGTATACAGCTACGGGGTGGTGCTGCTGGAGCTGGTAACTGGGCGCAA
GTCGCTGGACAAGTCGCGGCCGGTGAGGGAGCAGACGCTGGCGGACTGGGCGTTGCCGATGCTGACGCACAAGAAGAAGG
TGTTGGGGATCCTAGACGCAAGGCTCGGCTCTGACGACTACCCCGTCAGGTCCGTGCAGAAGGCGGCCATGCTCGCGTAC
CACTGCCTCAGCAGCAATCCCAAGGCGCGGCCGCTCATGCGCGACATCGTCGCCTCCCTCGAGCCGCTGCAGCAACTGGA
GCTCATTCCCGCCAACGTGTGATCCTCATTCCAAGTTTTGGTCCAGGCCTTGCAAGTGCTGTCAGATCCATCGCCGCTAC
TTCAGCTCCTGGAAGCAGGCTAGAATTCATGTGAAAAAATATGTGTGTGATTGCCTGGTATATCAGGCAGGCATGTGTAG
TGTTCTTGGTGCGGTAAATGATTGTTCATTCTTCCGAGTTGTGGACCCTAGAGGTGAGCGGGTGGAAACGAGCTCTGATA
GTTTGTCAAGAA-CTTCCTTAGTTTCTTGGGCACACAACAAAAAGACCTGTAAAACCCTCTTGAATTATTATTACTGGTA
GGTGGGTATATCAGATTCTTTTGTCTTTTTTGAAATGGAACACCAACACGAAGCTGATCCTGTAATTTGCACGAGGCAAG
TCAGGAAGGTACAGTGCTCTTTTGTAAAAAAA-G----GGGGAAAGCAAGTTAGAGTCCTTTTGAAATTAAAATGGAACT
GTTGAACAAATAAAATGAGTCTTTCGAAAATTGAAATTCGTATGTTAAAAGCTGAAACAGATCTTTTGAAAATTTGACTC
AATTTTTCAAAAATTGAAATGAACATTGTTCATGAAACTAGAG-------------TTAGAGGATCCGGTACCCACAAAC
GTTGGCCACCCGCCCCATTACATTCCATGAAGGCCATCATACATGCCTGATATCCTCTCGAAGTGAGCCAAACGTTGTCA
GACCGTGGGTTAACATTTACAATCTGAAGGGGCATAACTAAAAGATAGAGAAGTAAAGTTCATTGCAGCGAAAAGACAGA
TTTTGATAGAGCAGGCTTATCCCGATCTTTCAATGAGGGGTAAATATC-TTTTT-GTGGAGTATCCTTTCACGATCCGAC
TACGAACGTGTGAAGACTTCGTGCTATAGCAATCACCAAACAAACTTTCTGAGGTTACTAACAATAGAGGAGCATGATCA
ACTTGACCACAAACGTCTAATTCCTGCATGCAAATGAAGAACAAGAAAGTACTAAGATTGCAATCTGGATATTGCGAATT
AAGATGAAAGCTTTATTAATAAAGTTTGCGGTTTCGTGAACATCTCGGCCTGGTCGTTGGACACAAATGAAGTACT
>chr1A_16
-------------------ATAAAGGGGAGAAAGTGATGGTTCACTTGAACCGTACTACTGCCCTTTTGTTTGTTTTTCT
TTTCGTTTCTTTCCTTTCTCCTCTTGCTGAAGTAGTACTACCAAGTACCGATCCTCCTCCTCCTCTCTCTCTCTCTCTGT
GTGTGTGTTCATTC----CTCTTTCGTTTGTGACCAACTTTTCTCTCCGTGGGCCTTTGGCCCTTTCCCTGTTTTGTTTA
GGACGAAAGCTGGTTCGATCGTCCGGACTCTCGTCAACTCTTGAGCCCCGCATATAGATACAGTGATCGTCTTCTTCCTT
TCTTATCAGGATACTCGCTCTGCTTCCTTCTCTATTTTTCCAGTCTTTACCTCTGTACCA---TCTTCTTCTTCTTCCTC
GGGCTGTTCTTGGTGGCAGAAATAGGGGAGAGGGCTAGATATAGGGGGAATAAATACTGTGTCTTATGGGTAACTGCTGG
TTTCGGGGGAGTTCCTACATTAACAGGGTCTCCACTGCAAAGTCAGGTGAGTAATACTCCTCTCCCTTGCTGCTCTGCTT
TCTAAGTGATCGTTATGTGTGATCCACCGCCCTCAGATTCAGAAATTTGATTTCGTTTTTTGTCCGGACCGGAAGTCCTG
ATTGGGCACTCTGTTTCAGTATTCTA--GGCAAATGGATTCTTTCCTGAAATTTTGATCACCCACTACCACTAGCTCCAG
CAAAATCCATTTTTCAAAGAGAGATAATTCAGTTGGTGTGGTGATGGTATTGACAGTTGTGGTACGTACGTGTGCAGAGA
CTCCCAAGATCCAGAGCCCGTCGGAGAGGGACCGGAGCGATGAGAGTAGGCTGCCGTCGAACGCGAGGGAGGTGGAGGCC
ATGCGGCTCGACTCGGCCGCGCGGAACCCGCTGACCGCCTTCTCTTTCGAGGAGCTCCGGAAGGTGACTAACGGGTTCCG
GCAGGACTCGCTAATCGGCGGCGGCGGCTTCGGCAGGGTGTACAAGGGTGCCGTGGGTACGGACGGCGGCGGAGACGAGC
CCCTGCAGGTCGCCGTCAAGGTGCACGACGGGGATAACAGCTTCCAGGGCCACAGGGAATGGCTGGTCAGTCTCCCTCTA
ATCGTGACACACCTACTTTTTTTTTTGCACAAATTGACATGTACATTAGTTAAATTCTCACAAATCTTTACTTTTTCTTC
AATAAAGAGTGTTTTTTTATTGACTCATAATATGGCACCGAGTGATACAATCA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
AAGAGTATACATCCGATCTCTACTTAGTTAGGATGCACATAGCCAATACACGCACACGCGCACACACAAAATTACCCCCA
ACAAATAGCAAAGTCAAATAAGACCGAAGTGTTTATTTCCATAATAAATGTAGTAATT----------------------
------GTAAGCGTGGTAGGTGCAGATTTTTGTAGCATGGCTAGCCTGACAAGCATCTATCTTCCTATGCCTTTTTGTGT
TGAGTTTATGTAGGCGGAGGTGATCTTCTTGGGCCACCTATCACACCCGAATCTGGTGAAGCTAGCGGGCTACTGTTGTG
AGGGCGAGCACCGGGTGCTGGTCTACGAGTACATGCCGCTCGGCAGCGTGGAGTCACACCTGTTCTCACGTACGTAGGCG
TACCACCTCCATTTTCCACACTTTTGGTTTCGTGCGTGTTCGGAGCCGGTGCGATCGATGCATGGGGTTTTCATTTCAGG
GGTGATGGCGCCCCTGGCGTGGGCGACGAGGATGAAGATCGCGCTCGGTGCGGCGAGGGGCCTGGCGTTCCTTCATGAGG
CCGAGAAGCCCGTCATCTACCGCGATTTCAAGACCTCCAACATCCTCCTCGACCATGACTTCAATGCCAAGCTCTCCGAC
TTCGGCCTCGCCAAGGACGGCCCCGTCGGCGACATGTCCCACGTCTCCACCCGCATCATGGGCACCTACGGCTATGCCGC
CCCAGAGTACATCATGACAGGTGCCATGCCAAAAACAGAGAGACTACAAACTCAAATTAAGCTCGATCATACATACGGGT
CTGGTGGCTAAATTGATTTTACTGTGAGCGAT------------------------------------------------
-------CAGGGCACCTGACGGTGATGAGCGACGTGTACAGCTATGGGGTGGTGCTGCTGGAGTTGGTGACAGGGCGCAA
GTCGCTGGACAAGTCGCGTCCGGTGCGGGAGCAGACGCTGGCGGACTGGGCGCTGCCGATGCTGACGCACAAGAAGAAGG
TGTTGGGGATCCTAGATCCAAGGCTCGACTCTGACGACTACCCCGTCAGGTCCGTGCAGAAGGCGGCCATGCTCGCGTAC
CACTGCCTCAGTAGCAACCCCAAGGCGCGGCCGCTCATGCGCGACATCGTCGCCTCCCTCGAGCCGCTGCAGCAACCGGA
GCTCATGCCCGCCAACGTGTGATCCTCATTTCAAGTTTTGGTCCAGGCCTTGCAGGTGCTGTCAGAACCATCGCCTCTAC
TACAGCTCCTGGAAGCAGGCAAGAATTCATGTGAAAAAATATGTGTGTGATTGCCTAGTATAGCAGGCAGGCAGGTGTAG
TGTTGCTGATGTTGTAAATGATTGTTCATTCTTCCAAGTTGTGGACCCTAGAGGTGAGTGGGTGCAAACGAGCTCTCATA
GTTTGTCAAGAA-CTTCCTTAGTTTCTTGGGCACACAACAAACAGACCTGTAAA-CCCTCTTGAATTTTTATTACTAGTA
GGTGCGTATATCAATTGTTTTTGTCTTTTTTGAAATGGAACACCAACACGAAGCCGATCATGTAATTTGCACGAGGCAAG
TGAGGAAGCTACAGTGCTCTTTTGTAAAAGGGGG----GGGGGAAGCAAGTTAGAGTCCTTTTGAAATTAAAATGGAATT
GTTGGACAAATAAAATGAGTCTTTTGAAAATTGAAATTTGTATGTTAAAAGCTAAAACGGATC-TTTGAAAATTGGACTC
AATTTTTCAAAGATTTAAATGAACATTGTTCATGAAACTAGAGAGTCCTTCCTAAGTTAGAGGATCCGGCACCCACAAAC
ACTAGCCACCCGCCCCATTACATTCCATGAAGGCCATCATACATGGCTGATATCCTCTCGACGTGAGCCAAACGTTGTCA
GAGCGTGGGTTAACATTTACAATCTGAAGGGGCATAACTAAAATATAGAGAAGTAAAGTTCGTTGCAGCAAAAAGACAAA
TTTTGATAGAGTGGGCTTATCCCGATCTTTCAATGAGGGGTAACTATC-TTTTTGGTGGAGTATACTTTCACGGTCTGAC
TGCTAACGTGTGAAGACGTCGTGC--------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr4A_1691
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CAACGCGAAGCTCTCTGAC
TTCGGGCTGGCGAAGGACGGGCCGGTCGGGGACAAATCACACGTCTCGACCCGCATCATGGGCACCTACGGCTACGCCGC
CCCAGAGTACATCATGACAGGTA---------------------------------------------------------
--GGTAGCCATCACCATGTCACTGAACGTGAGCAGAGCGATGAGAATTTGGTATCTGAATTTTGAACTGTTGTGCTGTTG
TGTCTTGCAGGGCACCTGACGGCGATGAGCGACGTGTACAGCTACGGGGTGGTGCTGCTGGAGCTGCTGACGGGGCGCAA
GTCGCTGGACAGGTCAAGACCGGTGAGGGAGCAGACGCTGACGGACTGGGCCTTCCCGCTGCTGGCGCACAGGAAGAAGG
TGCTGGGCATCGTCGACCCCAGGCTCACCGCCGACGACTACCCCGTGAAGGCCGTGCACAAGACGGCCATGCTCGCCTAC
CACTGCCTCAGCCGCAACCCCAAGGCCAGGCCGCTCATGCGCGACATCGTCGCCACCCTCGAGCCCCTGCAGCA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
------------S-------------------------------------------------------------------
-------------------------------------S------------------------S-----------------
--------------SSSS---------S----------------------------------------------S-----
---------------S--------------------------------S-----------S-------------------
--------------------------------------------------------------------------------
--------------------------------S-S-----------------------S-----------S---------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
------------S-------------SS------------S----------------S----------------------
-----------S--S---------------------S-------------------------------------------
-------------------S--------------------------S---------------------------------
----S------------S--------------------------------------------------------------
--------------------------------------------------------SSS---------------------
----------------------------S-----------------------------S---------------------
----------------S-------S---S-------S---S----S--------S-----------------SS-S--S-
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSS------------------------S--S-S-S-S-----------------------S----------------
S---S---------S----S----------------------S-----S--------------------------S----
-------------------------------------------S------------------------------------
--------S----------------S---------------S----S--------S----S---S---------------
----------------------------------------S---------S--S------------S-------------
--------------------------------------------------------------------------------
-----------------S-----------------------------------------------------S--------
-----------------------------------S-----------------------------------S----SS--
--------------------------------------------------------------------------------
-------S-------------------------------------------------S----------S-----------
---S----------SSS-----S------------------------------------------S----------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------S----------------------S-------------S----S---------------------
--------S-S-------S--------------------SS------------------------------------S--
-------------S-----------S------------------------------S-------------SS--------
---------S-SS-----------S------------S--------------------------S-----S-----S---
----S-------S---------S-S---------------S-------S------------S------------------
--S--------S--------------------SSSSSS-------------------------------S--S-------
---------SSS------S-----------------------------------------------------S--S----
---S---S-------------------------------------------------S----------------------
---------------------------------S----------------------------------------------
----S------------------S-S------S-----------S-----------------------S-----------
------------------------------------------------S----S---------S----------------
------------------------SS-------SSSS----S-------S---S----------S-S-------------
--S-------S--S-S----------------------------------------------------------------
-------------S---S---------------------------S----------------------S-------
>forward_143
--------------------------------------------------------------------------------
-------------------------------------------AGTACCGATCCTCCTCCTCG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_1686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGTAAGCGTGGTAGGTGCAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCGTCAACTCTTGAGCCCT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_1809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AAACCTGGTGAAGCTAGCGG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_820
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CTCCCAAGATCCAGAGCCCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCTTCCTTAGTTCCTTGGGCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
