>input_sequence_54363
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------ATGAACTTCCTACTAGACCTTAAGCATCTC
AAGCACATTAGCTTGCCGACGAGGCCTGTCATTTGCAAATGCCTTCTAGTAGTGATTGGTCTTATTGTATTGAGAGCGAT
TGTCTCCCCTTTTCTCGCCATTAATTTGTCTGAGAAGAGTTTTTATGAGCCATCAACCCTTGACCTGTTTCCTGGAGTTA
GGAAAGACAAGTTTGTTGAGGTCCCACAGATTATATGGGGATTGAACAATCAGAAGATCGCATTTGCCAGGGCATGCTTG
ACTGCCAAATTCCTGAATCGGTCTCTGCTCATGCCAAGTCTGAGTGCTTCACTTTTTTACAAAGAGGTTGACTTGCTGCA
GCCTATTCCTTTCGACAAGGTGTTTGACTTCACCAAATTCAATGCACGCTGTCATGGGTTTGCAAGGCTAGCTCGGTACT
CCGAGGTTTCGAATCATACTGAGCCCTATAAACTACAAAAGGGAAGTGGTAGGAGGTGGACAGTGGAGAGAGACTTGGAT
CAGCTGCAACAGTCCAAAACGGGTGAAGCTGATGGCTATCAAGTAATTCATGTCACTGGGAAACATCCGTTTCTGTGGCC
TGACCATTGGCCAGTGAAAAACTATGCCAAGGTCTTCGATTGCCTTGCCTTAGCTCCTGATATAGAAGCTGAAGTAGTCA
AGGTCATATCCAAGATTAAAGATGCAGGGGAAAAAGCAAGACACGAGGCTGCTATTTCCCATAAAAAGAAGAGTATAGAT
GATGGTTCGTTAAATCTGCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAGGACTGGATGATCCACTGCAAGAA
GTGGGAGAAGCGGTCTAACTTGAAGGAAATCTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGATC
TACGCCGGCCGGTTGTGGTTTATCTTGCTGTAGCCGACAGCCTTCTAGAAGATGATTCTGTCACCAGTGGCTGGAGAGTG
GGTATGATTGCCTATGAGAAGAAGAAACTCGGAGTTACTGACATATACGAGAGGCAGCCTTACCTTCTAAAGTCTGCCAT
CGACTTTGAGGTGTGCGCGAGAGCAGATGTGTTTGTTGGCAATAGCTTCTCAACATTTTCCAACCTCGTAGTTTTATCTA
GAACAGAAAGGCTGTATAAGCTGGGGGTGGAAAGCTCATGTGGCGAGGATGTTGGGCTGTCGTCATATGCATACAATGTT
ATTGGAGATGACGGCGGGCCTCAGAGATGGATGACAGATATGTTGGACACAAGCCTTCAGCGCATAAGCTATGGAACAAA
TAACATCTCCTGCCACTGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr7A_1_TraesCS7A01G095700
GCGGCCAGTTGGAGCTTTTCCCTATGAAAGATCTGCTCAGATTAGGTATGGACGACA-CGGCTCAGCTTCTGTGTTCTTG
TTTTTTTTTCTTTCTATAGCTGCTGCAGGTTCTGCCAGATCTAAATCTATAGTCAGACTAGTGATTGCTTGCCCTCGCTC
TTGGAGCTGCTATGTTTTGCAAAGCCATTTGTTATTTGCTCAGGTGTATTTTTT----CTCCTGCAAAAGTCAAGATTCA
TTTTTTGTGAGTAGTGACCAGTGAGCATGATTTTGTTTACATTCATTTTTAGTTTTAGTGAATGGCTCCAGTATGTCAGG
CTAGCATGCTGACATCCATATGAAATGATGAAATTTATAAATTGGA-CTTGGATGTACAAAAGCTGCTGGCTTAGGTGGT
GTTAGGATAGTTAAACTCATTACACTGAACATGTATGAGTATAACCTTGCTGTTTATGCTTGCTTTACTAGTGGTCGCCG
CCGACATATCTGGCATTCCGTAAACCGATGTAAAATGACTCTAGGTGATTTCCTTCGAGCTATGGTTAATTAGTTAATCT
TTGCTCTTAAGACAGTTCATCTATGAGCAAATACAATCAACAGAGGTTGTATGTAGTCACTTGGTAGATTTTGAAATTGC
ATGTGAAGTGTGGCAGCATAATAACCTTGAGTTGTGTCTTTGTTTTCCATTTCATTTCAGTTGCAGCCTCTCTGGCGGAG
CGTACAGTAAACTGTTACTGGGTTCAAGAAGTATGCTTATA---CTAGTAACTGAATGCCCTGAGCTTGAAATCTAATTT
ACTCGTTTCCCAGGAAGAACTGGTGCAGACATCCAAGCGTGTTTGGTTATTGAACCCATTAG-GTTGCAGCGCAGTTTGT
ACTTCAGCAACAAAATGAAGCGGAAATGTTGATCATGTGCCACTGGTGTTGGAATGAGATAACTTGCACCATTGGGTGAT
AAAATCATAAATGACCTTTTGGGACGGGAAGGAATCAAAGAACTGTATCAATGAACTTCCTACTAGACCTTAAGCATCTC
AAGCACATTAGCTTGCCGACGAGGCCTGTCATTTGCAAATGCCTTCTAGTAGTGATTGGTCTTATTGTATTGAGAGCGAT
TGTCTCCCCTTTTCTCGCCATTAATTTGTCTGAGAAGAGTTTTTATGAGCCATCAACCCTTGACCTGTTTCCTGGAGTTA
GGAAAGACAAGTTTGTTGAGGTCCCACAGATTATATGGGGATTGAACAATCAGAAGATCGCATTTGCCAGGGCATGCTTG
ACTGCCAAATTCCTGAATCGGTCTCTGCTCATGCCAAGTCTGAGTGCTTCACTTTTTTACAAAGAGGTTGACTTGCTGCA
GCCTATTCCTTTCGACAAGGTGTTTGACTTCACCAAATTCAATGCACGCTGTCATGGGTTTGCAAGGCTAGCTCGGTACT
CCGAGGTTTCGAATCATACTGAGCCCTATAAACTACAAAAGGGAAGTGGTAGGAGGTGGACAGTGGAGAGAGACTTGGAT
CAGCTGCAACAGTCCAAAACGGGTGAAGCTGATGGCTATCAAGTAATTCATGTCACTGGGAAACATCCGTTTCTGTGGCC
TGACCATTGGCCAGTGAAAAACTATGCCAAGGTCTTCGATTGCCTTGCCTTAGCTCCTGATATAGAAGCTGAAGTAGTCA
AGGTCATATCCAAGATTAAAGATGCAGGGGAAAAAGCAAGACACGAGGCTGCTATTTCCCATAAAAAGAAGAGTATAGAT
GATGGTTCGTTAAATCTGCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAGGACTGGATGATCCACTGCAAGAA
GTGGGAGAAGCGGTCTAACTTGAAGGAAATCTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGATC
TACGCCGGCCGGTTGTGGTTTATCTTGCTGTAGCCGACAGCCTTCTAGAAGATGATTCTGTCACCAGTGGCTGGAGAGTG
GGTATGATTGCCTATGAGAAGAAGAAACTCGGAGTTACTGACATATACGAGAGGCAGCCTTACCTTCTAAAGTCTGCCAT
CGACTTTGAGGTGTGCGCGAGAGCAGATGTGTTTGTTGGCAATAGCTTCTCAACATTTTCCAACCTCGTAGTTTTATCTA
GAACAGAAAGGCTGTATAAGCTGGGGGTGGAAAGCTCATGTGGCGAGGATGTTGGGCTGTCGTCATATGCATACAATGTT
ATTGGAGATGACGGCGGGCCTCAGAGATGGATGACAGATATGTTGGACACAAGCCTTCAGCGCATAAGCTATGGAACAAA
TAACATCTCCTGCCACTGACAGTTGGTTGACCCACATAACATCTGACTGAAACACAATCGCACACAGGAAGGTGATTTTT
TAGCCGGATACTGTCTAGAAATGAGCTTGTCG---------ATGGTACTTTCCATGCTAGAATCTGGGCGGCCACACTA-
-------------ATGAAATGAGTTTGGCCAAGAGCTCTCTGTATTTTGTGAGTGTGTACAAAAGTTGTTTCCTGAGCAG
TATTT----------TTTTTTAGTTTGCAGAGTTAGACTTGTGTGACATT----------T-----------TATATGGT
TCATTGGGAGCAACTTGCTTCACATTATTAGTAACTTAGACGCTGCATGCCACTTTCACATG-AACATGTGTATGAGGTG
CATTATTTCACTTATGTTGTTCCAACATATGA----------AAACTCTCGATTCTGCAGCACTTTGTAATTTCCTTAAG
AAAGATTCTTGTTTGGATGTGCTTTTTCGTGGCAAGTGGAGTCACAAACATCATACTATGTCAACACCTGTTGAGCAAAA
CAAGTTTTTTAGTGGGTGAAGTTCCAAGCTCATGGGATTAACACCTTAGCAAGGAGCACAAGTGGACAGTGGTTTCTGTG
CACACATCTGATTCACCCAACAAGGCTACAGGTAGCACACTTCATTTCTGTTAATATATACAGGAAAAAACAGTACAGTT
GATTCAATCAAGATAAATAGCAGCAGCATGATGAACACATGGTGGTGTTGGATCTGCCTGACAAGGCAATTAGCAGCATA
ATAATCCTTTTAATGAGCATGGGCAATCCTCTCTCTAGCCTGGAAGCGTCATTCCGAACCCGGAGAAGTTGATGTGCTTT
TGGTGAGAAATCCTGAGAGTAAACCACCCAGCTATCTGAACCTGCGTAATGCAATACGGGCTGTGACGAGACGCGGCCCC
CAGGATCTGGATCGCGCGAGGAAGGGATTGAGGAGTAGGTGAGGATTTTGGCTTGGAGAGGAAGAAGGCTGTGAGAACAC
AACAGAGAAACAGGGTGAGATTTCAGAACAATTCACTGATCCTG
>chr7D_7
------AGTTGGAGCGTTACCCTATGAAAGATCTGCTCAGACTAGGTATGAAGGACACCGGCTCAGCTGCTGTGTTCTTG
GTTTTTTTT--TTCTATAGTTGCTGCAGCTTCTGCCAGATCTAAATCCATAGACAAAGTAGTGATTGCTTGCCCTCGCTC
TTGGAGCTGATATGATTTGCAAAGCCATTTGTTAATTGCTCAGGTGTATTTTTTTTCTCTCCTGCAAAAGTCAAGATTTA
TTTCTC-TGAGTAGTGACCAGTGAGCATGATTTTGTTTACATTCATTTTTAGTGAAGTGA-------CCAGTATGTCAGG
CTACCATGCTGACTTCCATATGAAATGATGAAATTTATAAATTGGAATTTGGATGTACAAAAGCTGCTGGCTTAGGTGGT
GTTAGGATAGTTAAACTCCTTACACCGAACATGTATGAGTATAACCTTGCTGTCTATGCTTGCTTTACTAGCGGTCGCCG
CCGACATACCTGGCATTCCGTAA-CCGATGTAAAACGACTCTAGGTGATTTCCTTCGAGCTATGGTTAATTAGTTAATCT
TTACTGTTAAGATAGTTCATCTATGAGGGAATACAGTCAACAGAGGTTGTATGTAGTCACTTGGTAGATTCTGAAATTGC
ATGTGAAGTGTGGCAGTATAATGACCTTGAGTTGTGTCTTTGTTTTCCGTTTCATTTCAGTTGCAGCCTCTCTGGTGGAG
TGTACAGTAAATTGTTACTGGGTTCAAGAAGTATGCTTATACTACTAGTAACTGAATGCCCCGAGCTTGAAACCTAATTT
ACTCATTTCCCAGGAAGAACTGGTGAAGACATCCAAGCGTGTTTGGTTATTGATTCCATTAGAGTTGCAGCACAGTTTGC
ACTTCAACAGCAAAATGAAAGGGAAATGCTGGTCATGTGCCATTGGTTTTGGAATGAGATACC-TGCACCATTGAGTGAT
AAAATCATAAATGACCTTTTGTGACAGGAAGGAATCAAAGAACTGTTTCAATGAACCTCCTGCTAGACCTTAAGCATCTC
AAGCTCATTAGCTTGCCGACGAGGCCTGTCATTTGCAAATGCCTTCTACTAGTGATTGGTCTTATTGTATTGAGAGCGAT
TGTCTCCCCTTTTCTCGCCATTAATTTGTCTGAGAAGAGTTTTTATGAGCCACCAACCCTTGACCTGTTCCCTGGAGTTA
GGAAAGACAAGTTTGTTGAGGTCCCACAGATTATATGGGGATTGAACAATCAGAAGATCGCATTTGCCAGGGCATGCTTG
ACTGCGAAATTCCTGAACAGGTCTCTGCTCATGCCAAGCCTGAGTGCTTCACTTTTCTACAAAGAGGTTGACTTGCTGCA
GCCTATTCCTTTCGACAAGGTGTTTGACTTCAACAAATTCAATGCCCGCTGTCATGGTTTTGCGAGGCTAGCTTGGTACT
CTGAAGTTTCGAATCATACTGAACCCTATAAACTCCAAAAGGGAAGTGGTAGGAGGTGGACAGTGGAGCGAGACTTGGAT
CAGCTGCAAGAATCCAAAACGGGCGAGGCCGATAACTATCAAGTAATTCATGTCACTGGGAAACATCCGTTTCTGTGGCC
TGACCATTGGCCAGTGAAAGACTATGCCAAGGTCTTCGATTGCCTTGCCTTAGCTCCTGAGATAGAAACTGAAGTAGTCA
AGGTCATATCCAAGATTAAAGATGCAGGGGAAAAAGCAAGACACGAGGCTGCTATTTCCCATAATAAGAAGAGGATAGAT
GATGGTTCGTTGAATCTGCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAAGACTGGATGATCCATTGCAAGAA
GTGGGAGAAGCGGTCGAATTTGAAGGAAATCTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGATC
TACGCCGGCCGGTTGTGGTTTATCTTGCTGTAGCCGACAGCCTTTTAGAAGATGATTCAGTAACCAGTGGTTGGAGAGTC
GGTATGATTGCCTATGAGAAGAAAAAACTTGGAGTTACTGACCTATACAAGAGGCAGCCTTATCTTATAAAGTCTGCCAT
TGACTTTGAGGTGTGTGCGAGAGCAGATGTGTTTGTTGGCAATAGCTTCTCAACATTTTCCAACCTTGTAGTTTTGTCTA
GAACAGAAAGGATGTATAAGCTGGGGGTGGAAAGCTCATGTGGCGAGGATGTTGGGCTGTCGTCATACGCGTACAATGTC
ATCGGAGATGATGGCGGGCCTCAAAGATGGATGACAGATATGTTGGACACAAGCCTTCAGCGCATAAGCTACGGAACAAA
TAACATCTCCTGCCACTGACAGTTGGTTGACACGCATAACATCTGACTGAAGCACAATGGAACGCAGGAACAT-AGTTTT
TGGCCGAATCTTATCTAGAAACTAGCTGCTCG---------ACGGTACTTTCCATGCTAGAATCTGGACAGCCACACTGA
CATGCCAGCACTGATGAAATGAGTTTGGCCAAGAGCTGTATGTACTTTGTGAGTGTGTACAAAAGTTCTTTCCTGAGCT-
--------------GTTTTTTAGTTTGCAGAGCTAGACCTGTGTGACACT----------TTCTTTGCTATCTATATGGT
TTATTGAGAGCAGCTTTGCTTCACACTCTTGGACAATTATGATGC--TGCCACTGTCACCTG-AACATTTGTATGAAGTG
CATTGTTTCGCTTACGCTGTT----------ACTACATCGGAAGACTCTTGATTCTGCAGAGCTTTGTAATATCCCGAAG
AAAGATTCTTCTTTCGATGTGTTCTTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3A_228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AAGATTCA
TTTCTC-TGAGTAGTGACGAGTGAGCATGATTTT-TTTACATTCATTTTTAGTGAAGTTA-------CCAATATGTCAGG
CTAGCATGCTGACTTTCATATGAATTGATGAAATTTATAAATTGGAACTTGGATGTAAAAAAGTTGCTGGCTTAGGTGGT
GTTAGGATAGTTAAACTCATTACACTGAACATGTATGAGTATAACCTTGCTGTCTATGCTTGCTTTACTAGTGATCGACA
CCGCCATACCTGGCATTCCGTAA-CAGATGTAAAACGAATCTAGGTTAATTCCTTCAATCTATGGTTAATCAGGTAATAC
TTACTGTTAAGACGGTTCATCTATGAGAGAATCCATTGAAAAAAGGTTCTATGTACTCACTTGGTAGATTTTCAAATTGC
ATG--AATTGTGGCAGTATAATAATCTTGAGTTGTGTCTTTTTTT--CGTTTCATTTCAGTGGCAGCCTCTCTGGTGGAG
CATATAGTAAATTGTCACTGGGTTCAAGAAGTATGCTTGTACTAG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TAATTTGTCTGAGAAGAGTTTTTATGAGCCATCAACCCTTGACCCGTTCCCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6B_942
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTGGGTGAT
GGATAA--AAATGACCTGGTAGAATGAGAAGGAATTAAAGAACTGTTTCAATGAACATCCTACAAGACCTTAAGCATCTC
AAGCACATTAGCTTGCCGGCGAGGCTTATCATTTGCAAGTGCATTCTCATAGTGATTGGCCTTATTGTATTGAGAGCAAT
TATCTCCCCTTTTCTTGCCATTAGCTCGTCTGAGAAGAGCTTTTATGAGTCACCAACCCTTGACTTGTTCCCTGGAGTTA
GGAAAGGCAAGTTTGTTGAGGTCC----GATTATATGGGGATTGAACAATCAGAAGATTGCATTTGCCAGAGCATGCTTG
ACGGCAAAATTCCTGAACCGTTCTCTACTCATGCCAAGTCTGAGTGCTTCGCTTTTCTACAAAGAGGTTGACTTGCTGCA
GCCTATTGCTTTCGACAAGGTATTTGACCTAAACAAGTTCAATGCCCGCTGTCATGGGTTTGTAAGAGTAGCTCGGTATT
CAGAAGTTTCGAATCGTACCGAGCCTTTCAAACTTCAAAAGGGCAGTGGTAGGAGGTGGACAGTGGAGAGAGATTTGGAT
CAACTGCAACAATCCAGATTGGGGGAGGCCGATGGCTTTGAAGTGATTCATGTCACTGGGAAGCATCCATTTCTATGGCC
TGATCATTGGCCAGTGAAAGACTATGCCAGGATCTTTGATTGCCTTGCTGTAGCTCCTGAGATAGAAACTGAAGTTGTCA
GGGTCATATCCAAGATTAAAGATGCAGGGAAAAAAGCAAGACATGATGCTGCCGTTTCTCATAATAAGAAGAGGATAGAT
GGTTTGAAA---AATCTTCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAAGATTGGATGATTCATTGCAAGAA
GTGGGAGCAGCGGTCCAATTTAAAGGAAATTTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGACC
TACGTCGCCCGGTTGTAGTTTATCTTGCAGTAGCCGACAGCCTTCTAGAAGATAATTCAGTAACCAGTGGTTGGAGAGTT
GGTATGGTTGCTTATGAGAAGAAGAAACTTGGAGTTACTGACATATATGAGAAGCAGCCTTACCTTATAAAGTCTGCCAT
CGACTTTGAGGTATGCGCAAGAGCGGATGTGTTTGTTGGCAATAGTTTCTCAACATTTTCCAACCTTGTAGTATTGTCTA
GAACAGAAAGGTTATACAAGTTAGGGAAGGCAAGCTCATGTGGTGAGGATGTTGGGCTGTCGTCCTATGCGTACAATGTC
ATCGGAGATGATGGCGGGCCACAGAAATGGATGACAGATATGTTGGACACAAGCCTTCAGCGCATAAGTTATGGAACAAA
TAACGTCTCCTGCCACTGACCTTCAACACATG----TAACATCTAACCAAGACACAACCGCAGACAGGAAGAT-AG-TTT
TGGCTGAATCTTGTCTAGAAATGAGCAGGTGCAGCAGCTTCACGTTACTTTCCATGCTAGAATCTTGACAGTTGCACTGG
CATGTC-GCACTTACAAAAT-ACTTTGGCCAGGAATTCT-----TTGTGTAAGTGTGTACAGAAGTTGTTTCCTGAGCAG
CATTATGCCAAACAGTTTTTTAGTTTGCAAAGCTAAATGTTGTGTGATGCATTGTTTGCGT-----------TCTGTGGT
TTACCGGGAGGAACTTGCCTCACACTGTAGAG---AATCTGACGC--TGGCACTGTCACATGAAACATTTGTATCAAGTG
TATTCGTTCGTTTATGCTGTT----------A----------AAACTCTTGATTCTGTAGCACCTTGTAATTTCCTTCAG
AATCATTCTTCTTTGGATGTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr6A_942
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTGGGTGAT
GGA-AA--AAATGACCTGGTAGAATGAGAAGGAATTAAAGAACTGTTTCAATGAACATCCTACAAGACCTTAAGCATCTC
AAGCACATTAGCTTGCCGGCGAGGCTTATCATTTGCAAGTGCCTTCTCATAGTGATTGGCCTTATTGTATTGAGAGCAAT
TATCTCCCCTTTTCTTGCCATCAGCTCTTCCGAGAAGAGTTTTTATGACTCACCAACCCTTGACTTGTTCCCTGGAGTTA
GGAAAGGCAAGTTTGTTGAGGTCCCGCAGATTATATGGGGATTGAACAATCAGAAAATTGCATTTGCCAGAGCATGCTTG
ACGGCAAAATTCATGAACCGTTCTCTACTCATGCCAAGTCTGAGTGCTTCGCTTTTCTACAAAGAGGTTGACTTGCTGCA
GCCTATTGCTTTCGACAAGGTATTTGACCTTAATAAGTTCAATGCCCGCTGTCATGGGTTTGTAAGGGTGGCTCGGTATT
CAGAAGTTTCAAATCGTACCGAGCCTTTCAAACTTCAAAAGGGCAGTGGTAGGAGGTGGACAGTGGAGAGAGATTTGGAT
CAACTGCAACAATCCAGATTGGGGGAGGCCGATGGCTTTGAAGTGATTCATGTCACTGGGAAGCATCCATTTCTGTGGCC
TGATCATTGGCCAGTGAAAGACTATGCCAGGATCTTCGATTGCCTTGCTGTAGCTCCTGAGATAGAAACTGAAGTTGTCA
GGGTCATATCCAAGATTAAAGATGCAGGGAAAAAAGCAAGACATGATGCTGCCGTTTCTCATAATAAGAAGAGGATAGAT
GGTTTGAAA---AATCTTCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAAGATTGGATGATTCATTGCAAGAA
GTGGGAGCAGCGGTCCAATTTAAAGGAAATTTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGACC
TACGTCGCCCGGTTGTAGTTTACCTTGCAGTAGCCGACAGCCTTCTAGAAGATGATTCAGTAACCAGTGGTTGGAGAGTT
GGTATGGTTGCTTATGAGAAGAAGAAACTTGGAGTTACTGACATATACGAGAAACAGCCTTACCTTATAAAGTCTGCCAT
CGACTTTGAGGTATGCGCAAGAGCGGATGTGTTTGTTGGCAATAGTTTCTCAACATTTTCCAACCTTGTAGTATTGTCTA
GAACAGAAAGGTTATACAAGTTAGGGAAGGCAAGCTCATGTGGTGAGGATGTTGGGCTGTCGTCCTATGCGTACAATGTC
ATTGGAGATGATGGCGGGCCACAGAAATGGATGACAGATATGCTGGACACAAGCCTTCAGCGCATAAGTTACGGAACGAA
TAACGTTTCCTGCCACTGACCTTCAACACATG----TAACATCTAACAAAGACACAACCGCAGACAGGAAGAT-AG-CTT
TGGCTGAATCTTGTCTAGAAATGAGCAGGTGCAGCAGCTTCACGTTACTTTCCATGCTAGAATCTTGACAGTTGCACTGG
CATGTC-GCACTTGCAAAATGACTTTGGCCAAGAATTGT-----TTGTGTAAGTGTGTACAGAAGTTGTTTCCTGAGCAG
CATTATGCTGAACAGTTTTTTAGCATTC------------TGTGTGATGCATTGTTTGCAT-----------TCTGTGGT
TTACTGGGAGGAACTTGCCTCACACTGTAGAG---AATCTGACGC--TGGCACTTTCACATGAAACATTTGTATCAAGTG
TATTCGTTCGTTTATGTTGTT----------A----------AAACTCTTGATTCTGTAGCACCTTGTAATTTCCTTGAG
AATGATTCTTCTTTGGATGTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6D_959
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AAATGACCTGGTAGAATGAGAAGGAATTAAAGAACTGTTTCAATGAACATCCTACAAGACCTTAAGCATCTC
AAGCACATTAGCTTGCCGGCGAGGCTTATCATTTGCAAGTGCCTTCTCATAGTGATTGGCCTTATTGTATTGAGAGCAAT
TATCTCCCCTTTTCTTGCCATTAGCTCGTCTGAAAAGAGTTTTTATGAGTCACCAACCCTTGACTTGTTCCCTGGAGTTA
GGAAAGGTAAGTTTGTTGAGGTCCCGCAGATTATATGGGGATTGAACAATCAGAAGATTGCATTTGCCAGAGCATGCTTG
ACGGCAAAATTCCTGAACCGTTCTCTACTCATGCCAAGTCTGAGTGCTTCGCTTTTCTACAAAGAGGTTGACTTGCTGCA
GCCTATTGCTTTCGACAAGGTATTTGACCTTAACAAGTTCAATGCCCGCTGTCATGGGTTTGTAAGAGTAGCTCGGTATT
CAGAAGTTTCAAATCGTACCGAGCCTTTCAAACTTCAAAAGGGCAGTGGTAGGAGGTGGACAGTGGAGAGAGATTTGGAT
CAACTGCAACAATCCAGATTGGGGGAGGCCGATGGCTTTGAAGTGATTCATGTCACTGGGAAGCATCCATTTCTATGGCC
TGATCATTGGCCAGTGAAAGACTATGCCAGGATCTTTGATTGCCTTGCTGTAGCTCCTGAGATAGATACTGAAGTTGTCA
GGGTCATATCCAAGATTAAAGATGCAGGGAAAAAAGCAAGACATGATGCTGCCGTTTCTCATAATAAGAAGAGGATAGAT
GGTTTGAAA---AATCTTCCTGTGCAGTACATTGCTGTTCACATGAGAATAGAGAAAGATTGGATGATTCATTGCAAGAA
GTGGGAGCAGCGGTCCAATTTAAAGGAAATTTGCAGCAGCAAAGGAGAGATCATTCATAAGGTCTCACAGATCACTGACC
TACGTCGCCCGGTTGTAGTATATCTTGCAGTAGCCGACAGCCTTCTAGAAGATGATTCAGTAACCAGTGGTTGGAGAGTT
GGTATGGTTGCTTATGAGAAGAAGAAACTTGGAGTTACTGACATATACGAGAAGCAGCCTTACCTTATAAAGTCTGCCAT
CGACTTTGAGGTATGCGCAAGAGCGGATGTGTTTGTTGGCAATAGTTTCTCAACATTTTCCAACCTTGTAGTATTGTCTA
GAACAGAAAGGTTATACAAGTTAGGGAAGGCAAGCTCATGTGGTGAGGATGTTGGGCTGTCGTCCTATGCGTACAATGTC
ATCGGAGATGATGGCGGGCCACAGAAATGGATGACAGATATGTTGGACACAAGCCTTCAGCGCATAAGTTACGGAACAAA
TAACGTCTCCTGCCACTGACCTTCAACACATG----TAACATCTAACCAAGACACAACCGCAGACAGGAAGAT-AG-TTT
TGGCTGAATCTTGTCTAGAAATGAGCAGGTGCAGCAGCTTCACGTTACTTTCCATGCTAGAATCTTGACAGTTGCAGTGG
CATGTC-GCACTTACAAAAT-ACTTTGGCCAAGAATTCT-----TTGTGTAAGTGTGTACAGAAGTTGTTTCCTGAGCAG
CATTATGCCGAACAGTTTTTTAGTTTGCAGAGCTAAATGTTGTGTGATGCATTGTTTGCGT-----------TCTGTGGT
TTACTGGGAGGAACTTGCCTCACACTGTAGAG---AATCTGACGC--TGGCACTGTCACATGAAACATTTGTATCAAGTG
TATTCGTTCGTGTATGCTGTT----------A----------AAACTCTTGATTCTGTAGCACCTTGTAATTTCCTTGAG
AATGATTCTTCTTTGGATGTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
SSSSSS---------S--S----------------------S--------S-S---------------S-----------
S--------SS--------S--------S------------------S----S--S-S----------------------
---------S----S-------------------S---------------------------------------------
---S-SS----------------------------------------------SSSSS-SSSSSSSS-------------
-------------S------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------S--------------S-----------S--------------------------------------------
--S--S---------------------SS------S--------------------------------------------
----------------S-------------------------------S--------------------------S----
-----------S-------------------------------------------------S----------S-------
----S--------------------S---------------------------SS----------------S-------S
------S--S---------SS-------S--S----------S----S-------------S-S----------------
----------------------------------------------S---------S-----------------------
------------------------------------------------S-------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----S-----------S--------------------------------------S-----------------------
--------------------------------S------------S----------------------------------
-S--S-----------------------------S---------------------------------------------
-----------S-----------S--S--S--------------------------------------------------
-------------------S----------------------------------------S------S------------
----------------------------------------------------------------S--------S------
-----------S--------------------------------------------S--------------S--------
---------------S--S-------------------------------------------------------------
----------------------------------------------------------S--S--------S--------S
-----------------------------S------------------------------------S-------------
------------------------------------------------------------------S--------S----
-----------S----------------------------------------------------------S--------S
-----------S--------------------------------------------------------------------
-------------------------------S-S-------------------------------------S-S-S----
-S----S--SS----------------S--------------S------------------------S-S--------S-
---------------------------------------S----------------------------------------
S---S---------------------------S-----S---------S-------------------------------
-S----------------S-----S-S--S-S-SSS-SSSSS-SSSS---------------------S-------S---
----S----S-----------SSSSSSSSSS------------------S------------------------------
----------S----------S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTCAGG
CTAGCATGCTGACA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GTCCAAAACGGGTGAAGCTG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_1442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CAAGGCTAGCTCGGTACT
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3150
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------TCTCTCTAGCCTGGAAGCGT-------------------------------
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--------------------------------------------
