>input_sequence_54348
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--------------------------------------------------------ATGGAAGGCAATAACCTGCCACCT
GGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAATGCACGGTCCAAGCTCCGG
TAATCAGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTTACAGATTC---TGACCACT
TGTCGGAATTTCAATTCAGAGGACAAAGGAAGGCTGATCACCACCAGGTCCACCACCACCACTATCACA----AGAAGGA
CTCCATGAGCGATGATGAGGAGCATGGTCTGAACGAGGATACCACTGATAGCCACAGCAGCAAGGGAAAGAAGGGCTCAG
CATGGCAGCGGATGAAGTGGACGGATTCAATGGTTAAGCTTTTAATTACTGCAGCGTCCTACACTGGTGAGGATCCAGGA
GCTGATTTAGGATGTGGAAGGAGGAACTGTGCAATGGTGCATAAAAAAGGCAAGTGGAAGGCAATATCAAAGGTGATAGG
CGAGCGAGGTTGCAATGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAG
ATATCCTTGGTCGGGGTACAACTTGCAAGGTTGTGGCGAATCCAGCACTTTTGGATCGCATGGATAATCTCTCTGACAAG
TTGAAAGATGACGCAAGGAAGATACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCG
GATTAGTTTGCCTGAAGATCTTCCACTTCAGCGTTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGA
GAGGAGCAAGTGGAGATGCCGATGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCAT
GTGGCGCATAGCAATAAAGGGGGCTTACCCATGCAAAAGAAGATGCGGTATACAGCGGATCACGAGGATGCAGGTTTTGG
GAACTCTTTGAGTGCACACGAATGTAGCCAGAGGTCTAATCCCCATGGCATCGCACTAGATATCAACAAAGTTGTTCCAG
ATGGAACCAGCTTGGCTTTGACACAGAAGGGCTTAGTATTGCAATCTGCAGAACTTGAAAAACAGTGCTTGAAAATCGAA
AATGAGGCACTGGAGCTTGCAGAACAACGCCTCAAGTGGGAACTATCCAGTAAAATTAAGGACAAGGAACTGGAAAGGAT
GAGGTCAGATAACGAACATATGAAGATTGAGATTAAACGCTTAGAACTGGAGGTAAGGCGCAAAGAGTTAGAGCTTGAAC
TCAAGCTGAAAGGAAATGTCAATCATTCATGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G124200
AGATACGGAATAGAAGACAGATTACAAATGGTAGATTACCAAATACATGTAAATATCTCTCTCTAACAATAACAACACCA
CTTCCTTTACCAAAAGGGAGAAA-AAA---GAGAGAAAGAAATGGAATGTTGTTGACAGAAAGTCGTCTTCCCCATCGCC
GGCAC-GCCGAAACGCCCTTCGCTGTCGCCGCC--AAGCTCGCTTCGCCCCCTCCTTCCGCCGAACCACGCCTGGAGATC
TCCCTCGTGGGCATTCTTTCTCGTCCTCTCTATTGGTAGCGAGTGAAGACCTACCCGGACGCGATTCTTCTTCTTGGTAA
GGAAGCCCTATCTTGCTCGGATTGTTCTTCGGCCTTCACTAGCCTTCTCTTCGATTTGACTATTCTATTGCTGCCAGATC
TTTCTCCCTGACCCCATTCAGTTGACAGAAGAGCACCCTTCGGCG---ATTATTAATGAATTTGTTCAGATAGTGACTTG
TTTCTTTTGCCTGCTCCTTCTCTGAAACCTGAATCCCACGCATATGTAACTTAGGTCTGATGCACATATGTAACTCTGAT
GCTCTACTTCAAATTCTTCTTTAGCTCTACTATTTGTTAGTTTGATGCCGTTCAACTGATTAG-ATCTTTACATCATGTT
GCTGGTCGTTTAGGCAGTTTCACTCAAGTATCGAGCTGTGCTCTGACG--TAAGAGACTGCAATCTTTTCGAATTTACTG
TTGAACTGTGCCGAAGAAACCCAACTCACTGCTTGCACATTAATAGTTATACCAAATCTAGGACGGTCTCAGTTCGCAAT
ATAGGTGATTTTGATTAAAGTGCAATCTGTGTGTTTACGGGCAGATTTGTATCGTTAAGAAGTTCTCAAATGTGTAATCA
GTATTGACCGCTCAATAGTTCTTCTGAATTACTTTCTTGCGTTGGATTTCAGGCTGAAGAAGTAGTGCCAAATTCTACAT
CCGTATTTG-----------------------------------------------------------------------
------------GTATTATATAAGACGGATTAGTAGTGGAATGATCCTTTGGGAGAATGGAAGGCAATAACCTGCCACCT
GGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAATGCACGGTCCAAGCTCCGG
TAATCAGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTTACAGATTC---TGACCACT
TGTCGGAATTTCAATTCAGAGGACAAAGGAAGGCTGATCACCACCAGGTCCACCACCACCACTATCACA----AGAAGGA
CTCCATGAGCGATGATGAGGAGCATGGTCTGAACGAGGATACCACTGATAGCCACAGCAGCAAGGGAAAGAAGGGCTCAG
CATGGCAGCGGATGAAGTGGACGGATTCAATGGTTAAGCTTTTAATTACTGCAGCGTCCTACACTGGTGAGGATCCAGGA
GCTGATTTAGGATGTGGAAGGAGGAACTGTGCAATGGTGCATAAAAAAGGCAAGTGGAAGGCAATATCAAAGGTGATAGG
CGAGCGAGGTTGCAATGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAG
ATATCCTTGGTCGGGGTACAACTTGCAAGGTTGTGGCGAATCCAGCACTTTTGGATCGCATGGATAATCTCTCTGACAAG
TTGAAAGATGACGCAAGGAAGATACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCG
GATTAGTTTGCCTGAAGATCTTCCACTTCAGCGTTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGA
GAGGAGCAAGTGGAGATGCCGATGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCAT
GTGGCGCATAGCAATAAAGGGGGCTTACCCATGCAAAAGAAGATGCGGTATACAGCGGATCACGAGGATGCAGGTTTTGG
GAACTCTTTGAGTGCACACGAATGTAGCCAGAGGTCTAATCCCCATGGCATCGCACTAGATATCAACAAAGTTGTTCCAG
ATGGAACCAGCTTGGCTTTGACACAGAAGGGCTTAGTATTGCAATCTGCAGAACTTGAAAAACAGTGCTTGAAAATCGAA
AATGAGGCACTGGAGCTTGCAGAACAACGCCTCAAGTGGGAACTATCCAGTAAAATTAAGGACAAGGAACTGGAAAGGAT
GAGGTCAGATAACGAACATATGAAGATTGAGATTAAACGCTTAGAACTGGAGGTAAGGCGCAAAGAGTTAGAGCTTGAAC
TCAAGCTGAAAGGAAATGTCAATCATTCATGACATATATTTAGGCGGTCAAGATTGGCCTGTAAGATGGTAAGCTAAGAA
TACTATTCTTGCTTAAGGAGCCTTCTAGTTCACTGGTGCAACCTTTTCCGTTCAGCAAGTCTGGTATTTATATGCTTCTA
AGTGGTGTTTGCTCT-GGATGATCACTTTATTTCATTTGTTTTTGTATTTTAACCTATAATTTTTTGAAAGTTTGGTAAC
AGCTTGCAATTTTCGTTCTTGCTTAGGGAGCCTTCTAGTTCTAACTAATGTGCATTAGGAATGTAAATTGGTTGCATCAT
TAGTATTTAGCAAGGTTCTTTTAAGTGCTAGGTGCTCAGCGAGCGGTGTGCCTCTGCTTAGTGCAATGATAGCTTAAGCG
GTGCTTGAGCATTTTGTACGGACATCGACATGAACAAGGGACACCCAGAAATCAAATTTTAAAGCATGTAAGGCCACCTT
GCTCTCTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCC
TCTCTCTCTCGCCTAGCCGAACATCCCTTTCCCTCTCTTTTGCCCCCAAATTGGTGCCGCTCCTACCTGCATGTCCTCGC
CTAGCCGCCGCTTAGTTTCCACTTAGCTGGCGCCGCACCCCTGAGTGTACACCAAGCGCTTAGGCGCTATGCCTAGGCGT
CTGGGCGCTTTTTTCAGTGCTAAT-CCAAAAGCGAAGTGGTAGGCCTCTGCTCAGCGCTTAAGCGCGCCTAGGCGTACGC
TCAATTTTTTACTGTTTTTAGCAACTGTACTAATGCTTGCTGCCATATGCACAGTATTATATTCGTTTGTCATTTTTTTC
TCTTTCTTTCTTTCTTGTTTATGAGCGATTTGTTCAGCCTTAATGCCTGGCATTCTTGGCAATAAAATTATAGTTGCATC
CAAAGATGCAGCAGCCAGGAGGCTTGCCTTTCCTTGAAAAAAACATGGCATATTCGTGTGCTCTGTGCATTGGA
>chr5D_67
------------------------------------------------------------------CAATAACAACACCA
CTTCCGTTACCAAAAGGAAAAAAGAAA---GAAAGAAAGAAATGGAATGTTGTTGACAGAAAATCGTCTTCCCCATCGCC
GGCACCGCCGAAACGCCCTTCGCTGTCGCCGCC--AAGCTCGCCTCGTCCCCTCCTTCCGCCGAACCACGCCTGGAGATC
TCTCTCGTGGGCATTCTTTCTCGTCCTCTCTATTGGTAGCGAGTGAAGACCTACCCGGACGCGATTCTTCTTCTTGGTAA
GGAAGCCCTATCTTGCTCGGATTGTTCTTCGGCCTTCACTAGCCTTCTCTTTGATCTGATTATTCTATTGCAGCCGGATC
TTTCTCCCTGACCCCATTCTGTTGACAGGAGAGCACCCTTCGGCG---ATTAAG---GAATTTGTTCAGATAGTGACTTG
TTTCTTTTGCCTGCTCCTTCTCTGAAACCTGAATCCCACGCATACGTAACTTAGGTCTGATGCACATATGTAACTCTGAT
GCTCTACTTCAAATTCTTCTTTAGCTCTACTATTTGTTAGTTTGATGCCGTTCAACTGATTAATATCTTTACATCATGTT
GCTGGTCGTTTAGGCAGTTTCACTTAAGTATCGAGTTGTGCTCTGATG--TAAGAGACTGCAATCTTTTCGAATTTACTG
TTGAACTGTGCCGAAGAAATCCAACTCACTGCTTGCACATTAATAGTTATATCAAATCTAGGACGGTCTCAGTTCGCAAT
ATAGGTGATTTTGATTAAAGTGCAATCTGTGTGTTTACGGGCAGATTTGTATCGTTTAGAAGTTCTCAAATGTGCAATCA
GTATTGACTGCTCAATAGTTCTTCTGAATTACTTTCTTGCGTTGGATTTCAGGCTGAAGAAGTAGTGCCAAATTCTACAT
TCGTATTTGGTACTCCCTCTGTAAACTAATATAAGAGCGTTTAGATCACTAAAATAGTAATCTAAACGCTCTTATATTAG
TTTACAGAGGGAGTATTATATAAGACG------TAGTGGAATGATCCTTTGGGAGAATGGAAGGCAATAACCTGCCACCT
GGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAATGCACGGTCCAAGCTCCGA
TAATCCGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTTACAGCTTC---TGACCACT
TGTCGGAATTTCAATTCAGAGAACAAAGGAAGGCTGATCACCACCAGGTCCACCACCACCACTATCCCA----AGAAGGA
CTCCATGAGCGATGATGAGGAGCATGGTCTGAACGAGGATACCACTGATAGCCACAGCGGCAAGGGAAAGAAGGGCTCAG
CATGGCAGCGGATGAAGTGGACTGATTCAATGGTTAAGCTTTTAATTACTGCAGCGTCCTACACTGGTGAGGATCCAGGA
GCTGATTTAGGATGTGGAAGGAGGAACTGTGCAATGGTGCATAAGAAAGGCAAGTGGAAGGCAATATCAAAGGTGATGGG
CGAGCGAGGTTGCAATGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAG
ATATCCTTGGTCGGGGTACAACTTGCAAGGTTGTGGAGAATCCAGCACTTCTGGATCGCATGGATAATCTCTCTGACAAG
TTGAAAGATGACGCAAGGAAGATACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCG
GATTAGTTTGCCTGAAGATCCTGCACTTCAGCGTTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGA
GAGGAGCAAGTGGAGATGCCGATGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCAG
GTGGCGCATAGCAATAAAGGGGGCTTACCCATGCAAAAGAAGATGTGGTATACAGCGGATCACGAGGATGCTGGTTTTGG
GAACTCTTTGAGTGCACACGAATGTAGCCGGAGGTCTAATCCCCATGGCATCACACTAGATATCAACAAAGTTGTTCCAG
ATGGAACCAGCTTGGCTTTGACACAGAAGGACTTAGTATTGCAATCTGCAGAGCTTGAAAAACAGTGCTTGAAAATCGAA
AATGAGGCACTGGAGCTTGCAGAACAACGCCTCAAGTGGGAACTATCCAGTAAAATTAAGGACAAGGAACTGGAAAGGAT
GAGGTCAGATAACGAACATATGAAGATTGAGATTAAACGCTTAAAACTGGAGGTAAGGCGCAAAGAGTTAGAGCTTGAAC
TCAAGCTGAAAGGAAACGGCAGTCATTCATGACATTTATTTAGGCGATCAAGATTAGCCTGTAAGATGGTAAGCTAAGAA
TACTATTCTTGCTTAAGGAGCCTTCTAGTTCACTGGTGCAACCTTTTCCGTTCAGCAAGTCTGGTATTTATATGCTTCTA
GGTGGTGTTTGCTCACGGATGATCACTTTGTTTCATTTGTTTTTGTATTTTAACCTATAATTTTTTGAAAGTTTGGTAAC
AGCTTGCAATTTTCGTTCTTGCTTAGGGAGCCTTCTAGTTCTAACTAATGCGCATTAGGAATGTAAATTGGTTGCATCAT
TAGTTTTTAGCAAGGTTTTTTTAAGCGCTAGGCGCTGAGCGAGCGGTGTGCCTCTGCTTAGTGCAATGATAGCTTAACCG
GCGCTTGAGCGTTTTGTACGGACATCGACATGAACAGGGGACACCCAGAAATCAATTTTTAAAGCATGTAAGGCCGCCTT
GCTCTGTGCTCTCTCTCTCTCTCACCCCACTCTCCTCTGTCTAAC-----------------------------------
-----------CCTAGCCGAACATCCCTTTCCCTCTCTTTTGTCCCCAAATTGGTGCCGCTCCTACCTGCATGTCCTTGC
CTAGCCGCCGCTTAGTTTCCGCTTAGCTGGCGCCGCACCCCTGAGTGTACGCCAAGCGCTTAGGCGCTATGCCTAGGCGT
CTGGGCGCTTTTTTCAGCGCTAACCCCAAAAGTGAAGCAGTAGGCCTCCGCTCAGCGCTTAAGCGCACCTAGGCGTACGC
TCAATTTTTCACTGTTTTTAGCAACTGTACTAATGCTTGCTGCCATATGCTCAGTATTATATTCGTTTGTCATTTTTTTC
TCTTTCTTTCTTTCTTGTTTATGAGCGATTTGTTCAGCCTTGATGCCTGGCATTCTTGGCAATAAAATTATAGTTGCATC
GAAAGATGCAGCTGCCAGGAGGCTTGCTTTTCCTTGAAAAGAACATGGCATATTCGTGTG-TCTGTGCATTGGA
>chr5B_88
--------------------------------------------------------------------------------
-------TACCAAAAGGAAAAAAGAAAAGAGAAAGAACGAAGTGCAATATCGTTGACAGAAAATCGTCTTCCTCATCGCC
AGCACGGCTGAAACGCCCTTCGCTGTCAAAAAAGAAAGCTCGCCTAGTCCCCTCGTTCCGCCGAACTATGCCTGGAGATC
TCCCTCGTGGGCATTCTTTCTCGTCCTCTCTATTGATAGCGAGTGAAGACCTACCCGGACGCGATTCTTCTTCTTGGTAA
GGAAGCCCTATCTTGCTCGGATTGTTCTTCGGCCTTCACTAGCCTTCTCTTCGATCTGATTATTCTATTGCAGCCAGATC
TTTCTCCCTGACCCCATTCAGTTGATAGGAGAGCACCCTTCGGTAATTATTAAG---GAATTTGTTCAGATAGTGACTTG
TTTGTTTTGCTTGCTCCTTCTCTGAAACCTGAATCCCATGCATACGTAACTTAGGTCTGATGCACATATGTAACTCTGAT
GCTCTACTTCAAATTCTTCTTTAGCTCTCCTATTTGTTAGTTCGATGCCATTC-ACTGATTAAAATCTTTACATCATGTT
GCTGGTCATTTAGGCAGTTTCACTTAAGTATTGAGTTGTACGCTAATGTATAAGAGACTGCAATCTTTTTGAATTTACTG
TTGAACTGTGCCGAAGAAACCCAACTCACTGCTTGCACATTAATAGTTATATCAAATCTAGGACGGTCTCAGTTTGCAAT
ATAGGTGATTTTGATTAAAGTGCAATCTGTGTGTTTACGGGCAGGTTTGTATCGTTTAGAAGTTCTCAAATGTGCAATCA
GTATTGACTGCTCAATAGTTCATCTGAATTACTTTCTTGCGTTGGATTTCAGGCTGAAGAAGTAGTGCCAAATTCTACAT
TCGTATTTG-----------------------------------------------------------------------
------------GTATTATATAAGACGTTTTAGTAGTGGAATGATCCTTTGGGATAATGGAAGGCAATAACCTGCCACCT
AGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAATGCACGGTCCAAGCTCCGG
TAATCAGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTTACAAATTC---TGACCACT
TGTCGGAATTTCAATTCAGAGAACAAAGGAAGG-TGATCACCACCAGGTCCACCACCACCACTATCACA----A-AAGGA
CTCCATGAGCGATGATGAGGAGCATGGTCTGAACGAGGATACCACTGATAGCCACAGCGGCAAGGGAAAGAAGGGCTCAA
CATGGCAGCGGATGAAGTGGACCGATTCAATGGTTAAGCTTTTAGTTACTTTAGCGTCCTACACTGGTGAGGATCCAGGA
GCTGATTTAGGATGTGGAAGGAGGAACTGTGCAATGGTGCATAAGAAAGGCAAGTGGAAGGCAATATCAAAGGTGATGGG
CGAGCGAGGTTGCAATGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAG
ATATCCTTGGTCGGGGTAGAACTTGCAAGGTTGTGGAGAATCCAGCACTTCTGGATCGCATGGATAATCTCTCTGACAAG
TTGAAAGATGACGCAAGGAAGACACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCG
GATTAGTTTGCCTGAAGATCCTGCACTTCAGCATTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGC
GAGGAGCAAGTGGAGATGCCGATGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCAT
GTGGCACATAGCAATAAAGGGGGCTTACCCATGCAAAAGAAGATGCGGTATACAGCAGATCACGAGGATGCTAGTTTTGG
GAACTCTTTGAGTGCACACGAATGTAGCCGGAGGACTAATCCCCATGGAATCGCACTAGATATCAACGAAGTTGTTCCAG
ATGGAACGAGCTTGGCTTTGACATAGAAGGACTTAGTATTGCAATCTGCAGAGCTTGAAAAACAATGCTTGAAAATCTAA
AATGAGGCGCTGGAGCTTGCAGAACAACGCCTCAAGTGGGAACTATCCAGTAAAATTAAGGACAAGGAACTGGAAAGGAT
GAGGTCAGATAACGAACATATGAAGATTGAGATTAAACGCTTAGAACTGGAGGTAAGGCGCAAAGAGTTAGAGCTTGAAC
TCAAGCTGAAAGGAAATGGCAGTCATTCATGACATTTATTTAGGCGATCAAGATTAGCCTGTAAGATGGTAAGCTAAGAA
TACTATTCTTGCTTAAGGAGCCTTCTAGTTCACTGGTGCAAACTTTTCCGTTCAGCAAGTCTGGTATTTATATGCTTCTA
GGTGGTGTTTGCTCACGGATGATCACTTTGTTTCATTTGTTTTTGTATTTTAACCTATAATTTTTTGAAAGTTTGATAAC
AGCTTGCAATTTTCGTTCTTGCTTAGGGAGCCTTCTAGTTCTAACTAATGCGCATTAGGAATGTAAATTGGTTGCATCAT
TAGTTTTTCGCAAGTTT-TTTTAAGCGCTAGGCGCTGAGCGAGCGGTGTGCCTCTGCTTAGTGCAATGATAGCTTAAGCG
GCGCTTGAGCGTTTTGTACGGACATCGACATGAACAGGGGACACCCAGAAATCAATTTTTAAAGCATGTAAGGCCGCCTA
GCTCTCTGCTCTCTCTCT-----------CTCTCCTCTGTCTAAC-----------------------------------
-----------CCTAGCCTAACATCCCTTCACCTCTCTTTTGCCCCCAAATTGGTGCCGCTACTACTTGCATGTCCTCGA
CTAGCCGCTGCTTAGTTTCTGCTTAGTTGGCGCCGCATCCCTGAGTGTACGCCACGCTCTTAGGC---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr1B_992
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------TTTGGGATAATGGACCGCAGTAACCTACCTCCT
GGAAACACGACGCAAGGAGCTCCTTATGGTAGTTTGAATGTACATGGTAACTCCATGCAAATGCATCCTCCAAGCTCAGG
AAAACATCTATTCAACCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCTACAGAGCATGATAACCCCG
GATCCGGATTTCAGTTTGTAGAACATGGAAAAAAGGATCACCACCAGCAGCAGCAGCAGCACAACCATCTTATA-AAGAA
CTCCATCAGTGACGACGAGGAGCATGATATGACCGAGGATACTACTGATGCCCAGAGTGGCAAGGGCAAAAAAGGCTCGG
CATGGCATCGGATGAAGTGGACTGGTTCAATGGTTAAGCTTTTGATTACCGCAGCGTCTTACACGGGGGAGGATCCTGGG
GCGGATTTGGGCGGCGGGAGGAGGAACATTACAGTAATGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTTATGGG
TGAAAGAGGCTGCAACGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGG
ATATCCTTGGTCGTGGTACTGCTTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTGTCTGATAAG
ATGAAAGAAGATGCAAGGAAGATATTGAACTCTAAGCATTTATTCTATGAGATGATGTGTTCCTATCATAACAACAACCG
TGTGAATTTACCCGAAGATCCTGCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCCGAGGA
GGGATGCAAGTGGAGATGCTGAAGAAGATGACCACAATGCAGATTCTGATTATGAGGATC---ATGACGAAGAGCATCAA
GCAGTTCATCACAGTATGAGGGATCCTCCCATGAATAAAAGGATGTGTCATGCATTGGATCATGGTGATGTAGGTTTTCT
CACCTCAAGCTCGAATGATGGCAGTGGGAGTTTGG---ATCCCCATGGCATCGCATTGGATATCAACAAAGTTTTTCCGG
ATGGAACCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1A_992
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TTTGGGAAAATGGACCGCAGTAACCTACCTCCT
GGAAACACGACGCAAGGAACTCCTTATGCTAGTTTGAATCTACATGGTAACTCCTTGCAAATGCATGCTCCAAGCTCAGG
AAAACATCTATTTAACCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCTACAGAACATGATAACCCCG
GATCCGGATTTCAGTTTGTAGAACATGGAAAAAAGGATCACCACCAGCAGCAGCAGCAGCACAACCATCTCATA-AAGAA
CTCCATCAGTGACGACGAGGAGCATGATATGACTGAGGATGCTACTGATGCCCAGAGTGGCAAGGGCAAGAAAGGCTCAG
CATGGCATCGGATGAAGTGGACTGGTTCGATGGTTAAGCTTTTGATTACCGCAGCATCTTACACGGGGGAGGATCCTGGG
GCGGATTTGGGCGGCGGGAGGAGGAACATTACAGTAATGCAGAAGAAGGGCAAGTGGAAAGCAATATCAAAGGTCATGGG
CGAAAGGGGCTGCAATGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGG
ATATCCTTGGTCGTGGTACTGCTTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTTTCCGATAAG
ATGAAAGAAGATGCAAGGAAGATATTGAACTCTAAGCATTTATTCTATGAGATGATGTGTTCCTATCATAACAACAACCG
TGTGAATTTACCCGAAGATCTTGCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCCAAGGA
GGGATGCAAGTGGAGATGCTGAAGAAGATGACCATAGTGCAGATTCTGATTACGAGGA----------------------
--------------------------------------------------------------------------------
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>chr1D_1253
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AAGAA
CTCCATCAGTGATGACGAGGAGCATGATATGACCGAGGATGCTACTGATGCCCAGAGTGGCAAGGGCAAGAAAGGCTCAG
CATGGCATCGGATGAAGTGGACTGGTTCGATGGTTAAGCTTTTGATTACCGCAGCATCTTACACGGGGGAGGATCCTGGG
GCGGATTTGGGCGGTGGGAGGAGGAACATTACAGTAATGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTCATGGG
TGAAAGAGGCTGCAACGTGTCACCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGG
ATATCCTTGGTCGTGGTACTGCTTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTTTCCGATAAG
ATGAAAGAAGATGCAAGAAAGATATTGAACTCTAAGCATTTGTTCTATGAGATGATGTGTTCCTATCATAACAACAACCG
TGTGAATTTACCCGAAGATCTTGCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCAAAGGA
GGGATGCAAGTGGAGATGCTGAAGAAGATGACCACAGTGCAGATTCTGATTACGAGGA----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-----S-----------S-S------------S-----------------------------S-----------------
-------------------------------------------S---S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S---S-----------S--------
----------------------------S-----------------------SSSSS-----------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------S-----------------
------------------------S----------S----------S---------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------S-----------------S-----
--------S-----------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----------------------------------------------------------S---------------------
----------------------S---------------------------------------------------------
--------------------------------------------S--------------------------------S--
--------------------------------------------------------------------------------
------------------------------------S-------------S-----------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
------------------------------S---------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--S-------------S----------S--------S------------------------
--------------------------------------------------------------------------------
S-------------S--------------S--------------------------------------------------
--------------------------------------------------S-----------------------------
----S------------S-------S------S---S-------------------------------------------
-S--------S-------------------------S------------------S-------------------S----
---------S-------------S-S-SSSSSSS----S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------------------------------------------------------------------
--------------------S-----------------------------S-----------------------------
-----------------S-----S--------S----SS---------S-----------------S-------------
---------S----------------------------------------S-----------------------------
-----------------------------------------S--------------------------------------
S-----------S--------------S------------S-------------------S-------------
>forward_454
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------AGCACCCTTCGGCGATTATT--------------------------
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>reverse_1419
--------------------------------------------------------------------------------
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----------------------------------------------------------AGCAAGGGAAAGAAGGGCTC--
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--------------------------------------------------------------------------
>forward_455
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------AGCACCCTTCGGCGATTATTA-------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_1863
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CCACTTCAGCGTTCACTGCA--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_1419
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TACCACTGATAGCCACAGCA---------------------
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>reverse_2938
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------TCTCCCTCTCCCTCTCCTCT---
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--------------------------------------------------------------------------
