>input_sequence_54347
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---------------------------------------------------------------ATGTCCCTCGCGCCTCC
TCCGTGCCCGCCTCCTCTGCTCCGCCTCCGCGCGCCCCGCCGCGACGCCGCCCTCTCCGCCGCCGTCCCATCCCGCTCTC
TCTCCGGATGCCTTGCCATCGGGCGGGGTCCCGGCTCTGGCCGCGCCTACTGCCTCTTCTCCGGTACCGGCGCCGGCCGC
CGGAAGCAGGTACTCGTGGCGCCCGTCTCTTTACTAGACCAATCATCTTCCGCGAGCAAGATCTGTCCGGGTTTTAGAT-
---TTGCTCTGGGTTCAGATTTTGGGCTGATGCCTTTGGCTGGCG------AGTGCAAGGTGTTAACCTGCTAAATGCTG
CTGAAACTGTAGCTAGAATTCAGT----------TCTTAATCCTGCGTTGAGTTGTCAGTTGAGGCTAACGTTGGG----
----ACACATTCAG-ATGCTGGATTTCTGTGTGATGTTTTGTTTTTAATCTTGTGTAAGAACATAGACAAATCGAATTGG
GATGATACTGTTCCTGCAAGTACCATGTTTTGACCTTGTTGGTTGAGATTTGATGGTTGCAGACAACCGAGATTGTTCTG
AACTGTACACTGTTAAGTAC------TATCAAACTGCCCACTTTGATCTATGATAGGCATTGTTGGGCTACAATCTCGAT
AAG--TATAAAATTGACATTTATTCCTGCGAGAATCTAGTGTTACTTG--------TATCTTCCATGGTTAGACAATCAA
GAGGAACAAAAATATTAACATAACCAGTTGTGTACTTTCC-TGCAGGATGAAGCTAGGATAGGGCTGGAGAGTGCATACG
ACCAGAAAAAGACGGGGTTCGGGACATGGGGCG---------ATACAAGGCGGCAAAGAGACTGGCGTGGTGGTCCTGCT
CCTGCTGCCGTTGGCGGTGGTGGTGGCAGGGGAAGGTCT---------GGAGGAGGAGG------AGGAGGTGGTGGTTG
GTTCAGGTGGTTTAGCAGCGGAGGCTTCTGGGACGCGGTGAAGCAGACCGTTCTGACGATCCTCGGCATTATCGCGGCGG
TAAGCGGGGAATGTCCTGTGTTACTATATCTAGTCCTTTCTGTAAAACATACTTATATAGTAGTGCTAACACTTGCTCAA
CTTTGCATTGCAGGTCTTCCTCATCGCGAATTTCAACGTGCTTCTGGGAGCTGCCGTCTATCCGTTGCTGGTCGTGCTGC
GGCAGATACGGCGCGCAATCACCTTTGCGGCTTATTGTGTTTCTCGGGCCATGTCGGCGCCCGCTTCCAGGCCGAAACCA
ACTCCTGTAGACGACGCCGAAGTGGTGGCTGCAGCGCCTGTCAAAGAAAGAGCCAGAATGTCTGCAGCAGAAAGAGTTGT
TGCGAAATGGCGTTCGGACTGA----------------------------------------------------------
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>chr4B_1_TraesCS4B01G008200
AATATCTCACTATCACTCATCCTAAAATTTCCTTTGATGTTCAACAAGCATGTCTCCATATGCATGATCCACGGCTTCCA
CATTATAGTCATGTCAAATCGTGTTCTTACGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATACGTCCATTC
TTCATTCTCTCACCACATACTCTGATGCAGACTGGATTGGTTGTCCAGACACTCGACGATGCACATCCGGATTTTGTGTT
TTTTT--CGGTA--ACAATTTGATTTCTTGGTCCTCGAAAAGATAGGTTACGGTCTCTCGCTCATCCGCTGAAGCTGAGT
ACCGTGCTGTGGCACATGCTGTCGCTGATACTATTTGGGTTTGTCAGTTGCTCTCAGAACTGCACCGACCGGTTGAGCAG
GCTACTATTATATATTGTGATAATATTTCAACTGTTTACATGTCTGGGAATCCTGTTCAGCATCGCCGGACCAAACATAT
TGAGATTGATATTCACTTTGTTCATGAGAAGATGGCTCTTGGACAAGTTCGGGTGCTCCATGTTGCTACTATGGCTCCAA
TTTGCTGACATCTTCACCAAA-GGACTTGCTACTAAGCCATTTCAAGACATACATTTCAATGGCAACGTCATCGAGCCTC
CCGTTGATACTGCG--------GG-GGGATGTTAGATTGTTCCTTAGATCACAAGTTTCCTAGTCCAAGTCGGTTGTCGT
CCGCTATCTGACGGCAAAGCTTTTTTGACGTCTGCTAGCAGACGGCAAAGAAGTGGCTGATGGTAAATGTGATCTTTGCC
ATCAGCCAGTTTTTTGCCGCCTGTTTTTTTGGAAGCTGACGGTTGTACATGTCCTAACAGAGTTTCTTTTTTCATGAACA
GATTTTGTTTTTGCCCTAAAAAAATTAGTGAAAAACAACAAGCCCTAATCTTGTGTGGGACCCATGTGCTAGAGACTGGA
GAGCAGGCTCAGTAGCCAGCCAAG---------AAAGCCATAGCCCGGAGCTTCAGATTAGCCATGTCCCTCGCGCCTCC
TCCGTGCCCGCCTCCTCTGCTCCGCCTCCGCGCGCCCCGCCGCGACGCCGCCCTCTCCGCCGCCGTCCCATCCCGCTCTC
TCTCCGGATGCCTTGCCATCGGGCGGGGTCCCGGCTCTGGCCGCGCCTACTGCCTCTTCTCCGGTACCGGCGCCGGCCGC
CGGAAGCAGGTACTCGTGGCGCCCGTCTCTTTACTAGACCAATCATCTTCCGCGAGCAAGATCTGTCCGGGTTTTAGAT-
---TTGCTCTGGGTTCAGATTTTGGGCTGATGCCTTTGGCTGGCG------AGTGCAAGGTGTTAACCTGCTAAATGCTG
CTGAAACTGTAGCTAGAATTCAGT----------TCTTAATCCTGCGTTGAGTTGTCAGTTGAGGCTAACGTTGGG----
----ACACATTCAG-ATGCTGGATTTCTGTGTGATGTTTTGTTTTTAATCTTGTGTAAGAACATAGACAAATCGAATTGG
GATGATACTGTTCCTGCAAGTACCATGTTTTGACCTTGTTGGTTGAGATTTGATGGTTGCAGACAACCGAGATTGTTCTG
AACTGTACACTGTTAAGTAC------TATCAAACTGCCCACTTTGATCTATGATAGGCATTGTTGGGCTACAATCTCGAT
AAG--TATAAAATTGACATTTATTCCTGCGAGAATCTAGTGTTACTTG--------TATCTTCCATGGTTAGACAATCAA
GAGGAACAAAAATATTAACATAACCAGTTGTGTACTTTCC-TGCAGGATGAAGCTAGGATAGGGCTGGAGAGTGCATACG
ACCAGAAAAAGACGGGGTTCGGGACATGGGGCG---------ATACAAGGCGGCAAAGAGACTGGCGTGGTGGTCCTGCT
CCTGCTGCCGTTGGCGGTGGTGGTGGCAGGGGAAGGTCT---------GGAGGAGGAGG------AGGAGGTGGTGGTTG
GTTCAGGTGGTTTAGCAGCGGAGGCTTCTGGGACGCGGTGAAGCAGACCGTTCTGACGATCCTCGGCATTATCGCGGCGG
TAAGCGGGGAATGTCCTGTGTTACTATATCTAGTCCTTTCTGTAAAACATACTTATATAGTAGTGCTAACACTTGCTCAA
CTTTGCATTGCAGGTCTTCCTCATCGCGAATTTCAACGTGCTTCTGGGAGCTGCCGTCTATCCGTTGCTGGTCGTGCTGC
GGCAGATACGGCGCGCAATCACCTTTGCGGCTTATTGTGTTTCTCGGGCCATGTCGGCGCCCGCTTCCAGGCCGAAACCA
ACTCCTGTAGACGACGCCGAAGTGGTGGCTGCAGCGCCTGTCAAAGAAAGAGCCAGAATGTCTGCAGCAGAAAGAGTTGT
TGCGAAATGGCGTTCGGACTGAATTAGAGGATATTTCAATGCCTTGCGAGTTATACTGTTTTTCCGCTGGTCAGATAGTT
TTCATACCATGACTGTACAAGTTCTATTTCTTGTTTTCGAGTAAGTGGCAGGAGCGA--ACTTTATATTAGAAGTAGATG
GTGCTACAGTTATTTACAAGCAGACATTTGAATGAGTTAATTA-TAAGCACTATTTCTGTGCAAGATACCTCGGAAAGTC
CACATTTACTTGTAGCTGGTGGTTGGATTTGAGCTCTGGACTTGATCGGCGATATATATGGTTATACAGGCAGCTTTCAA
CAGCAGCAGACTAGGCCTGCCAAGTCTGAACTCTGAGAATGTTTTCAGTTCATGTTCAACTTTGGTCCTGTTTTCAGTTC
ATGTTCGAAGTAACTTTCCTGTGTGAATCTGGGAAGCTCACTG-------------------------------------
------------AAACCTATGTTTCGTTGTGCATATTCAGCCTATTCGGGCCGAGTTTCAGGATGATCATAAATAGACCT
CACTTTAAGTTATGATGCTGATATGTGTGTGCTGCACCATCGTCCAT-ATCTTTGTTTTCAGGCAGTTTCATGGCAAATC
AAATACTCCTTCCGATCCAAAATAAGTGTCAGCCATATCTTTATTTTTTATCGGAGGTAGTAGTATGTTTTTCTTTGTTT
ACGGCAGTACACATGGAGGTAGTAGTATGTTTTTCTTTGTTTACGGCAGTACACATTGACAGGTTAAGCATGTACTTAAT
TTTCATATCAGAAGAACAAGATGTGCAATGAGCAGGTCCACTAGAGATTGTACATAGAGAAACAACAGCTTATATTGCAT
ATCATTAGAGAGATTCCTGTGTCAATCTGAGAAACTCACTGAAAGCCGCAGGTTATATTGCATATTCAGGCTATCGAGTC
AAGTTTCAGACTGATCATGAGTAGACCCCAAATTTCAGTTATGATGTTGATTTATGTGCTGCATCATAGTTCATATATTT
GGTTTCAAGCATTTACAGGGCAAATTATAAACATA
>chr4B_1
AATATCTCACTATCACTCGTCCTGAAATTTCCTTTGCTGTTCAACAAGCATGTCTCCATATACATGATCCATGACTTCCG
CGTTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGTTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCGCATACTCTGATGCAGACTGGGCTGTTTGTCCAGACACTCGACGATCCACATCGCGTTTTTGTGTT
TTTCT--GGGTA--ACAATTTGATTTCTTGGTCCTCAAAAAGACAGGTTACGGTTTCCCGCTCATCCGCTGAAGCTGAGT
ACCGTGTTGTGGCACATGCTGTCGCTGATACTATTTGGGTTCGTCAGTTGCTCTCAGAACTGCACCGACCTATCGAGCAG
GCTACTATTGTATATTGTGATAATATTTCAGCTATTTAAATGTCTGGAAATCCTGTTCAGCATCGTCGGACCAAACACAT
TGAGATTGATGTTCACTTTGTTCGAGAGAAGGTGGCTTTTGGACATGTTCGGGTGCTCCATGTTCCTACTACGGCT-CAA
TTTGCTGACATCTTCACCAAA-GGACTTTCTACTAAGCCATTTCAAGACATAAGTTCCAGTCTCAACGTCATCGAGCCTC
CCGTTGATACTGCG--------GG-GGGATGTTAGACTGTTCCTTAGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr4D_1
AATATCTCACTATCACTCGTCCTGAAATTTCCTTTGTTGTTCAACAAGCATGTCTCCATATGCATGATCCACGTCTTCCG
CATTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCGCATACTTTGATGCAGACTAGGCTGGTTGTCCAGACACTCGATGATGCACATCCAGTTTTTGTATT
TTTCT--GGGTA--ACAATTTGATTTCTTGGTCCTCAAAAAGACAGGTTACGGTCTCCCGCTCGTCCGCTGAAGCTGAGT
AT-GTGATGTGGCACATGTTGTCGCTGATACTATCTGGGTTCGTCAATTACTCTCAGAACTGCACCGACCGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTCAGCTGTTTACATGTCTGGAAATCATGTTCAGCATCACCGGACCAAACACAT
TAAGATTGATATTCACTTTGTTCAAGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTCCATGTTCCTAATATGGCT-CAA
TTTGCTGACATCTTCACCAAT-GGACTTGCTACTAAGCCATTTCAAGACATATGTTCCAGTCTCAACGTCATCAAGCCTC
ATGTTGATACTGC---------GG-GGGATGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr2D_1
AATATCTCACTGTCACTCGTCCTAAAATTTCCTTTGCTATTCAACAAGCATGTCTCCATATGCATGATCCACGGCTTCCG
CATTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCGCATACTCTGATGCAGACTGGGCTGGTTGTCCAAACACTTGACGATCCACATCTGGTTTTTGTGTT
TTTCT--CGATAACACAATTTGATTTCTTGGTCCTCAAAAAGACAGCTTACAGTCTCACGCTCATCCGCAGAAGCTGAGT
ACCGTGTTGTGGCACATGCTATCGCTGATACTATTTGGTTTCGTCAGTTCCTCTCAAAACTGCATCGACCGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTCAGCTGTTTACATGTCTGGAAATCCTATTCAGCATTGCCGGACCAAACATAT
TGAGATTGATATTCACTTTGTTCGAGAGAAGGTGGCTCTTGGACAAGTTTGGGTGCTCTATGTTCCTACTACGACT-CAA
TTTGCTGACATCTTCACCAAA-GGACTTGCTACTAAGCCATTTCAAGACATACGTTCCAGTCTCTACGTCATCGAGCCTC
CCGTTGATACTGCG--------GG-GGGATGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr7B_1
AATATCTCACTATCACTCGTCCTGAAATTTCATTTGCTGTTCAACAAGCATGTCTCCATATGCATGATCCACGGCTTCCA
CATTTTAATCATGTCAAA-CATGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCACATACTCTGATGCAGACTGGGCTGGTTGTCCAAACACTCGACGATCCACATCCGGTTTTTGTGTT
TTTCT--TGGTA--ACAATTTGATTTATTGTTCCTCAAAAAGACAGGTTACAGTCTCCCGCTCGTCCGCTGAAGCTGAGT
ACCATGTTGTGGCACATGCTGTCGTTGATACTATTTGGGTTCATCAGTTGCTCTCAGAACTACACCGAGCGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTCAGCTGTTTACATGTCTGGGAATCTTGTTTAGCATCGCCGAACCAAACACAT
TGAGATTGATATTCATTTTGTTTGAGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTCCATGTTCCCACTACGGCT-CAA
TT-GCTAACATCTTCACCAAA-GGACTTGCTACTAAGCCATTTCAAGACATACGTTCCAGTCTCAACATCATCGAGCCTC
CCGTTGATACTGCA--------GG-GGGATGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr2A_1
AATATCTCACTATCACTCGTCCTGAAATTCCCTTTGCTGTTCAACAAGCATGTCTTCATATGCATGATCCATGGCTTCCG
CATTTTAATCATGTCAAA-TGTGTTCTTACGTATTTAAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCGCATACTCTGATGCAGACTGGGCTGGTTGTCCAGATACTCAACGATCCACAACCGGTTTTTGTGTT
TTTCT--CAGTA--ACAATTTGATTTCTTGGTCCTCGAAAAGACAGGTTACGGTCTCCCGCTCGTCCGCTGAAGCTGAGT
ACCGTGCTGTGGCACATGCTGTCACTGATACTATTTTGGTTTGTCAGTTGCTCTCTGAACTGCATCGACCGATTGAGCAG
GCTACTATTGTATAATGTGATGATATTTTAGCTATTTACATGTATGGGAATCCTGTTCAGCATCGCCAAACCAAACACAT
TGAAATTGATATTCATTTTGTTCGAGAGAAGGTGGCTCTTGGACAAATTCGGGTGCTCCATGTTCCTACTACGGCT-CAA
TTTGCTTACATCTTCACCAAA-TGACTTGCTACTAAGCCATCTCAAGACATACGTTCCAGTCTCAACGTCATCGAGCCCC
CCGTTGATACTGCG--------GG-GGGATGTTGGACTATTTCTTGGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr7D_1
AATATCTCACTATCACTCGTCCTGAAATTTCATTTGATGTTCAACAAGCATGTCTCCATATGCATGATCCACAGCTTCCG
CATTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAAGTACTCTTGATCATGGTCTTGGCATCAATAAGTCCACTC
CTCATTCTCTCATCGCACACTCTGATGCAGACTGGGCTGGTTGTCCTGACACTCGACGATCCACATCTAGTTTTTGTGTT
TTTCT--AGGTA--ACAATTTGATTTCTTGGCCCTCAAAAATACAGGTTACGTTCTCCCGCTCGTCCGCTGAAGCTGAGT
ATCATACTTTGGCTCATGTCGTCACTGATACTATTTGGGTTCGTCAGTTGCTCTCAGAACTGCACCGACTGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTTAGCTGTTTACATGTCTGGAAATCCTGTTCAGCATCGCCGGACCAAACACAT
TGAGATTGATATTCACTTTGTTCGAGAGAAGGTGGCTCTTGGACATGTTCGGGTACTCCATGTTCCTACTACGGCT-CAA
TTTGCCGACATCTTCACCAAA-GGACTTGCTACTAAGCCATTTCAAGACATACATTCCAGTCTCAACGTCATCGAGCCTC
CCGTTGATACCGC---------GG-GGGATGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGGTT-----
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-----------------------------------
>chr3B_1
AATATCTCACTATCACTCGTCCTGAAATTTCCTTTGCTGT-CAACAAGCATGTTTCCATATGCATGATCCACGGCTTCCG
CATTATAATCATGTCAAA-CATGTTCTTTGGTATTCGAAAGGTACTCTTGATCATGGTCTACACACCAATAAGTCCACTC
CTCATTCTCTCATCGCATACTCTGATGCAGACTGGGCTGGTTGTCGAGACATTCGACGATCCACATCCATTTTTTGTGTT
TTTCT--GGGTA--ACAATTTGATTTCTTGGTCCTCAAAAAGACAAGTTACGGTCTCCCGCTCGTCCGCTCAAGCTGAGT
ACCGTGTTGTGGCACATGCTGTCGCTGATACTATTTGGGTTTGTCAGTTGCTCTCAGGACTGCACCGACCGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTCAGCTGTTTACATGTCTAGAAATCCTGTTCAGCATCACTAGACCAAACACAT
TGAGATTGATATTCACTTTGTTCGAGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTCCATGTTCCTACTACGGCT-CAA
TTTGCTGACATCTTCACCAAA-GGACCTGCTACTAAGCCATTTCAAGACATACGTTCCAGTATCAACGTCATCAAGCCTC
CCATTGATACTGCA--------GG-GG-ATGTAAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTTGGTT-----
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-----------------------------------
>chr6D_3
--TATCTCACTATCACTCGTCCTGAAATTTCCTTTGCTGTTCAACAAGCATGTCTCCATATGCATGATCCACGGCTTCCG
CATTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
CTCATTCTCTCACCACATACTCTGATGCAGACTGGGCTGGTTGTCCAGACACTCGACGATCCACATCCGGTTTTTGTGTT
TTTCT--GGGTA--ACAATTTGATTTCTTGGTCCTCAAAAAGACAGGTTACGGTCTCCCGCTCGTCCGCTGAAGCTGAGT
ACCGTGCTATGGCGCATGCTGTCGCTGATACTATTTGGGTTCGTCAGTTGCTCTTAGAACTGCACCGACCGATTGAGCAG
ACTACTATTGTATATTGTGATAATATTTCAGATGTTTACATGTCTGAAAATCCTGTTCAGCGTCGCCAGACCAAACACAT
TGAGATTTATATTCACTTTGTTCGAGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTCCATGTTCCTACTACGGCT-CAA
TTTGCTGACATCTTCACCA-A-GGACTTGCTACTAAGCCATTTCAAGATATACGTTCCAGTCTCAACGTCATCGAGCCCC
CCGTTGATACTGCG--------GG-GG-ATGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGTTT-----
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-----------------------------------
>chr3B_3
--TATCTTACCATCACTCGTCCTGAAATCTCTTTTGCTGTCCAACAAGCTTGTCTCTATATGCATGATCCTCGAATTCCT
CACTATAATCATATCAAA-CGCATCCTTCGGTATCTCAAAGGTACTCTGGATCATGGTCTCCACATAAACAATTCATCCC
CCACCTCTCTCACCGCGTATTCTGATGCAGACTGGGCTGGTTGTCCCGACACTCGACGATCTACATCCGGTTTCTGTGTT
TT--TCTCGGTG--ACAATTTGATTTCGTGGTCCTCGAAAAGGCAGGTAACCGTCTCCCGCTCGTCCGCTGAAGCTGAAT
ATCGTGCGGTTGCACATGCTGTGGCTGATACGATCTGGCTTCGTCAGTTGCTCTCCGAGTTGCATCGACCACTTCCACAT
GCTACCATTGTTTATTGTGATAACATATCAGCTGTCTACATGTCCGGGAATCCTGTTCAACATCGTCGGACTAAACATAT
TGAGATTGATATACACTTTGTTCGCGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTGCATGTTCCTTCAACGGCT-CAG
TTTGCTGATATATTTACCA-AAGGACTGCCATCTACATCTTTTTGTAATATTCGATCCAGTCTCAACGTTATCGAGCCTC
CCGTTGATACTGCG--------GGGGG-ATGTTAGACTATTACTTGGCTCTCAAGTTTCCTAATCCTAGTCG--------
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-----------------------------------
>chr3D_4
---ATCTCACTATCACTCGTCCTGAAATTTCCTTTGTTGTTCAACAAGCATGTCTCCATATGCATGATCCACGGCTTCCA
CATTATAATCATGTCAAA-CGTGTTCTTAGGTATTTGAAAGGTACTCTTGATCATGGTCTTCACATCAATAAGTCCACTC
GTCATTCTCTCACTGCATACTCTGATGCAGACTGGGCTGGTTGTCCAGACACTCGACGATCCACATCCGGTTTTTGTGTT
TT--T--GGGTA--ACAATTTGATTTCTTGGTCCTCAAAAAGATAGGTTATGGTCT-CCGCTCATCCGCTAAAGCTGAGT
ACCGTGCTGTGGCACATCCTGTCGCTGATACTATTTGGGTTCGTCAGTTGCTCTCAGAACTGCACCGACCGATTGAGCAG
GCTACTATTGTATATTGTGATAATATTTTAGCTGTTTACATGTCTGGAAATCCTGTTCAGCATCGCCGAACCAAACACAT
TGAGATTGATATTCACTTTGTCCGAGAGAAGGTGGCTCTTGGACAAGTTCGGGTGCTCAATGTTCCTACTATGGCT-CAA
TTTGCTGACATCTTCACCA-AAGGACTTGCTACTAAGACATTTCAAGACATACGTTCCAGTCTCAACGTCATCGAGCCTC
CCATTGATACTGCGCGCGGGAGGGGGG-GTGTTAGACTATTCCTTGGATCACAAGTTTCCTAGTCCAAGTCGATT-----
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>chr4A_840
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-----------------------------------------------------CTAACAGAGT-TCTTTTTACATGAACA
GAGTTTGTTTTTGCCCTCAAAAAA-TAGTGAAAAATAACAAGCCCTAATCTTGTGTGGGACCCATGTGCTAGAGACTGGA
GAGCAGGCTCAGTGGCCAGCCAAG---------AAAGCCATAGCCCGGAGCTT-AGATTAGCCATGTCTCTCG-------
--------CGCCTCCTCTGCTCCGCCTCCGCGCCCCCCGCCCCGACGCCGCCCTCTCCACCGCCGTCCCGTCCCGCCCTC
TCCCTGGATGCCTCGCCATCGGGCGGGGTCTCGGCTCCGGCCGCGCCTACTGCCTCTTCTCCGGCGCCGGCGCCGGCCGC
CGGAAGCAGGTGCGCGCAGCGTCCGTCTCTTTACCGAATCAATCATCTTCCGTGAGCAAGATCTGGCCGGCTTTTAGATT
TTTTTTTTCTGGGTTCAGATTTTGGACTGATGGCTGTATTCGGTGGCTGCGCGGAGACA----TAACCTGCTAAATGCTA
GCATCGACATTGTTCCTGTCTACGTAGTTAATAATCTTAATCCTGCATCGGGTTAGCAGTCGAGGCTGATGTTGGATTGC
TGGAACACATTCAGAATGATGGATTGATGAGTGATGTTTTTTAATCT------TGTAAGAACATGGCCAAACAGAATCAG
GAT--------TCCTGCAAGT-----------ACCTTGTTGGTTGAGATTTGATGGTTGCAGACAGCCT-GAATTTTCTC
AACTGTGCACTGTTAAGTAGTAGGAGTATTAAACTGCCCTCTTTGATTTGTGATAGGCATTGCTGGACTGCGTTCTCGAT
AAGTATATGTTTGGTG--TTTATTCCTGCGAGAATCCAGTGTTACTCGCA-------ATCTTCAATGGTTAAACAG-CCA
GAGCAACAAAAATATCG-----ACAAGCTGTGTCCTTTCCTTGCAGGAGGAAGCTAGGAGAGGGCTGGAGAGTGCCGTAG
ACCAGAACAAGACGGGGTTCGGGACATGGGGCGTGGAAACTGTTACAAGGCGGCTAAGAGACCGGCGTGGTGGCCCTGCT
CCTGC------TGTCGGTGGCGGTGGCAGGGGAAGGTCT---------GGAGGAGGAGGTGGTGGAGGTGGAGGTGGTTG
GTTCAGGTGGTTTAGCAGTGGAGGCTTCTGGGACGCTGCGAAGCAGACTGTTCTGACGATCCTTGGCATTATCGCGGCGG
TAAGCGGGGAATGTCCTGTGTTACTATGTCTAGTCCTTTCTGTAAAACATGCTTATATAGTAGTGCTAACACTTGCTCAA
CTTTGCATTGCAGGTCTTCCTCATCGCGAATTTCAACGTGCTTCTGGGGGCTGCCGTCTACCCGTTGCTGGTCGTGCTGC
GGCAAATAAGGCGCGCACTCACCTTTGCGGCTTATTGTGTTTCTCGGGCCATGTCGGCACCCGCTTCCAGGCCGAAGCCA
ACTCCTGTAGACAGCGCTGAAGTGGTGGCCGCAGCGCCTGTCAAAGAAAGAGCCAGAATGTCTGCAAGAGAAAGAGTTGT
TGCGAAATGGCGTTCGGACTGAATTAGAGGACATTTCAATGCCTTGTTTTTTT-----------GGCCGGTCAGATAGTT
TTCAAACCATGACTGTATAAGTTCTATTTCTTTTCTTCGTTGGCAG----------GAGCCTTTAAATTAGAAGTAGATG
GTGTTACAGCTATTTACAGGTGGCCATTTGAATGGTTCAGTTA-TAAGCACTATTTGTGTGGAAGATACCTTGGAAATAC
CACATTTAATTGCAG-------------------TCTGGACTTGATCGGCAATATATATGGTTATACAGGCAGCTTTCAA
CAGCAGCAGACTAACACTGCCCAGTCTGAACTTAGAGAGTGTTTTCAGTTC----TCAACTTTGATCCTGTTTTCAGTTC
ATGTTCCAAGCAACTTTCCTATGTGAATCTGAGTAGCTCACTG-------------------------------------
------------GAA-------------------------------------------------GATCATAAACGGACCC
CGGTTCAAGTTATGATGCTGATT--TGTGTGCTGCAGCATCGTCCATTATCTTTGATTTCAAGCAGTTTCATGTCAAATG
GAATACAT------------------------------------------------------------------------
-----------------------------TTTGCCTTTGTTTACGACAGTATACATTGATAGGTTAAGCATGTACTTAAT
TTTAGTATC---AGAACAAGATGTGCAATGAGCAGTT-CACTAGAGATTGTGCATAGAGAAACAACAGCTTATATTGCAT
ATTATTAGAGAGATTCCTGTGTCAATCTGAGAAACTCACTGAAAGCTGCAGGTTATATTGCAAATTCAGGCTATCGAGTC
AAGTTTCAGACTGATCATGAGTAGACCCCAAATTTCAGTTATGATGTTGATTTGTGTGCTGCATCATAGATCATATCTTT
GGTTTCAAGCATTTACAGCGCAAATTATAAACAT-
>chr4D_891
TTAGTG--------------------------------------------------------------------------
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-------------------------------AAAATAAGATGCCCTAATCTC-TGTGGGGCCCATGTGCT-----CTGGA
GAGCAGGCTCAGTGTCAGTAGCCAAGCCAGGAAAAAGCCATAGCCCGCAGCTTCAGATTAGCCATGTCCCTCGCGCCTCC
TCCGTGCCCGCCTCCTCTGCTCCGCCTCCGCGGCCCCCGCCGCGACGCCGCCCTCTCCGCCGCCGTCCCATCCCGCCCTC
TCTCCGGATGCCTCGCCACCGGGCGGGGCCCCGGCTCCGGCCGCCCCTACTGCCTTTTCTCCGGCGCCGGC------CGC
CGGAAGCAGGTGCGCGCACCGCCCGTCTCTTTACTAGACCAACCATCTTCCGCGAGCAAGATTTGGCTGGGTTTTAGAT-
---TTTCTCTGGGTCCAGACTTTGTACTGATGGT----TTTGGTGGCTGCAAGTGCAAGGTGTTAACCTGCTAAATGCTG
TTGAAACTGTAGCTCGAATTCAGT----------TCTTGATCCTGCATTGAGTTAACAGTTGGGGGTAAT--------GC
TGGAGCACATTCAGAGTGCTGGATTGCTGAGTGATGTTCTGTCTTTAT--------------------AAATCGAATTAG
GATGATACTATTCCTGCAAGTATCGTGTTTTGATCTTGTCGGTTCAGATTTGATGGTTGCAGACAGCCT-GAATTTTCTG
AACTGTGCACTGGTAAGTAGTAGGAGTATTAAACTGCCCTCTTTGATCTGTTATAGGCATTGCTGGACTATGTTCTCGGT
AAGTATATAAAACTGACGCTTGTTCCTGCGAGAATCCAGTGTTACTCGTATAGTCATATCTTCCATTGCTGACAGTCTGG
GTAAG---AAAATGTCAACATGACCAGTTGTGTGGTTTCCTTGCAGGAGGAAGCTAGGGGAGGGCTGGAGGGTGCCGTAG
ACCAGAACAAGACGGGGTTCGGGACATGGGGCGTGGAAACTGATACAAGGCAGCGAAGAGACCCGCGTGGTGGTCCGGGT
CCTGC------TGCCGGTGGCGGTGGCAGGGGAAGGCCTGCAGGAGGAGGAGGAGGAGGAGGTGGAGGTGGAGGTGGTTG
GTTCAGGTGGTTTAGCAGCGGAGGCTTCTGGGACGCGGCGAAGCAGACCGTTCTGACGATCCTCGGCATTATCACTGCGG
TAAGCGGGGAATGTCCTGTGTTACTATGTCTAGTCCTTTCTGTAAAACATACTTATATAGTAGTGCTAACACTTGCTCAA
CTTTGCATTGCAGGTCTTCCTCATCGCGAATTTCAACGTGCTTCTGGGGGCTGCCGTCTACCCGTTGCTGGTCGTGCTGC
GGCAAATACGGCGCGCACTCACCTTTGCGGCTTATTGTGTTTCTCGGGCCATGTCGGCGCCCGCTTCCAGGCCGAAGCCA
ACTCCTGTAGACAGCGCTGAAGTGGTGGCTGCAGCGCCTGTCAAAGAAAGAGCCAGAATGTCTGCAGCAGAAAGAGTTGT
TGCAAAATGGCGTTTGGACTGAATTATAGGACATTTCAATGCCTTGCGAGTTACCCTGTTTTCGGGCTGGTCAGATAGTT
TTGATACCATGACTGTACAAGTTCTGTTTCTTGTTTTCGAGTAAGCGGCAGGAGCAGAGACTTTATATTAGAAGTAGATG
GTGTTATAGCTATTTATAA--------TTGAATGGGTTAATTTTTAAGCACTATTTCTATGGAAGATACTTTGTAAATTC
CACATTTACT------TGTTGGTTGGATTTGGGCTCTGGACTTGATCGGCGATATATATGGTTATACAGGCAGCTTTCAA
CAGCAGCAGACTAAGTCTGCCAAGTATGAACTCTGAGAATGTTTTCAGTTCATGTTCAACTTTGGTCTTGTTTTCAGTTC
ATGTTCGAAGCAACTTTCCTATGTGAATCTGAGAAGCTCACTGAAACCTATGTTTCGTTGTGCATACTCAGCCTATTCGG
GCCGAGTTTCAGGAT-------------------------------------------------GATCATAAATAGACCT
CACTTTAAGTTATGATGCTGACTTGTGTGTGCTGCACCATCGTCCAT-ATCTTTGTTTTCAGGCAGTTTCATGGCAAATC
AAAAACTCCCTCCGATCCAAAATAAGTGTCGTCCATATCTTTATTTTTTATCAAAGGCAGTAGTATATTTTTCTTTGTTT
ACGA------------------------------------------CAGTACACATTGACAGGTTAAGCATGTACTTAAT
TTTTGTATCAGAAGAACAAGATGTGCAATGAGCAGTTGCACTAGAGATTGTGCAAAGAGAAACAACAGCTTATATTGCAT
ATTATTAGAGAGATTCCTGTGTCAATCTGAGAAACTCACTGAAAGCCGCAGGTTATATTGCATATTCAGGCTATCGAGTC
AAGTTTCAGACTGATCATGAGTAGACCCCAAATTTCAGTTATGATGTTGATTTATGTGCTGCATCATAGTTCATATATTT
GGTTTCAAGCATTTACAGCGCAAATTATAAACAT-
>SNPs
------------------S-------------------------------------------------------------
-------S----------S----------------------------------------------------S-----S--
S----------------------------------SS---------------------------------S---------
---S-----------------------------------------------------S----------------------
-----------------------------------------------------------------------S--------
---------S--------------------S-------------------------------------------------
------------------------S------S--------------------------------S-----------S---
--------------------------------------------------------S--S-SS-----------------
------------------------------------S--------------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-------S--------
--S--------------S------S----------S--------------------------------------------
-------------S------------------------------------------------------------------
---------------------------------S------------------------------------------S---
-------------S-----------------------S--------------------------SS--------------
-----------S-S--SS-----------------------------------------------S--------------
-----S-------------------S------S--S-SSS---S------------------------------------
S-------------S-------------------------------S-------SS-------------S-----S----
-------------------------S---S------------S----SSSSSS-----------S-S-----------S-
---------S------------S-S----------------------------------------S--SS--S-S-----
------S------------S---------S---------S---------S------------S---S----SS-------
------------S----S------------------S---------S------------------------S---SS-S-
---S-----------S-----S-----------S--------------S----------S---------------SSSS-
-------S----------------------------------------------S-------S-----------------
-----SSSSSS--S------S-----------------------------------------------S--S--------
--------------------------------------S-----------------------------------------
---------------------------S----------------------------------------------------
------------------------------------------------S-----------S-------------------
----S------------S----------------------------------------------------------S---
------------SS---S--------------------------------------------------------------
-------------------------------S---------------------SS-------SSS---------------
---------------------------------------------S---------SS-----------------------
---S-----S----------SS-S----------S--------------------------S---------S-----S--
------------S--S--S------------S------------------------------------------------
-------------S-S----------------------------------------------------------------
----------S---------S----------S------------------------------------------------
------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
----------------------S---------------------------------------------------------
---------S--------------------SS--------------------SS---S--------S-------------
---SSSSSSSSSSSSSSSSSSSSSSSSSS---SS-----------S----------------------------------
---SS------------------------------S-S-------------S----------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------S
>forward_721
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AGTCCAAGTCGGTTGTCGT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_1838
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACG
ACCAGAAAAAGACGGGG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>forward_974
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ACTGGA
GAGCAGGCTCAGTA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_2921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCTATTCGGGCCGAGTTTCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
