>input_sequence_54338
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-----------------------------------------------------------ATGCCGGCCACCGACTCCTCC
GCCTCGCCGGCGCACCACCACCACCA---CACCTCCTTCGGCCGCCACATCCTCTCGCTCCGCCACCGCGACCACGGCCA
GATCCACTCCGCCCCGCCCACGCCCGACCACCCCAACGCCACCG------CCAACCCCTCCCCCTCCCCGGCCGACCGCG
AAGTCGACGCCTTTCAGCGCCACACCGCGGACCTCCTCCTCGACCTGCTGCCCTGCTCCCCCGACGCCGCCCCCGCCGAC
GCCAAGAACGGCCCGCCGGAGATCCTCTCCATCGCCTGGACCCAGCACCTGCTCGACTCCTTCCTCATCTGCCTCGAGGA
GTTCCGCTCCGCGCTCCTCGCCGGCGGCCCCGGGGCCCTCGCGCGCCCCCCGCTCGACCGCCTCGTCGCCGACTTCTTCG
ACCGCGCCGTCAAGGCGCTCGACCTCTGCAACGCGCTCCGCGACGGCCTCGACCTGCTCCGCCAGTGGCGCAAGCACCTC
GCCATCGCCGCCGCTGCGCTCGCCCCGCAGGGCGCCGCGTCCAACCCCGCCGCGCCGCTCGGGGAGGGCCAGATCCGCCG
CGCCCGCAAGGCGCTCACCGACCTCACCATCCTCATGCTCGACGACAAGGACGCCGGCGGCGGGGGGCAGCGGAACCGCT
CCTTCGGCCGGACGGGTAACGCCGGCAAGGACGCCGCCGGGCAGCAGAGCCGGGGGCACCACCGCCGCAGCAGCAGCGGC
TCCGGCTCCGGCTCCGGCGGCTCCCACTTCAGGTCGCTGTCCTGGAGCGTGTCCCGCACCTGGTCCGCGTCCCGCCAGCT
GCAGGCCATCGGGGGCAACCTGCCCGTGCCCCGCGCCAGCGACGTCGCCGCCACGGGCGGCCTCGCCTCCGCCGTGTACA
CCATGGGCGCCGTGCTCTTCGTCACCGCATGGGCGCTCGTCGCCGCCATCCCCTGCCAGGACCGCGGCCTCCAGGCGCAC
TTCGCCGTGCCCAGGAGCTTTCCCTGGGCCGGCCCGGTCACCACGCTCTACGAGCGCGTCCTCGAGGAGTCCAAGAAGAA
GGACCGCAAGCACTCGTGCGGGCTGCTCAAGGAGATACACCTCATCGAGCGGTGGTCGCGGCAGCTCATGGAGATCACCG
ACGCCGCGCAGTTCCCCCTGGACAAGGAGAAGGACGCCGAGGTGCGGGAGGCCGCGCAGGAGCTGGTGCAGGTGTGCGAG
GCACTCAAGGACGGGCTCGACCCGCTCGAGCGGCAGGTGCGCGAGATGTTCCACCGCATCGTGCGCACCAGGACGGAGAT
CCTCGACTGCTTGAATAGGCCCAACACCGCCGAGTAG-------------------------------------------
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>chr2D_1_TraesCS2D01G585000
AGCCTAGTGCAAGCTAAAATTTAAACAGGGTTAAAAACCATTAAAATTTATTGTATTTCGAAACTCAAAATCCGAAAGAA
GTTCTGATTTTTGTTTTTTTGCATATTTTGGTGACATCCGGAAATTTCTCCTTTTCCGAAATTAAAAACCTTACGGATGC
TTAGATTTGCTCCTTTTCATCTCTACTTACTTTGTGTTTGTGTATTAGCTTTGTTTTCAAGTAAAACTTTTCAAAATTCG
ATTAACTTTATAAAAATCAATATGGGCATTTACAACAATGGAATATTTGTTGTGAAAATACACTAGTATTAAAAATGATG
AGTGCAATGGTCTTGTAGATGTTCATGAATTGTTTATAATTAAAATTTATAAAGTTTGATTTAAGACAAAGTTATTATGC
AGAGTAGATAAAATCAAAACTTGCACATACTCGAATGCTGGGTCATGTACGCGAGGATAATAATGTAGAGGTGTGACTAG
CTCTCATCCAGTTGAGAAATGACTAGTGTCATCCAACTCCTACTACACCGATGGATTTTACGCGGATATTCGCAGGAACT
ATTTTGCTTAATCAAATACTAGTCCAGATGAGAATTAACAAGTCCGATAATTTATCTCTGACTTATGTGGTCCAATTATG
CATACCTCTGAACATAAATAAATGAAATAAATAGAGATAAGATAATTTTGTTTTTTTATTGTTTTTTGTTTACCCACACC
AGC----------AGCAGCCGGATAGGATGGGAGCAGACGCCAGCAGCGCGACAGTCGGTCAGGCGGCTGAGCCAAGGTG
GAGACAGACAGACAAACCCCACGCCTTTTTCACCCCCACCCCTCGCCTCCCCCGAAATCCCATTCCAGCCCCCG-GATTC
CCTGCTTCCTTT-CCCATTCCGTTCACCTTCCTTCCTCTCATAGTTGG---TGG----CGGAAGCAGACGAACCATTCCG
GATTCCTCTCGCCACCGCCGCCGGAGACCGGTAGTCCAACCCTAGCCCGCCCGCCCGCAATGCCGGCCACCGACTCCTCC
GCCTCGCCGGCGCACCACCACCACCA---CACCTCCTTCGGCCGCCACATCCTCTCGCTCCGCCACCGCGACCACGGCCA
GATCCACTCCGCCCCGCCCACGCCCGACCACCCCAACGCCACCG------CCAACCCCTCCCCCTCCCCGGCCGACCGCG
AAGTCGACGCCTTTCAGCGCCACACCGCGGACCTCCTCCTCGACCTGCTGCCCTGCTCCCCCGACGCCGCCCCCGCCGAC
GCCAAGAACGGCCCGCCGGAGATCCTCTCCATCGCCTGGACCCAGCACCTGCTCGACTCCTTCCTCATCTGCCTCGAGGA
GTTCCGCTCCGCGCTCCTCGCCGGCGGCCCCGGGGCCCTCGCGCGCCCCCCGCTCGACCGCCTCGTCGCCGACTTCTTCG
ACCGCGCCGTCAAGGCGCTCGACCTCTGCAACGCGCTCCGCGACGGCCTCGACCTGCTCCGCCAGTGGCGCAAGCACCTC
GCCATCGCCGCCGCTGCGCTCGCCCCGCAGGGCGCCGCGTCCAACCCCGCCGCGCCGCTCGGGGAGGGCCAGATCCGCCG
CGCCCGCAAGGCGCTCACCGACCTCACCATCCTCATGCTCGACGACAAGGACGCCGGCGGCGGGGGGCAGCGGAACCGCT
CCTTCGGCCGGACGGGTAACGCCGGCAAGGACGCCGCCGGGCAGCAGAGCCGGGGGCACCACCGCCGCAGCAGCAGCGGC
TCCGGCTCCGGCTCCGGCGGCTCCCACTTCAGGTCGCTGTCCTGGAGCGTGTCCCGCACCTGGTCCGCGTCCCGCCAGCT
GCAGGCCATCGGGGGCAACCTGCCCGTGCCCCGCGCCAGCGACGTCGCCGCCACGGGCGGCCTCGCCTCCGCCGTGTACA
CCATGGGCGCCGTGCTCTTCGTCACCGCATGGGCGCTCGTCGCCGCCATCCCCTGCCAGGACCGCGGCCTCCAGGCGCAC
TTCGCCGTGCCCAGGAGCTTTCCCTGGGCCGGCCCGGTCACCACGCTCTACGAGCGCGTCCTCGAGGAGTCCAAGAAGAA
GGACCGCAAGCACTCGTGCGGGCTGCTCAAGGAGATACACCTCATCGAGCGGTGGTCGCGGCAGCTCATGGAGATCACCG
ACGCCGCGCAGTTCCCCCTGGACAAGGAGAAGGACGCCGAGGTGCGGGAGGCCGCGCAGGAGCTGGTGCAGGTGTGCGAG
GCACTCAAGGACGGGCTCGACCCGCTCGAGCGGCAGGTGCGCGAGATGTTCCACCGCATCGTGCGCACCAGGACGGAGAT
CCTCGACTGCTTGAATAGGCCCAACACCGCCGAGTAGGCGAACCGGCATGGATCATCGTGGCAATGCTGTTTGGTTGAAC
ATTGTGTGATATA-TCAAAATGCAGGTGGTATGCT-----GATG---ATCGATCGCCGGTTGAAATCGAGGTAGCTTTCC
TCTGCATAATTTATACATGTGTCTTGATGCATAGAGGCCGGCGTGGCCTTATGATAAAATC-GAGTCGTTTAGTTGTATT
TGATTTATTCTTTGTTTGTAGCAGCTTGTGAATCCTTCTCTTATCTGGGC-------AGTGCTTGGTACTGACGGTCTAA
CACTATTGTTTTATTCTTGAAATCTGGTTTGGCTTGGTTTGGTTTGGTTTGGTAATGCCGCCCAACACTTAGGTGCTTGG
TTCATGTTCATGATTGATTAGGGCTGTACAGGGCTTGTTGGCGTGATAGTTTCGACAGTGAGTGATTTAT---GTGATCC
AGGTCCAGTTTAGAGTTGGATGCATGCTAACATCCTCTGTCGATGGTCATGG----TGTCAATGAGATGTTTGGGCAACC
TTGATTGTTGGTCATGTTATCCTAGTTTGTTGCACCTAGCATGCATTTGCCACTTGGGCACAGATTATCAATGGAGAATG
GGGATAGCATTGCTCTGTTGTCTGCAGTAGCGGGTGAAATTTTGGATATCTGGAAATGCATTTTGATCTGATGGCCAGAT
AGCA-------------TTGCTAGTACTGTATGAACCAGTTATGTTAAGATTACCTCTTGTTTTATTCTTCAAATCTGGT
TTGGCTTGGTAATGCTGCCAAGCACTTGGGTGCAAGTGCCTGGATGGTGTTGGTGATTTGGC-----CTGTACAGTGCTT
GTTGGTACGACGGTTGCGGCTGCGCG--TAATTTATGTGATCCAGGTTCAGTTTAGAGTAGGGTGCATGCTAAGGTGCTC
TTTTAATGGTCATGATTTTCATGAGCTGTTTGGGCAACCTTACTTGGTCCTGCACTCCTGCATTTGTAGTTGGC------
----------------------------------------------------ATTGTTCTGTTATCTGCAGTACCGTGTG
AAGTTTTTGATCTGTAAAT-------------------------------------------------------------
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>chr2A_676
GATGAAGATATTTTGATTTAAATTTAT-----------------------------------------------------
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-------------------------------------------------------------TTTTTTGTTTACCCACACC
AGCAGCAGCCAAGAGCCGCCGGATAGGGTCAGAGCAGACGCCAGCAGCGCGACAGTGCCG---------------AGGTG
GAGACAGACAGACAAACCCGACGCCTTTTTCACCCCCACCCCTCGCCTCCCCCGAAATCCCATTCCAGCCCCCCTGATTC
CCTCCTCCCTTT-CCCATTCCGTTCACCTTCCTTCCTCTCATAGTTGGTGGTGG----CGCAAGCAGACGAACCATTCCG
GATTG--CTCGCCGCCGCCGCTGCAGACCGGTAGTCCAACCCTAGCGCGCTCGCCCGCAATGCCGGCCACCGACTCCTCC
GCCTCGCCGGCGCACCACCACCACCA---CACCTCCTTCGGCCGCCACATCCTCTCGCTCCGCCACCGCGAGCACGGCCA
GATCCACTCCGCCCCGCCCACGCCCGACCACGCCAA---CACCG------CCAACCCCTCCTCCTCCCCCGCCGACCGCG
AAGTCGACGCCTTTCAGCGCCACGCCGCCGAGCTGCTTCTCGACCTGCTCCCCTGCTCCCCCGACGCCGCCCCCGCCGAC
GCCAAGAACGCCCCGCCGGAGATCCTGTCGATAGCGTGGACCCAGCACCTGCTCGACTCCTTCCTCATCTGCCTCGAGGA
GTTCCGCTCCGCGCTCCTCGGCGGCGGCCCCGGGGCCCTCGCGCGCCCCCCGCTCGACCGCCTCGTCGCCGACTTCTTCG
ACCGCGCCGTCAAGGCGCTCGACCTCTGCAACGCGCTCCGCGACGGCCTCGACCTGCTCCGCCAGTGGCGCAAGCACCTC
GCCATCGCCGCCGCCGCGCTCGCCCCGCAGGGCGCCGCGTCCGACCCCGCCGCGCCGCTCGGGGAGGGCCAGATCCGCCG
CGCCCGCAAGGCGCTCACCGACCTCACCATCCTCATGCTCGACGACAAGGACGCCGGCGGCGGGGGGCAGCGGAACCGCT
CCTTCGGCCGGACGGGTAACGGCGGCAAGGACGCCGCCGGGGGCCAGAGCCGGGGGCACCACCGCCGCAGCAGCAGCGGC
TCCGGCTCCGGCTCCGGCGGCTCCCACTTCAGGTCGCTGTCCTGGAGCGTGTCCCGCACCTGGTCCGCGTCCCGCCAGCT
GCAGGCCATCGGGGGCAACCTGCCGGTGCCCCGCGCCAACGACGTCGCCGCCACGGGCGGCCTCGCCTCCGCCGTGTACA
CCATGGGCTCCGTGCTCTTCGTCACCGCCTGGGCGCTCGTCGCCGCCATCCCCTGCCAGGACCGCGGCCTCCAGGCGCAC
TTCGCCGTGCCCAGGAGCTTCCCCTGGGCCGGCCCGGTCACCACGCTCTACGAGCGCGTCCTCGAGGAGTCCAAGAAGAA
GGACCGCAAGCACTCGTGCGGGCTGCTCAAGGAGATACACCTCATCGAGCGTTGGTCGCGGCAGCTCATGGAGATCACCG
ACGCCGCACAATTCCCCCTGGACAAGGAGAAGGACGCCGAGGTGCGGGAGGCCGCGCAGGAGCTGGTGCAGGTGTGCGAG
GCACTCAAGGAAGGGCTCGACCCGCTCGAGCGGCAGGTGCGCGAGATGTTCCACCGCATCGTGCGCACCAGGACGGAGAT
CCTCGACTGCTTGAGTAGGCCCAACACCGCCGAGTAGGCGAGCCGGCATGGATCATCATGGCAATGCTGTTTGGTTGAAC
ATTGTGTGATATACTTAAAATGCAGGTGGTATGCT-----GACGGTCATCGTTCGCCGGTTGAAATCGAGGTAGCTTTCC
TCTGCATAAGTTATACATGTTTCTTGATGCATAGAGGCCGGCGTGGCCTTATGATAAAATC-GAGTCGTTTAGTTGTATT
TGATTTATTCTTTGTTTGTAGCAGCTTGTGAATCCTTCTCGTATCTGGGC-------AGTGCTTGGTACTGACGGTCTAA
CACTATTGTTTTATTCTTGAAATCTGGTTTGGCTTGGTTTGGTTTGGTTTGGTAATGCCGCCCAACACTTAGGTGCTTGG
TTCATGTTCATGATTGATTAGGGT-----AGGGCTTGTTGGCGCGATAGTTTCGACTTTGAGTGATCTAT---GCGATCC
AGGTCCAGTTTAGAGTTGGACGCATGCTAACATCCTCTGTCGATGGTCATGG----TGTCAATGATATGTTTGGGCAACC
TTGATTGTTGGTCATGTATCCATAGTTTGTTGCACCTAGCATGCATTTGCCACTTAGACACAGATTATGAGTGGAGAATG
GAGATAGCATTGCTCTGTTGTGTGCAGTACCGAGTGAAATTTTGGATATCTGTAAATGCATTTTGATCTGATCGCCAGAT
AGCA-------------TTGCTAGTACTGTATGAACCAGTTATGTTAAGATTACCTCTTGTTTTATTCTTCAAATCTGGG
TTGGCTTGGTAAT---ACCAAGCACTTGGGTGCAAGTGCTTGGATGCTGTTGGTGATTTGATTTGATCTGTACAGGGCTT
GTTGGTACCAAGTTTGCGGCTGCGCGCTTAATTTATGTGATCTAGGTTCAGTTTAGAGTTGGGTGCATGCTAAGGTGCTC
TGTTAATGGTCATGATTTCCATGAGCTGTTTGGGCAACCTTATTTGGTCCTGCACTCCTGCATTTGTAGTCGGCTGTGTA
CCTAGCATGCATTTCCTT-----------------------------------TTGTTCTGTTCTCTGCAGTACCGTGTG
AAGTTTTTGATCTGTAAAT-------------------------------------------------------------
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>chr2B_724
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-------------AGCCGCCGGATAGGATGGGAGCAGACGCCAGCAGACGACAGTCAGGCG----------GCCAAGGTG
GAGACAGACAGACAAACCCGACGCCTTTTTCACCCCCGTCCCCCGCCTCCCGCAAAATCCCATTCCAGCCCCCG-GATTC
CCTCCTTCCGTTTCCCATTCCGCTCACCTTCCTTTCCCTCATAGCTGCTGGTGGTTCCCGGAAGCGGACGACCCATTCCG
GATTCCCCTCGCCGCCGCC------GACCGGTAGTCCAACCCTGGCGCGCTCGCCCGCAATGCCGGCCACCGACTCCTCC
GCCTCGCCGGCGCACCACCACCACCACCACACCTCCTTCGGCCGCCACATCCTCTCGCTCCGCCACCGCGACCACGGCCA
GATCCACTCCGCCCCGCCCACGCCAGACCACCCCCACGCCGCCGCCAACCCCAACCCCTCCCCCTCCCCCGCCGACCGCG
AAGTCGACGCCTTTCAGCGCCACGCCGCCGAGCTGCTCCTCGACCTGCTCCCCTGCTCCCCCGACGCCGCCCCCGCCGAC
GCCAAGAACGCGCCGCCGGAGATCCTCTCCATCGCCTGGACCCAGCACCTGCTCGACTCCTTCCTCATCTGCCTCGAGGA
GTTCCGCTCCGCGCTCCTCGGCGGCGGCCCCGGGGCCCTCGCCAGGCCCCCGCTCGACCGCCTCGTCGCCGACTTCTTCG
ACCGCGCCGTCAAGGCGCTCGACCTCTGCAACGCGCTCCGCGACGGCCTCGACCTGCTCCGCCAGTGGCGCAAGCACCTC
GCCATCGCCGCCGCCGCGCTCGCCCCCCAGGGCGCCGCCTCCGACCCCGCCGCGCCGCTCGGGGAGGGCCAGATCCGCCG
CGCCCGCAAGGCGCTCACCGACCTCACCATCCTCATGCTCGACGACAAGGACGCCGGCGGCGGGGGGCAGCGCAACCGCT
CCTTCGGCCGGGCGGGCAACGCCGGCAAGGACGCCGCCGGGCAGCAGAGCCGGGGGCACCACCGCCGCAGCAGCAGCGGC
TCCGGCTCCGGCTCCGGCGGCTCCCACTTCAGGTCGCTGTCCTGGAGCGTGTCCCGCACCTGGTCCGCGTCCCGCCAGCT
GCAGGCCATCGGGGGCAACCTGCCGGTGCCCCGCGCCAGCGACGTCGCCGCCACGGGCGGCCTCGCCTCCGCCGTGTACA
CCATGGGCGCCGTGCTCTTCGTGACCGCCTGGGCGCTCGTCGCCGCCATCCCCTGCCAGGACCGCGGCCTCCAGGCGCAC
TTCGCCGTGCCCAGGAGCTTCCACTGGGCCGCCCCGGTCACCACGCTCTACGAGCGCGTCCTCGAGGAGTCCAAGAAGAA
GGACCGCAAGCACTCGTGCGGGCTGCTCAAGGAGATACACCTCATCGAGCGGTGGTCGCGGCAGCTCATGGAGATCACCG
ACGCCGCGCAGTTCCCCCTGGACGAGGAGAAGGACGCCGAGGTGCGGGTGGCCGCGCAGGAGCTGGTGCAGGTGTGCGAG
ACACTCAAGGACGGGCTCGACCCGCTCGAGCGGCAGGTGCGCGAGATGTTCCACCGCATCGTGCGCACCAGGACGGAGAT
CCTCGACTGCTTGAGTAGGCCCAACACCGCCGAGTAGGCGCACCGGCATGGATCATCGTGGCAATGCTGTTTGGTTGAAC
ATTGTGTGATATACTCAAAATGCAGGTGGTATGCTCCACCGATG---ATTGATCGCCGGTTGAAATCGAGGTAGCTCTCC
TCTGCATAAGTTATACATGTGTCTTGTTGCATAGAGGCCGGCGTGGCCTTATGATAAAATCGGAGTCGTTTAGTTGTATT
TGATTTATTCTTTGTTTGTAGCAGCTTGTGAATCCTTCTCTTATCTGGGC-------AGTGCTTGGTACTGACGGTCTAA
CACTATTGTTTTATTCTTGAAATCTGGCTTGGTTTGGTTTGGTTTGGTTTGGTAATGCCGCCCAACACTTAGGTGCTTGG
TTCATGT-CATGATTGATTAGGGCTGTACAGGGCTTGTTGCCGCGATAGTTTCGACTGTGAGTGATTTAT---GCGATCC
AGGTCCAGTTTAGAGTTGGATGCATGCTAACGTCCTCTGTCGATGGTCATGG----TGTCGATGAGATGTTTGGGCAACT
TTGATTGTTGGTCATGTTATCCTAGTTTGTTGCACCTAGCATGCATTTGCCACTTAGACACAGATTATCAGTGGAGAATG
GAGATAGCATTGCTCTGTTGTCT--------GAGTGAAATTTTGGATATCTGTAAATGCATTTTGATCTGATGGCCAGAT
AGCA-------------TTGGTAGTACTGTATGTT---------------------------------------------
------------------------------------------------------------------------CAGGGCTT
GTTGGTACGACGGTTGCAGATGCGCG--TAATTTATGTGATCCAGGTTCAGTTTAGAGTTGGGTGCATGCTAAGGGGCTC
TGTTAATGGTCGTGATTTCCATGAGCTGTTTGGGCAACCTTATTTGGTCCTGCACTCCTGCATTTGTAGTTGGCTGTGTA
CCCAGCATGCATTTCCTACGTTCTTTGGGCGCACATTATCAGTGGGGGTAGCATTGTTCTGTTCTCT--------GTGTG
AAGTTTTTGATCTGTAAATGCATTTTGCTGTGGCCGCCGCCCAGACAACCATGCTGTGCTTGGTATGAAACAGTCATGTG
AAGATTGTCTATTTTGTTGGACAAAAATTATGCAGATGCTTTGTGTCCGATGAAAGCCAGCCCGACCTTTGTATGATGCT
CATCTAAAACATACTATAACAAACGCAATGGATGGTGTATATGCACCGTCGTGTCAATATCGAACCAAATTTATCGTGCA
CATAGCACAACTCCTGAATTCGAGATTGGTCTGTTGGTGATAGTAGATCAGGTGTAAATGTTGTGACTGATGTTCCTCTC
ATTTGATTCATGTCTCTGGATTCATAGAGCGTCGACGGTCACTTAGGGAAATGCATATATGGATGCAGACTTCTTTTGCA
ATTGGGGACCGACGGCTCAGTTCAGAGGCTCTGCTTGTAATGTTTGGATGAAACCCAAGCTGGTTAAGATTGGTTAGGCT
TTTTCCTTGTGGGTGTTGCTGGTAGGCACCACCTAGTGCAACAACGTTTTCCTTGCTGCCGAGCAAAATGATGCTGCATG
AATGAGAGGCCGCTTGTTGCGGAGCCATTTCTTACTGGGCAGGAGCCAGGAATCTGCTTCCTCGTGTCCGCCCGTCCACA
TCTGCAACTGCTAACTTGCACCGCCCAACCACAGTTTCTTTCTGCGTTTCTTCTTGGTCAGAAGAGTGAGGTGAGCAGCA
GCACGTTTGGTTGCAAGGAAGACGCCCATTGTCAACTCAACTACTCCTTTTAAAAATGTCATGGTCTAAAAAATACAAAT
AAAATAAAAATGCCATGCTATCTGCAATAAAACTACCCTGTGGTTAATATAATTGCAATGGTCTAAAAATGATTTAAAAA
ATCCATGCTATCCTACGATGTAACCTACAAAGTGATCCACTAAAAAAAACTTACAACAAAAAAGAAATGTCATGGTATGC
CGACATGACCATTTAATAAGATTTGACCATCAAATTGTAAGAACAATTATTGTGTTGGGCATGTATTCTCACCTACAACA
TCATGTCGATACATTAAAAAAAAATCTGAATTTCAACTAGCTTTGTTGTGGTGCAATAAAAAAACTCCACCGCCACCCAA
CTCGACCGCCACTCATGCTCATCGACGATCTCAATGGACACAATGGCGGCGTCACACATCTCCTCCCGCACCTCATCGGT
GACGTCTGGACTCGTCCCTGCCGCCGCCCGGCTCATCCCGCTGGCGCATGTGGAAAATGAGAGGATACGGTGAGGGGAAG
AGGTGCGACAGGGAGTAGATGCATTTGCGTTCGCCACAGGCTCTCTCCTAGCGAATGAGACGGCCTTTTAGAATTTAACA
TTAGGTTTTTTGAAGATAGTAAGACTTGCTAACTCTAGGGCAAGTTCGAGTAAAAACATTTGTACTAAACTTTTATACTT
ATTTATAGCTCATTTATTATAAAACATAAATTTAGAACTGTAATAAAGCATATCATCTAGGGTTCCTCGGATAATGCGAT
ATCTCACACCGGGAAAATCCTTAACCCTGCTCCTGTTACTAATACTACAAAATGTTATTGTAAATTATGGCCAACGATAT
CTCACACCGGGAAAATCCTTAACCCTGCTCCTGTTACTAATACTACAAAATGTTATTGTAAATTATGGCCAATACCAGGT
ATATAAGTAGTGATTTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTACGTAGGGTAGAGTTGGGTTTTTTGGGGTTG
ATAGTGGAAAATTCGACAAATAAGTCACCCTTACTATCCCTTTACATAACCGTACACAAGATTTTCACCTCATACGGCTC
CTCGGTCAATTCTTTCGAAGGGATCATTTTCCTCCTTCAAGAGTCTTCGCCTTTCTTCCACTCCATCTCGAAGAATAACT
AATACCAATTGAATCATGTTTTCATGTTCTATTTGAACACTTTCCATTTATGATATGGTTAAAAGATAATATTTTTCTTT
TACCAAACATATGCAGATTAAATCACGTCTTATAATAATAAAAAATATTTCTCTTGTCGATGATATCAATGGATGCAATC
GCGGCGTCACGCAACTACTCCCCACTTTGTCAATGACGCCTGTGTTAAACACAATATCTTGTGTAGCGTGACAGCCTAGG
AGAGGTTGCAATCTTGTGCCGCATAGTTAGGTAGTTAGATGGATAATTCAACTAGGTAACCATAAACACTTATCTCTATC
TTTCTTCTCCCTCAAGTTGTAATCTCCGAACTGTATGCGGTATCCAGGGAGAAGATGCGTTTGCGTTCGCCATTGATTCC
CTCCCAGCGAATGCGACTGCCTTTTAGAATCTAACACTAGTTTTTTTTCGAAAATATTAAGACTTGTCAATTTTAGGGCA
ATTTCAAGTATAAAACATTTGTACTAAACTTTTATACTTATTTATAGCTCATTTATTACAAAACATAAATTTAGAACTCT
AATAAACCACATTTTAAGGTGTGCACATCTGTACTCAACGAAACTTAAGCAATTGTTGCAAGAGAAGTCTATTTTTTTGC
GATGTTGCCCCTTAAAATCTTTAAACCAAATTATGAGTAAATGAAAAACAACAAAAAAAACACTATATATTAACTTGCGA
CACTTGCATGGATTAAAGTGTATATATATCCCCTCTCTCTCTGTGTTGTCGACAAAATATCTTGATAATAGTTTCTAGTC
TATAATTGTATATAAGCATCTAAATATTTCTAGAGTATATATGGTCTGTACAGGGAGTTTTTCTTCTTCTTTATAGTAGG
TTCTGTTCAATAGTCAATTGTATTTTACATTGTATAGTTGGTTCAATAATCAAGTAAAAATGTGCATGTTGTAAGATTTT
GGATACCTGCAAGTGCATTTTGATCTGATCGCCAGACAGTCATGCTAGTAGTGTATGAAACAGTTATGTTAAGATTGCCT
CTTGTTTATTCTTCAAATCTGGTTTGGCTTGGTAATGC
>chr2A_1276
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-----------------------CCTCTCCATCGCCTGGACGTGCCGCCTGATCGACACCTTCCTCATCTGCCTCGAGGA
GTTCCGCTACATGCTCCTCGGATTTC---------CCCTCGGGCGGCCCCCGTACGACCTCCTCGTTGCCGACTTCCTTT
ACCGCGCCATCATGGCGCTTGATCTCTGCAACGCGCTGCGCGAGGGCGTGGACCTGCTCCGCCAGTGGCGCAAGCACCTC
GCCATTGCCGCTGCAGCGCTCGCTTCCACGCCGGGCGCC---------------CCGCTTGGGGAGGGCCAGATCCGCCG
CGCCCGCAAGGCGCTCACCGACCTCACCATCCGTATGATCCAAGACAAGGACGCCAA---CGGCGGACAGCGAAGTCACT
CCTTCGGCCGGGCCAGCAACGAT---AAGGACGGCGGGAGGCAGCAGAAGGG------CCACCACCGCAGAAGCAGCGGC
TCTCGCTTCAGCTCC---------------------CTCTCGTGGAGCGTGTCCCGGTCCTGGTCCGCCTCGCGCCAGCT
ACGGGCCATCGGGGGCAACCTGCCGGTACCCTCCGCGCAGGAT------GCCACGGGCGGCCTCGCCTCCGCCATGAGCA
CCATTGGTGTCGTGCTCTTCTTCACAACCTGCTTGCTCGTCGCTGCCATCCCCTGCCAGGACCGCGGTGTCCAGGCGCAC
TCCG----------------------------------------------------------------------------
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>chr2D_2360
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-------------------------------------------------------------------TGTTTGGTTGATC
ATTGTGTGAAATACTCAAAATGCAGGTGGTATGCT-----GATG---ATCCATCGCCCATTGAAATCGAGGTAGCCTTCC
TCTCCATAAGTTATACATGTGTCTTCATGCATAGAGGCCGGCGTGGCCTTATGATAAAATCG-AGTCGTTTAGTTGTATT
TGATTTATTCTTTATTTGTAGCAGCTTGTGAATACTTCTCTTACCACCTGGGCAGTGAGTGCTTCGTGCTGACGGTCTAA
CACTATTGGTTTATTCTTGAAATCTGGTTTGGTTTGGTAATGGCAGG------------------CACTTTGGTGCTTGG
TTCATGTTCATGATTGATTAGGCTGTAGA--GGCTTGTTGGCGAGATGGTTCCGACTTTGAGTGATTTATTATGTGATCC
AGGCCCAGTTTAGAGTTGAGTGCATGCTAACGTCCTCTGTCGATGCTCATGTTTGTTGTCAGTGAGATGTTTGTGCAACC
GTGATGATGGATCCATG-----------GTTGTACATAGCATGCATTTGGTACTTAGACACAGATTATCAGTAGAGACA-
-----AGCGTTGCTCTGTTCTCTGCAGTACTGAG----------------------TGCACTTTGATCTGATCGCCGCGA
GACAGCCATGTTGTACGTTGCTAGTTCTGTATGAAACAGTTATGTTAGGATTACCTCTTGTTTTATTCTTCAAATCTGGG
TTGGTTTGGTAAT---GCCAAGCACTTGGGTGC------TTGGATGGTGTTTGTTATTTGGTCTATACTGTACAGGGCTT
GTTGGTATGATGATTGCAATTGCGTG--TAATTTATGTGATCCAGGTCCAGTTTAGAG-------CATGGTAAGGTGCTC
TGTTAATGGTCATG----TCATGAGCTGTTTGGGCAACCTTACTTGGTCCTGCACTCCTGCATT----------------
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>SNPs
SSSSS--SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
----------------S---------------------------------------S--SSSSSSSSSSSS---------
-------------------S------------------------------------------------------------
---S----------------------------------------------------------------------------
------S------S-------S-S----------------------S---S-----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------S----S--S--S--------------S------------------------------
----------S---------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------S------------S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-S------------S---------
-S---------------------------S--S-------------------S---------------------------
-------------------------------------------------------------------------------S
-------------SSS-----------------------S---------------------S-------------S----
-----------------------------------------------------------S--------------------
-S------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
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--------------------------------------
>forward_546
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACCGATGGATTTTACGCGGA--------------
--------------------------------------------------------------------------------
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--------------------------------------
>reverse_2490
--------------------------------------------------------------------------------
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---------TTTATACATGTGTCTTGATGCATAGAG--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------
