>input_sequence_54325
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---------------------------------------------------------------------------ATGGA
CCGCAGTAACCTACCTCCTGGAAACACGACGCAAGGAGCTCCTTATGGTAGTTTGAATGTACATGGTAACTCCATGCAAA
TGCATCCTCCAAGCTCAGGAAAACATCTATTCAACCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCT
ACAGAGCATGATAACC---CCGGATCCGGATTTCAGTTTGTAGAACATGGAAAAAAGGATCACCACCAGCA---------
---------------GCAGCAGCAGCACAACCATCTTATA----------AAGAACTCCATCAGTGACGACGAGGAGCAT
GATATGACCGAGGATACTACTGATGCCCAGAGTGGCAAGGGCAAAAAAGGCTCGGCATGGCATCGGATGAAGTGGACTGG
TTCAATGGTTAAGCTTTTGATTACCGCAGCGTCTTACACGGGGGAGGATCCTGGGGCGGATTTGGGCGGC---GGGAGGA
GGAACATTACAGTAATGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTTATGGGTGAAAGAGGCTGCAACGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGGATATCCTTGGTCGTGGTACTGC
TTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTGTCTGATAAGATGAAAGAAGATGCAAGGAAGA
TATTGAACTCTAAGCATTTATTCTATGAGATGATGTGTTCCTATCATAACAACAACCGTGTGAATTTACCCGAAGATCCT
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCCGAGGAGGGATGCAAGTGGAGATGCTGA
AGAAGATGACCACAATGCAGATTCTGATTATGAGGATCATGACGAAGAG---CATCAAGCAGTTCATCACAGTATGAGGG
ATCCTCCCATGAATAAAAGGATGTGTCATGCATTGGATCATGGTGATGTAGGTTTTCTCACCTCA---AGCTCGAATGAT
GGCAGTGGGAGTTTGGATCCCCATGGCATCGCATTGGATATCAACAAAGTTTTTCCGGATGGAACCAACCTGTCTGTTGT
GCGCAAGGAACTGGCTTCCCAAGCAATAGAGCTTCGGAAACGTCAGTTGCAGATTGAAGCACAGGAACTGGAAGTAACAG
AGCAACGTCTAAAGTGGGAGAGATTCAAGAGGAAGAAGGACAGGGAAATTGAAAGGATGGAATCGGAGAATGAAGAAATG
ATGCTCGAGAACAAGCGTTTGGAACTTCAGCTAAAGCACAAGGAGCTAGAAGTTGAGCTTAAGCTAAAAGGCAATCCAGA
CCATGAATGA----------------------------------------------------------------------
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--------------------------------------------
>chr1B_1_TraesCS1B01G472000
AGCATCCTGATTGCAGTGTTATAGACCGTCAGATGGCACCTAAATCCATCTCTGATTAGTTTTTTCCTTCCCATCTATCC
ACGGGGCCCAACCAGACTCAGTTTGCAGCTGGAACTCGGTCCCTGTCTAGGTTTTCCCTTAACCCAGGGTGTCCCTTTAT
TTAATCAAACCTCAAGATAACCATTGCTTATGAACATAATGAATATGGCAGACATAAAATTTAATATGGAAGTTTGTAAA
CGATCTTTAGGTTCAGACTGCCACATTTGTAGGTTCAGACTAGCATATCACACTTCTCAGGACACGGTGAAGGTATCATC
CAGATGTGGTTAATCGTGAATGTATACAAAGAAAGGTTTATTTGTCAGTGCGTGTGTGGCTCCACCTCTTGAAAATGCCA
ACGGACAGCAGTTGTCCTGTTTTTGTTGCATAGGAAAAAGTGAATGGTCCAACCGTACTCTTTTATTTAATTGCGCTCTG
AGCATCAACTGAATTTGAGTTTTTTTTTCTGAATAAATTTGAGTGTTTATTGACAGCCTGATTTGGACCAGAACCCTGAG
CCATTGACTAAAACACTAA-TTTTTTGTATGCGGTATCATATTTGAATATGCGTCAGACGTACAGGCTGTCTGCCCCAAA
CTCTATTCACCGCAGCAGCTTATGACCGACCATGTTATGGTTATGTTTTAAACCTACCGTCTTATATTATGATATTGTAT
AACCTTTTTGTTCTGTAGGTTCTTAGCGCCTTGGCATGCGTAACATGGCAGCCTTTTCATTTGTTTCTTGCAATAGTTAG
CTAGTCAGT------------------------------TAGCTATTTAGTTGTGGCAACATTGAGAAGTATACAGATGT
GCAAATATGCATGT---GCAGGGCTTTTGATAATTTGTCCAAATT-ACTATGCAGGGCGCTATTGTGATATTGAAGCGAA
GACCTGTGGCACCTCCTGTACCTTTTGTATGGTATTGACAAGAAGTACAACTGCCTGGGTGATTATTTTGGGATAATGGA
CCGCAGTAACCTACCTCCTGGAAACACGACGCAAGGAGCTCCTTATGGTAGTTTGAATGTACATGGTAACTCCATGCAAA
TGCATCCTCCAAGCTCAGGAAAACATCTATTCAACCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCT
ACAGAGCATGATAACC---CCGGATCCGGATTTCAGTTTGTAGAACATGGAAAAAAGGATCACCACCAGCA---------
---------------GCAGCAGCAGCACAACCATCTTATA----------AAGAACTCCATCAGTGACGACGAGGAGCAT
GATATGACCGAGGATACTACTGATGCCCAGAGTGGCAAGGGCAAAAAAGGCTCGGCATGGCATCGGATGAAGTGGACTGG
TTCAATGGTTAAGCTTTTGATTACCGCAGCGTCTTACACGGGGGAGGATCCTGGGGCGGATTTGGGCGGC---GGGAGGA
GGAACATTACAGTAATGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTTATGGGTGAAAGAGGCTGCAACGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGGATATCCTTGGTCGTGGTACTGC
TTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTGTCTGATAAGATGAAAGAAGATGCAAGGAAGA
TATTGAACTCTAAGCATTTATTCTATGAGATGATGTGTTCCTATCATAACAACAACCGTGTGAATTTACCCGAAGATCCT
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCCGAGGAGGGATGCAAGTGGAGATGCTGA
AGAAGATGACCACAATGCAGATTCTGATTATGAGGATCATGACGAAGAG---CATCAAGCAGTTCATCACAGTATGAGGG
ATCCTCCCATGAATAAAAGGATGTGTCATGCATTGGATCATGGTGATGTAGGTTTTCTCACCTCA---AGCTCGAATGAT
GGCAGTGGGAGTTTGGATCCCCATGGCATCGCATTGGATATCAACAAAGTTTTTCCGGATGGAACCAACCTGTCTGTTGT
GCGCAAGGAACTGGCTTCCCAAGCAATAGAGCTTCGGAAACGTCAGTTGCAGATTGAAGCACAGGAACTGGAAGTAACAG
AGCAACGTCTAAAGTGGGAGAGATTCAAGAGGAAGAAGGACAGGGAAATTGAAAGGATGGAATCGGAGAATGAAGAAATG
ATGCTCGAGAACAAGCGTTTGGAACTTCAGCTAAAGCACAAGGAGCTAGAAGTTGAGCTTAAGCTAAAAGGCAATCCAGA
CCATGAATGATTTATGTTGGATCAGTCAGAAGCTTTGGTTTGCAGTATGGTAAGCATGAATGTTCTGGATATTCT---TT
TTTTAAATAGCTTTCACATTCTCTGGAAAACAACATGTG-----------T--------------AGTCGATGCGATATT
TGTGTCCCT-GAGATGTCTTTGCAGGTGTACATTAAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GGTTTTGCATAAATATAAGAGAGGCGTTAATTAGAGCATTAATGGATTTGCATAAA
TAAGAAAAACCGTCAATTAGGCCATCTACTTGTGAGTGATTTACACTAACAATATCCATAATGACTGTCATTTACATGGT
GTACCTGGGTGATACATAATTATCGAA-----------------------------------------------TAGCAG
ATTAGATACAGACTACAGACAGTAAACCATATTTCATATTAGCAGATTACGGTGTACCTGGGTTTTGCATGCTTGATATC
ATTCGTTTCCAATGTTTCAGGTCGAAGGTGGCTTTCGACAAGAGTATGGCTGTTCAAGAAAAAACCCTCAAGACCAACTC
TGAGATGTGTCGGACATTGTCGAGTGATCTTCTAGTTGCCTCTCGTTCTTGTTGTTGT---AAACATTTGTTGTAGTACC
AGGCTTGCAGTAAGCATGTCACCTTATGGTGATAACTAGTTCCTCAGCTCTTTCGGTGACTGTTA-CTTCGGTTATGGTG
AACATATAATAAATGTGTGCCGGACAACAAAAATTCACATGGAAGTTTGAAAACAATCTTAAGGTTCAGACCGTCACATT
TTCTGGATTCA----GACTAGCATT---TGGTACCTTTTGGGATCTAGCAGTTGGAAACTTAATTGAATTGTGTGAAATT
ATCATATCATCCATATGCTGCGGATGTATACAGGAAAGTTATATTTGTCAGTGCGTGTAGCTTTTGAAAATATTCACTAG
AAAGCTTAATTGAATTGTCTTGCAAATGACAACATGTAACAGTTGTAATGTTTTCGTTCCATAGAAAAAGTAGGATGCAA
ATTTGGAAGCTTTAGATATCCTCCAACGCTGCTTAGTTCAACAA
>chr1A_567
--------------------------------------------------------------------------------
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------ACTAAAACGCTAA-TTTTTTGTATGCGGTATCATATTTGAATACGCGTCAGACATACAGGCTGTCTGCCCCAAA
CTCTATTCACCGCAGCAGCTTATGACCGACGATGTTATGGTTATGTTTTAAACCTATCATCTTATATTATGATATTGTAT
AACCTTTTTGTTCTGTAGGTTGTTAGTGCCTTGACATGCCTAACATGGCAGCCTTTTCATTTGATGCTTGCAGTAGTTAG
GTAGTC------------------------------AGTTAAATATTTGGTTGTGGCAACATTGAGAAGTATACAGATGT
GCAAATATGCATGT---GCAGGGCTTTTGACAATTTGTCCAAATT-ACTATGCAGGGCTATATTGTGATATTGAAGTGAA
GACCTGTGGCACCTCCTGTACCTTTTGTATGGTATTGACAAGAAGTTCAACTGCCTGGGTGATTATTTTGGGAAAATGGA
CCGCAGTAACCTACCTCCTGGAAACACGACGCAAGGAACTCCTTATGCTAGTTTGAATCTACATGGTAACTCCTTGCAAA
TGCATGCTCCAAGCTCAGGAAAACATCTATTTAACCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCT
ACAGAACATGATAACC---CCGGATCCGGATTTCAGTTTGTAGAACATGGAAAAAAGGATCACCACCAGCA---------
---------------GCAGCAGCAGCACAACCATCTCATA----------AAGAACTCCATCAGTGACGACGAGGAGCAT
GATATGACTGAGGATGCTACTGATGCCCAGAGTGGCAAGGGCAAGAAAGGCTCAGCATGGCATCGGATGAAGTGGACTGG
TTCGATGGTTAAGCTTTTGATTACCGCAGCATCTTACACGGGGGAGGATCCTGGGGCGGATTTGGGCGGC---GGGAGGA
GGAACATTACAGTAATGCAGAAGAAGGGCAAGTGGAAAGCAATATCAAAGGTCATGGGCGAAAGGGGCTGCAATGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGGATATCCTTGGTCGTGGTACTGC
TTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTTTCCGATAAGATGAAAGAAGATGCAAGGAAGA
TATTGAACTCTAAGCATTTATTCTATGAGATGATGTGTTCCTATCATAACAACAACCGTGTGAATTTACCCGAAGATCTT
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCCAAGGAGGGATGCAAGTGGAGATGCTGA
AGAAGATGACCATAGTGCAGATTCTGATTACGAGGATCATGACGAAGAG---CATCAAGCAGTTCATCACAGTATGAGGG
ATCCTTCCATGAATAAAAGGATGTGTCATGCATTGGATCATGGTGATGCAGGTTTTCTCACCTCA---AGCTCGAATGAT
GGTAGTGGGAGTTTGGATCCCCATGGCATCGCATTGGATATCAACAATGGTTTTACGGATGGAACCAACCTGTCTGTTGT
GCGGAAGGAACTGGCTTCCCAAGCAATAGAGCTTCGGAAACGTCGCTTGCAGATTGAAGCACAGGAACTGGAAGTAACAG
AGCAACGTCTAAAGTGGGAGAGATTCAAGAGGAAGAAGGACAGGGAAATTGAAAGGATGGAATCGGAGAATGAAGAAATG
ATGCTCGAGAACAAGCGTTTGGAACTTCAGCTAAAGCACAAGGAGCTAGAAGTTGAGCTTAAGCTAAAAGGCAATCCAGA
CCATGAATGATTTATGTTGGATCAGTCAAAAGCTTTGGTTTGCAGTATGGTAAGCATGAATGTTATGGATATTCT---TT
TTTTAA-TAGCTTTCACATTCTCTGGAAAACATGTGTCAGTGTCAGATTTT--------------AGTCGATTCGATATT
TGTGTCCCT-GAGATATCTTTGCAGGTGTACAATAAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GGTTTTGCATAAATATAAGAAAGGCGTTAATTAGAGCATTAATGGATTTTCATAAA
TAAGAAAAAG------------CATCTACTTGTGAGTGATTTACACT-ACAATATCCATAATGCCTGTCATTTACATGGT
GTACCTGGGTGATACATAATTATCGGA-----------------------------------------------TAGCAG
ATTAGGTGCAGACTACAGACAATAAACCATATGGCATATTAGCATATTACAGTGTACCTGGGTTTTGCATGCTTGATATC
ATTCCTTTCCATTGTTTCAGGTCGAAGTTGGCTTTTGACAAGAATATGGCTGTTCAAGAAAAAACCCTGAAGACCAACTC
GAGACCCGTT-GGACATTGTCGAGTGATCTTCTAGTTGCCTCTCGTTGTTGTTGTTGT---CAACATTTGTTGTACTACC
AGGCTTGCAGTAAGCATGTGACATCATGGTGACAACTAGTTCCTCAGCTCTTTCGGTGACGGTTT-CTTCGGTTATGGTG
AACATATAATAAATGTGTGCCGGACAAGGAAAGTTCACATGGAAGTTTGAAAACTACCCTAAGGTTCAGACTGTCACATT
TTATAGATTCA----GACTAGCATT---TCGTACCTTTTGGGATCGAGCAGTTGGAAGCTTAATTGCATTGTGTGAAGGT
ATCACATTATCCATATGCTGCGGTTGTATGCAAGAAGGGTATATTTGTCAGTGTGTGT----------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1D_567
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------ACTAAAACACTATTTTTTTTGTATGCGGTATCATATTTGAATATGCGTCAGACATACAGGCTGTCTGCCCCAAA
CTCAATTCACCGCAGCAGCTTATGACGGACAATGTTATGGTTATGTTTTAAACCTATCATCTTATATTATGATATT-TAT
AACCTTTTTGTTCTGTAGGTTGTTAGTGCCTTGACATATCTAACATGGTAGCCTTTTCATTTGTTTCTTGCAATAGTTAG
CTAGTCAGTTAACTATTTGGTTCCCCGAAAAAAAAAAGTTAACTATTTGGTTGTGGCAACATTGAGAAGTATACAGATGT
GCAAATATGCATGT---GCAGGGCTTTTGATAATTTGTCCAAATT-ACTATGCAGGGCGATATTGTGATATTGAAGTGAA
GACCTGTGGCACCTCCTGTACCTTTTGTATGGTATTCACAAGAAGTACAACTGCCTGGGTGATTATTTTGGGAAAATGGA
CCGCAGTAACCTACCTCCTGGAAACACGACGCAAGGAACTCCTTATGGTAGTTTGAATGTACATGGTAACTCCATGCAAA
TGCATGCTCCAAGCTCAGGAAAACATCTATTCAGCCAATCTCAGATGCCAGGGAGTTTCACAATGCCTATCAACCGGGCT
ACAGAACATGATAACC---CCGGATCCGGATTTCAGTTTGTAGAACATGGAAAGAAGGATCACCACCACCACCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCACAACCATCTCATA----------AAGAACTCCATCAGTGATGACGAGGAGCAT
GATATGACCGAGGATGCTACTGATGCCCAGAGTGGCAAGGGCAAGAAAGGCTCAGCATGGCATCGGATGAAGTGGACTGG
TTCGATGGTTAAGCTTTTGATTACCGCAGCATCTTACACGGGGGAGGATCCTGGGGCGGATTTGGGCGGT---GGGAGGA
GGAACATTACAGTAATGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTCATGGGTGAAAGAGGCTGCAACGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAACAAGAGATACAAAAGGCTTACGGATATCCTTGGTCGTGGTACTGC
TTGCAATGTTGTGGATAATCCAGCACTCCTTGATTGCATGAATAATCTTTCCGATAAGATGAAAGAAGATGCAAGAAAGA
TATTGAACTCTAAGCATTTGTTCTATGAGATGATGTGTTCCTATCATAACAACAACCGTGTGAATTTACCCGAAGATCTT
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCAAAGGAGGGATGCAAGTGGAGATGCTGA
AGAAGATGACCACAGTGCAGATTCTGATTACGAGGATCATGACGAAGAG---CATCAAGCAGTTCATCACAGTATGAGGG
ATCCTTCCATGAATAAAAGGATGTGTCATGCATTGGATCATGGTGATGCGGGTTTTCTCACCTCA---AGCTCGAATGAT
GGTAGTGGGAGTTTGGATCCCCATGGCATCGCATTGGATATCAACAAGGGTTTTACGGATGGAACCAACCTGTCTGTTGT
GCGGAAGGAACTGGCTTCCCAAGCAATAGAGCTTCGGAAACGTCGGTTGCAGATTGAAGCACAGGAACTGGAAGTCACAG
AGCAACGTCTAAAGTGGGAGAGATTCAAGAGGAAGAAGGACAGGGAAATTGAAAGGATGGAATCGGAGAATGAAGAAATG
ATGCTCGAGAACAAGCGTTTGGAACTTCAGCTAAAGCACAAGGAGCTAGAAGTTGAGCTTAAGCTAAAAGGCAATCCAGA
CCATGAATGATTTATGTTGGATCAGTCAAAAGCTTTGGTTTGCAGTATGGTAAGCATGAATGTTCTGGATATTCT---TT
TTTTAA-TAGCTTTCACATTCTGTGGAAAACAACATTTG-----------TCAGTGTCATATTTTAGTCAAGGCAATATT
TGTGATCCGCGAGATGTCTTTGCAGGTGTACATTAAGGCCTTGTTTGGTACTAGTGTATTTTAGGGAATTGGTGGGGATT
ATCACGGTCAAACCCCTAAATCCCCACATATCCCAAAACACCATTTGGTTCTAGTGTATTTGACATGTTTTATCCTCACA
TTTCCCCACAAATCCCCAAACTCTAGTGCATTTTTCTCAATACCGAATACACTGCCCCTACCTAGTGGATTGGGGATAAA
TGGGGATTTGAAGGGATTGGGTGAAGGTTGGGGTTTCACCCAATCCCTGTGGGGATTATCCCCACCAATCCCCTCAAAAG
CCCTAGTATCAAACAAGGCCTAAGGGTTTTGCATAAATAAGAGAATGTATTAG--TATAACATTAAGGGTTTTGCATAAA
TAAGAAGTGTCAGCTAGTT---CACCTACTTGCGAGTGATTTACACTAACAATATCCATAATGACTGTCATTTACATGGT
GTAACTGGGTGGTACATAATTATCGAATACTCCCTCCGTCCATTTGAGGGACAAGTTTTTTCGGACGGAGGGAGTAGCAG
ATTAGATACAGACTACAGACAATAAACCATATGTCATATTAGCAGATTATGGTGTACCTGGGTTTTGCATGCCTGATGTC
ATTCCTTTACAATGTTTCAGGTCGAAGGTGGCTTTTGACAAGAATATGGCTGTTCAAGAAAAA-CCCTGAAGACCAACTC
GAGACCCGTT-GGACATTGTCGAGTGATCTTCTAGTTGCCTCTCGTTGTTGTTGCTGTTGTAAACAATTGTTGTACTACC
AGGCTTGCAGTAAGCATGTCACCTTATGGTGATAACTAGTTCCTCAGCTCTTTCGGTGACGGTTTTCTTCGGTTATGGTG
AACATATAATAAATGTGTGCCGGACAACCAAAATTCACATGGAAGTTTGAAAACAATCTTAAGGTTCAGACTGTCACATT
TTCTAGATTCACTCAGACTAGCATTTCGTCGTACCTTTTGGGACCAAGCAGTTGGAAACTTAATTGAACTGTGTGAAGG-
----TATCATCCATATGCTGCTGATGTATATCAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr4B_812
CTATTTTGTTCA--------------------------------------------------------------------
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-------------------------------------------------------GCAACATTGAAAAATATACAGCTGT
GCAAATATACATTTCCGGCTGGGACTTTAATAATTTCTCCAAACTTACTATGCAGG--------GTGATATTGAAGTGAA
GACATATGACACCTCCTCTACCTTTTGTATGGTATTGACAAGAGGTACAACCACCTGAGTGATCTTTTTGAGAAAATGGA
AGGCAGCAACCTACCTACTGGAAACATGATGCAAGGAATTCCTTATAGTAGTTTGAATGTGCACGGTAACTCCATGCAAA
TGCATGCTTCAAGCTCAGGAAAACAGCTATTCAACCAATCTCAGATGCTAGGGAGTTTTGCAATGCCTATCAACAGGGCT
ACAGCACGTGATAACC---CT------GGATTTCAATTTGGAGAACATGAAAAAAAGGATCACCACCAG-----------
-------------------------------CA---CA-GTCATTACTCTAAGGACTCCATCAG---TGATGAGGAGCAT
GATATGACCGAGGATGTTACTGATACCCAGAATGACAAAGGCAAGAAGGGTTCAGCATGGCATCGGATGAAGTGGACAGG
TTCCATGGTTAAACTTTTGATTACCGCAGCATCCTACACGGGGGAGGATCCTGGGGCGGATCAA---GGC---GGAAGGA
GGAACATTGCAATAGTGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTCATGGGCGAAAGAGGCTGCAGTGTGTCA
CCACAGCAGTGCGAGGATAAGTTCAATGATCTCAACAAGAGATATAAAAGGCTTACAGATATCCTTGGTCGTGGTACTGC
TTGCAATGTTGTGGAAAATCCAGCACTTCTTGATAGCATGCATCATCTTTCTGATAAGATGAAAGAAGATGCAAGGAAGA
TATTGAACTCTAAGCACTTATTCTATGAGCAGATGTGTTCATATCATAACAACAACCGTGTCAATTTACCTGAAGATCTC
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCTGAGGAGGGATGCAAGTGCAGATCCTGA
AGAGGGTGAGCAGAGTGCAGATTCTGATTACGAGGAGCATGACGAAGAG---CATCAAACAGTTCATACCAACTTGAGGG
ATTCTTACATGAATAAAAGAATGTGTCGTGCGGTGGATCATGGTGATGTGGGTTTTGTCACCTCA---AGCTCAAACGGT
GTTAGTGGGAGGTTCAATCCTCATGACATCACATTGGGTATCAACAATGCTATTCCAGGTGGAGCCAACTTGTCTTTTGC
GCGGAAGGACTTGACTTCACAACAAATAGAGTTTCAGAAACATCGCTTGCACACCCAAGAACAAAAACTGGAAGTGGCAA
AACAACGTCTCAAGTGGGAGAGATTTAGGATGAAGAAGGACAGGGAAATTGAAAGGATGACATTGGAGAATGAACAAATG
ATGCTTCAGCAGAAGCGTTTGGAACTTCAGCTAAGACACCAGGAGCTAGAGCTTGAGCT------AAAAGGCAATGCAAA
TCATGCATGATAGTTGTTTGATCAGAGT-----TTTGGTTTGCAATATGGTAAGCATGAAAGTTCTTGATATTCATCATT
TTTGAA-TAGCTT-------------------------------------------------------------------
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--------------------------------------------
>chr4A_828
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------ACATTGAGAAATATACAGCTGT
GCAAATATACATTTCCGGCCGGGGCTTTAATAATTTCTCCAAATTTACTATGCAGGA--------TGGTATTGAAGCGAA
GACATGTGACACCTCCTCTACCTTTTGTATGGTATTGACAAGAGGTACAACCACCTGGGTGATCTTTTTGAGAAAATGGA
AGGCAGCAACCTACCTACTGGAAACATGATGCAAGGAATTCCTTATAGTGGTATGAATGTGCACGGTAGCTCCATGCAAA
TGCATGCTACAAACTCAGGAAAACAGCTATTCAACCAATCTCAGATGCTAGGGAGTTTCGCAATGCCTATCAACAGGGCT
ACAGCGCCTGATAACC---CT------GGATTTCAATTTGGAGAACATGAAAAAAAGGATCACCACCAGCA---------
---------------GCAGCAGCAGCAGCAGCA---CA-GTCATTACTCTAAGAACTCCATCAGTGATGAGGAGGAGCAT
GATATGACCGAGGATGTTACTGATACCCAGAATGACAAAGGCAAGAAGGGTTCAGCATGGCATCGGATGAAGTGGACAGG
TTCCATGGTTAAACTTTTGATTACCGCAGCATCCTACACGGGGGAGGATCCTGGGGCGGATCAA---GGC---GTAAGGA
GGAACATTGCAATAGTGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTCATGGGCGAAAGAGGCTGCAGTGTGTCA
CCACAGCAGTGCGAGGATAAGTTCAATGATCTCAACAAGAGATATAAAAGGCTTACAGATATCCTTGGTCGTGGTACTGC
TTGCAGGGTTGTGGAAAATCCAGCACTTCTTGATAGCATGCATCATCTTTCTGATAAGATGAAAGAAGACGCAAGGAAGA
TATTGAACTCTAAGCACTTATTCTATGAGCAGATGTGTTCCTATCATAACAACAACCGTGTCAATTTACCTGAAGATCTC
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGATGAGCATGATCTGAGGAGGGATGCAAGTGCAGATCCTGA
AGAGGGTGATCAGAGTGCAGATTCTGATTACGAGGAGCATGACAAAGAG---CATCAAACAGTTCATACCAACTTGAGGG
ATTCTTCCATGAATAAAAGAATGTGTCATGCGGTGGATCATGGTGATGTGGGTTTTGTCACCTCA---AGCTCAAACGGT
GTTAGCGGGAGGTTCAATCCGCATGACATCACATTGGATATCAACAATGCTATTCCAGGTGGAGCCAACTTGTCTTTTGT
GCGGAAGGACTTGACTTCACAACAAATAGAGCTTCAGAAACATCGCTTGCAGACCCAAGAACAAAAACTGGAAGTGGCAA
AACAACGTCTCAAGTGGGAGAGATTTAGGATGAAGAAGGACAGGGAAATTGAAAGGATGACATTGGAGAATGAACAAATG
ATGCTTCAGCAAAAGCGTTTGGAACTTCAGCTAAGACACAATGAACTAGAGCTTGAGCT------AAAAGGCAATGCAAA
TCATGCATGATAGTTGTTTGATCAGAGT-----TTTGGTTTGCAATATGGTAAGCATGAAAGTTCTTGATATTCATCACT
TTTGAA-TAGCTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------
>chr4D_828
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------ACATTGAGAAATATACAGCTGT
GCAAATATACATTTCCGGCCGGGGCTTTAATAATTTCTCCAAATTTACTATGCAGGA--------TGATATTGAAGCGAA
GACATGTGACACCTCCTCTACCTTTTGTATGGTATTGACAAGAGGTACAACCACCTGGGTGATCTTTTTGAGAAAATGGA
AGGCAGCAACCTACCTACTGGAAACATGATGCAAGGAATTCCTTATAGTGGTTTGAATGTGCACGGTAACTCCATGCAAA
TGCATTCTTCAAGCTCAGGAAAACAGCTGTTCAACCAATCTCAGATGCTAGGGAGTTTCGCAATGCCTATCAACAGGGCT
ACAGCGCCTGATAACC---CT------GGATTTCAATTTGGAGAACATGAAAAAAAGGATCGCCACCACCA---------
---------------CCACCAGCAGCAGCAGCAGCACA-GTCATTACTCTAAGAACTCCATCAGTGATGAGGAGGAGCAC
GATATGACCGAGGATGTTACTGATACCCAGAATGACAAAGGCAAGAAGGGTTCAGCATGGCATCGGATGAAGTGGACAGG
TTCCATGGTTAAACTTTTGATTACCGCAGCATCCTACACGGGGGAGGATCCTGGGGCGGATCAA---GGC---AGAAGGA
GGAACATTGCAATAGTGCAGAAGAAGGGCAAATGGAAAGCAATATCAAAGGTCATGGGCGAAAGAGGCTGCAGTGTGTCA
CCACAGCAGTGCGAGGATAAGTTCAATGATCTCAACAAGAGATATAAAAGGCTTACAGATATCCTTGGTCGTGGTACTGC
TTGCAGTGTTGTGGAAAATCCAGCTCTTCTTGATAGCATGCATCATCTTTCTGATAAGATGAAAGAAGATGCAAGGAAGA
TATTGAACTCTAAGCACTTATTCTATGAGCAGATGTGTTCCTATCATAACAACAACCGTGTCAATTTACCTGAAGATCTC
GCACTTCAGCACTCACTACAGGTTGCTCTTAGATGTAAAGAGGAGCATGATCTGAGGAGGGATGCAAGTGCAGATCCTGA
AGAGGGTGAGCAGAGTGCAGATTCTGATTACGAGGAGCATGACAAAGAG---CATCAAACAGTTCATACCAACTTGAGGG
ATTCTTCCATGAATAAAAGAATGTGTCATGCGGTGGATCATGGTGATGTGGGTTTTGTCACCTCA---AGCTCAAACGGT
GTTAGTGGGAGGTTCAATCCGCATGACATCACATTGGATATCAACAATGCTATTCCAGGTGGAGCCAACTTGTCTTTTGT
GCGGAAGGACTTGACTTCACAACAAGTAGAGCTTCAGAAACATCGCTTGCAGGCCCAAGAACAAAAACTGGAAGTGGCAA
AACAACGTCTCAAGTGGGAGAGATTTAGGATGAAGAAGGACAGGGAAATTGAAAGGATGACATTGGAGAATGAACAAATG
ATGCTTCAGCATAAGCGTTTGGAACTTCAGCTAAGACACAATGAGCTAGAGCTTGAGCT------AAAAGGCAATGCAAA
TCATGCATGATAGTTGTTTGATCAGAGT-----TTTAGTTTGCAATATGGTAAGTATGAAAGTTCTTGATATTCATTACT
TTTGAA-TAGCTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr5D_992
--------------------------------------------------------------------------------
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------------------------------------------------------------------TTTGGGAGAATGGA
AGGCAATAACCTGCCACCTGGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAA
TGCACGGTCCAAGCTCCGATAATCCGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTT
ACAGCTTCTGACCACTTGTCG------GAATTTCAATTCAGAGAACAAAGGAAGGCTGATCACCACCAGGT---------
---------------CCACCACCACCACTATCC---CA-AG---------AAGGACTCCATGAGCGATGATGAGGAGCAT
GGTCTGAACGAGGATACCACTGATAGCCACAGCGGCAAGGGAAAGAAGGGCTCAGCATGGCAGCGGATGAAGTGGACTGA
TTCAATGGTTAAGCTTTTAATTACTGCAGCGTCCTACACTGGTGAGGATCCAGGAGCTGATTTA---GGATGTGGAAGGA
GGAACTGTGCAATGGTGCATAAGAAAGGCAAGTGGAAGGCAATATCAAAGGTGATGGGCGAGCGAGGTTGCAATGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAGATATCCTTGGTCGGGGTACAAC
TTGCAAGGTTGTGGAGAATCCAGCACTTCTGGATCGCATGGATAATCTCTCTGACAAGTTGAAAGATGACGCAAGGAAGA
TACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCGGATTAGTTTGCCTGAAGATCCT
GCACTTCAGCGTTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGAGAGGAGCAAGTGGAGATGCCGA
TGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCAGGTGGCGCATAGCAATAAAGGGG
GCTTACCCATGCAAAAGAAGATGTGGTATACAGCGGATCACGAGGATGCTGGTTTTGGGAACTCTTTGAGTGCACACGAA
TGTAGCCGGAGGTCTAATCCCCATGGCATCACACTAGATATCAACAAAGTTGTTCCAGATGGAACCA-------------
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--------------------------------------------
>chr5B_992
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------TTTGGGATAATGGA
AGGCAATAACCTGCCACCTAGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAA
TGCACGGTCCAAGCTCCGGTAATCAGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTT
ACAAATTCTGACCACTTGTCG------GAATTTCAATTCAGAGAACAAAGGAAGG-TGATCACCACCAGGT---------
---------------CCACCACCACCACTATCA---CA-A----------AAGGACTCCATGAGCGATGATGAGGAGCAT
GGTCTGAACGAGGATACCACTGATAGCCACAGCGGCAAGGGAAAGAAGGGCTCAACATGGCAGCGGATGAAGTGGACCGA
TTCAATGGTTAAGCTTTTAGTTACTTTAGCGTCCTACACTGGTGAGGATCCAGGAGCTGATTTA---GGATGTGGAAGGA
GGAACTGTGCAATGGTGCATAAGAAAGGCAAGTGGAAGGCAATATCAAAGGTGATGGGCGAGCGAGGTTGCAATGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAGATATCCTTGGTCGGGGTAGAAC
TTGCAAGGTTGTGGAGAATCCAGCACTTCTGGATCGCATGGATAATCTCTCTGACAAGTTGAAAGATGACGCAAGGAAGA
CACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCGGATTAGTTTGCCTGAAGATCCT
GCACTTCAGCATTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGCGAGGAGCAAGTGGAGATGCCGA
TGAAGATGACCAGAGTTCAGACTCTGATTATGAGGA--------------------------------------------
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--------------------------------------------
>chr5A_992
--------------------------------------------------------------------------------
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------------------------------------------------------------------TTTGGGAGAATGGA
AGGCAATAACCTGCCACCTGGAAACTTTATGCAAGGAGCAACTTATGGCAGTTCAGACTTGCACCGGAATCCCATGCAAA
TGCACGGTCCAAGCTCCGGTAATCAGGGCTTCAACCACTCTCAGATACCTGGCAAATTCCCCATGCCTATGAACCAGGTT
ACAGATTCTGACCACTTGTCG------GAATTTCAATTCAGAGGACAAAGGAAGGCTGATCACCACCAGGT---------
---------------CCACCACCACCACTATCA---CA-AG---------AAGGACTCCATGAGCGATGATGAGGAGCAT
GGTCTGAACGAGGATACCACTGATAGCCACAGCAGCAAGGGAAAGAAGGGCTCAGCATGGCAGCGGATGAAGTGGACGGA
TTCAATGGTTAAGCTTTTAATTACTGCAGCGTCCTACACTGGTGAGGATCCAGGAGCTGATTTA---GGATGTGGAAGGA
GGAACTGTGCAATGGTGCATAAAAAAGGCAAGTGGAAGGCAATATCAAAGGTGATAGGCGAGCGAGGTTGCAATGTGTCA
CCGCAGCAGTGCGAGGATAAGTTCAATGACCTCAATAAGAGATACAAAAGGCTTACAGATATCCTTGGTCGGGGTACAAC
TTGCAAGGTTGTGGCGAATCCAGCACTTTTGGATCGCATGGATAATCTCTCTGACAAGTTGAAAGATGACGCAAGGAAGA
TACTGAGCTCAAGGCACTTATTCTATGAGGAGATGTGCTCCTACCATAATAATAACCGGATTAGTTTGCCTGAAGATCTT
CCACTTCAGCGTTCACTGCAGTTTGCTCTTAGGTGCAAAGAGGAAAATGATATGATGAGAGGAGCAAGTGGAGATGCCGA
TGAAGATGACCAGAGTTCAGACTCTGATTATGAGGAAGATAATGATGAGGACCATCATGTGGCGCATAGCAATAAAGGGG
GCTTACCCATGCAAAAGAAGATGCGGTATACAGCGGATCACGAGGATGCAGGTTTTGGGAACTCTTTGAGTGCACACGAA
TGTAGCCAGAGGTCTAATCCCCATGGCATCGCACTAGATATCAACAAAGTTGTTCCAGATGGAACCA-------------
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--------------------------------------------
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------------------------------------------------S--------------------
------------------------------S-------------------------S-S---------------------
---------------------S----S------S-----S----------------------------------------
-----------------------------------------S------S-------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------S--------S--------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
---S----------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
------S-----------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------S-SS-S-S-SSSS----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------S-----------------------------------------------
----S------------------------------S-------S------------------------S-----------
SSSSSSSSS-S------------------------------------S---------------------------S----
------------------------------------------------------------S---S---------------
----------------------------S------------------------------------------S--------
----S------------------------S---------------S-------------------------------SS-
--------------------------------S---S-S--------------S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------ACCAGAACCCTGAG
CCATTG--------------------------------------------------------------------------
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--------------------------------------------
>reverse_1573
--------------------------------------------------------------------------------
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----------------------------------------------------TATGGGTGAAAGAGGCTGCA--------
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--------------------------------------------
>forward_1317
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AGCAGCAGCACAACCATCTT-------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_3286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----TGTGTCGGACATTGTCGAGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
