>input_sequence_54276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATGGCGGAGCACAAGCGTAC
AGTTTCCACCCTCGTTCTCCTCCTCCTCCTCTCCTTCTTCTCGGCGTCGACGAATGCCACACGGCCACCAGCAACGCTCC
GCATCCCCGTCGTCCACCGCGACGCGGTCTTCCCGCCGCCGCCGGGCGCCAGCCGGGGTAACCTCCTAAGCCGCCG----
--------CGCGGCGGGCTACGCCACCCTCAAGGCGTCCCTCT-------GCCTCCGCCGCTCCTCCGCGCACAACGACC
GCCTCCACTCCCCAGTCATGTCCGGGCTCCCCTTCGACAGCGGCGAGTACTTCGCGTCCGTCGGCGTGGGCACCCCGTCC
ACCACCGCGCTGCTCGTCATCGACACCGGGAGCGACCTCATCTGGCTGCAGTGCAAGCCCTGCCGCCGCTGCCACCGCCA
GATGAGCCTGCTCTACGACCCCAAGGGCTCCAGCACCTACCGCCAGATCCCATGCTCGTCGCCGCGGTGCTTCCCTCGCC
AGGGCTGCGACGGCAGCACCGGGGCCTGCGGGTACACCATGGTCTACGGCGACGGCTCCGGCAGCAGGGGCAACCTCGCC
ACCGACAGGCTCGTCTTCTCCAACGACACGTCCGTGGACAGCATCGTCATCGGGTGCGGCCACGACAACGAGGAGCTGTT
CGACTCGTCGGCCGGGGTGCTGGGCGTCGGCCGCGGCGCCGGCTCCCTGGCGACGCAGGTGGCGCCGACCTACGGGCGCT
ACTTCGCCTACTGCCTCGGCGACCGCACGTCCGTCGCGCGGAGCAGCGGCTCCTACCTCGCCTTCGGCCGCACGCCGGAG
CCGCTGTGCACGGCCTTCACCCCGCTGCTGTCCAACCCGCGGCGCCCCAACCTCTACTACGTGAACGTGGCCGGCTTCAG
CGTCGGCGGCAAGCGGGTCACCGGGGGCTTCTCCAGCTGCAGCCTCTCCTTGGACCCGGCGACCGGGCGGGGCGGCCTGG
TGGTGGACTCGGGCACGTCCATATCGCGGCTCCCCAGGGACGCGTACGCGGCGCTGCGCGACGCCTTCGACGCGCGCGCG
GCCGCGGCCGGGATGCGGAGGCTGGCCCGGGGCATGTCAGTGTTCGACGCGTGCTACGAGCTCCGAGGCGCCAGCGTGCC
GGCAGTGACGCTGCACTTCGCCGGCGGGGCGGACGTGGCGCTGCCCCCGGGGAACTACTTCATACCCGAGCAGGGCGGGA
AGTACCACTGCCTGGCGCTGGAGGCGACGGACGACGGGCTCAGCGTGCTCGGCAACGTCCTGCAGCAGGGATTCCGGGTC
GTGTTCGACGTCGAGAAGGAGCGTGTCGGGTTCGCTCCAAATGGCTGCTAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr3B_1_TraesCS3B01G322500
ATTTCGTATGTTGTACAGGACAACTTTATGTTTATGCTTACGCCCGAGGGAGGAAGACGACACGCGCGGAGCATAAATTA
CTAGCCATACACGGAGTAATTTATATGCATCGTCCGTGGCTAGGTAG---TAGTGTTAGGGTTGCTAGGTTTATTTCCAA
CACGGTGAACCACCAAACAACCAACTTGGCCAGCTGCGCTGTTCCATTTGATGATA---TAAAAGTACATCGTGATTCCC
GAGGCATTGACTCGCCTTGCTCGTGCAAATACTATATTGCCACCTGCTGGCACTGTTGTAATCCGAGTAGTGCAGCGCCT
AGTGTTGTCTAGGCGCTATACTGTATAGTGTAGCGCTTAGCTATTAGGCGTTGCACATTGACTTAGCATTTTTTGGGCAG
TTTGAGATGCGACACTGGCTAGGCATGTAGCGTCTGAGAGTTAGGCGCTGCACAGTATAGTGTGACGCTTAGATTTCGGG
CGCTACACAAAAATGTCAGCTAAGGCAAAAAAAATCAAACACAGTTCAGTTTGTGAAATAATTTTGTCCATAGCTCAGAT
TTGTGGATTTTGCCACCGCTGCTACAACGGTGACACAGGGGATGCTGCAACCAGGCATGTGGGTGCTCAGGAACCACGGA
GAGTTGGAACCAACCTCCACCTCTACATGCAACGTCACTGCAAAGCAGGGTGCTGCCCAGGAACAGCTACTACAAAGCCG
GGGGTGTTGGGACGGTGATCGGTGATCGCGGGACCGCCAACCTGCCGTGCTGCCACGTGCTTTTCCCAACGGAGAAGTTG
CGAAGGAGTAGTGCAAGGGATCAAAGAAAAACGGCAGAGAAAACTGAAGGCACCCAGCGATTAATCAAGAATTTGAACAA
CGTATGCGCAAGAAGAAACT--------------CCATGAAACCGCCACCTGGGTCCTGATCCCCTGCTCCTCAGAAGGA
TCCAACATACAGTACTACCTCTCTTTTCGCTTCACTCCATTCTCAAACCTCCATCCTACCATGGCGGAGCACAAGCGTAC
AGTTTCCACCCTCGTTCTCCTCCTCCTCCTCTCCTTCTTCTCGGCGTCGACGAATGCCACACGGCCACCAGCAACGCTCC
GCATCCCCGTCGTCCACCGCGACGCGGTCTTCCCGCCGCCGCCGGGCGCCAGCCGGGGTAACCTCCTAAGCCGCCG----
--------CGCGGCGGGCTACGCCACCCTCAAGGCGTCCCTCT-------GCCTCCGCCGCTCCTCCGCGCACAACGACC
GCCTCCACTCCCCAGTCATGTCCGGGCTCCCCTTCGACAGCGGCGAGTACTTCGCGTCCGTCGGCGTGGGCACCCCGTCC
ACCACCGCGCTGCTCGTCATCGACACCGGGAGCGACCTCATCTGGCTGCAGTGCAAGCCCTGCCGCCGCTGCCACCGCCA
GATGAGCCTGCTCTACGACCCCAAGGGCTCCAGCACCTACCGCCAGATCCCATGCTCGTCGCCGCGGTGCTTCCCTCGCC
AGGGCTGCGACGGCAGCACCGGGGCCTGCGGGTACACCATGGTCTACGGCGACGGCTCCGGCAGCAGGGGCAACCTCGCC
ACCGACAGGCTCGTCTTCTCCAACGACACGTCCGTGGACAGCATCGTCATCGGGTGCGGCCACGACAACGAGGAGCTGTT
CGACTCGTCGGCCGGGGTGCTGGGCGTCGGCCGCGGCGCCGGCTCCCTGGCGACGCAGGTGGCGCCGACCTACGGGCGCT
ACTTCGCCTACTGCCTCGGCGACCGCACGTCCGTCGCGCGGAGCAGCGGCTCCTACCTCGCCTTCGGCCGCACGCCGGAG
CCGCTGTGCACGGCCTTCACCCCGCTGCTGTCCAACCCGCGGCGCCCCAACCTCTACTACGTGAACGTGGCCGGCTTCAG
CGTCGGCGGCAAGCGGGTCACCGGGGGCTTCTCCAGCTGCAGCCTCTCCTTGGACCCGGCGACCGGGCGGGGCGGCCTGG
TGGTGGACTCGGGCACGTCCATATCGCGGCTCCCCAGGGACGCGTACGCGGCGCTGCGCGACGCCTTCGACGCGCGCGCG
GCCGCGGCCGGGATGCGGAGGCTGGCCCGGGGCATGTCAGTGTTCGACGCGTGCTACGAGCTCCGAGGCGCCAGCGTGCC
GGCAGTGACGCTGCACTTCGCCGGCGGGGCGGACGTGGCGCTGCCCCCGGGGAACTACTTCATACCCGAGCAGGGCGGGA
AGTACCACTGCCTGGCGCTGGAGGCGACGGACGACGGGCTCAGCGTGCTCGGCAACGTCCTGCAGCAGGGATTCCGGGTC
GTGTTCGACGTCGAGAAGGAGCGTGTCGGGTTCGCTCCAAATGGCTGCTAAGCTTGATCAACATTTATTTACACGGTTGT
TTAACCTGAAGCACGAGTGTGTACCGCCGCCTTAAATTGTTGTTTTCAGGTGTTACATAGTACTACTACATCAGTGGAGA
AACCATACGCATGGTCGCACTGAATTTCCATAACAGTTGCAAACCCACGCTCACC---ATGCCATTGCTTTGCAATGATC
TCTCAGAACTTCGTCCCGTTCCCCCCATTCGGTCGACAGCTTGAATGAAAGTAACAAAAGCACGTCCACTGTACAT--AA
ATTCCGGATTATAAAATTTGGTCTACTTTGCAAAAACCCGATCCACGACCAAAGCTAGAAGAATTAAAGCTCTTTTTGAG
GGTCTGCCTGAAATGGCCAGTCAACCTGACCGTGTAGAGTTTGCGAATTGCTATGTAATCGCACAACCATGACACGACGA
CATTCCAGGGATAGCCAGATTTTCG-CCGAGTCAACTGATCTTTTGCTGAGTTGCCTCAACATACTGCAGAGCAAGCTTT
TTCACCTTGTCACCCTCCTTGATCAGGAAGTTGGCATTCTTAGCCTCCGAGTGGTGCTTCATAACCTTCTCTGCTGTTTT
AGCAACAGCCCACCTGTATTGCTCCACGGTGATTACGCCGCTCTTGCAAAGTGGCCTGATGTTCTCTTTCACAAACATTT
CAACCTACAAATGTCGAAACAAAGCAGCTCAGAAGGGGCGTACATATGTAACACGCCTCCATGCAACACCTCATAGTTGT
ATTCAGAAATTCAGCCAGAGGGAATA-----------ACACTGTAAAAATAGATGT-CCAGTGGAACATACAAGTGTGTT
GTTACCTTCTTATGTATGGAACTAGATGAAACTGGTGTGCTGTTATTGCCTGGGTCAGGTGCTGGTTTCTTCCAACTGTC
TACACTTTCTGCTGGATGGGTGGATGACTTGTCTCCTTTGGAATGTTTACGATTCAACTCTTGATTGCCACTGGAAGACT
TCTCTTTACCGAGCTCCAGTTTCACTGCT
>chr3A_1
ATCTCGTACGTCGTACATCACAGCTTTATGTTTATGCTTACGTCCGAGGGAGGAAGACGACACACACGGAGCATAAATTA
CTAGCCATACACGGAGTAATTTATATGCATAGCGCGTGGCTAGGTAG---TAGTGCTAGGGTTGCTAGGTTTATTTCCAA
CACGCTTAACCACCAAACAACCAACTTGGCCAGCTGCGCTGTTCCATTTGATGATA-----AAAGTACATCGTGAATCCC
TATTCATTGACTCGCCTCGCTCGTGCAAATACTAT--TGCCACCTGCCGCAGCTGCTGTGATCCGAGTAGTGCAGCGCCT
ACTGT---CTAGGCGCTACACTATACAGTATAGCGTCTAACTCTCAGGCGTTGCACATTGACTTAGCATTTTTCAGGTAG
TCTCGGGTGCGATGCTGGCTAGGCGTGTAGCGCTTGGGAGCTAGGCGCTGCACAGTGTAGTGTGATGCCTAGATGTCGGA
CGCTACATAAAAAGGTCAGTTGAGTGAAATTTTTTCGAACACAGTTTAATTTGTGAAATAAATTTGTCCATAGGTCAGAT
TTGTGGATTTTGCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr7D_1
ATCTCGTACGTTGTACAGCACAACTTTATGTTTATACTTACGCCCGATGGAGGAAGACGACACGCACGGAGCATAAATTA
CTAGCCACACACGGAGTAATTTATATGCATCGCGCGTGGCTAGGTAG---TAGTGCTAGGGTTGCTAGGTTTATTTCCAA
CAG-----------------CCAACTTGGCCAGCTGCGCTGTTCCATTTGATGATA---TAAAAGTACATCGTGAATCCC
TAGGTATTGACTCGCCTCGCTCGTGCAAATACTAT--TGCCACCTGCTGCAGTTGTTGTAATCCGAGTAGTGCAGCGCCT
AGTGT---CTAGCCGTTACACTGTATAGTGTAGCGCCTAGCTCTCAGGCGTTACAGACTGACTAAGCACTTTTCGAGCAG
TCTGGGGTGCGACGTTGGCTAGATGTTTAACGCCTGAGAGCTAAGCGCTGCACAGTGTAGTGTGACGCCTAGATGTCGGG
CGCTACATAAAAGGGTCAGCTGAGTGAATTTTTTTTAAACACAGTTCAGTTTGTGAAATAATTTTGTCCATAGGTCAGAT
TTATGGATTTTGCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr3D_4
---TCGTACGTTGTACAACACAGCTTTATGTTTATGCTTACGTCCGAGGGAGGAAGACGACACGCATGGAGCATAAAATA
CTAGCCACACATGGAGTAGTTTATATCCATCGCGCGTGGCTAGGTAGTACTAGTGCTAGGGTTGCTAGGTTTATTTCCAA
CACGGTTAACCACCAAACAACCAACTTGGCCAGCTGCGCTGTTCCATTTGATGATACTATAAAAGTACATCGTGAATCCC
TAGGCATTGACTCACCTCGCTCGTGCAAATACTAT--TGCCACCTGCTGCAGCTGTTGTAATCCGAGTAGTACAGCGCCT
AGTGT---CTAGGCGCTACACTATC---TGTAGCGCCTAGCTCTCAGGCGTTGCACACTGACTTAGAATTTTTTAGGCAG
TCTGGGGTGCAACGCTGGCTAGGCGTGTAGCGCCTGAGAGCTAGGTGCTGCACAGTGTAGTGTGACGCTTAAATGTCGGG
TGTTACACAAAAGGGTCAGCTGAGTGAAAATTTTTCAAACACAGTTCAGTTTGTGAAATAATTTTGTCAATAGGTTAGAT
TTGTGGATTTTGCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr4B_4
---TCGTACGTCGTACATCACAGCTTTATGTTTATGCTTACGTCCGAGGGAGGAAGACGACACACACGGAGCATAAATTA
CTAGCTATACACGGAGTAATTTATATGCATAGCGCGTGGCTAGGTAGT---AGTGCTAAGGTTGCTAGGTTTATTTCCAA
CACGCTTAACCACCAAACAACCAACTTGGCCAGCTGCGCTGTTCCATTTGATG-----ATAAAAGTACATCGTGAATCCC
TATTCATTGACTCGCCTCGCTCGTGCAAATACTAT--TGCCACCTGCCGCAACTGCTGTGATCTGAGTAGTGCAGCCCCT
ACTGT---CTAGGCGCTACACTGTATAGTGTAGCGCCTAACTCTTAGGCGTTGCACATTGACTTCGCATTTTTCAGGTAG
TCTAGGGTGCGATGCTGGCTAGGCGTGTAGCGTCTGGGAGCTAGGCGCTGCACAGTGTAGTGTGACGCCTAGATGTCGAA
CGCTACATAAAAAGGTCAGTTGAGTGAAATTTTTTCGAACACAGTTTAATTTGTGAAATAAATTTGTCCATAGGTCAGAT
TTGTGGATTTTGCCCCCG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr4D_4
---TCGTACGTCATACATCACAGCTTTATGTTTATGCTTACGCTCGAGGGAGGAAGACGACACACACGGAGCATAAATTA
CTAGCCACACACGGAGTAATTTATATGCACAGCGCGTGGCTAGGTAGT---AGTGCTAGGGTTGCTAGGTTTATTTCCAA
CACGGTTAACC--CAAACAACCAACTTGGCCAGCTGCGCTGTTCCTTTTGATGA---TATAAAAGTACATTGTGAATCCC
TATTCATTGACTCGCCTCCCTCGTGCAAATACTAT--TGCCACCTGCCGCAGCTGCTGTGATCCGAGTAGTGCAGCGCCT
ACTGT---CTAGGCGCTA--------------GCGCCTAGCTCTCAGGCGTTGCACACTGACTTAGCATTTT-TGGGCAG
TTTAGGGTGCGACGCTGGCTAGGCGTGTAGCGCCTGAGAGCTAGGCGCTGCACATTGTAGTGTGACGCCTAGATATCAGG
CACTACATAAAAGGGTCAGCTGAGTGAAATTTTTTCAAACACAGTTCAATTTGTGAAATAATTTTGTCCATAGGTCAGAT
TTGTGGATTTTGCC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr3D_838
CTGAAACACCG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGCAATTAATCAAGAATTTGAACAA
CGCATGCGCAAGAAGCAACTCCATGTAAAAATGGCCATGAAACCGCCACCTGGATCCCGATCCCCTGCTCGTCAGCAGGA
TCCAACATACAGCACTACCTCTCTTTTCGCTTCACTCCATTCTCAAACCTCCATCCTACCATGGCGCAGCATAAGCGTGC
AGTTTCCACCCTCGTTCTTCTCCTCCTCCTCCTGTTCTTCTCGGCGTCGACGAATGCCACACGGCCACCAGCAACGCTCC
GCATCCCCGTCGTCCACCGCGACGCGGTCTTCCCGCCGCCGCCGGGCGCCAGCCGGGGTAGCCTCCTAAGCCGCCGCGCG
GCTGCCGACGCCGCACGCTACGCGGCCCTCAAGGCGTCCCTCT-------GCCTCCGCCGCTCCTCCGCGCACGACGACC
GCCTCCACTCCCCGGTCATGTCCGGGCTCCCCTTCGACAGCGGCGAGTACTTCGCGTCCATCGGCGTGGGCACCCCGTCC
ACCACCGCGCTGCTGGTCATCGACACCGGCAGCGACCTCATCTGGCTCCAGTGCAAGCCCTGCCGCCGCTGCCACCGCCA
GATGAGCCTGCTCTACGACCCCAAGGACTCCAGCACCTACCGCCAGATCCCCTGCTCGTCGCCGCGGTGCTTCCCTCGCC
AGGGCTGCGACAGCAGCACCGGGGCCTGCGGGTACACCATGGTCTACGGCGACGGCTCCGGCAGCAGGGGCAACCTCGCC
ACCGACAGGCTCGTCTTCTCCAACGACACGTCCGTGGACAGCATCGTCATCGGGTGCGGCCACGACAACGAGGAGCTGTT
CGACTCGTCGGCCGGGGTGCTGGGCGTCGGCCGCGGCACCGGCTCCCTGGCGACGCAGGTGGCGCCGACCTACGGGCGCT
ACTTCGCCTACTGCCTCGGCGACCGCACGTCCGTCGCGCGGAGCAGCGCCTCCTACCTCGCCTTCGGCCGCACGCCGGAG
CCGCCGTCCACGGCCTTCACCCCGCTGCTGTCCAACCCGCGGCGCCCCAACCTGTACTACGTGAACATGGCCGGGTTCAG
CGTCGGCGGCGAGCGTGTCGCCGGCGGGTTCTGCAGCTCCGGCCTCTGGCTCGACCCGGCGAACGGGCGGGGCGGCGTGG
TGGTGGACTCGGGCACGTCCATATCGCGGCTCCCCAGGGACGCGTACGCGGCGCTGCGCGACGCCTTCGACGCGCGCGCG
GCCGCGGCCGGGATGCGGAGGCTGGCCCGGGGCATCTCGGTGTTCGACGCGTGCTACGAGCTCCGAGGCGCCAGCGTGCC
GGCAGTGACGCTGCACTTTGCCGGCGGGGCGGACGTGGCGCTGCCCCCGGAGAACTACTTCATACCCGAGCAGGGCGGGA
GGTACCACTGCCTGGCGCTGGAGGCGACGGACGACGGGCTCAGCGTGGTCGGCAACGTCCTGCAGCAGGGGTTCCGGGTC
GTGTTTGACGTCGAGAAGGAGCGTGTCGGGTTCGCGCCAAATGGCTGCTAAGCTTGATCAACATTTATTTACACGGTTGT
TTAACCTGAAGCACGAGTGTGTACTGCAGCCATAAATTGTTGTTTTCAGGTGTTACATATTAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr3A_845
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CACCCAGCAATTAATCAAGAATTTGAACAA
CGCATGCGCAAGAAGAAACTCCATGTAAAAATGGCCATGAAACGGCCACCCGGACCCTGATCCACTGCTCGTCAGAAGGA
TCCAACATACAGTGCTACCTCTCTTTTCGCTTCACTCCATTCTCAAACC-----------ATGGCGGAGCACAAGCGTAC
AGTTTCCACCCTCGTTCTCC------TCCTCCTCTTCTTCTCGGCGCCGACGAATGCCACACGGCCACCAGCAACGCTCC
GCATCCCCGTCGTCCACCGCGACGCGGTCTTCCCGCCGCCGCCGGGCGCCAGCCGTGGTAGCCTCCTAAGCCGCCGCGCG
GCTGCCGACGCCGCGCGCTACGCCTCCCTCAAGGCGTCCCTCGGGCCTCGGCCTCCGCTCCTCCTCCGCGCACGACGACC
GCCTCCACTCCCCGGTCATGTCCGGGCTCCCCTTCGACAGCGGCGAGTACTTCGCGTCCGTCGGCGTGGGCACCCCGTCC
ACCAGCGAGCTGCTGGTCATCGACACCGGGAGCGACCTCATCTGGCTCCAGTGCAAACCCTGCCGCCGCTGCCACCGCCA
GATGAGCCCGCTCTACGACCCCAAGGGCTCCAGCACCTACCGCCAGATCCCCTGCTCGTCGCCGCGGTGCTTCCCTCGCC
ATGGCTGCGACACCAGCACCGGGGCCTGCGGGTACGCCATGGTCTACGGCGACGGCTCCGGCAGCAGGGGCAACCTCGCC
ACCGACAGGCTCGTCTTCTCCAACGACACGTCCGTGGACAGCGTCGTCATCGGGTGCGGCCACGACAACGCGGAGCTGTT
CGACTCGTCGGCCGGGGTGCTGGGCGTCGGCCGCGGCGCCGGCTCCCTGGCGACGCAGGTGGCGCCGACCTACGGGCGCT
ACTTCGCCTACTGCCTCGGCGACCGCACGTCCGTCGCGCGGAGCAGCGCCTCGTACCTCGCCTTCGGCCGCACGCCGGAG
CCGCCGTCCACGGCCTTCACCCCGCTGCTGTCCAACCCGCGGCGCCCCAACCTGTACTACGTGAACATGGCCGGCTTCAG
CGTCGGCGGCGAGCGTGTCGCCGGCGGGTTCTGCAGCTCCAGCCTCTGGCTCGACCCGGCGACCGGGCGGGGCGGCGTGG
TGGTGGACTCGGGCACGTCCATATCGCGGCTCCCCAGGGATGTGTACGCGGCGCTGCGCGACGCCTTCGACGCGCGCGCG
GCCGCGGCCGGGATGCGGAGGCTGGCGCGGGGCATCTCGGTGTTCGACGCGTGCTACGAGCTCCGAGGCGCCAGCGTGCC
GGCGGTGGTGCTGCACTTCGCTGGCGGCGCGGACGTAGCGCTGCCCCCGGAGAACTACTTCATACCCGAGCAGGGCGGGA
AGTACCACTGCCTGGCGCTGGAGGCGACGGACGACGGGCTCACCGTGCTCGGCAACGTCCTGCAGCAGGGATTCCGGGTC
GTGTTCGATGTCGAGAAAGAACGTGTCGGGTTCGCGCCAAATGGCTGCTAAGCTTGATCAACATTTATTTACACGGTTGT
TTAACCTGAAGCATGTGTGTGTACTGCAGCCATAAATTGTTGTTTTCACGTGTTACA------TAGTACAACACGGGAGA
AAACATACGCACGGCCGCACTGAATTTCCGTAGCAGTTGCAAACCCACGCTCACTAGTATGTCATTGCTTTGCAATGATC
TCTCTGAACTGGGTCCCTATTCCCCCATTCGGTCGACAGCTTGAATGAAAGTAACAAAAGCACGTCC-CCTGTACATAAA
ACTGCCGATGATAAAATTTGTTCTACTTTGCGAAAACCCGATCCACGACCAAAGTTATAAGAATTAAAGCTC-TTTTGAG
GGTCTGCCTGAAATGGCCGGTCAACCTGACCGTGTAGAGTTTGCGAATTGCTGTGTAATCGCACAACCACGACACGACGA
CATTCCAGTGATAGCCAGATTTTGGCCCGAGTCAACTGATCTTTTGCTGAGCCGCTTCAACATACTGCAGAGCAAGCTTT
TTGACCTTGTCACCCTCCTTGATCAGGAAGTTGGCATTCTTAGCCTCCGAGTGGTGCTTCATAACCTTCTCTGCCGTTTT
AGCAACAGCCCACCTGTATTGCTCGACGGTGATTACGCCGCTCTTGCAAAGTGGCCTGATGTTCTCTTTCACAAACATTT
CAACCTAGAAAGGGTGAAACAAAGCAG-----------------------------------------------------
---------TTCAGCCAGACATGTAAAAATAGATAGTACACTGTTAAAATAGATGC-CCAGTGGAACATACAAGTGCGTT
GTTACCTTCTTATGTACGGAACTAGATGAATCTGATGCGCTGTTATTGCCTGGATCAGGTGCTGGTTTCTTCAAACTGTC
TACACTTTCTGCTGGATGGGTAGATGACTTGTCTGCTTTGGAATGTTTACGATTCAACTCTTGATTGCCACTGGAAGACT
TCTCTTTACCGGGCTCCAGTTTCACTGCT
>chr3D_2547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCGGTCGACAGCTTGAATGAACGTAACAAAAGCACGTCC-CTGTACAT--AA
ACTCCCGATGATAAAATTCGGTCTACTTTGCAAAAACC-GATCCACGACCAAAGTTATAAGAATTAAAGCTC-TTTTGAG
GGTCTGCCTGAAATGGCCAGTCAACCTGACCGTGTAGAGTTTGCGAATTGCTATGTAATCGCACAACCATGACACGACGA
CATTCCAGTGATAGCCAGATTTTGGCCCGAGTCAACTGATCTTTTGCTGGGCCGCTTCAACATACTGCAGAGCAAGCTTT
TTCACCTTGTCACCCTCCTTGATCAGGAAGTTGGCATTCTTAGCCTCCGAGTGGTGCTTCATAACTTTTTCTGCTGTTTT
GGCGACAGCCCACCTGTATTGCTCGACGGTGATTACGCCGCTCTTGCAAAGTGGCCTGATGTTCTCTTTCACAAACATTT
CAACCTACAAAGGGTGAAACAAAGCAG-----------------------------------------------------
---------TTCAGCCGGACATGTAAAAATAGATAGTACACTGTAAACATAGATGTTCCGGTGGAATATACAAGTGCGTT
GTTACCTTCTTATGTACAGAACTAGATGAATCTGATGCGCTGTTATTGCCTGGGTCAG---CTGGTTTCTTCAAACTGTC
TACACTTTCTGCTGGATGGGTGGATAACTTGTTTCCTTTGGAATGTTTCCGATTCAACTCTTGATTCCCACTGGAAGACT
TCTCTTTACCGGGCTCCAGTTTCACTGCT
>SNPs
--S-----S---------S----------------------------------------------S--------------
--------------------------------SS---------------------S------------------------
------S--------------------------------------------------------------------S----
S----------------S-----------------SS------------SS-----------------------------
-----SSS----------S-----------------S-----S-------------------------------------
----S-S------S----------S---------------S---------------S-----------------S-----
-------------S-------S--SS----SSSS---------------------------------------S------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---------------------
--S--------------------------------------------------S----------------S---------
--------------------------------------------------------------------------------
-------------------------------SS-----------------------------------------------
------------------------------------------------------------S-------------------
-----------S---S--------S------------------------------------------------S------
-------------S------------------------------------------------------------------
--------------S--------------------------------S--------------------------------
---------------------------------------------------S----------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
----S--S---------------------------------------------S------------S-------------
----------S----S---S----S--S----S-----S--------SSS-S------------------------S---
--------------------------------------------------------------------------------
-----------------------------------S--S-----------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------S--S---S---------------------------S-----S----S--SS-----
--S--------S--S--------------S--S---------------------S------S------------------
----S-----SS-----SS-S----------------------------------------------S------------
-S---S---S--------------------------------------------S--S--------------S-------
--------------------------------------------------------------------------------
--------S--------------S---------------------------SS--S------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------S-SS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS----------SSSSSS---------------------------------------------------S---
----------------S-------------S---S--S----------------------------------S-------
--------------------------------------------------------------------------------
-----------S-----------------
>forward_818
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
CGAAGGAGTAGTGCAAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGATAGCCAGATTTTCGCCG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
