>input_sequence_54265
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----------------------ATGGTGGTGGAGGGATACGAAGCCGACAAGAACATCCAGATATGGAAGGTGAAGAAGC
TGATCAAGGGGCTGGACGCGGCGAGGGGCAACGGCACGAGCATGATCTCGCTCATCATACCGCCGCGCGACCAGGTGTCC
CGCGTCGCCAAGATGCTGGGCGACGAGTACGGGACCGCCTCCAACATCAAGAGCCGGGTGAACCGCCAGTCCGTGCTGGC
CGCCATAACCTCCGCCCAGCAGAGGCCCAAGCTCTACAGCCGGGTGCCCCCCAACGGCCTCGTGCTCTACACGGGCACCG
TCGTCACCGACGACGGCAAGGAGAAGAAGGTCACCTTCGACTTCGAGCCCTTCCGGCCCATCAACGCGTCGCTCTACCTC
TGCGATAACAAGTTCCACACCGAGCCGCTGAACGAGCTCCTCGAGTCCGACGACAGGTTCGGCTTCATCGCCATGGACGG
CAACGGCACGCTCTACGGCACGCTGAGCGGCAACAGCCGGGAGGTGGTGTACAAGTTCAGCGTGGATCTGCCCAAGAAGC
ACGGGCGGGGAGGGCAGTCGGCGCTCCGGTTCGCGCGCCTGCGCATGGAGAAGCGGCACAACTACCTGCGCAAGGCGGCC
GAGCTGGCCACGCACTTCTTCACCAACCCCGCCACCAACCAGCCCAACGTGGTCGGGCTCATCCTGGCCGGCTCCGCCGA
TTTCAAGACCGAGCTGGGCAAGTCCGAGATGTTCGACCAGCGGCTCCAGGCCAAGATAATCAAGTCGGTCGACGTGTCGT
ACGGCGGGGAGAGCGGCTTCAACCAGGCCATTGAGATGTCTGTGGAGGTCCTCTCCGAGGTCAAGTTCGTCCAGGAGAAG
AAGCTCCTTCGCAAGTACTTCGAGGAGATAAGCCAGGACACCGGGAAGTACGTCCTGGGCGTGCAGGACACCATGGCGGC
CCTCGAGATGGGCGCGGTCCACACGCTGATCGTGTGGGAGAACCTCGACGTCAGGCGGTACGAGCTGAAGAACTCCGCCA
CGGGGGAGACGGTGGTGAAGTACATCAACGGCGGCCAGGAGGCGGACCAGAGCAACCTCGGTGTCGACGAGGCGGCGTGC
GGGGAGCTGGACGTCGTCGACAGGGTGCTGCTGCTGGAGTGGTTCGCCGAGAACTACCAGCAATACGGCTGCAAGCTGGA
GTTCGTCACCAACAGGTCCCAGGAAGGATCGCAGTTCTGCCGGGGCTTCGGCGGCATCGGCGGGATCCTCCGCTACCCGG
CGGACGTCGCCGCCT---ACAACGACGACGACGACGACGACATGCTGGATGACGACGTCTATGAAGGCCTCGAATAG---
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G235000
GAAGATATCATTGTTGTTGACGTGTTTAGGGGTTGTAAAGAAATTGGAAAAAAGAAAGACCTGACTGCAAATTGGAACCG
GGAGGCGCAGTCCGGATTTTGCTGGACTGAAAGGAGATGAATTTGATTTCTGTTCGAACAAGAAAAGAAAAGAAAGGATG
AGTGTATGCGCGTGTATATGAGCGCTTACGTCTATACTAATATTAAAAAAAAGATGAATTCGATTCCTATGGACAAGGCT
TGGTGGGCGCACGCGTCTCGCCCGTGCGGTGGAAGCGTGCCG--------CATCATGTGCCAGGCCCCGGGGCTTCCAGA
ACGCTTTTGGCACCTCAACCATTCCGCGGCCTACCCCGCCG---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TCGGAAATATCTTGGGGGCCATGACA
T---------------------GTGAAGATGCGCCAGGTGCTGCGTGTTGCTTGGGCGCCGCTGTACCACGCGGGGACAC
TTGGCTAAGCCTGAGCAGAGCTGGTTGGAAGGAAAGTCTGAGCAGAGCTGGTTGGAAGGAAAGTCGAATAAGAAACCAGA
CGAAGTCATTCCTTTCTTTGGAGACCTGGCTACCGCTAGGTAGGTAGCCAG---CCGGAAGGCAACCGTTTGGTGCCGCC
CTGTGCGTTGATGCTCCATTTCTCTTCCTCTCATTCTGATGATCACGCGGATGCCCGGCGC----GTGGCGCGTTGCCAT
GCGTACGCGTGTCAGCAGAGCATCCTAAAAA------CAACGGCGTGCTTTCGGGAGAGTTCGCAACCATCCCCGCCACC
TCCCCCTTCTCGTCT----------TCCGTCTAAAAAGTGCAGGCCAGCACCCGTCTCCTGAGCACACATCTCACCACGC
CACAAACACCAAAGAGAGGTGTACTACGAGGGAGTGAGAGGCGCCCGGCTCGCCTGCGTCCGTCTCCACTTCTCGCGAGC
CCGGCGTCACCCGCCGCCGGGCACGCACCACGCTCAACGCCAAAG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AAAATAGTGTAGGTCGTGTAGGCGAAGGCCGACCTGCA
AACTAAACACTAGTCGATCAAGATGGTGGTGGAGGGATACGAAGCCGACAAGAACATCCAGATATGGAAGGTGAAGAAGC
TGATCAAGGGGCTGGACGCGGCGAGGGGCAACGGCACGAGCATGATCTCGCTCATCATACCGCCGCGCGACCAGGTGTCC
CGCGTCGCCAAGATGCTGGGCGACGAGTACGGGACCGCCTCCAACATCAAGAGCCGGGTGAACCGCCAGTCCGTGCTGGC
CGCCATAACCTCCGCCCAGCAGAGGCCCAAGCTCTACAGCCGGGTGCCCCCCAACGGCCTCGTGCTCTACACGGGCACCG
TCGTCACCGACGACGGCAAGGAGAAGAAGGTCACCTTCGACTTCGAGCCCTTCCGGCCCATCAACGCGTCGCTCTACCTC
TGCGATAACAAGTTCCACACCGAGCCGCTGAACGAGCTCCTCGAGTCCGACGACAGGTTCGGCTTCATCGCCATGGACGG
CAACGGCACGCTCTACGGCACGCTGAGCGGCAACAGCCGGGAGGTGGTGTACAAGTTCAGCGTGGATCTGCCCAAGAAGC
ACGGGCGGGGAGGGCAGTCGGCGCTCCGGTTCGCGCGCCTGCGCATGGAGAAGCGGCACAACTACCTGCGCAAGGCGGCC
GAGCTGGCCACGCACTTCTTCACCAACCCCGCCACCAACCAGCCCAACGTGGTCGGGCTCATCCTGGCCGGCTCCGCCGA
TTTCAAGACCGAGCTGGGCAAGTCCGAGATGTTCGACCAGCGGCTCCAGGCCAAGATAATCAAGTCGGTCGACGTGTCGT
ACGGCGGGGAGAGCGGCTTCAACCAGGCCATTGAGATGTCTGTGGAGGTCCTCTCCGAGGTCAAGTTCGTCCAGGAGAAG
AAGCTCCTTCGCAAGTACTTCGAGGAGATAAGCCAGGACACCGGGAAGTACGTCCTGGGCGTGCAGGACACCATGGCGGC
CCTCGAGATGGGCGCGGTCCACACGCTGATCGTGTGGGAGAACCTCGACGTCAGGCGGTACGAGCTGAAGAACTCCGCCA
CGGGGGAGACGGTGGTGAAGTACATCAACGGCGGCCAGGAGGCGGACCAGAGCAACCTCGGTGTCGACGAGGCGGCGTGC
GGGGAGCTGGACGTCGTCGACAGGGTGCTGCTGCTGGAGTGGTTCGCCGAGAACTACCAGCAATACGGCTGCAAGCTGGA
GTTCGTCACCAACAGGTCCCAGGAAGGATCGCAGTTCTGCCGGGGCTTCGGCGGCATCGGCGGGATCCTCCGCTACCCGG
CGGACGTCGCCGCCT---ACAACGACGACGACGACGACGACATGCTGGATGACGACGTCTATGAAGGCCTCGAATAGCAA
TCAACTGAAGCTTCACTGCACACGGTCTGGGAGGAGCCTGCGCTGGCCCCGACCGCGCCGCCGGGACGAGACCCTGCTGA
AACATCCAAACGATCGGTGCAAGGGAAACGAGGTAT--------GGTCCTGAAACTGGCCATGGTTGATTCGGTTTCTG-
-TGTC--------------------TTTCTTCTGATCTTTTTGACTGACCTTGATCAACATTCACAACGTCTGCTTTGAG
CAGGAGGTGGGACAGAAGAAAGGATCTCAGCAATTATAGTTCGGACC--TTGAGCAAAGCACGATGATGGCGTTGATGGT
TTGGAGTTG-AAGGTCTCTTCCTCTCTGGATCCATCCCTTCAAATTTGGTTATGCTACTAAGCAGCCGTGGCTGCCTTCT
CTTGCTGCATCAGAGAATATGCTTATTAGAGTCGTATTAGTTGCGAGTGTGAGAGTGGTGTTCCTTATAATCTACTCCTG
AGTCGCCTTATGAGCTTA-TATGCTACTACAACAACTGCTTGAAATAATGTTGTGTAT-TATTGTGTTCGATTTTATATG
TGAGATTTATTGCTATGGTAAGATACTACTTATGCTATCCTCACTATTGCCAGCCTTAAGGCATTGTTTCTGACCAATCC
CCTATATCCCAAGGGTCTGTCTAGGGCTCATCTAGATGTGACATAACAAAATCACATCTAAGTGTGATGTCAGCGCCACC
TCATTGTTTGTTTGTTTGATTTTGATTTGTCAAAGCCCAAAACAAACAAACGAGCTCGCCCGCATCTCCGCCTGGTTGGG
CCGGCCAATATGTCCACCCGCGCCTACATGCTGGTAGGCTACCTACTAGCACAAAGCTAGCGATTAGTGCTAAAAAAACC
CAAGCTAACGATCAGAATTTATATAAAGCTAGCGATCCAAATTGTGTCACTCGAAGCTAACGATCAGAATTTCTTTTGGA
GGAAAAGCTAGCGATCAGGTGTATTAGTGAAAATAAAGTAGCGCTACCACTGATTTGTTTTTTTTCATCATC
>chr1B_1
GAAGATATCGTCGCCGTTGATGTGTTTAGGGA-TGTAAGGAAATTAG-AAAAAGAAAGACCTGACTGCAAATTGGAACCG
GGAGGCGAACTCTGTATTTTGCTGGACC----GGAGATGAATTCGATTTTTGTTCGAACAAGGAAAGAAGAAAAG-----
----------------------------------------------AAAGAAGATGAATTCGATTCCTATGGAGAAGGCT
TGGTGGGCGCACGCGCCTCGACCGCGCGGTGGAAGCGTGCCG--------CATCATGTGCCAGGCCCCGGGGCTTCCAGA
ACGCTTTTGGCACCTCCATTATTCCGCGACGGTACGCCGCCGTCGACATAGACCGGGAAGAACCGACGTCCCCGG-----
-GATAGCTACCTTGGACCGCTCCCTGGCCGTTCGTGCCTCTCCAGATGGCAGG--GGTGGACGGCGCGTCGTCGCAGAAA
GCATCGTAGTACAACTGCTGTCTTGCTCGGGTGGCGA-----------------TCGGAAATATCTCGGGGGGTCGTCAG
GTCAGGACTCAAAAGGCGGCACGTGAAGATGCGCCAGGTGCTGCGTGTTGCTTGGGCGCCGCTGTAGGACGCGCGGACAC
TTGGCTAAGCCTGAGCGGAGCTGGTTGGAAGAAACCAGACGA--------------------------------------
-------ATTCTTTCCTTTGGAGACCTGGCTT------GGTAGGTAGCCAGAAC-CGGAAGGCACCCGTTTG--------
--GTGCGTTGATGTTCCGTTTCTCTTCCTCTCATTCT---GATCACGCGGATGCCCGGCGGGCGGGTGGCACGTTGCCAT
GCGTACGCGTGGCAGCACAGTATCTTAAAAA------CAATGGCGTGCTTTCGCGAGAGTTCGCAACCAT---------C
TCCGCCTTCTCGTCT----------TCCGTCTAAAAAGCACCGGTCTCCTTCCTG-TCCTGAGCACAC----CACCACGC
CACAACACCAAAGAGGAAGCGTAC-------GAGGGAGAGGCGCTCGGCTCGCCTGCGTCTGTCTCCGCTTCTCGCGAGC
CCGGCGTCACCCGCCGCCGGGCACGCACCACGCCCACGCCCACGCCCACGCAGGTACTCCTCGCCCTTTCTGCCTGTCTT
CTCCTCTTATATGTCTTATTAATCATAAGGTTGCTATGAAGAAGACTATGATCGAGCTGAGCATGCATGATCTGTCTGCG
GCTGCAAACAGGCCGACGGCTAAATCTTGATCTATGTTGCTTAAGGTAGGAAATGTAGATTTTTACTGATCCTATCCATG
GTATCGTGTTAGATCTGCTTTGCCTGACGGGTTTGGGAAGCTAGTGCATCATTTCTGGTCAGTTGGTCATCTGACCATTT
TGTCAGTCTCATCCTGTGCACATCACCAAGATAGTATCCGATTTTTGTTATTATTATTTGCCTCTCGTTTAAGAGTGGGA
AGATATATTGCATTTGCACATGATTACGGTAGTGTCTAGTGTGTGTTCCTTCAGATCAATTCAAGTGGTCTTTACATGCT
TACTATTCTGGAATCTGGGCTAATTAACCTGCACCTTGAACTAAAATTGTGTAG---GTATAGGTGAAGGCTGACCTGCA
AACACTACTAG------TCAAGATGGTGGTGGAGGGATACGAAACGGACAAGAACATCGAGATATGGAAGGTGAAGAAGC
TGATCAAGGGGCTGGACGCGGCGAGGGGCAACGGCACGAGCATGATCTCGCTCATCATGCCGCCGCGCGACCAGGTCTCC
CGGGTGGCCAAGATGCTGGGCGACGAGTACGGGACCGCCTCCAACATCAAGAGCCGGGTGAACCGCCAGTCCGTGCTGGC
CGCCATAACCTCTGCCCAGCAGAGGCTCAAGCTCTACAACCGGGTGCCCCCCAACGGCCTCGTGCTCTACACCGGCACCG
TCGTCACCGACGACGGCAAGGAGAAGAAGGTCACCTTCGACTTCGAGCCCTTCCGGCCCATCAACGCGTCGCTCTACCTC
TGCGACAACAAGTTCCACACCGAGGCGCTGAACGAGCTCCTCGAGTCCGACGACAAGTTCGGCTTCATCATCATGGACGG
CAACGGCACGCTCTACGGCACGCTGAGCGGCAACAGCAGGGAGGTCGTGTACAAGTTCAGCGTGGACCTGCCCAAGAAGC
ACGGGCGGGGAGGGCAGTCCGCGCTCCGCTTCGCGCGCCTGCGCATGGAGAAGCGGCACAACTACCTGCGCAAGGCGGCC
GAGCTCGCCACGCACTTCTTCATCAACCCTGCCACCAACCAGCCCAACGTCGTCGGGCTCATCCTGGCCGGCTCCGCCGA
TTTCAAGACCGAGCTGGGCAAGTCCGAGATGTTCGATCAGCGGCTGCAGGCCAAGATAATCAAGTCGGTCGACGTGTCGT
ACGGCGGCGAGAGCGGCTTCAACCAGGCCATTGAGATGTCTGTGGAGGTCCTCTCCGAGGTCAAGTTCGTCCAGGAGAAG
AAGCTCCTTGGGAAGTACTTCGAGGAGATAAGCCAGGACACCGGGAAGTACGTCCTCGGCGTGCAGGACACCATGGCGGC
CCTCGAGATGGGCGCGGTCCACACGCTGATCGTGTGGGAGAACCTCGACGTCAGGCGGTACGAGCTGAAGAACTCCGCCA
CGGGGGAGACGATGGTGAAGTACCTCAACGGCGGCCAGGAGGCGGACCAGAGCAACTTC---GTCGACGAGGCGACGTGC
GGGGAGCTGGATGTTGTTGACAGGGTGCTGCTGCTGGAGTGGTTCGCCGAGAACTACCAGCAGTACGGCTGCAAGCTGGA
GTTCGTCACCAACAGGTCCCAGGAAGGATCGCAGTTCTGCCGGGGCTTCGGCGGCATCGGCGGGATCCTCCGCTACCCGG
CGGACGTCGCCGCCT---ACGACGAC------GAAGACGACATGCTGGATGACGACGTCTATGAAGGCCTCGAATAGCAA
TCAACTGAAGCTTCAGTGCACACGGTCCGGGAGGAGCCTGCGCTGGCCCCGACCGCGCCG---GGACGAGACC---CTGA
AACATCCAAACGATCGGTGCAAGGAAAACAAGGTAT--------GGGCATGAAACTGGCCATGGTTGATTCAGTTTCTGT
TTGTC--------------------TCTCTTCTGATCTTTTTGACTGACCTTGATCAACATTCACAACGTCTGCTTTGAG
CAGGAGGTGGGACAGAACAGAGGATCTAAGCAATTACAGTCCGGATC--TTGAGCAAGGCACAATGATGGCGTTGATGCT
TTGGAGTTG-AAGGTCGCTTCCTCTCTGGATCCATCCCTGGAAATTTGGTGATGCTACTAAGCAGCCGTGGCTGCCTTCT
CTTGCTGCATCAGAGA--ATGCTTATTAGAGTCGTATTAGTTGCGAGTGAGTCACAGACTCCCAGTGGTGT----TCCTG
AGTCGCCTTATTATGAGCTTATGCTACTACAACAACTGCTTGAAATAATGTTGTATATGTATTGTGTTCGATTTTATATG
TGAGATTTATTGCTATGGTAAGA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1D_19
------------------GATGTGTTTATGGATTGTAAAGAAATTGG-AAAAGGAAAGACCTGACTGCAAATTGGAACCG
GGAGGCGAACTCCGGATTTTGCTGGACCGGAAGGAGATGAATTCGATTTT-GTTCGAACAAGAAAAGAATAAAAG-----
----------------------------------------------AAAGAAGCTGAATTCGGTTCCTCTATG-------
--------------GCGTCGACCGCGCGGTGGGAGCGTGCCGCATGCCCGCATCATGTGCCAGGCCCCGGGGCTTCCAGA
ACGCTTTTGGTACCTCCGCCATTCCGCGACGGTACGCCGCCGTCGACCTAGACCGGGCAGACCGACGACGTCCTTGGCTG
TGATAGCTACCTTGGAGGGCTCCCTGGCCGTTCGTGCCTGCCTATCCAGATGCCTGGTGGACGCCGTGTCGTCGCAGAAA
GCATCCTAGTACAACTGCTGTCTTGCTCGGGTGGCGACGTTGCGGTTGCGCGGCTCGAAAATATCTCGGGGGCCATGACA
T---------------------GTGAAGATGCGCCAGGTGCTGCGTGTTGCTTGGGCGGGGCTGTACGACGCGTGGACAC
TTGGCTGAGCCTGAGCAGAGCTGGTTGGAAGAAACCAAACGA--------------------------------------
-------ATTCTTTTCTTTGGAGACCTGGCTT------GGTTGGTAGCCGGAACCCGGAAGGCACCCGCTTGGTGCGGCC
CTGTGCGTTGATGTTCCATTTCTCTTCCTCTCATTCTCATGATCACGCGGATGCCCGGTGAGCGGGTGGCGCGTTGCCAT
GCGTACGCGTGGCAGCAGAGCATCGTAAAAACAAGAACAATGGCGTGCTTTCGGGAGAGTTCGCAACCAT---------C
TCCGCCACCTCCCCCTTCTCCTCCGTCCGTCTAAAAGGCGCAGGCCGGCACCAGTCTCCTGGGCACATCTATCCCACCAG
T-------CCAAAGAGAGGCGTACTACGAGGGAGGGAGAGGCGCTCGGCTCGCCTGCGTGTGTCTCCACTTCTCGCGAGC
CCGGCGTCACCCGCCGCCGGGCACGCACCACGCTCAACACCAAAG-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------AAAATAGTGTAGGTCGTGTAGGCGAGGGCTAACCTGCA
AATTAAACACTAGGCGATCAAGATGGTGGTGGAGGGACACGAAACCGACAAGAGCATCGAGATATGGAAGGTGAAGAAGC
TGATCAAGGGGCTGGACGCGGCGAGGGGCAACGGAACGAGCATGATCTCGCTCATCATGCCGCCGCGCGACCAGGTGTCC
CGGGTGGCCAAGATGCTGGGCGACGAGTACGGGACCGCCTCCAACATCAAGAGCCGGGTGAACCGCCAGTCCGTGCTGGC
CGCCATAACCTCCGCCCAGCAGAGGCTCAAGCTCTACAGCCGGGTGCCCCCCAACGGGCTCGTGCTCTACACCGGCACCG
TCGTCACCGACGACGGCAAGGAGAAGAAGGTCACCTTCGACTTCGAGCCCTTCCGTCCCATCAACGCGTCGCTCTACCTC
TGCGACAACAAGTTCCACACCGAGGCACTGAGCGAGCTCCTCGAGTCCGACGACAGGTTCGGCTTCATCGTCATGGACGG
CAACGGGACGCTCTACGGCACGCTGAGCGGCAGCAGCAGGGAGGTGGTGTACAAGTTCAGCGTGGACCTGCCCAAGAAGC
ACGGGCGGGGAGGGCAGTCCGCGCTCCGCTTCGCCCGCCTGCGCATGGAGAAGCGGCACAACTACCTGCGCAAGGCGGCC
GAGCTCGCCACGCACTTCTTCATCAACCCTGCCACCAACCAGCCCAACGTCGTCGGGCTCATCCTGGCCGGCTCCGCCGA
TTTCAAGACCGAGCTGGGCAAGTCCGAGATGTTCGACCAGCGGCTGCAGGCCAAGATAATCAAGTCGGTCGACGTGTCGT
ACGGCGGGGAGAGCGGCTTCAACCAGGCCATTGAGATGTCTGTGGAGGTCCTGTCCGAGGTCAAGTTCGTCCAGGAGAAG
AAGCTCCTTGGGAAGTACTTCGAGGAGATCAGCCAGGACACCGGGAAGTACGTCCTCGGCGTGCAGGACACCATGGCGGC
CCTCGAGATGGGCGCGGTCCACACGCTGATCGTGTGGGAGAACCTCGACGTCAGGCGGTACGAGCTGAAGAACTCCGCCA
CGGGAGAGACGGTGGTGAAGTACCTCAACGGCGGCCAGGAGGCGGACCAGAGCAACTTC---GTCGACGAGGCGACGTGC
GGGGAGCTGGATGTTGTTGACAGGGTGCTGCTGCTGGAGTGGTTCGCCGAGAACTACCAGCAGTACGGCTGCAAGCTGGA
GTTCGTCACCAACAGGTCCCAGGAAGGGTCGCAGTTCTGCCGGGGCTTCGGCGGCATCGGCGGGATCCTCCGCTACCCGG
CGGACGTCGCCGCCTATGACGACGAC------GACGACGACATGCTGGATGACGACGTCTATGAAGACCTCGAATAGCAA
TCAACTGAAGCTTCAGTGCACACGGTCCGGGAGGAGCCTGTGCTGGCCACGACCGCGCCG---GGACGAGACC---CTGA
AACATCCAAACGATCGGTGCAGGGGAAACAAGGTATGGTCCTCAGGTCCTGAAACTGACCATGGTTGATTCAGTTTCTGT
TTGTTCTGCTTGATGTTGGATTCTTTCTTCTCTGTTCTTTCTGACTGACCTTAATC-ACATTCACAACGTGTGCTTTGAG
CAGGAGGTGG---AGAGAAGAGGATCTAAGCAATTGCGCAATCCAGATGTTGAGCCAGGCATGATGATAGCGTCGATGCT
TTGGGGTTGAAAGGTTTCTTCCTCTCTGGATCCGTCCCTGGAAATTTGGTGATGCTACCAAGCAGCCGTTGCTGCCTTCT
CTTGGTGCATCAGAGA--ATCCTTATT--AGTCCTATTAGTTGCGAGTCTGAG---------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>SNPs
---------S-S-SS-----S----------S---------------S--------------------------------
-------S-S-----------------S-S-------------S-----S-------------------S-S--SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------------S------
---------------S----S---S-------------------------------------------------------
----------------S-----------S-SSSS-S-SS-S---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-------------------------------------------------------------------S-----S------
-------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----S-------------------SSSSSSS--------------------------S-----------S---
-------------S-----------------------S----------------------S-------------------
-----------S------------S---------------S-----------------------------SSSSSSSSS-
---S----------------------------------S-------S---------------------S-S---------
-----SSS-----------S--------------S---------S---------------S-------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------S-----------------------------S--------------S---------------------
----------------------------------------------------------S---------------------
--S--S--------------------------------------------------------------------------
--------------------------S---------------------------------------------S-------
--------------------------------------------------------------------------------
-----S------------------S---------------------------------------------S---------
-------------------------------------S----------------------------S-------------
-------------------S--------S---------------------------------------------------
-----S----------------S------S--------------------S-----------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------S-S--------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------S--SSS------------S-----
-----------S--S--S--------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------S-----SSSSSS------------------------------------------------
---------------S-----------S--------------------------------SSS----------SSS----
-----------------------------S-----------------------------------------S--------
--------------------------S-----------------------------------------------------
-----------------S-S-------S--------S---S----S-----------S--------------------S-
---------------------------------------SS---------S-----------------------------
----------------SS------------------------------------SS-SSSSS-SS-SSSS-SSSS-----
-----------S-SSSSS------------------------------------S-------------------------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_697
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CTGAGCAGAGCTGGTTGGAA-----------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_2198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------CGGGAGGTGGTGTACAAGTT-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_755
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CTTTGGAGACCTGGCTACCG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_2863
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------ATACGGCTGCAAGCTGGA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1046
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACATCTCACCACGC
CACAAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_3338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------AGCACGATGATGGCGTTGAT---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
