>input_sequence_54214
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-------------ATGCCCCCGCGTCTCCTGCTCCTGCTCCTCCTCCTGGCCGCCGCCCTCCCGCCGCCGGCCGCGTCCC
GGCTCGGCGACCACGAGCCCCCTCCTCCGCCCCCGCACCCGCGCGCCCGCCAGCACCGGGCCCAGAGCGGCGGCGGC---
ACCGGGGGCGCGAGCCGCGTGCTCACCACCGCGCTCGTCGCCGCCGCGTCGCTCCTGGCCGTGCTCCTGCTCTACCTCTG
CGTCGCCATCGCCGTGCGCCGCATCCGGGGGAAGGGGGAGGGCGGC------CGCGCGTCGCGGCAGCAGGCCTCGCAGT
CCTCCCGCGCGGCCGCGTTCCTCCGCCGCCACGGCCTGCACCACAGCCGCCCGGCCTTCACCTACGAGCAGCTCCGCGCC
GCCACGGCCGGGTTCGACGCCGCGCGCAAGCTCGGGGACGGCGGGTTCGGGACGGTCTACCTCGCGTACCTCCCGCCCGC
GGGCCGCCCCGCCGCCGTCAAGCGGCTCCACGTGCCGCCCTCCCCGTCCCCGTCCTCCGCCACCATCACCAAGTCCTTCT
GCAACGAGGTGCTCATCCTCTCCGCGCTCCGCCACCCGCACCTCGTCCGCCTCCACGGCTTCTGCGCCGACCCGCGCGCG
CTGCTCCTCGTCTACGACTTCGTCCCCAACGGCACCCTCTCGCACCACCTCCACCGCCGGGGCCGCGACGCCGCGGCCGC
CGCGCAGCTGCCGCCGCCGCTCCCGTGGCGGACCCGGCTCGCCATGGCGGCCCAGATCGCGTCGGCGCTGGAGTACCTCC
ACTTCGCCGTGAAGCCGCACGTGGTCCACCGCGACGTCACCTCCTCGAACATCTTCGTGGAGGCGGACATGCGCGCGCGC
CTCGGCGACTTCGGCCTGTCGCGGCTCCTGGCGACGCCCGACGCCTGCTCCACGGCGACCGGGCGGGAGGTGGTGTGCTG
CACCGCGCCGCAGGGGACTCCCGGGTACCTGGACCCGGACTACCACCGGTCGTTCCAGCTGACGGAGAAGAGCGACGTGT
ACAGCTTCGGCGTGGTGGTGCTGGAGCTGGTGACGGGGCTGCGGCCCGTGGACGTGGGCCGGGAGCGGCGGGACGTGACG
CTGGCGGACTGGGTGGTGTCCAAGATCCAGATCGGCGAGCTGAGGGAGGTGATGGACCCGGCGGTGCTGGGCGAGCTCCC
CGGCGTGATGCCCAGCGTGGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGCCGGACAAGGACGACCGGCCCGACG
CCCGGGAGGCGCTGGCCGAGCTGAGGAGGATCCAGGGGATGCTCCCCGAGCTGTCCAGCCACAAGGACTCCTCTTGA---
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>chr5B_1_TraesCS5B01G453800
GACCATAAC--TACTAGACAATGACGCTACTGGTACGACTTATGCATGTTTCAACACTACAGTCCTCCTCTTGGCTATCC
CCTTCCCCGTCAAGT-CCCACGCCTAACCAATGTCATCAACACTATCGTTGCTGCCTCGTTGACCACTTGCTATCCTTTT
CGGGGCTCGTGAGACATATGGAGAAGGGGGTTTAATGTACATATTTGAGTCGCTAAAATTTCCAGATATGTTCGTGTTGA
CTCATTCATGGACCGCCCATCCTGGTCGATCGGAATTTCAGATACAATAACCTTTGATTTGAACAAGGGGCATCTGATCC
TTCAATCACACTCGCTTATC---CACCACTCATCCTCCTGTGG-----TTTCTTTTGTGAGACACAATCTTCATGCCAAT
CTCATGCAATGTGG---TCGAAATTGAGATTTGCCCGCTAAATCCGGATAGTTTATTGACAATAACTTCGAAACCATACC
ACTACTCGCACAAGTTATGGATCATTCAAGCACTCACCTCCCATCCTCATTGTCCAACTCAGCTCCCTTCTCGGCCTACA
ATTCACCCCTCGATCGAGTCGCCACGCCTTACCAGCGACCTCCACCGCCATCCTTGCCGCCTCAAAGACCGCCGCCGCGC
TCCTCTCCTCA--------CCATGCCGCCCCGTCAACCCTACAATTTAGTTTCTCGACATAATTGTGTACACACCTCTGG
TGCGCCTTGCGGAAACACAAGGGGGGAAGAAAGTCCATTGTACACATGGAGCAGTTGAAATTTCCAGATATGTTCGTCTT
AATTTTTGCCAAGAGGAGACCCG--GAGAATCGCATTCCC---GTGGACCCCAGC-GCCCATGTGCTGACGTGAAAACGA
CTCACGGC---ACTTCGCTGGCAG----TGGCCACTGCAGCAGAAGCAACCCTC----GTCTCCCCACCGGTCGCCGCCC
C--------------CCAAATTCCCCTCCTTTCCTCCCCGCTCCTCGGCCCGATCGAACGGCCGCGCCTGGATCGCGTCG
CGCCGGAGCCCAGATGCCCCCGCGTCTCCTGCTCCTGCTCCTCCTCCTGGCCGCCGCCCTCCCGCCGCCGGCCGCGTCCC
GGCTCGGCGACCACGAGCCCCCTCCTCCGCCCCCGCACCCGCGCGCCCGCCAGCACCGGGCCCAGAGCGGCGGCGGC---
ACCGGGGGCGCGAGCCGCGTGCTCACCACCGCGCTCGTCGCCGCCGCGTCGCTCCTGGCCGTGCTCCTGCTCTACCTCTG
CGTCGCCATCGCCGTGCGCCGCATCCGGGGGAAGGGGGAGGGCGGC------CGCGCGTCGCGGCAGCAGGCCTCGCAGT
CCTCCCGCGCGGCCGCGTTCCTCCGCCGCCACGGCCTGCACCACAGCCGCCCGGCCTTCACCTACGAGCAGCTCCGCGCC
GCCACGGCCGGGTTCGACGCCGCGCGCAAGCTCGGGGACGGCGGGTTCGGGACGGTCTACCTCGCGTACCTCCCGCCCGC
GGGCCGCCCCGCCGCCGTCAAGCGGCTCCACGTGCCGCCCTCCCCGTCCCCGTCCTCCGCCACCATCACCAAGTCCTTCT
GCAACGAGGTGCTCATCCTCTCCGCGCTCCGCCACCCGCACCTCGTCCGCCTCCACGGCTTCTGCGCCGACCCGCGCGCG
CTGCTCCTCGTCTACGACTTCGTCCCCAACGGCACCCTCTCGCACCACCTCCACCGCCGGGGCCGCGACGCCGCGGCCGC
CGCGCAGCTGCCGCCGCCGCTCCCGTGGCGGACCCGGCTCGCCATGGCGGCCCAGATCGCGTCGGCGCTGGAGTACCTCC
ACTTCGCCGTGAAGCCGCACGTGGTCCACCGCGACGTCACCTCCTCGAACATCTTCGTGGAGGCGGACATGCGCGCGCGC
CTCGGCGACTTCGGCCTGTCGCGGCTCCTGGCGACGCCCGACGCCTGCTCCACGGCGACCGGGCGGGAGGTGGTGTGCTG
CACCGCGCCGCAGGGGACTCCCGGGTACCTGGACCCGGACTACCACCGGTCGTTCCAGCTGACGGAGAAGAGCGACGTGT
ACAGCTTCGGCGTGGTGGTGCTGGAGCTGGTGACGGGGCTGCGGCCCGTGGACGTGGGCCGGGAGCGGCGGGACGTGACG
CTGGCGGACTGGGTGGTGTCCAAGATCCAGATCGGCGAGCTGAGGGAGGTGATGGACCCGGCGGTGCTGGGCGAGCTCCC
CGGCGTGATGCCCAGCGTGGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGCCGGACAAGGACGACCGGCCCGACG
CCCGGGAGGCGCTGGCCGAGCTGAGGAGGATCCAGGGGATGCTCCCCGAGCTGTCCAGCCACAAGGACTCCTCTTGACTT
TGGATTGCACAGATCAGAACTGAGCCAGCTCTGCAAAATCTCGGATTGTTGATGGCTGCGGTTCAAATCCTGATCTCTTT
GGCTGACAGATTAGTCGCACTGATCGTTGCA-TTTGTCGAAGACGAGTGCCTCATT---GTGGATGACCGGATGGCAAAT
CTGTTCAGACATGTCGCGACCCAAATCCAAGGTACGTGGAGGTT----TATAGATATACTGAGATCAATCAACGGTAGGA
GGACACTGTGACAGTAATACGAGCTTGA-TT-GTGTCGGTTCTGTGAGCTCAAGGAGTAGCACGAGCAA-------GCTC
CTCCGCCTGTTGTGTTTGGCAGTGGCTTGTGATCAAAATGAACAACTGTATGTAACATAACCCG-----------GCCGT
TCTTGTCAAGATGAACACCTGTAAGTTGGTTCTGTAGTCAAGAAACTGATGCTTGGTACGTACGTACTCCCTCCGTTCCG
AATTACTTGTCTTTGATTTGTCTAGATACGGATGTATCTAGTACTAAAATGAGGCTAGATACATCTGTATCTAGACAAAT
CTAAGACAAGTAATTCAGAACGGAGGGAGTATGAGACAGGCACCCCACAATTGGGTTCTTGTTATATCGCAAGTGGTAGT
ATTAATTTTCTCCATGATGATGATTATCCTATCATACAGTTGACTTGGCCTGGAAAATGTTCAGTACTTAGTACTCCCTC
CGTCCGGGAATACTTGTTTGAAATACTTGTCAGAGAGAGAGAGAAATGGATGTTCCGCAAGTATTTCCGGATGAAGGGAG
TACATTTCTATCTCT-TGCATGTTGATTTTCCAGGGATCACCCACT--CCTACTTGGAGTTTAATTATGTGCCTCCTCGT
TTTCACATAGGTTTGGTTGCTTGCCAGCGTCAAACCTCTGATAGAGCAAATCAACGCTAGTTACCAACTCTATCCATACA
CAGCACATTATGTTCACTAGATAAGATATACTGTCAAACCAAGAGAGAGACCAAATGAAAGATGTCAA
>chr5D_1
GACCATGACTTTACTAAACAATGACGCTACTGGTACGACTTATGCATCTTTCAATCCTACACTCCTCCTCTTGGCTACCC
CCTTCCCC--CGAGTCCCCACACCTAACCAACGTCATCAACACCATTGTTGGTGCCTCACCGACCGCTTGCTCTTCTTTC
CGGGGTTTGTGAGACATATGGAGAAGGGAGTTTAATGTACATATTTGAGTCGTTAAAATTTTCAGATGTGTTCGTGTTCA
CTTATTGATGCACCGCCCATCTTGGTTGATCGGAATTTCAGATACAGTAACCTTTGATTTGAACTAGGGGCGTCTGCTCC
TTCAATCACGCTCTCTTAATATGCATCACTCATCCTCCCGTGA-----TTTCTTCTGTGAGACACAATCTTCG-GCCAAT
CTCTTGCAACGTAGTACTCGAAATTGAGATTTGACCGCTAAATTCGGATAATTTATTGACAATGACTAGGAGACCATGAC
GCCACCCTTAAGAGTTATGGATCACTGGAGCACTGACCTCACATCCTCCTCGTCCGAGTCATCCCCCTTCCCGGCCTACA
GTTCACCCCTCGATCGAGTCCCCACGTCTCACCGACGACCTCCACCGCCATTCTTGCCGCCTCACCGACCGCCGCCGCAC
TCCTTGCCTCGCCATGCGCCCATGCCACCGTGTCAAACCTACAATTTTGTTTCTCAATACGGTTGTGTACACACCTCGGG
TGCGCCTTGCA-AAACACGAGGGGGAAAGAAAGTCTATTGTACACATGGAGCAGTTGAAATTTCCAGATATGTTCGTCTT
AATTTTCTCCAAGAGGAGACCCGGA----ATCGCATTCCCCCGGTGGACCCCAGC-GCCCATGTGCTGACGTGAAAACGA
CTCACGGCGGCACTCCGCTGGC----AGTGGCCACTCCAGCAGAAGCAACCCTC----GTCTCCCCACCGGTCGCCGCCC
CCCCTCCCTCCAGTACCAAATTCCCCTCCTTTCCTCC---------GGCCCGATCGAACGACCCCGCCTGGATCGCGCCG
CGCCGGAGCCCAGATGCCCCCGCGCCTCGTGCTCCTGCTCCTCCTCCTGGCCGCCACCTTCCCACCGCCGGCCGCGGCCC
GGGTCGGCGACCACGAGCCCCCTCCCCCTCCCCCGCACCCGCGCGCCCGCCAGCACCGGGCCCAGAGCGGCGGCGGT---
ACCGGGGGCGCGAGCCGCGTGCTCACCACCGCGCTCGTCGCCGCCGCGTCGCTCCTCGCCGTGCTCCTGCTCTACCTCTG
CGTCGCCATCGCCGTGCGCCGCATCCGCGGCAAGGGGGAGGGCGGCGGCGGGCGCGCGTCGCGGCAGCAGGCGTCGCAGT
CCTCCCGCGCGGCGGCGTTCCTCCGCCGCCACGGCCTGCACCACAGCCGCCCGGCCTTCACCTACGAGCAGCTCCGCGCC
GCCACGGCCGGGTTCGACGCCGCGCGCAAGCTCGGGGACGGCGGCTTCGGGACGGTGTACCTCGCGTACCTCCCGCCCGC
GGGCCGCCCCGCCGCCGTCAAGCGGCTCCACGTGCCGCCCTCCCCGTCCCCGTCCTCCGCCACCATCACCAAGTCCTTCT
GCAACGAGGTGCTCATCCTCTCCGCGCTCCGCCACCCGCACCTCGTCCGCCTCCACGGCTTCTGCGCCGACCCGCGCGCG
CTGCTCCTCGTCTACGACTTCGTCCCCAACGGCACCCTCTCGCACCACCTCCACCGCCGGGGCCGCGGCATCGCCGCCAC
GCCGCCC---CCGCCGCCGCTCCCCTGGCGGACCCGGCTCGCCATGGCGGCCCAGATCGCGTCGGCGCTGGAGTACCTCC
ACTTCGCGGTGAAGCCGCACGTGGTCCACCGCGACGTCACCTCCTCCAACATCTTCGTGGAGGCGGACATGCGCGCCCGG
CTCGGCGACTTCGGGCTGTCGCGGCTCCTGGCGACGCCCGACGCCTGCTCCACGGCGACCGGGCGGGAGGTGGTGTGCTG
CACGGCGCCGCAGGGCACGCCGGGGTACCTGGACCCGGACTACCACCGGTCGTTCCAGCTGACGGAGAAGAGCGACGTGT
ACAGCTTCGGCGTGGTGGTGCTGGAGCTGGTGACAGGGCTGCGGCCCGTGGACGTGGGCCGGGAGCGGCGGGACGTGACG
CTGGCGGACTGGGTGGTGTCCAAGATCCAGATCGGCGAGCTGAGGGAGGTGGTCGACCCGCCGGTGCTGGGCGAGCTCCC
CGGCGTGATGCCCAGCGTGGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGCCGGACAAGGACGACCGGCCCGACG
CCCGGGAGGCGCTGGCCGAGCTGAGGAGGATCCAGGGGATGCTCCCCGAGCTGTCCGGCCACAAGGACTCCTCTTGACTT
TGGATGGCACAGATCAGAACTGAGCCAGCACTGCAAAATCTATC------------------------CTGACCGC--TT
GGCTGACAGATTGGTCGCAGTTATCGTTGCA-TTTGTCGAAGACGAGTGCCTCATT---GTGGATGACCGGATGGCAAAT
CTGTTCAGACATGTCGCGACCCAAATCCAAGGTACGTGGAGGTT----TATAGATATACTGAGATCAATCAACGGTAGGA
TGATACTGTGACAGTGATATGAGTTTAC-CT-GTGTTGGTTCTGTGAGCTCAAGGAGTAGCATGAGCAA-------GCTC
CTCTGCCTTTTGTGTTTGGCAGTAGCTTGTGATCAAAATGAACAAGTGTAACATA-GAGGAGGATTCTTAGTAATGCTGT
TCCAGTCAAGATGAACACCTGTAAGTTGGTTCTGTAGTCAAGAAACTGATGTTAGGTACG--------------------
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>chr5B_13
--------------TAGACAATGACGTTGCTGGTACAACTTATGGATCTTTCAACCTTACA---CTCCTCTTGGCTACCC
CCTTCCCCGTCGAGTCCCCACGCCTAACCAACCTCATCAACACCATTGTTGGTGCCTCACCGACCGCTTGCTCTCCTTTC
CGGGACTTGTGAGACATATGGAGAAGGGAGTTTAATGTACATATTTGAGTCGTTAAAATTTCCAAATGTGTTCGCGTTCA
CTCATTGCACCGT--CCCATCCTGGTCGACCGGAATTTCAGATACAGTAACTTTTGATTTGAACAAGGGGCGTCTGATCC
TTCAATCACACTCGCTTGC---GCATCACTCATCCTCCCGTGCCGTGTTTTCTTTTGTGAGACACAATCTTCATGCCAAT
CTCATGCAATGTAGTACTCGAAATTGAGATTTGACCGCTAAATCCGGATAGTTTATTGACAACAACTTCGAAACCATACC
ATTGCTCGCACGAGTTATGGATCATTCGAGCACTTACCTCCCATCCTCATTGTCCGACTCACCTCCCTTCTCGGCCTACA
ATTCACCCCTCGATCGAGTCCCCACGCCTTACCAGCGACCTCCGCCGCCATCCTTGCCGCCTCACAGACCGCCGCCGCGC
TCCTCACCTCA--------CCATGCTGCCCCGTCAACCCTACAATTTTGTTTCTCGACATAATTGTGTACACACCTCTGG
TGCGGCTTGCGGAAACACAAGGGGGAG-GAAAGTCCATTGTACACATGGAGTAGTTGAAATTTCCAGATATGTTCGTCTT
AATTTTCCCCAAGAGGAGACCCGGAGAGAATCGCATTCCC---GTGGACCCCAGC-GCCCATGTGCTGACGTGAAAACGA
CTCACGGC---ACTCCGCTGGCAGGGAGTGGCCACTGCAGCAGAAGCAACCCTC----GTCTCCCCACCGGTCGCCGCCC
CCCG----TCCAGTACCAAATTCCCCTCCTTTCCTCCCCGCTCCTCGGCCCGATCGAACGACCGCGCCTGGATCGCGCCG
CGCCGGAGCCCAGATGCCCCCGCGTCTCCTGCTCCTGCTCCTCCTCCTGGCCGCCGCCCTCCCGCCGCCGGCCGCGGCCC
GGCTCGGCGACCACGAGCCCCCTCCTCCGCCCCCGCACCCGCGCGCCCGCCAGCACCGGGCCCAGAGCGGCGGCGGCGGC
AGCGGGGGCGCGAGCCGCGTGCTCACCACCGCGCTCGTCGCCGCCGCGTCGCTCCTCGCCGTGCTCCTGCTCTACCTCTG
CGTCGCCATCGCCGTGCGCCGCATCCGCGGGAAGGGGGAGGGCGGC------CGCGCGTCGCGGCAGCAGGCCTCGCAGT
CCTCCCGCGCGGCCGCGTTCCTCCGCCGCCACGGCCTGCACCACAGCCGCCCGGCCTTCACCTACGAGCAGCTCCGCGCG
GCCACGGCCGGGTTCGACGCCGCGCGCAAGCTCGGGGACGGCGGCTTCGGGACGGTGTACCTCGCGTACCTCCCGCCCGC
CGGCCGCCCCGCCGCCGTCAAGCGGCTCCACGTGCCGCCCTCCCCGTCCCCGTCCTCCGCCACCATCACCAAGTCCTTCT
GCAACGAGGTGCTCATCCTCTCCGCGCTCCGCCACCCGCACCTCGTCCGCCTCCACGGCTTCTGCGCCGACCCGCGCGCG
CTGCTCCTCGTCTACGACTTCGTCCCCAACGGCACCCTCTCGCACCACCTCCACCGCCGGGGCCGCGCGGCCGCCT----
--CGCCGCTGCCGCCGCCGCTCCCCTGGCGGACCCGGCTCGCCATGGCGGCCCAGATCGCGTCGGCGCTCGAGTACCTCC
ACTTCGCGGTCAAGCCGCACGTGGTCCACCGCGACGTAACCTCCTCCAACATCTTCGTGGAGGCGGACATGCGCGCCCGG
CTCGGCGACTTCGGCCTGTCCCGGCTCCTGGCGACGCCCGACGCCTGCTCCACGGCGACCGGGCGGGAGGTGGTGTGCTG
CACCGCGCCGCAGGGGACTCCCGGGTACCTGGACCCGGACTACCACCGGTCGTTCCAGCTGACGGAGAAGAGCGACGTGT
ACAGCTTCGGCGTGGTGGTGCTGGAGCTGGTGACGGGGCTGCGGCCCGTGGACGTGGGCCGGGAGCGGCGGGACGTGACG
CTGGCGGACTGGGTGGTGTCCAAGATCCAGATCGGCGAGCTGAGGGAGGTGGTGGACCCGCCGGTGCTGGGCGAGCTCCC
CGGCGTGATGCCCAGCGTGGAGGCGGTGGCGGAGCTTGCGTTCCGGTGCGTGGCGCCGGACAAGGACGACCGGCCCGACG
CCCGGGAGGCGCTGGCCGAGCTGAGGAGGATCCAGGGGATGATCCCTGAGCTGCCCAACCACAAGGATTCCTCTTGACTT
TGAATTGCACTGCA-------------------CAATCTCTCGGGTTGTTGATGGTCGTGTTCCAATGCTGACTTC--CT
GGCTGAAGGATTGGCATCATCCTC---TGCA-TTTGTCGAAGACGAGTGCTCCCTCATGGTGGATGGCTGGATGGCAGAT
CTGTTCAGAGATGTCGCGAC------CCAAGGTACGTGGAGGTT----TATAGATATACTGAGATCAATCAGCGGTAGGA
GAATACTGTGACAGTAATATGAGCTTTGCTT-GTGTTGGTTCTGTGAGCTCAAGGAGTAGCATGAGCACTGAGCAGGCTC
CCCTGCCTTTTGTGTTTGGCAGTAGCTTGTGATCAAAATGAACAAGCGTAACATAAGAGGAGGATTCTTAGTAATGCTGT
TCCAGTCAATATGAACACCTGTAAGCTGGTTCTGTAGTCAAGAAACTGATGTTACGTAC---------------------
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----------------------------GTATGAGACAGGCATCCCACAATTGGGTTGTTGTTATATCGCAA---GTAGT
ATTAATTTTCTCCATGATGGTGCATATCCTCTCTCAAAGTTGACTTGGCCAGGAAAATGTTCAGTACTTTGTCCAGAAAT
ACTTG------------TTGAAATACTTGTTGGAG---------AATGGATGCTCTGCAAGTATTTTCGACGG-AGGGAG
TACACTTCTTTCTCTGTGCATGTTGATTTTGCAGGGATCACCCACTTCCCTACTTGGAGTTTAATTATGTGCCTCCTCGC
TTTCACATATGTTTGGTTGCTTGCGAGCGACAAACCTCTCATAGAGCAAACTAACACTAGTTACCAATTCT---------
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>chr5A_678
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-----------------------------------------------------------TAGTTGTGTACACACCTGGGG
TGTGCCTTGCA-AAGCACAAGGGAGAAAGAAAGTCTATTGTACACATGGAGCAGTTGAAATTTCCAGATATGTTCGTCTT
AATTTTCCCCAAGAGGAGACCCGGA----ATCGCATTCCCCCGGTGGACCCCAGCGGCCCATGTGCTGACGTGAAAACGA
CTCACGGC---ACTCCGCTGGC----AGTGGCCACTGCAGCAGAAGCAACCCTCCCTCGTCTCCCCACCGGTCGCCGCCC
CCCG----TCCAGTACCAAATTCCCGTCCTTTCCTCCTCGCTCCTCGGCCCGATCGAACGGCCCCGCCTGGATCACGACC
CGCCGGAGCCCAGATGCCCCCGCGT------CTCCTGCTGCTCCTCCTGGCCGCCGCCCTCCCGCCGCCGGCCGCGGCCC
GGCTCGGCGACCACGAGCCCCCTCCC---CCCCCGCACCCGCGCGCCCACCAGCACCGCGCCCAGAGCG---GCGGCGGC
ACCGGGGGCGCGAGCCGCGTGCTCACCACCGCGCTCGTTGCCGCCGCGTCGCTCCTCGCCGTGCTCCTGCTCTACCTCTG
CGTCGCCATCGCCGTGCGCCGCATACGCGGCAAGGGGGA---------CGGGCGCGCGTCGCGGCAGCAGGCGTCGCAGT
CCTCCCGCGCGGCCGCGTTCCTCCGCCGCCACGGCCTGCACCACAGCCGCCCGGCCTTCACCTACGAGCAGCTCCGCGCC
GCCACGGCCGGGTTCGACGCCGCGCGCAAGCTCGGGGACGGCGGCTTCGGGACGGTGTACCTGGCGTACCTCCCGCCCGC
GGGCCGCCCCGCCGCGGTGAAGCGGCTCCACGTGCCGCCCGCCCCGTCCCCGTCCTCCGCCACCATCACCAAGTCCTTCT
GCAACGAGGTGCTCATCCTCTCCGCGCTCCGCCACCCGCACCTCGTCCGCCTCCACGGCTTCTGCGCCGACCCGCGCGCG
CTGCTCCTCGTCTACGACTTCGTCCCCAACGGCACCCTCTCGCACCACCTCCACCGCCGGGGCCGCGGCGCCGCGGCCGC
AGC------GCCTCCGCCGCTCCCCTGGCGGACCCGGCTCGCCATGGCGGCCCAGATCGCGTCGGCGCTCGAGTACCTCC
ACTTCGCGGTCAAGCCGCACGTGGTCCACCGCGACGTCACCTCCTCTAACATCTTCGTGGAGGCGGACATGCGCGCCCGG
CTCGGCGACTTCGGGCTGTCGCGGCTCCTGGCGACGCCCGACGCCTGCTCCACGGCGACCGGGCGGGAGGTGGTGTGCTG
CACGGCGCCGCAGGGTACGCCGGGGTACCTGGACCCGGACTACCACCGGTCGTTCCAGCTGACGGAGAAGAGCGACGTGT
ACAGCTTCGGCGTGGTGGTGCTGGAGCTGGTGACGGGGCTGCGGCCCGTGGACGTGGGCAGGGAGCGGCGGGACGTGACG
CTGGCGGACTGGGTGGTGTCCAAGATCCAGATCGGCGAGCTGAGGGAGGTGGTGGACCCGCCGGTGCTGGACGAGCTCCC
CGGCGTGATGCCCAGCGTGGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGCCGGACAAGGACGACCGGCCCGACG
CCCGGGAGGCGCTGGCGGAGCTGAGGAGGATCCAGGGGATGCTCCCCGAGCTGTCCAACCACAAGGACTGCTCTTGACTT
TGGTTTCCACATATCAGAATTGTGCGAGCACTGCACAATCTCTCGGGTT-------------------------------
--------GATTGGTCGCAGTTATCGTTGCATTTTGTCGAAGACGAGTGCCTCATT---GTGGATGACCGGATGGCAAAT
CTGTTCAGACATGTCGCGATCCAATTCCAAGGTACGTACGCGTGAGGCTATAGGTATACAGAGATCGATCAACGGTAGGA
TGATACTTTGACAGTGATATGAGCTTACTTTGGTGTTGGTTCTGTGAGCTCAAGGAGTAGTATGAGCTA-------GCTC
CTCTGCCTTTTGTGTTCGGCAGTAGCTTGTGATGAAAATGAACAAGTGTAACATAAGAGGAGGATTCGTAGTAACGCTGT
TCTTGTCAATATGAACTCCTGTAAGTTGGTTCAGTAGTCAAGAAACTGATGTTAGGTAC---------------------
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----------------------------GTATGAGACAGGCACCCCACAATTGGGTTCTTGTTATATC------------
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>SNPs
------S----------------------------------------S-------S-----S---------------S--
-----------S-------------------S-----------S--S----S------SSS----S------S------S
-------S--------------------S-----------------------S--------------S----------S-
------S---S-----------------------------------S------------------------S--------
------------------SS-----S------------S---S-------------------------------------
------------S--------------------S----------------------------------------------
-----------S---------------S------S--------------------S-----S------------------
--------------------S-------------------------------------------S---------------
-----S-----------------------------------------S--------------------------------
-------------------------S------------------------------------------------------
------SS------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------------------------S--
----------------------------------------------------------------------------S---
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--------------------------------------------------------S-----------------------
---------------------------S----------------------------------------------------
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--------------------------------------------S-----------S-----------------------
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-------------------------------------------------------------------S------------
S----S------------------S-------------------------------------------------------
-------S--------------------------------------S-----------------------------S--S
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---------------------------------------------------S--------S-------------------
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-----------------------------S--------------S----------SS-S-S-S---SS-SSSS-SSSS--
------------S------S-S----------------------------------------------------------
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---S---------------S------SS--------S-------------------------S-----------------
---S----S--------------S---------------------S----SSSS-SSSSSSSSS-------------S--
---------------------------------------------------S-S------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------SSS-----
-------------------S--SS------S--SS-S-------------S------------------S--S-SSSSSS
SS-SSSSSSSSSSSSSS-------------SS---SSSSSSSSS--------S--S----------S--SSS-S------
----S----S--------------------S------------------------------------------------S
---------S--------------S----S---------S----------SS---S-----------S---SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_168
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--------------------------------------------------------------------TGCTATCCTTTT
CGGGGCTC------------------------------------------------------------------------
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>reverse_1887
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----------------------------------------------GAACATCTTCGTGGAGGCGG--------------
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>forward_536
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------------------------------------CCTCCCATCCTCATTGTCCA------------------------
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>reverse_2493
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------------AGTCGCACTGATCGTTGCAT------------------------------------------------
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