>input_sequence_54211
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-----------------------------------------ATGGACGAGACCGGCTCATCCCCCT--------------
----------------CCTTCGGCCACCTGCTCCCCTGCCTGGACCTCGCCGAGCGCCTGGCGTCGCGGGGCTACCGTGT
GTCGCTCGTCTCTGCGCCGCGAAACATCGCGCGGCTCCCGC---CTGTGCGCCCAGCTGTGGCGCCGTTCGTCGGCCTCG
TGGCACTGCCGTTCCCGCGCGTGGCCGGGCTCCCCGACGGCGCCGAGTCCACCAACGACCTCCCCTTCGACAAGTTCGAG
CTCCATCGCAAGGCAGCCGACGGCCTCACCGCGCCCTTCTCCGAGTACTTGGAGTCCCTATGCGCCGAGCCCGGCGGAAG
GAAGCCCGATTGGATCATCGTGGACTACTTCAACGACTGGGCGGCCGCCGCCGCCATCCAACACAAGGTTC---------
--------------------------------------------------------------------------------
----------CATGTGCGATGCTTGCCCTACTCGCTGCGACTGTGGTCGCCACCTTGGACATTCTACTGTCCGAGC----
-------------------------------------------------GCACCGCGTCCCGATCGGCAGGAGCTACAAG
GTTCGCTACGGAGAAGACGGGGCTAATGGCTCTACAATGCAAATGG------GGGATGTCCATCGCCGAGCAGGTCTCCT
CGACGCTCCAGAGGTGCAAACTCGTTGCCATGCGGAGTTGCAATGAGTGGGAGCCCGAGAGCGTCGTTCATGCCGCGACG
TTCGGCGGCAAGCCGGTTGTCCCCTTCGGCCTCCTGCCGCCGTCGCCTGACGGAGGTCGCCGCGGCGACAGAGGGAAC--
-------GACCATACAGCCGTGCGATGGCTCGATGCGCAGCCGGCCAAGTCGGTCGTGTACGTCGCGCTCGGAAGCGAGG
TGCCGCTGCGCCCGGAGGAGGTGCGCGAGCTCGCCCTCGGGCTTCAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTGAGG
AAGCCACAG------------GCCGTCGACGCCGAC---GTGCTCCTCCCCCAGGGGTTCGAGGAGTGCACGCGCGGCCA
TGGCCTCGTGATAACGGGCTGGGTTCCTCAGCTCGGGATACTGACGCACG--------ACGCCGTGGCTGCGTTCCTGAC
GCACTGCGGCCTGAGCTCCACCATCGA-------------GGGGCTCCTGTTCGGGCGTCCTCTCATCATGCTGCCCATC
ATGGGGGACCAAGTGCCGAATGCAAGGCTGATGGAGTGTAGAAAGGTCGGCGTGCTGGTGCCGAGAAACGAGAACGACTG
TTCGTTTGACCAAGAAGGCGTCGCGACGGCGATTCGGGCTGTGGCGGTAGAGGAAGAAGGCAGGAGAGTGTTTACAGCCA
ACGCCAAGAAGCTGCAAGAGATCGTGTCGGACACGGAGTGCCATGAGAGGTATATTGACCGCTTTATTCAGCAGCTTAGA
TGTTACAAGTAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5B_1_TraesCS5B01G106700
CCTCCATACATGGATTTTTGCCTTGTTTGGAGCACAGGAGGCCCATAGTGAAAGCCATCCCTTGTGCGCTATCACTGATG
ATGAAGGTTCCGGCCGTCCGGACCTTGTTTTGTTCATGCTCATTTTCAGGTGATAAGCGGATCCTACTGTGAACTGACCA
TTCCTAGTGAAGTTCCAAGCCATGTACAAAGGGTGGCCCTGGAGGCACACACTGAGCCTGCTGAGGCGCGAAGAAGGAAT
GTCTTTTGGCTAGAAGATGGTGGAGGGCAAGAGGAGGTTGCTACGAATGTGGATGATGCAATGGCGGAAGATGCTGAAGA
GGAGACCAATGCTTGATTCAGTTTAACGGTAGCATGTATTGCGTGCACCTGCATGTGGCTTTTGCTGCGAGATGTTTGTG
CGCACTTTTTTTCAGATTTTTTTGGCATTTCAAAACGTGTTTTCCAAAGTGGGTTCATATGTACCCGGGTTCATCTATGC
ACTTTCCGGCCCTGGAGGCACATACTGAGCCTGCTGAGGCGCAAAGAAGGAATGTCTTTCGGCTAGAAGATGGTCGAGGG
CAAGAGGAGGTTGCTACGAATGTGGATGATAGGTGCCGCAGGTAAAAAAAAAGGTAGGTGCTACCAAAATATCGTCATGT
GAACAAGGACGGAAATGTCCACACCCCAACGGGGGAACAAAGTATCTCCATGTGAAGGAACCCCACGCATAGCAATTCAC
CACCCTCAGCATAAGGCACACGCAGGTGCACACAATACATGCTACTGTTAAACTGAATCAAACATTGGTCTCCTCTTCAG
CATCTTCCGCCATTGCATGGATGGTGGCAACGGTCATTGCCTAAAAAAAGGCAAGACAGGTAAACGAAGTG-AAAAAACA
GATTTCTCTACTTTACCGTGCGATTCGTAGGGGCTATTCATAGGAGTTGAGATGCGATATCCCGGCAAAAATCGGTAAAC
TAAGCCAATCCAAGCTCCTTGGACGCGCGCGCTCTGTCCCCATGGACGAGACCGGCTCATCCCCCT--------------
----------------CCTTCGGCCACCTGCTCCCCTGCCTGGACCTCGCCGAGCGCCTGGCGTCGCGGGGCTACCGTGT
GTCGCTCGTCTCTGCGCCGCGAAACATCGCGCGGCTCCCGC---CTGTGCGCCCAGCTGTGGCGCCGTTCGTCGGCCTCG
TGGCACTGCCGTTCCCGCGCGTGGCCGGGCTCCCCGACGGCGCCGAGTCCACCAACGACCTCCCCTTCGACAAGTTCGAG
CTCCATCGCAAGGCAGCCGACGGCCTCACCGCGCCCTTCTCCGAGTACTTGGAGTCCCTATGCGCCGAGCCCGGCGGAAG
GAAGCCCGATTGGATCATCGTGGACTACTTCAACGACTGGGCGGCCGCCGCCGCCATCCAACACAAGGTTC---------
--------------------------------------------------------------------------------
----------CATGTGCGATGCTTGCCCTACTCGCTGCGACTGTGGTCGCCACCTTGGACATTCTACTGTCCGAGC----
-------------------------------------------------GCACCGCGTCCCGATCGGCAGGAGCTACAAG
GTTCGCTACGGAGAAGACGGGGCTAATGGCTCTACAATGCAAATGG------GGGATGTCCATCGCCGAGCAGGTCTCCT
CGACGCTCCAGAGGTGCAAACTCGTTGCCATGCGGAGTTGCAATGAGTGGGAGCCCGAGAGCGTCGTTCATGCCGCGACG
TTCGGCGGCAAGCCGGTTGTCCCCTTCGGCCTCCTGCCGCCGTCGCCTGACGGAGGTCGCCGCGGCGACAGAGGGAAC--
-------GACCATACAGCCGTGCGATGGCTCGATGCGCAGCCGGCCAAGTCGGTCGTGTACGTCGCGCTCGGAAGCGAGG
TGCCGCTGCGCCCGGAGGAGGTGCGCGAGCTCGCCCTCGGGCTTCAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTGAGG
AAGCCACAG------------GCCGTCGACGCCGAC---GTGCTCCTCCCCCAGGGGTTCGAGGAGTGCACGCGCGGCCA
TGGCCTCGTGATAACGGGCTGGGTTCCTCAGCTCGGGATACTGACGCACG--------ACGCCGTGGCTGCGTTCCTGAC
GCACTGCGGCCTGAGCTCCACCATCGA-------------GGGGCTCCTGTTCGGGCGTCCTCTCATCATGCTGCCCATC
ATGGGGGACCAAGTGCCGAATGCAAGGCTGATGGAGTGTAGAAAGGTCGGCGTGCTGGTGCCGAGAAACGAGAACGACTG
TTCGTTTGACCAAGAAGGCGTCGCGACGGCGATTCGGGCTGTGGCGGTAGAGGAAGAAGGCAGGAGAGTGTTTACAGCCA
ACGCCAAGAAGCTGCAAGAGATCGTGTCGGACACGGAGTGCCATGAGAGGTATATTGACCGCTTTATTCAGCAGCTTAGA
TGTTACAAGTAGTGAAGGGAAGCGTACGTCTTGATGTTACCTGGAGTCCTGGACTTAGAACATGCAGTAGAACAAGCTTC
TGTATATTGGAATTTTTCTCAAACACGCACCAGTCATTCATTAAAGGAGGGGGAAGAATCCCAAAAATTCCACATTGTTA
CAGATTATTTTTAGCATCAGTACAGACATAAGCGCTCATATACACGCGCATACACTCTCCCCTATGAACGCACACACGCA
CACCCTACCTCTATGAGCACCTCCGAGAGACTGAGCCGACATATCATCTTGAGATTTACGAAGTCACCATAGGCGCCTCG
TCGTCGACGGGAACGTCTCCTCCCACTAAAAGCGCATCGCCGGAAATCCTGAAATAAATTCAGGAATAATACGGATCTTT
CCCCACCATCACAGTAGACAAGTAAACAGACTACTCGCTATCTACCCGCACTGGAGCTGCTCCACCGAAGCCTTCTCCAC
CACTCGTGAATATTCCTGCCAATCTCCATAGCTTGCCCTCCTCTTCAATTTGTTGTGTGATCCGCTGGAAGGACGGAGAT
GCTCTATTGAAGACGATATCATTCCGATGCTTCCAGAGCATCCACATACCTAGCAGGCACATTGCTCTGGTAGGTCGTCG
ACCATCACTCCTTTCATCCTGCCTGATGCACCACTCGCCCAAAGTTTTGTTATCCCTAGTCTCAAACTTCGGCCTTCTGA
TAGCTACACTGAACCAGTGCCAAACTTGCTTCGTGAAAGCGCAGTTAATCAGCAGGTGGCTCATGGTCTCCTCATGTTGA
TCACATAACGGGCAGGCATCTTGATGTGGCAACCCTCTAATCTGTCC-------GAAGTCCAGCACCGGTCCTTCATGGC
AAGCCATGGAAAGAAGCGACATTGCATGGGCGCTCGTGATTTCCATGTGAATTGTGCTGTTGTCGGCGTTCTGGGGACGG
GGGTCCCCAGACTTGCCTGCCCGCGGCCCTGCGGCGTGGCTCAAGTGGTGGCCCAGTAC
>chr5D_1
CCTCCATACATGGATTTTTGCCTTGTTTGGAGCACAGGAGGCCCATAGTGAAAGGC------------------------
-----GGTTCCGGCCGTCCGGACCTTGTTTTGTTCACGCTCATTTTCAGGTGATAAGCGGATCGTACTGTGAACTGACCA
TTCCTAGTAAAGTTCTAAGCTATGTACAAAGGGTGGCTCTGGAGGCACATACTGAGCCTGCTGAGGCGCGAAGAAGGAAT
GTCTTTCGGCTAGAAGATGGTGGAGGGCAAGAGGAGGTTGCTACGAATGTGTATGATGCAATGGCGGAAGATGCTGAAGA
GGAGTCCAATGCTTGATTCAGTTTAACAGTAGCATGTATTGTGTGCACCTGCGTGTGCCTTTTGCTGCGAGATGTAGGGG
TGGTGAATTGCTATGCGTGGGGTTCCTTCACATGGCGATACTTTGTTCTCCCGTTGGGGTGTAGACATTTCCCTTTTGGG
TCTTCGTTCACATGGCGATATTTTGGTAGCACCTACCTTTTTTTTTTTGACCTGCAGCACCTAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGATGGTGGCAGGGGACATGG-CTAAAAAAAGGTAAGACAGGTAAACGAAGTG-AAAAAACA
GATTTCTCTACTTTACCGTGTGATTCGTAGGGGCTATTCATAGGAGTTGAGATGCGATATCCCGGCAAAAATCGGTAAAC
TAAGCTAATCCAAGCTCCTTGGACGCGCGCGCTCTGTCCCGATGGACGAGACCGGTTCATCCCCCCCGCTGCACGTCGTT
ATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCCTGCCTGGACCTCGCCGAGCGCCTGGCGTCGCGGGGCCACCGTGT
TTCGCTCGTCTCTGCGCCGCGAAACATCGCGCGGCTCCCGC---CTGTGCGCCCAGCTGTGGCGCCGTTCGTCGGCCTCG
TGGCACTGCCGTTCCCGCGCGTGGCCGGGCTCCCCGACGGCGCCGAGTCCACCAACGACCTCCCCTTCGACAAGTTCGAG
CTCCATCGCAAGGCGGCCGACGGCCTCACCGCGCCCTTCTCCGATTACTTGGAGTCCCTATGCGCCGAGCCCGGCGGAAG
GAAGCCCGATTGGATCATCGTGGACTACTTCAACGACTGGGCGGCCGCCGCCGCCATCCAACACAAGGTTC---------
--------------------------------------------------------------------------------
----------CATGTGCGATGCTTGCCCTACTCGCTGCGACTGTCGTCGCCACCTTGGACATTCTACTGTCCGAGC----
-------------------------------------------------GCACCGCGTCCCGATCGGCAGGAGCGCCAAG
GTTCGCGACGGAGAAGACGGGGCTAATGTCTCTACAATGCAAATGG------GGGATGTCCATCGCCGAGCAGGTCTCCT
CGACGCTCCAGAGGTGCAAACTCGTTGCCATGCGGAGCTGCAGTGAGTGGGAGCCCGAGAGCGTCGCTCATGCCGCGACG
TTCGGCGGCAAGCCGGTTGTCCCCTTCGGCCTCCTGCCGCCGTCGCCTGACGGAGGTCGCCGCGGCGACAGCGGCAAG--
-------GACGATACGGCCGTGCGATGGCTCGATGCGCAGCTGGCCAAGTCGGTTGTGTACGTCGCGCTCGGAAGCGAGG
TGCCGCTGCGCCCGGAGGAGGTGCGCGAGCTCGCCCTCGGGCTTCAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTGAGG
AAGCCACCG------------GGCGTCGACGCCGAC---GTGCTCCTCCCTCAGGGGTTCGAGGAGTGCACGCGCGGCCG
TGGCCTCGTGATAACGGGCTGGGTTCCTCAGCTCGGGATACTGGCGCACG--------ACGCCGTGGCTGCGTTCCTGAC
GCACTGCGGCTTGAGCTCCACCATCGA-------------GGGGCTCCTGTTCGGGCGTCCTCTCGTCATGCTGCCCATA
ATGGGGGACCAAGTGCCGAATGCAAGGCTGATGGAGTGTAGGAAGGTCGGCGTGCTGGTGCCGAGAAACGAGAAGGACTG
TTCGTTTGACCGAGAAGGCGTCGCGACGGCGATTCGGGCTGTGGCGGTAGAGGAAGAAGGTAGGAGAGTGTTTACAGCCA
ACGCCAAGAAGCTGCAAGAGGTCGTGTCGGACACGGAGTGCCATGAGAGGTATATTGACCGGTTTATTCAGCAGCTTAGA
TGTTACAAGTAGTGAAGTGAAGCGTACGTCTTGATGTTACCTGGAGTCCTGGACTTGGAACATGCAGTAGAACAAGCTTC
TGTATATTGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr5A_819
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GGGTGGTGGCAAGGGACATTGCT--AAAAAAGGTAAGATAGGTAAACTAAGTGCAAAAAACA
GATTTGTCTACTTTACCGTGTGATTCGTAGGGGCTATTCATAGGAGTTGAGATGCGATATCCCGGCAAAAATCGCTAAAC
TAAGCTAATCCAAGCTCCTTGGACGCGCGCGCTCTGTCCCCATGGACGAGACCGGCTCATCCCCCCCGCTGCACGTCGTT
ATCTGCCCGTGGCTCGCCTTCGGCCACCTGCTCCCCTGCCTGGACCTCGCCGAGCGTCTGGCGTCGCGGGGCCACCGCGT
GTCGCTCGTCTCTGCGCCGCGAAACATCGCGCGGCTCCCGC---CTGTGCGCCCAGCTATGGCGCCGTTCGTCGGCCTCG
TGGCACTGCCATTCCCACGCGTGGCCGGGCTCCCCGATGGTGTCGAGTCCACCAACGACGTCCCCTTCGACAAGTTCGAG
CTCCATCGCAAGGCGGCCGACGGCCTCACCGCGCCCTTCTCCGACTACTTGGAGTCCCTATGCGCCGAGCCCGGCGGAAG
GAAGCCCGATTGGATCATCGTGGACTACTTCAACGACTGGGCGGCCGCCGCCGCCATCCAACACAAGGTTC---------
--------------------------------------------------------------------------------
----------CATGTGCGATGCTTGTCCTACTCGCTGCGACTGTGGTTGCCACCTTGGACATTATACTGTCCGAGC----
-------------------------------------------------GCACCGCGTCCCGATCGGAAGGAGCGCCAAG
GTTCGTGACGGAGAAGACGGGGCTAATGTCTCTACAATGCAAATGG------GGGATGTCCATCGCCGAGCAGGTCTCCT
TGACGCTCCAGAGGTGCAATCTCGTTGCCATGCGGAGCTGCAATGAGTGGGAGCCCGAGAGCGTCGCTCATGCCGCGACG
TTCGGCGGCAAGCCGGTTGTCCCCTTCGGCCTCCTGGCGCCGTCGCCTGACGGAGGTCGCCGCGGCGACAGCGGCAAG--
-------GACGATACGGCCGTGAGATGGCTCGATGCGCAGCCGGCCAAGTCGGTCGTGTACGTCGCGCTCGGAAGCGAGG
TGCCGCTGCGCCCGGAGGAGGTGCGCGAGCTTGCCCTCGGGCTTCAGCTGGCCGGGACGCGCTTCCTCTGGGCTCTGAGG
AAGCCACCG------------GCTGTCGACGCCGAC---GTGCTCCTCCCTCAGGGGTTCGAGGAGTGCACGCGCGGCCA
TGGCCTCGTGATAACGGGCTGGGTTCCTCAGCTCGGGATACTGGCGCACG--------ACGCCGTGGCTGCGTTCCTGAT
GCACTGCGGCTTGAGCTCCACCATCGA-------------GGGGCTCCTGTTCGGGCGTCCTCTCATCATGCTGCCCATC
ATGGGGGACCAAGTGCCGAATGCAAGGCTGATGGAGTGTAGGAAGGTCGGCGTGCTGGTGCCGAGAAACGAGAAGGACAG
TTCGTTTGACCGAGAAGGCGTCGCGACGGCGATTCGGGCTGTGGCGGTAGAGGAAGAAGGTAGGAGAGTGTTTACAGCCA
ACGCCAAGAAGCTGCAAGAGATCGTGTCAGAGACGGAGTGCCATGAGAGGCATATTGACCGGTTTATTCAGCAGCTTAGA
TGTTACAAGTAGTGAAGTGAAGCGTACGTCTTGATGTTACGTGGAGTCCTGGACTTAGAACATGCAGTAGAACAAGCTTC
TGTATATTGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5D_1026
--------------------------------------------------------------------------------
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----------------CCTTCGGCCACATGCTCCCGTACCTGGAGCTCGCCGAGCGGCTGGCGTCGCGAGGCCACCGCGT
GTCATACGTCTCCACGCCGCGCAACCTCGCCCGCCTCCCGC---CGCTGCGCCCGGCCGCGGCGCCGCGCGTCGACCTCG
TCGCCCTCCCGCTGCCGCGCGTCGACGGCCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCGTCGACCAGCGGGAG
CTCCACCTCAAAGCCTTCGACGGCCTCGCCGCGCCCTTCGCCGAGTTCATGGCCGCCGCGTGCGCCGATGAG---GGCAC
GAGGCCTCACTGGGTCATCGCCGACAGCTTCCACCACTGGGTCGCCGTCGCCGCCGTCCAGCAAAAGGTTCGGCTCACCT
GCCGCGCGCGCTGCTCGCTTCGTTCCATTAATTCCATCCCATGCACA-------TGTCAAATCTAGCTCGATGCTCAATC
AATCAGGTGCCATGCGCGATGCTTCTCCCGACCGCTGCTG---TGATCGCTATTGCGCGCGCCGA-------GACC----
-------------------------------------------------CGCCCTCGTTACAAGCAGGAGGACATGGCTC
CCATGTACGGCGAC--------------------CAAGGCGCATCG------GGTATGTCCCTCGCCCAGCGCTGGCTGT
TGACGAAAGAGAGGTCCGCGCTCGGGGTCATCCGGAGCTGCGTGGAGTGGGAGCCCGAGTCCTTCCCGCTGGTGCAACCG
CTCCTCGGCATGCCGGTCGTGCCTCTCGGCCTTCTCCCACCGTCACCCGACGGAGGCCGTCGTGCCGGCGGCACCAATGA
ATCATCAGAGCACGCCAGCGTGCGCTGGCTGGACGCGCAGTCGCCCGGCTCGGTGGTGTACGTGGCGCTGGGGAGCGAAG
TGCCGCTGCCCCTGGAGCAGGTACACGAGCTCGCCCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTCCGG
AAGCCCAGCGGCGCCGCCGTCCTAGATGACGGAGCC---GACATGCTTCCACCGGGTTTCCAAGAGCGCGCTCGCGGCCA
GGGGCTGGTGACCACGGGGTGGGTTCCTCAGATGAGCATCCTGGCGCACC--------CCGCCGTGGGCGGGTTCCTGAC
GCACTGCGGCCA-------------GAACTCGCTGATCGAAGGGCTCCTGTTTGGGCACCCACTCGTCATGCTGCCCATC
TTCGGCGACCAAGGCCCGAATGC---------------------------------------------------------
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>chr5B_1028
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------------------TTCGGCCACCTGCTCCCGTACCTGGAGCTCTCCGAGCGGCTCGCCGAGCGGGGCCACAGCGT
GACCTACGTCTCCACGCCGCGCAACCTCGCCCGCCTCCCGC---CGGTGCGCCCCGCCGCCGCGCCGCGCGTGGACCTCG
TCGCCCTCCCGCTGCCGCGCGTCGACGGCCTCCCCGACGGCGCCGAGTCCACCAACGACATCTCCTACGGCGAGCGTAAG
TTCCACTGGAAGGCCTTCGACGGCCTCGCCGCGCCCTTCGCGGAGTTCCTGGCCGCCGCGTGCGCCCACGAG---GCCAC
CAGGCCTCACTGGATCATCGCCGACTGCTTCCATCACTGGACCGCCTCCGCCGCCCTCGATCACAAGGTTCGAGTTCGAC
CCAATCCAATCCGCGAAAGACTGCTAACTTTCTTCCCGGTTAATTTGTTCCATGTCTCAAATCTAGCTCCATCAATCAC-
---CAGGTACCATTGGCGATGCTTCAGCCGACCGCTGCTTCGATCGCCGCTGC---GCCACGCCCGCCGTCGGTGCACCC
GGACCCCGATGCTTCCGTGGCTGAACAGCCAGCCGCGGCCGCGCGCGCTGTGCCCCGTTACGAGCGGGAGGGGCACGCAG
TGTTTATCACTGGC--------------------CATGGCGCGTCGTCGGGTGGCATGTCCGTCATCCAGCGCTTTATCT
TGACAAAAGACAGGTGCACGGTCGCGGCCATGCGGAGCTGCATCGAGTGGGAACCCGAGACATTCCCTCTGGCGGAGACG
GTCCTCGGCAAGCCGGTCATTCCCCTCGGCCTTCTGCCTCCGTCAGCCGACGGAGCCCGCCGTGCCGCCG---CCCAAGG
---AGCAGAGCACGCCACCGTGCAGTGGCTGGACGCGCAACCGCCCGACTCCGTTATATACGTCGCACTAGGAAGCGAGG
TGCCGCTGCGCGTGGAGCAGGTGCACGAGATGGCGTTCGGGCTAGAGCTCGCCGGGACGCGCTTCCTCTGGGCCTTGAGA
AAGCCCAGCGGCGCCGCCGA---CGACGACAGCGCC---GAAATGCTCCCTCCCGGTTTCGAGGACAGCACCAGCGGCCG
CGGGCTGGTGACCACGGGGTGGGTTCCCCAGATGAGCATCCTGGCGCACG--------CGGCCGTGGGCGGGTTCCTGAC
GCACTGCGGCCG-------------GA-------------GAGCCTCCTGTTCGGGCACCCTCTGGTCATGCTGCCCATC
TACGGCGACCAAGGGCCGAACGCGCGGCAGATGGAGGCGAAGCTGGTGGGGCTGCAGGTGGCGAGGAACGAGGACGACGG
GTCGTTCGACCGCCATGGCGTCTCGAGCGCCGTCCGGGCCGTCATGGTTGACGAAGAGGCCAGGAG--------------
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-----------------------------------------------------------
>chr5D_1028
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------------------TTCGGCCACATGCTCCCGTACCTGGAGCTCGCCGAGCGGCTGGCGTCGCGAGGCCACCCCGT
GTCATACGTCTCCACGCCGCGCAACCTCGCCCGCCTCCCGC---CGCTGCGCC-GGCCGCGGCGCCGCGCGTCGACCTCG
TCGCGCTCCCGCTGCCGCGCGTCGACGGCCTCCCCGACGGCGCCGAGTCCACCAACGACGTCCCCGTCGACCAGCGGGAG
CTCCACTTCAAAGCCTTCGACGGCCTCGCCGCGCCCTTCGCCGAGTTCATGGCCGCCGCGTGCGCCGATGAG---GGCAC
GAGGCCTCACTGGGTCATCGCCGACAGCTTCCACCACTGGGTCGCCGCCGCCGCCGTCCAGCACAAGGTTCGGCTCACCT
GCCGCGCGCGCTGCTCGCTTCGTTCCATTAATTCCATCCAATGCACA-------TGTCAAATCTAGCTCGATGCTCAATC
AATCAGGTGCCATGCGCGATGCTTCTCCCGACCGCTGCTG---TGATCGCTATTGCGCGCGCCGA-------GACC----
-------------------------------------------------CGCCCTCGTTACGAGCAGGAGGACATGGCTC
CCATGTACGGCGAC--------------------CAAGGCGCATCG------GGTATGTCCCTCGCCCAGCGCTGGCTGT
TGACGAAAGAGAGGTCCGCGCTCGGGGTCATCCGGAGCTGCGTGGAGTGGGAGCCCGAGTCCTTCCCGCTGGTGCAACCG
CTCCTCGGCATGCCGGTCGTGCCTCTCGGCCTTCTCCCACCGTCACCCGACGGAGGCCGTCGTGCCGGCGGCACCAATGA
ATCATCAGAGCACGCCACCGTGCGCTGGCTGGACGCGCAGTCGCCCGGCTCGGTGGTGTACGTGGCGCTAGGGAGCGAAG
TGCCGCTGCCCCTGGAGCAGGTACACGAGCTCGCCCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTCCGG
AAGCCCAGCGGCGCCGCCGTCCTAGATGACGGAGCC---GACATGCTTCCACCGGGTTTCCAAGAGCGCGCTCGCGGCCA
GGGGCTGGTGACCACGGGGTGGGTTCCTCAGATGAGCATCCTGGCGCACC--------CCGCCGTGGGCGGGTTCCTGAC
GCACTGCGGCCA-------------GAACTCGCTGATCGAAGGGCTCCTGTTCGGCCACCCACTCGTCATGCTACCCATC
TTCGGCGACCAAGGTCCGAATGCACGCCAAATGGAGGCGAAGAAGGCGGGGTTGCAGGTGGCGAGGGACGAGAGCGATGG
GTCCTTCGACCGCCATGGCATCGCGAGCGCGGTCCGGGCCGTAATGGTTGACGCAGAGGCAAGGAG--------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5A_1028
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TTCGGCCACCTCCTCCCGTACCTGGAACTCTCCGAGCGGCTCGCCGAGCGGGGCCACCGCGT
GTCCTACGTGTCCACGCCGCGCAACGTCGCCCGCCTCCCGCTCCCGCTGCGCCCCGCGGCGGCGCCGCGCGTGGACCTCG
TCGCGCTCCCGCTCCCACGCGTTGACGGCCTCCCCGACGGCGCCGAGTCCACCAACGACGTGCCCGACGACGACCGCGAA
CTCCACTGGAAGGCCTTCGACGGCCTCGCCGCGCCGTTCGCGGAGTTCCTGGCCACCGCGTGCGCCGACGAG---ACCAC
GCGGCCTCACTGGATCATCGCCGACTCTTTCCACCACTGGGCAGCCGCCGCTGCCCTAGAG-------------------
----------------------------------------------------------------------------CAC-
---CAGGTGCCATGCGCGATGCTTCTCCCGACCGCTGCGT---TGATCGCCACCTTGCCTGACCTGCCGGAGGAGCACCG
TCGA------------------------------------GCACGTGGTCTTCCCCGTTACGAGCAGGAGATGATGGACC
CGGCTTACAACAAC--------------------TATGGCATATCG------GGTATGTCCATCATCCGGCGCTTTAACT
TGACAAAAGACAGGTGCACCGTCGCGGCCATCCGGAGCTGCATCGAGTGGGAACCCGAGTCCTTCCCACTGGCGGCGACG
CTCCTCGGCAAGCCGGTCGTTCCCCTCGGCCTTCTCCCGCCGTCACCCAAGGGAGCTCGCCGTGCCGCTG---CCAAAGG
---AGCAGAGCATGCCACCGTGCGGTGGCTGGACGCGCAACCTTCCGACTCCGTTGTTTACGTCGCCCTAGGAAGCGAGG
TGCCGCTGCGCGTGGAGCAGGTGCACGAACTGGCCTTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCCCTGAGA
AAGCCCAGCGGCGCCGCTGTACACGACGAGGACGGCGTGGACATGCTTCCTCCGGATTTCCAAGAGCGCACTCGCGGCCA
GGGGCTGGTGACCAGGGGATGGGTTCCTCAGGTGAGAATCCTGGCGCACGCCGCCCGGCCGCCGTGGGCGGGTTCCTGAC
GCACTGCGGCCG-------------GAACTCGCTGATCGAGGGCCTCATGTTCGGGCACCCGCTTGTCATGCTGCCCATC
TTCAGCGACCAAGGGCCCAACGCCCGGCAAATGGAGGCGAAGAAGATGGGGTTGCAGGTGGCGAGGAATGAGGACGACGG
GTCGTTTGACCGCCACAGCGTCGCGACAGCGCTCCGGGCCGTCATGGTTGACGAAGAGGCCAGGAG--------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr5D_1578
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------AGAGGTGCACGGTCGTGGCCATCCGGAGCTGCGTCGAGTGGGAGCCCGAGTCTTTCCCGCTGGCGAAGACA
ATTCTCGGCAAGCCGGTCGTTCCCCTCGGCCTTCTGCCGCCGTCAGCCGATGCAGCCCGCTGTGCCGCCG---CCAACGG
---GGCAGAGCATGCCACCGTGCGGTGGCTGGACGCGCAACCTCCCGGCTCGGTGCTGTACGTGGCGCTGGGGAGCGAGG
TGCCGCTGCGCGTGGAGCAGGTGCATGAGCTGGCCCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTCAGA
AAAGCCAGCAGCGCCGGCGCCGCCGTCGACA---CC---GACATCCTCCCGCCGGGTTTCCAAGAGCGCACGCGTGGCCA
GGGGCTGGTGACCACGGCGTGGGTTCCCCAGATGAGCATCCTGGCGCACG--------CGGCCGTGGGCGGGTTCCTGAC
GCACTGCGGGCG-------------GAGCTCGCTGATCGAGGGCCTCCTGTTCGGTCACCCGCTCGTCATGCTGCCCATC
TTCGGGGACCAGGGGCCGAACGCGCGGCAAATGGAGGCCAAGAAGGTGGGGCTGCAGGTGGCGAGGGACGAGGACGATGG
GTCGTTCGACCGCCATGGCGTCGCGGTGGCGGTCCGGGC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr5B_1580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------AGGTGCACCGTCGCGGCCATGCGGAGCTGCATCGAGTGGGAACCCGAGTCCTTCCCATTGGCGGCGCCG
CTCCTCGGCAAGCCGGTCGTTCCCCTCGGCCTTCTGCCGCCGTCAGCCGACGGAGCCCGCCGTGCCGCTG---CCAAAGG
---AGCAGAGCATGCCACCGTGTGCTGGCTGGACACACAGCCTCCCGACTCTGTTGTTTACGTCGCCCTAGGAAGCGAGG
TGCCACTGCGCGTGGAGCAGGTGCACGAGCTGGCCTTCGGGCTAGAGCTCGCCGGGACGCGCTTCCTCTGGGCCCTAAGA
AAGCCTAGCGGTGCCGCTGTACTCGACGACGATGGCGTGGACATGCTTCCTCCTGGTTTCCAAGAGCGCACTCGCGGCCA
GGGGCTGGTGACCACGGGATGGGTTCCTCAGGTAAACATCCTAGGGCACA--------CGGCCGTGGGCAGGTTCCTGAC
GCATTGCGGCCG-------------GAACTCGCTGATCGAGGGCCTCATGTTCGGGCACCCACTTGTCATGCTGCCCATC
TTCGGCGACCAAGGGCCGAACGCGTGGCAAATGGAGGCGAAGAAGGTGGGGTTGCAGGTGGTGAGGAATCAGGACGACGG
GTCGTTCGACCGCCACGGCGTCGCGACAGCGGTCCGGGCCGTCATGGTTGACGAAGAGGCCAGGAG--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>chr5B_1595
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------GCCATGCGGAGCTGCATCGAGTGGGAACCCGAGTCCTTCCCACTGGCGGCGCCG
CTCCTCGGCAAGCCGGTCGTTCCCCTCGGCCTTCTGCCGCCGTCAGCCGACGGAGCCCGCCGTGCCGCTG---CCAAAGG
---AGCAGAGCATGCCACCGTGCGCTGGCTGGACGCGCAGCCTCCCGACTCCGTTGTTTACGTCGCCCTAGGAAGCGAGG
TGCCGCTGCGCGTGGAGCAGGTGCACGAGCTGGCCTTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCCCTGAGA
AAGCCTAGCGGTGCCGCTGTACTCGACGACGATGGCGTGGACATGCTTCCTCCTGGTTTCCAAGAGCGCACTCGCGGCCA
GGGGCTGGTGACCACGGGATGGGTTCCTCAGGTAAACATCCTGGGGCACA--------CGGCCGTGGGCGGGTTCCTGAC
ACATTGCGGCCG-------------GAACTCGCTGATCGAGGGCCTCATGTTCGGGCACCCGCTTGTCATGCTGCCCATC
TTCGGCGACCAAGGGCCAAACGCGCGGCAAATGGAGGCGAAGAACGTGGGGTTGCAGGTGGCGAGGAATCAGGACGACGG
GTCGTTCGACCGCCACGGCGTCGCGACAGCGGTCCGGGCCGTCATGGTTGACGAAGAGGCCAGGAG--------------
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>chr5B_1654
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-----CGGCAAGCCGGTGCTGCCCCTCGGCCTTCTGCCGCCGTCACCTGACGGAGGCCGCCGTGCCACCGGCACCAACGG
---AGAAGACCATGCCACCGTTCGGTGGCTGGACGCGCAGCCGCCCGGCTCGGTGGTGTACGTGGCGCTGGGGAGCGAGG
TGCCACTGCGCGAGGAGCAGGTGCGCGAGCTGGCCCTCGGCCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTCAGG
AAGCCCATCGGCGCCGTT---------------GAC---GACCCTCTCCCTCCCGGCTTCGAGAACCGCACCCACGACCG
CGGGCTGGTGGCCACGGGGTGGGTTCCCCAGATGAGCATCCTGGCGCACG--------CGTCCGTCGGCGGGTTCTTGAC
GCACTGCGGCCG-------------GAACTCGCTGATCGAGGGCCTCCTTTTCGGGCACCCACTCGTCATGCTGCCCATC
TTCGGCGACCAAGGGCCCAACGCGAGGCAAATGGAGGCGAAGAAGGTAGGGTTGCAGGTGGCGAGGGACAAGGACGACGG
GTCGTTCGACCGCCATGGCGTCGCGAGCGCCGTCCGGGCCGTCATGGTTGAGGGAGAAGAAAGGAGGAGCTTTATGGCGA
ACGCACTGAAGATGCAAGCGGTCGTAGGCGATAAGGAGCTCCAGGATAGGTACATCGACGAGTTTGTACAGCACCTCAGA
TCTTAC--------------------------------------------------------------------------
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>chr5A_1660
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-----------GCCGGTCGTGCCACTCGGCCTTCTGCCACCGTCATCCGACGGAGGCCGCCGTGCGGACGGCACCAACGG
ATCAGCAGAGCACGCCACCGTGCGCTGGCTGGACGCGCAGCCGCCCGGCTCGGTGGTGTACGTGGCGCTGGGGAGCGAAG
TGCCGCTGCCCCTGGAGCAGGTGCACGAGCTGGCCCTCGGGCTGGAGCTCGCCGGGACGCGCTTCCTCTGGGCTCTCCGG
AAGCCCAGCGGCGCCGCCGTCCTGGACGACGGCGCC---GACATGCTTCCTCCAGGTTTCCAAGAGCGCGCTCGCGGGGT
GGGGCTGGTGACCACGGGGTGGATTCCTCAGATGAGCATCCTGGCGCACG--------CCGCCGTGGGCGGGTTCCTGAC
GCACTGCGGCCG-------------GAACTCGCTGATCGAAGGGCTCCTGTTCGGCCACCCTCTCGTCATGCTACCCATC
TTCGGCGACCAAGGTCCGAATGCACGCCGAATGGAGGCGAAGAAGGCGGGGTTGCAGGTGGCGAGGGACGAGAGCGA---
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>chr1D_2719
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---------------------------------------------------------------------------TCTTT
GCCCACCACCTCCCTAGACAAACAATCTGACTACTCGCTATCTACCCGCACTGGAGCTGCCACCCCGTAGCCATCCCCGT
CACTTCTGAATAATCCAGCCGTTCTCCATAGCTTGTCTTCCTCCTCGATTCGCTGCGTGATCCGTTTGAAGGACGGAGAT
GCTCCATTGAAGACGATATCATTCCGATGCTTCCACATCATCCACATACCTACCAAGCACTTTGCTCTGGTAGATCGTTG
ATCATCAGTCCTCTCGTCTTGCCTGGTGCACCACTCACCCAAGGTTTCATTATCCCTAGTCTCAAACTCCGGCCTCCTAG
TAGCTACACCGAACCAGTGCCAAACTTGCCATGCGAAAACATAGTTAATCAACATGTGGTTCATGGTCTCCTCATGTTGA
TCACATAGTGGGCAAGCATCCTGAAGCGATAGCCCTCATTCCAACGT-------------------CGGTCCTTAATTGC
GAGCCATGCAAAGAAGCGACATTACAA-GGCGCTCTCGATTTCCATGTGAATGATGCTGT--------------------
-----------------------------------------------------------
>chr1B_2719
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---------------------------------------------------------------------------TCTTT
TCCCACCACAACCCTAGACAAGCATTCTGACTACTCGCTATCTACC-GCACTGGAGCTGCCACCCCGAAGCCATCCCCGT
CACTTCTAAATAATCCAGCCATTCTCCATAGCTTGTCTTCCTCCTCGATTCGCTCCATGATCCGTTGGAAGGATGGAGAT
GATCCATTGAATATGATATCATTCTGATGCTTCCACAGCATCCACATACCTAGCAAGCACTTTGCTCTTGTAGATCGTCG
ATCATCAACCTTCCCGTCTTGCCTGGTGCACCACTCACCCAAGGTTTCATTGTCCCTAGTCTCAAACTCCGGCCTCCCAG
TAGCTACACTGAACCAGTGCCAAACTTGCTTAGCGAAAACATAGTTAATCAACAGTTGGTTCATGGCCTCCTCATGCTAA
TCACATAGTGGGCAAGCATCCTTATGTGGTAGCCCTCATCTAGCCAATCTGTTAGAAGTCCAACACCGGTCCTTAATTGC
GAGCCATGCAAAGAAGCGACATTACAAGGGCGCTCTCGATTTCCACGTGAAT----------------------------
-----------------------------------------------------------
>SNPs
------------------------------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-------------------------------S--------------------------S----------------
--------S------S----S----------------S-----------S------------------------------
------S--------------------------------------------S----------------------------
----S----------------------S-------------S----------S----S-----------------SS-S-
S-SSSSS--SS-SS-SS-SSSS-SS-S-SS--SSS--SSSS--SSSSSSSSS---SSSS----SS-SSS-S-S-S-SS-S
S---SSSSSS-S---S-SS-SS-SSSS---SSSSSSSSSSSSSSSSSS-SSS--SSSSS-SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------------S--S-----------------S----------------------------
--------------------S-----------------------------------------------------------
-----S-----------------------------------------------------------S--------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------------S---------------------------------------------------
-------------------------------------S----------------------------S-------------
-----------------------------------------------------------------------S--S-----
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------S-----------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------S--------------------------------------------------------------------
-------------------------------------------------------------S------------------
-----------------S--------------------------------------------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
S-------S---SS--------S--S-S--------------------------------SS-S--------S--S--SS
----SS------S---S----S-------------S-S-----S--S---S-S--S--------S---------------
----S------------------------------S-------------------S----S------------S------
-S-----S----S--S--S------S----------S-----S----SS-------------------S------S--SS
-------------------------------S-S----S-SS---------S-------S--------------------
-------SS-----S-----S--------S-S-----SSS--SSSSS---------------S-----------S--S--
S-------S--------------S--S--------SS---------------SS------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_561
--------------------------------------------------------------------------------
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-------------------------------------------------------------GCTAGAAGATGGTCGAGGG
C-------------------------------------------------------------------------------
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>reverse_2778
--------------------------------------------------------------------------------
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---------------------------------------------------------TCCCCTATGAACGCACACAC---
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-----------------------------------------------------------
