>input_sequence_54196
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---------------------------------GCAGAACTCACAAACAAGCTCGCAGATATCTGCCACCACCATCGAGT
AGTTCTCCACCGTGACGCCGTGCCATCCCTCTGTGCCGG------------------------------------CATGG
AGTTCGCCGGAGAAGTCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGGCGACGGTGGTGTCCAGGCG
ACGGCGAACCATGATCAGGCGGGCCCCTTTTGCGACGACGTCACCTTCCCGGTGCTGCCACCTTCCGCGGCAGAACCACA
AGCGTACACGCAGCAGCCCATGTTCTTCCCGCAGCAGCAGCAGCAGCAGCAGGAGAATCAGCAGATGCAAGCTTACATGG
ACCTGGCACACCAGTACCTGAACTCCTGCCCGGCTGCCGACGTCCCTGAGACTGTGTTCAGGGCGCCGGAGCCGGTGATG
ATACAGTTCGGCGGCGAGCCGTCTCCTGTGACGGCGCCGTCGTCCACGCTGAGCATCTCCGTGCCGGCCAAGGGCTCGTT
CGCGTGGGCGGGGACTGCTGCCGCCGCGGCACCGCCGGCGCCAGCACCGGTGGAGGACTTCCGCAAGTACCGCGGCGTGC
GGCAGCGCCCCTGGGGCAAGTACGCGGCGGAGATCCGCGACCCCAAGCGCCGGGGCTCCCGCGTGTGGCTCGGCACCTAC
GACACCTCCGTGGAGGCCGCGCGCGCCTACGACCGCGCCGCCTTCCGGATGCGCGGCGCCAAGGCCATTCTCAACTTCCC
AAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCCTCCGCCTCCCGTACCCGCGTCCCAGACCGCCGGCGCGACGA
ACAAACGCAAGCGATCACACGAGGACGACCGCGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCCCCAAGAACGAG
GCGCCGTCGCCGTCGTCGGCCCAGGTGTCGTGGGACACGCCCTCGTCCATGTCGCGGGAGACGGCCTCCTCGACGGTGAC
GTCGGCGGCCACGACGCCGGAGGGAGGGCTTCCTCCGACGCCGTCGAGCTCGGGCTGGGAGCAGTACTGGGAGGCGCTGC
TGGGTGGCATGCCGCTGCTCTCGCCCCTGTCGCCGCACCCGGCGCTGGGGTTCCCGCAGCTCACCGTTAGTTAATTAAGA
GGAGACGGTTATTTACTGTGAATGAGCTGGGTTCAACCAATAAACAGGCTTTGTTAGTTTAGTTGACAGCCGCATGCAAC
TCTCTGCATGCTGGGACGCGTACACTTCTTTGGGACTTAATGATAGGTGTAATGTGTGCGTTTGCTAAGAGACATGAAGA
TCGGATGGATCGATGCTTGTAAAGAATAAGCAAATTTTAATTAA------------------------------------
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-----------------------------------------------------------------
>chr2A_1_TraesCS2A01G417100
ACGGGCCAAGGTCAAATCTGGCTCACACGCGTTACGTTCGGAATCGGTCTTAGCAGCTTATATACCTAAACTGTCGAGAA
GCCAAGGTTCACAAACCACCAGTTGTACACGTATATGTCTCTTGTTGTGCAACCGCGTCGGCCCGTTCATCAAGTAACTG
TGAAACGACGTATCAAGTAGAACGAGTCCATGTACGTATATCCTCTAATGGCATAGAGGACTAACCTTCATTTAACGCCA
CAGACGAGCCG------GTAGTAGTACTGGACCGTGTACTGGTGTGCGTTCACC--------------------------
------------------------------------------CACGGGTACGTGTCGCCAGCATGGGATCGTACGTGCCA
ATTAACTCGTAACACCTAGAACGATTAGTAACCTACATCATCTGCATGCATGTGCACCTGTCTTCCCATTCCATCGTTTC
GATCGCTAGTTGTGAACAATTTCCTTGCAATCTCTGAGTAGCGAGTACGTGCAGTGGGTGGGTTAAGCTGGCCGATACTG
TCATACTGACACTGCGTAGTA-----------TAAGAATGATAATACTATTGTATACTAGATCG----------------
-----------------------------------------------------------------GTTTTCTGTGTGAAT
AAAA-------AGAGGGAGACACACGCGGCCCTTCATGGCGAAGTCTGG---GTATGGGCAGCAGCCAATGGCTCCC---
-CTGCGCGTCTTATTAAATTTCTCGTAAAGTGTGACCGGAATGGTCGATGCTCTTGTCATA-----GACGTACGCGCGCC
CCTGTTCTTCATTGACACGACTC---------------------------------------------------------
--------------------------------------AGGAAAATTCTCAGCGCAGCAAATTTGAACAGGATATCTCAG
CTCATCTGGGTGCACGATCCCTGGCTAGTACTGCCT---CACGGTCCAGCGGCGCGACATGAAGGCATTCCACTCCGCGG
AAAGTGACGAGATCGAGCACGACCCCGATGCCCTAAAA--GTGGGTCCCGCGGGCGTAATCCTGTTGGTCAAATGAAATG
AAATGCCC--GAGAACATAGGCCTTCCCGTCTCCTTC------CTC--AGCTGGCCTATAAGTACGTACACCCCCACA--
----------------AATCGAACAGCACCGCAGCAGAACTCACAAACAAGCTCGCAGATATCTGCCACCACCATCGAGT
AGTTCTCCACCGTGACGCCGTGCCATCCCTCTGTGCCGG------------------------------------CATGG
AGTTCGCCGGAGAAGTCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGGCGACGGTGGTGTCCAGGCG
ACGGCGAACCATGATCAGGCGGGCCCCTTTTGCGACGACGTCACCTTCCCGGTGCTGCCACCTTCCGCGGCAGAACCACA
AGCGTACACGCAGCAGCCCATGTTCTTCCCGCAGCAGCAGCAGCAGCAGCAGGAGAATCAGCAGATGCAAGCTTACATGG
ACCTGGCACACCAGTACCTGAACTCCTGCCCGGCTGCCGACGTCCCTGAGACTGTGTTCAGGGCGCCGGAGCCGGTGATG
ATACAGTTCGGCGGCGAGCCGTCTCCTGTGACGGCGCCGTCGTCCACGCTGAGCATCTCCGTGCCGGCCAAGGGCTCGTT
CGCGTGGGCGGGGACTGCTGCCGCCGCGGCACCGCCGGCGCCAGCACCGGTGGAGGACTTCCGCAAGTACCGCGGCGTGC
GGCAGCGCCCCTGGGGCAAGTACGCGGCGGAGATCCGCGACCCCAAGCGCCGGGGCTCCCGCGTGTGGCTCGGCACCTAC
GACACCTCCGTGGAGGCCGCGCGCGCCTACGACCGCGCCGCCTTCCGGATGCGCGGCGCCAAGGCCATTCTCAACTTCCC
AAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCCTCCGCCTCCCGTACCCGCGTCCCAGACCGCCGGCGCGACGA
ACAAACGCAAGCGATCACACGAGGACGACCGCGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCCCCAAGAACGAG
GCGCCGTCGCCGTCGTCGGCCCAGGTGTCGTGGGACACGCCCTCGTCCATGTCGCGGGAGACGGCCTCCTCGACGGTGAC
GTCGGCGGCCACGACGCCGGAGGGAGGGCTTCCTCCGACGCCGTCGAGCTCGGGCTGGGAGCAGTACTGGGAGGCGCTGC
TGGGTGGCATGCCGCTGCTCTCGCCCCTGTCGCCGCACCCGGCGCTGGGGTTCCCGCAGCTCACCGTTAGTTAATTAAGA
GGAGACGGTTATTTACTGTGAATGAGCTGGGTTCAACCAATAAACAGGCTTTGTTAGTTTAGTTGACAGCCGCATGCAAC
TCTCTGCATGCTGGGACGCGTACACTTCTTTGGGACTTAATGATAGGTGTAATGTGTGCGTTTGCTAAGAGACATGAAGA
TCGGATGGATCGATGCTTGTAAAGAATAAGCAAATTTTAATTAAGGATGTGATATTTGCTGTAAATGGATTGAAGTTACA
TTTATACTGTATGTTTTTTTTCTTTTGCATGGTACATTTATACTGTATGTGATACTACAATGATCTTAAGGGAGACCGGT
CAAATTAATTTGCAGAAAATACGGTGTGATCTTATATAATTTTGTTTGGTGCATATGGTTATATACAAGGAAAAAATAGT
AAGTTCTAAAAAAAAGTAAAATAGTGGGAAATGGCAAACAGAATTTTG-TTTGGAAATGCTATCGGTAATATCGATGCCA
AAACCGCCGCCTTTTCGTGCCTTG--CACTCTCGTGGTGTTTCCACGTAAATGCTAC-------TATGTTTCTACTCTGA
TGTTTGCTAATT------------------------------------ACTGAATCACTAACATGGGCGGCGAATACTGT
AATTCATAGCAAGGGACACAATCACCAGTAAGCAAAGGACAAAAGAACACGCAGAGAAGTCGTCCAGATAGGGCTTCAAG
CCGAGTTTTCGTAGCTTACACTTGATGTGTGTGATTCTAGATTGCTTGAGCA-TTGACCCCATGCCCTAGACTGCATTTA
ATGAGCATCTTTTTTGTTATGCGTTCGACCTTATCCACGTTCAATTCACTGCTTTTCCTGGTCAAAACCAGCAGTACTAT
TGTAACTGATTCTGT------TATATGATCTCCCTCCC--CTCCCAAGCAATGCGCATGCATGCAGGAACTTTCAACGGT
ATACC------CAACATGCATGCACCCTTTGATTTGATCCTTATTTTTGTAATCTCACACATACGTAATCTTAGATTCGC
AGGGTACTTAGCTCCACGTACGTACGTACGTAATCTCAGTTTCGAGCGATGAGAACAATGCGGCGAACCAACCTGTGGTT
GGATGGTTAGATGGACTGTGGTATCCCCAGCCCACCAGGGTTCAAGTCCTGGTGCTCGGATTTCCGGCGATGCGCATTTA
GTGGGAGGAGACGTTCCCGTCGACGACGAGACGCTTACGGTGACTTCGTAAATTTCAAGATGATA
>chr2D_39
--------------------------------------CGGAATCGGTCTTAGCAGCTTATACCCAAATTGACGT--GAA
GCCAAGGTTCACAGACCACCAGTTGTACACGTATATGTCTGTTTTTGTGCAACCGCGTCGGCCCGTTCATCAAGCAACTG
TGAAAGGACGTATCAGGTAGAACGAGCCCAT----GTATATCCTCTAATGGCATGGAGGACTAGACTTCATTTAACGCCA
CAGACGAGCTTGTAGCTGTAGTAGTACTGGACCGTGCATGTACCGTGTCCACTGCATTGATATGCATGGCAACGGGCTAG
TTTAATTTGGTTCGCCAATTTGTGCTATGCTGGTGCCATGCTCACGGGTACGTGTCGCCAGCATGGGATCGTACGTGCCA
ATTAACTCGTAACACCTAGAACGATTAGTAACCTACATCATCTGCATGCATGTGCACCTGTCTTCCCATTCCATCGTTTC
GATCGCTAGTTGTGAACAATTCCCTTGCAATCTCTGAGTAGTGAGTAC-----GTGGGTGGGTTAAGCTGGCCGATACTG
TCATACTGACACTGCGTAGTA-----------TAAGAATGATACTGCTATTGTATATATAC-------------------
----------------------------------------------------------TATATCCGTTTTCTGTGTGAAT
AAAA-------AGAGAGAGACACACGCGGCGCTTCATGGCGAAGTCTGG---GTATGGGCAGCAGCCAATGGCTCCC---
-CTGCGCGTCTTATTAAATTTCTCGTAAAGTGTGAGCGGAATGGTCGATGCTCTTGTCATGGACCGGACGTATGCGCGCC
CCTGTTCTTCATTGACACGACTC---------------------------------------------------------
--------------------------------------AGGAAAATTCTCAGCGCAGCAAATTTGAACAGGATATCTCAG
CTCATCTGGGTGCACGATCCCTGGCTAGTACTACTGCTCCACAGTACAGCGGCGCAACATGAAGGCATT-----CCACGG
AAAGTGACGAGATCGAGTACGACCCCTAAGCCCTAAAAAAGTGGGTCCCGCGGGGGTAATCCTGTTGGTCAAATCAAATG
AAATGCCC--GAGAGCATAGGCCTTCCCGTCTCCTTC------CTC--AGCTGGCCTATAAGTACGTACACCCCCACA--
----------------AATCGAACAGCACCGCAGCAGAACTCACAAACAAACTCGCAGATATCTGCCACTGCCATCGAGT
AGTTCTCTACCGTGAGGCCGTGCCATCCCTCTGTGCCGG------------------------------------CATGG
ATTTCGCCGGAGAAGTTGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGGCGACGGCGGTGTCCTGCCG
ACGGCGAACCATGATCCGGCGGGCCCCTTTTGCGACGACGTCACCTTCCCCGTGCTGCCACCTTCCGCGGCGGAACCACA
AGCGTACCAGCAGCAGCCCATGTTCTTCCCGCAGCAGGAGCAGCAGCAG------AATCAGCAGATGCAAGCTTACATGG
ACCTGGCACACCAGTACCTGAACTCCTGCCCGTCTGCCGACGTCCCTGAGGCTGTGATCAGGGCGCCGGAGCCGGTGATG
ATACAGTTCGGCGGCCAGCCGTCTCCTGTGGCTGCACCGTCGTCCACGCTGACCATCTCCGTGCCGGCCAAGGGCTCGTT
CGGGTGGGCGGCGACTGCTGCCGCCCCGGCACCGTCGGCGCCAGCACCGCTGGAGGACTTGCGCAAGTACCGCGGCGTGC
GGCAGCGGCCCTGGGGCAAGTACGCGGCGGAGATCCGCGATCCGAAGCGCCGGGGCTCCCGGGTGTGGCTGGGCACCTAC
GACACGTCCGTGGAGGCCGCACGCGCCTACGACCGCGCCGCCTTCCGGATGCGCGGCGCCAAGGCGATTCTAAACTTCCC
AAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCCTCCGCCTCCCGCTACCGCGTCCCAGACCGCCGGCGCGACGA
ACAAACGCAAGCGATCACACGAGGAGGACCGCGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCCCCAAGAACGAG
GCGCCGTCGCCGTCGTCCGCCCAGGTGTCTTGGGACACGCCCTCGTCCGTGTCGCGGGAGACGGCCTCCTCGACGGTGAC
GTCGGCGGCCACGGCGCCGGAGGGAGGGCTTCCTCCGACGCCGTCGAGCTCGGGCTGGGAGCAGTACTGGGAGGCGCTGC
TGGGCGGCGTGCCGCTGCTGTCGCCCCTGTCGCCGCACCCGGCGCTGGGGTTCCCGCAGCTCACCGTTAGTTAATTCAGA
GG---CGGTTAATTGCTGTGATTAAGCTGGGGTTAACCAATAAACAGGCTTTGGTAGTTTATTTGACAGCTGCATGCATC
TCTCTGCATGCTGGGACGCGTACACTTCTTTGGGGCTTAATGATAGGTGTAATGTGTGCGTTTGCTAAGAGACACGAAGA
TCGGATCGACCGATGCTTGTAAAGAATAAGCAAATTATAATTAAGGATGTGATATTTGCTGTAGATGGATTGAAGTTACA
TTTGTTTAGTGAAGTTACTCCTAGCAAATTATAACTACGGATGTGATATTTGCTGTAAATGGGCATTGCTTGGGAGTATA
TGAAT-----------------------------TTTAATCAGTTTTAATTTACAAGGTTATATACTACAGTAGAAC---
--------AAAAAAAACAGCAAAACGGAAAGTGGCAGACGGAACTATGTTTTGGAAATAATATCGGTAATATCGACGCCA
AAAGCGCCGCCTTTTTGCGCCTTGCACACTCCCGTGGTGTTTCCACGTAAATACTACACGTACGTATGTTTCTGCTCTGA
TGTTAGCTAATTCCATCAGACGTACAAAGATATCTAAGTGCCTGGATCACTGAATCGCCAGCATAGGCGGGCGAA----T
AATTGACGGCAAGGAACACAAACATCAGTAAGCAAAGGACAAAAGAACACGCAGAGAAGTCCTCCAGATAGG----CAAA
CTGAGTTTTCGTAGCTTACACTTGATGTGTGTGATTCTAGATTGCTTGAACA-TTGACCCCATGCCCTAGACTGCATTTA
ATGAGCATCTTTTTTGTTATGCGTTCGACCTTATCCACGTTCAATTCACTGCTTTTCCTGGTCAAAACCAGCAGTACTAT
TGTAACTGATTCTGGTAGTA-TATATGATCTCCCTCCCAACTCCCAAGCAATGCATATGCATGCAGGAACTTTCAACAGT
ATAGTACGACACAACATGCATGCA--------------------------------------------------------
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>chr2B_286
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---------------------------------------------------ACC--------------------------
------------------------------------------CACGGGTACATGTCGCCAGCATGGGAAGTGACGA----
---AACTCGTAACAGCTAGGACGATTAGTAACGTCAGCACCTCA---------GCAACTGTCTTCCCATTCTATCGTTTT
GATCGCTAGTTGTGAACAATTTCCTTGCAATCTCTGAGTAGTGAGTAC-----GTGGGTGGGTTAAGCTGGCCGATACTG
TCATACTGACACTGCCTAGTAGTATAAGAAATTAAGAATGATACTAGTATTGTACTCCCTCCGTTCCAAAATAGATGACC
CAACTTTGTATTAACTTTAGTATAAAGTTGGGTCATCTATTTTGGGACGGAGGGAGTATATATCCGTTTTCTGTGTGAAT
AAAA-------AGAGAGAGAAACACGCGGCGCTTCATGGCGAAGTCCGG---GTATGGGCAGCAGCCAATGGCTCTC---
-CTGCGCGTCTTATTAATTTTCTCGTAAAGTGTGAGCGGAATGGTCGATGCTCTTGTCATGGACCGGACGTATGCGCGCC
CCTGTTCTTCATGGACACGACTC---------------------------------------------------------
--------------------------------------AGGAAAATTCTCAGCGAAGCAAATTTGAACAGGATATCTCAG
CTCCTCTGGGTGCACGATCCCTGGCTAGTACTGCCTG---ACAGTAGAGCGGCGCAACATGAAGGCATTCCACTCCACGG
AAAGTGACGAGATCGAGTACGACCCCTAAGCCCT--AAAAGTGGGTCCCGCGGGGGTAATCCTGTTGGTCAAATCACATC
AAATGCCAGAGAGAACATAGGCCTTCCCGTCTCCTTC------CTCTCAGCTGGCCTATAAGTACGTCCACCGCCACCGC
GCTTTGTCCTCAGGAGAATCGAACAGCACCACAGCAGAACTCACAAACAAACTCACAGACCTCTGCCACCGCCATCGAGT
AGTTCTCTACCGTGCGGCCGTGCCATCCCTCTGTGCCGG------------------------------------CATGG
ATTTCGCCGGAGAAGTCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGGCGACGGGGGTGCCCTGGCG
ACGGCTAACCATGATCAGGCGGGCCCCTTTTGCGACGACGTCACCTTCCCCGTGCTGCCACCTTCCGCGGCGGATCCACA
AGCGTACCAGCAGCAGCCCATGTTCTTCCCGCAGCAGGGGCAGCCGG------------AGCAGATGCAAGGTTACATGG
ACCTGACCCACCAGTACCTGAACTCCTGCCCTTCTGCCGACGTCCCTGAGGCTGTGTTCAGGGCGCCGGAGCCGGTGATG
ATACAGTTCGGCGGCGAGCCGTCTCCTGTGATAGCGCCGTCGTCCACGCTGACCATCTCCGTGCCGGCCAAGGGCTCGTT
CGGGTGGGCGGGGACTGCTGCCGCCGTTGCACCGCCGGCGCCAGCACCGGTGGAGGACTTCCGCAAGTACCGCGGCGTAC
GGCAGCGCCCCTGGGGCAAGTACGCGGCGGAGATCCGCGATCCCAAGCGCCGGGGCTCCCGGGTGTGGCTGGGCACCTAC
GACACGTCCGTGGAGGCCGCGCGCGCCTACGACCGCGCCGCGTTCCGGATGCGCGGCGCCAAGGCCATTCTTAACTTCCC
GAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCCTCCGCCTCCCGCTCCCGCGTCCAAGACCGCCGGCGCGACGA
ACACACGTAAGAGATCACATGAGGAGGACCCCGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCCCCAAGAACGAG
GCGCCGTCGCCGTCGTCGGCCCAGGTGTCGTGGGACACGCCCTCGTCCGTTTCGCGGGAAACAGCCTCCTCGACGGTGAC
GTCGGCGGCCACGACGCCGGAGGGAGGATTTCCTCCGACGCCATCGAGCTCGGGCTTGGAGCAGTACTGGGAGGCGCTGC
TGGGCGGCATGCCGCTGCTCTCGCCCCTGTCGCCGCACCCGGCGCTGGGGTTCCCGCAGCTCACCGTTAGTTAATTACGA
GG---CGGTTAATTGCTGTGAATCAGCTGGGGTTAACCAATAAACAGGCTTTGGTAGTTTAGTTGACAGCCGCATGCATC
TCTCTGCATGCTGGGACGCGTACACTTCTTTGGGGCTTAATGATAGGTGTAATGTGTGCGTTTGCTAAGAGACACAAAGA
TCGGATCGACCGATGCTTGTAAAGAATAAGCAAATTATAATTAAGGATGTGATATTTGCTGTAGATGGATTGAAGTTACA
TTTGTTTAGTGAAGTTACTCCTAGCAAATTATAACCAAGGATGTGATATTTGCTGTAAATGGGCATTGCTTGGGAGTATA
TGAA---------------------------------------TTTTAATTTACAAGGTTATA--CTATAGAAGAAG---
--------AAAAAAACCAGCAAAACGGAAAGTGGCAGACGGAACTATGTTTTGGAAATAATATCGATAATATCGACGCCA
AAAGCGCCGCCTTTTTGCGCCTTGCACACTCCCGTGGTGTTTCCACGTAAATACTATACGTACGTATGTTTCTGCTCTGA
TGTTTGCTAATT-CATCAGACGTACAAAGATATGTAAGTGCCTGGATCACTGAATCGCCAACATAGGCGGGTGAA----T
AATTGACAGCAAGGGACACAAACATCAGTAAGCAAAGGACAAAAGAACACGCAGAGAAGTCCTCCAGATAGGGCTTCAAG
CTGAGTTTTCGTAGCTTACACTTGATGTGTGTGTTTCTAGATTGCGTGAACGTTTGACCCCATGCCCTAGACTGCATTTA
ATGAGCATCTTTTTTGTTATGCGTTCGACCTTATCCACGTTCAATTCACTGCTTTTCCTGGTCAAAACCAGCAGTACTAT
TGTAACTGATTCTGGTAGTAGTATATGATCTCCCTCACAACTCTCAAGCAATGCATATGCATGCAGGAACTTTCAACAGT
ATAGT---ACACAACATGCATGCACCCTTTGATTTGATCCTTATTTTTATAGTC--------------------------
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>chr2D_504
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-----------------AGTA-----------TAAGAATGAAACT---ATTGTATATATATTCC----------------
-----------------------------------------------------------------TTTTTGTGTACGAGG
AAGAGAGAGAGAGAGAGAGAAACACGCAACGATTCATGGCAAGCTCTGGTATGTACGGGCAGCAGCCAATAGCTAGCTTT
TCTGCGCGTCATATTAAATTTCTTGTAAAGTGTGAGCGGAATGGTCGAAGCTCTTGTCATGGAT-----GTATGCGCGCC
CCTGTTCTTCATTGACACGACTCCGAAAATATCTTGCCATGTACTAGCAAGTCAAAATTATCAACTGCCTACATGTTTGA
GTTTGACAACGAAAATGCCCACAAATTGCACATGTACCAGTAAACATCTCAGCGCAGCAAATTTGAATAGGATG------
------TGGGTGCAAAATCTCAGGTACTACAGCATAACA--------------GCGACATGAAGGCATG-----CCACGG
AAAGTGACGAGATCGAGTACGACCCCGATGCCTCAG--AAGTGGGTCCCGCGTTCAT-----------------------
--------------ACATAGGCCTTCCCGTCGGATCTCCTTCTCTCTCAGCTGGCCTATAAGTGCT--------------
--TTTGTCCTCAAGGAATATCACAG-------------ACCCACAGACAAACTTACCACTGG-------CACCGAGTAGC
ACTTCTCTACCGTGCCGCCATCTCTCTTTCTTTCTCACGATTCTCATCGACTGAAAGGCGAACCGTAATAAGCACCATGG
AGTTCGCCGGAGAAGCCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTGCTCGGCGGCGACGGTGGTGTCCTGGCG
ACGGCTAACCATGAGCA---GGGCCCTTTTTGCGACGACGTCACCTTCCCCGTGCTGCCACCTTCCGCGGCCGAACCGCA
AGCGTAC---CAGCAGCCCATGTTCTTCCCGCAGCAGGGGCAGCGGCAG------GAACAGAC---GCAAGGTTACATGG
GCCTGACGCACCAGTACGTGAACTCATATCCGGCTGCCAC---------GGCGGTGTTCCGTGCGCCGGAGCCGGTGATG
ATACAGTTCGGCGGCCAGCCGTCTCCTGTGAGGGCGCTGTCGTCCACGCTGACCATCTCGGTGCCGCCCCAGGGCACGTT
CGGATGGGCGGGGACTGCTGCCGCCGCAGCGCCA---GCGCCAGCACCGGTCGAGGACCTCCGCAAGTACCGCGGCGTCC
GGCAGCGACCGTGGGGCAAGTACGCGGCGGAGATCCGCGACCCAAAGCGCCGGGGCTACCGCGAGTGGCTCGGCACCTAC
GACACCTCCGTGGAGGCCGCGCGTGCCTACGACCGTGCCGCCTTCCGGATGCGCGGCGCCAAGGCCATTCTTAACTTTCC
AAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCGGCCGCCTGCTGGCCCGGCGTCCCAGGCAGCAGGCGCGACGA
ACAAACGTAAGAGATCACAGGGCGAGGACGCTGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCGTGAGGGCCGAG
GCGCCGTCGCCGTCGTCGGCCCGGGTGTCGTGGGACACGCCCTCGTCCTTGTCGCGGGGGACAGCGTCTTCGACGGTGAC
GTCGGTGGCCACGACGCCGGAGGGAGAGTTTCCTCCGACGCCGTCAAGCTCGGGCTGGGAGCAGTGCTGGGAGGCGCTGA
TGGGAGGCATGCCGTTGCTGTCGCCCCTGTCGCCACACCCGGCGTTGGGTTTCCCGCAGCTTAGTGTTAGTTAATTAAAG
GA------------------------------------------------------------------------------
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>chr2A_1087
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---------------------------------------------------------------------------CATGG
AGTTCGCCGGAGAAGTCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGCCGACGGCGGTGTCCTGGCG
ACGGCTAACCATGATCA---GGGCCCCTTTTGCGACGACGTCACCTTCCCCGTGCTGCCACCTTCCGCGGCCGAACCGGA
AGCGTACCTGCAGCAGCCCATGTTCTTCCCGCAGCAGGGGCAGCGGCAG------GA---GCAGATGCTGGGTTACATGG
ACCTGACGCACCAGTACGTGAACTCATATCCGGCCGCCCC---------GGTGGTGTTCCGGGCGCCAGAGCCGGTGATG
ATACAGTTCGGGGGCGAGCCTTCTCCTGTGAGGGCGCTGTCGTCCACGCTGACCATCTCGGTGCCGCCCCAGGGCACGTT
CCGGTGGGTGGGGACGGCTGCCGCCGCAGCGCCA---GCGCCGGCGCCGGTCGAGGACCTCCGCAAGTACCGCGGCGTAC
GGCAGCGGCCATGGGGCAAGTACGCGGCTGAGATCCGCGACCCAAAACGCCGGGGCTCCCGCGTGTGGCTCGGCACCTAC
GACACCTCCGTGGAGGCCGCGCGTGCCTACGACCGCGCCGCCTTCGGGATGCGCGGCGCCAAGGCCATTCTTAACTTTCC
GAACGAGGTCGGCACCCGCGGCGCCGAGCTGTGGGCGCCGCCGCCTTCCGGTCCGGCGTCCCAGACAGCAGGCGCGACGA
ACAAACGTAAGAGATCACAGGACGAGGACGCTGACGTCGAGGTGACCGGAGTGGTAATAAACAAGGCCGTGAAGGCCGAG
GCGCCGTCGCCGTCGTCGGCCCGGGTGTCGTGGGACACGCCCTCGTCCGTGTCGCGGGGGACAGCGTCTTCGACGGTGAC
GTCGGTGGCCACGACGTCGGAGGGAGGGTTTCCTCGCACGCCGTCGAGCTCGGGCTTGGAG---TACTGGGAGGCGCTGA
TGGGAGGCATGCCGTTGCTGTCGCCCCTGTCGCCACACCCGGCCTTGGGTTTCCCGCAGCTTAGTGTTAGTTAATTGAAG
GA------------------------------------------------------------------------------
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>chr2B_1087
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---------------------------------------------------------------------------CATGG
AGTTCGCCGGAGAAGTCGACGACTTCGCTCTCGACCTCATCCGCGAGCACCTCCTCGGCGGCGACGGCGGTGTCCTCCCG
ACGGCTAACGATGATCA---GGGCCCTTTTGGCGACGACGTCACCTTCCCCGTGCTGCCACCTTCTGCGGCCGAGCCGGA
AGCGTAC---CAGCAGCCCATGTTCTTCCCGCAGCAGGGGCAGCGGCAG------GTACAGAC---GCAAGGTTACATGG
GCCTGACGCACCAGTACGTGAACTCATATCCGGCTGCCGC---------GGCGGTGTTCCGAGCGCCGGAGCCGGTGATG
ATACAGTTCGGTGGCGCGCCGTCTCCTGTGAGGGCGCTGTCGTCCACGCTGACCATCTCGGTGCCGCCCCAGGGCACCTT
CGGGTGGGCGGGGACGGCTGCCGCCGCAGCGCCA---GCGCCAGCGCCGGTCGAGGACCTCCGCAAGTACCGCGGCGTCC
GGCAGCGGCCATGGGGCAAGTACGCGGCGGAGATCCGCGACCCAAAGCGCCGGGGCTACCGCGAGTGGCTCGGCACCTAC
GACACCTCCGTGGAGGCCGCGCGTGCCTACGACCGTGCCGCCTTCCGGATGCGCGGCGCCAAGGCCATTCTTAACTTTCC
AAACGAGGTCGGCACCCGCGGCGCCCAGCTGTGGGCGCCGCCGCCTGCTGGCCCGGCGTCCCGGGCAGCAGGCGCGACGA
ACAAACGTAAGAGATCACAGGACGAGGACGCTGACGTCGAGGTGACCGGAGTGGTCATAAACAAGGCCGTGAAGGCCGAG
GCGCCGTCGCCGTCGTCGGCCCGGGTGTCGTGGGACACGCCCTCGTCCGTGTCGCGGGGGACAGCGTCTTCGACGGTGAC
GTCGGTGGCCACGACGCCGGAGGGAGGGTTTCCTCACACGCCGTCGAGCTCGGGCTTGGAG---TACTGGGAGGCGCTGA
TGGGAGGCATGCCGTTACTGTCGCCCCTGTCGCCACACCCGGCGTTGGGTTTCCCGCAGCTTAGTGTTAGTTAATTAGAG
GA------------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------SS-SS-SSSSSSSSS---
-------------S--------------------------S--S------------------------------S-----
-----S---------S----------S----SSSS-------------------S--------SS---------------
---------SS-------------------------S-SSSSSSSSSSSSS-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------SSSSS---------------------------
-------------------------------------------S-------------SSSS--S----------------
--------------------------------------------------------------------------------
---------------S--------------S-------------------------------------------------
-----------------------------------S------------------------S-----------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--S------------------------------S---
-----------------S--------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------S------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------S--------------------S--------
-------SS----------------------------S-----------SSSSSS-------------------------
--------------------------------------------------S-----------------------------
----------------------------------------------------S---------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------SS----------------------------
-------------------------S------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--SSS------S--S--------S-------S-S-------------------S------------------------S-
----------------------------------S---------------------------------------S-----
------S--S--------------------------S--------------------------S----------------
---S-SSS--SSSS--SS-SSSSSSSSSS-SSS--SSSSSSSS--SSSS-SSSSS--S-SS-SSS--SSSS-S--SSSSS
SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S----SSSS---SS-SS-S-S----------S-SSS--S--SSSS
SSSSSSSS-------SS-SS-S-SS--S--S-----S--S---S-S------------SS---------------S----
---S-----------S-S-------------S--------------------S--------------------S------
--------------------------------------------------------S-S-----S-----SSS-SSSSS-
----S-S--------------S--S------------------------------------S------------------
-S-----------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------------SS---------------------S--
---SS-------------------------------------------S--S--SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_34
--------------AATCTGGCTCACACGCGTTA----------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_2072
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CAACTTCCC
AAACGAGGTCG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_1086
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCTAGTACTGCCTCACGGTC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ACTAACATGGGCGGCGAATA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
