>input_sequence_54194
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----------ATGCCAATCACCCAAAGGGC--------------------------------------------------
-----------------------------------------------------CTCACCGATGCTTCCGAACTCGAGAGC
CCGCCACCGGCGCGACCCGAGCAAGCTCCTCTACAAGCCGCGGCCGCCGCCGGAGCCGCACCCGTTCCTGCTCCACCTCA
AGTCGCTCCCTTCCCCGGTCGCCGCGGCGGCCGCGCTCCTCTCGGCGCCGCGCCGCCTCCACGACCACCCCTTCGCCTCC
TGCGTGCTCTACCGCCTCGCCCGCGCGCGCCTCTTCCCGCTCCTCCTCCCGCTCCTCTCCGCGCTCCGCGCCCGCCGCGC
CCCGCTCCGCGCCACCGTCTTCGCGGGGCTCATCGACCGCCTCGGCGCCGCCTCCCGCCCCGACGCGGCTCTCCTCGTCT
TCTTCCGCGCCGTGCCCGCCTTCTGCTCCCACTCCAACGCCACCTTCCACGCGCTGATCCACTGCCTCGTCTGCAACGGC
CGCGTGGACGCCGCCCGGAACATGCTCCCCCGGGCCGCCAAGCTCGGCGTCCGCCCCAACGCCGTCTCCTACAACATCAT
CCTCAAGGGGCTGTGCGGCCGGGACGGGTCCGCGGGCGCCCGCGTGGTGCTCGACGAAATGCTCGGCCGCGGCGTCCGGC
CCACGGTGGTCACCTTCAACACCCTGGTCGGGGCGGCGTGCCAGGAAGGGGACGTGGGCGCCGCGGAGCGGCTCAAGGAA
GAGATGGTGCGCCGGGGCGTCTCGCCGAACGCCGTGACATACTCCCTCCTGATGCGGGGCCTGTGCGACGCCGGTCGGCT
GGACGACGCCAAGAAACTGATGTTCGACATGGAGTACCAGGGCTGCCAGACCGAGGCGGTGAACTACGGCGTGCTGATGA
GCGCCTACGCGAGGCAGGGTGACGTCGACGCCATCAAGGGGCTGCTCTCCGACATGCGCAAGCGCAAGCTCGGGCCCGAC
GACGCGAGCTACAACGTCCTGATCAAGTGCCTGTGTGACAGCGGCAGGGTGGAGGAAGCGCACAAGGCGCTCGTCGAGAT
GCAGCTCAAAGACGGCACGGCGCCAAGCGCGGCGACGTACCGCGTCCTGGCCGACGGGTGCTGCAGAGCCGGCGATTTCG
GGTTGGGGCTACGGGTTTTCAACGCCATGCTGTCCAGCGGGCATCGTCCCCTAGGTCACACCTTCAAGCACCTGGCGAAA
GGGCTCGGCGAGGACGGCAAGGCGGAGGAAGCCTGCTTCGTCTTGGAGAAGATGGCGGAGAGTGGGATTTGGATGGATGC
AGAAGGGTGGCGGTCTCTTGCTACATGCGTCTGCAGCGGCGGTGCAGGTGAGGTGAAGCTCGTCGATGAGCTAGCGTTGT
CATCTTGA------------------------------------------------------------------------
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--------------------------
>chr1A_1_TraesCS1A01G368700
GGGATGTTGCGACCGTTGTCGCGAGATGCCGGAGCCGACCGACAGAGGAGCTGTAATCGGCCACATGGGGAGACTGCAAC
CAACAGCAGCCTTGCTATGGCATCTTTTTCGTAGCAAGAGC-CGCAATCGTGCTCGATGGAGCTGCAACCGATGAATTGG
GGAAGACAGTGAGGGACGATCGTCGTTGCGGTGAGCACGTACCGCAAGGTGATGTCGGTGCTGCCGCTAGCTCAAGGGGT
GAGGCAGTGTTGCAGGGCTTCGACAACGATTGATGTGATGTAAGCGGTGGTGGGACAGTGTTGCCGCTATACCCAAGCAC
ATACGTAGGAACTTTGACACGGTGGTTATCTTGCTGCACTGGAGGATATGGAAAGAAAGAAATTCCAGAATTTTTGATCA
TGTGGCATACTCGCCGATCGGCGTCTTGGAGCGGATACAAGAAGATGTGGCCATGTGGTGGGCCGCCGGATGCATCGTAG
ATCTGCCAACTTAGCTGTTGCTGGGGCGTTTCTGTTTTGGAAGGCTGGTCCTCCGCAGAGTTGTATTGGGAACTCTGAGT
TCAATCTAAGCTTCCTAGACTGTTCATGATGTAACTCTCTTCCCTATCTAATAAAGATCGGCCAACGGCCCTTCGAGATG
TAAGCGGTGGCGGGAGGGGGTGCATCCGGCCCGCAAGGGTGCCACGCCCGGCGCGCATGGGAAGCCCT-CGAGATGTCTC
TCCCCAATGCCTCGATGGGGCGGTGGCAGCTCGTCGGTGCTTCCATGCTAGTGGAAGGATGCGCGGCG----------GA
GCAGTGGGGCCGTATCGTGGCGATTTGGGGCGAGGACGGATGAGGTGGAGAGCAGAGCAAGGCGAAGCGAATGGAGCTGT
GGAAAACTACGAGCACGTGGTGAAAGGGCGAAGAGATAATCCAACGATCCATGTTCCATCGTG-------------CGGC
GACCGGGCAAAATTTTGGCCGGTCGACCAACTCGACG---CTAGTCACCCATAAACAAAA--------------------
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--CAAGGGGAATGCCAATCACCCAAAGGGC--------------------------------------------------
-----------------------------------------------------CTCACCGATGCTTCCGAACTCGAGAGC
CCGCCACCGGCGCGACCCGAGCAAGCTCCTCTACAAGCCGCGGCCGCCGCCGGAGCCGCACCCGTTCCTGCTCCACCTCA
AGTCGCTCCCTTCCCCGGTCGCCGCGGCGGCCGCGCTCCTCTCGGCGCCGCGCCGCCTCCACGACCACCCCTTCGCCTCC
TGCGTGCTCTACCGCCTCGCCCGCGCGCGCCTCTTCCCGCTCCTCCTCCCGCTCCTCTCCGCGCTCCGCGCCCGCCGCGC
CCCGCTCCGCGCCACCGTCTTCGCGGGGCTCATCGACCGCCTCGGCGCCGCCTCCCGCCCCGACGCGGCTCTCCTCGTCT
TCTTCCGCGCCGTGCCCGCCTTCTGCTCCCACTCCAACGCCACCTTCCACGCGCTGATCCACTGCCTCGTCTGCAACGGC
CGCGTGGACGCCGCCCGGAACATGCTCCCCCGGGCCGCCAAGCTCGGCGTCCGCCCCAACGCCGTCTCCTACAACATCAT
CCTCAAGGGGCTGTGCGGCCGGGACGGGTCCGCGGGCGCCCGCGTGGTGCTCGACGAAATGCTCGGCCGCGGCGTCCGGC
CCACGGTGGTCACCTTCAACACCCTGGTCGGGGCGGCGTGCCAGGAAGGGGACGTGGGCGCCGCGGAGCGGCTCAAGGAA
GAGATGGTGCGCCGGGGCGTCTCGCCGAACGCCGTGACATACTCCCTCCTGATGCGGGGCCTGTGCGACGCCGGTCGGCT
GGACGACGCCAAGAAACTGATGTTCGACATGGAGTACCAGGGCTGCCAGACCGAGGCGGTGAACTACGGCGTGCTGATGA
GCGCCTACGCGAGGCAGGGTGACGTCGACGCCATCAAGGGGCTGCTCTCCGACATGCGCAAGCGCAAGCTCGGGCCCGAC
GACGCGAGCTACAACGTCCTGATCAAGTGCCTGTGTGACAGCGGCAGGGTGGAGGAAGCGCACAAGGCGCTCGTCGAGAT
GCAGCTCAAAGACGGCACGGCGCCAAGCGCGGCGACGTACCGCGTCCTGGCCGACGGGTGCTGCAGAGCCGGCGATTTCG
GGTTGGGGCTACGGGTTTTCAACGCCATGCTGTCCAGCGGGCATCGTCCCCTAGGTCACACCTTCAAGCACCTGGCGAAA
GGGCTCGGCGAGGACGGCAAGGCGGAGGAAGCCTGCTTCGTCTTGGAGAAGATGGCGGAGAGTGGGATTTGGATGGATGC
AGAAGGGTGGCGGTCTCTTGCTACATGCGTCTGCAGCGGCGGTGCAGGTGAGGTGAAGCTCGTCGATGAGCTAGCGTTGT
CATCTTGACATTTCCAGTCCATGTGAGGCTTTGACAGCCTTCAGCTGTGGCATTTCCATTTGTCTA--------------
--------TTCTCTTTATCTTGCTTCAGTTCCAGAAGCATTTAGTTGTGCAAGGCAAAATGCATAATGATA-TGGGTATA
ATGGCAGATAAAAGATGCGAGTCTTACTGCTGAAAG------------------------TGAAGTTCGTCAGTTTATTT
CAAGTTAGAAATCTGTGTGCAGTTTATCAATCTTTCCATACCACTTTCAGAACTGTCGTT-----TTTTAAAATGGTCAC
CGGGGGAGGAATCGCCACCTGT--ATATCGATCTCATTTCGGAAAGAATGATCCGGTTTATGTAAGAAACCGAATCGAAA
ACCTTTTTTT---CCAACCGGGCTCGCACCCCTTTCCACTAATTTTGCAATCAATGGAAATACATCAGTCTGTTTTGAAT
CAAAAACCATTGATTCAGTTTAC-ATGAGAAACCGAAACCAAATCAAAAACCTTAACAATGCTGAGGGGCAAGCCTGGCT
GGCCGAGCATGCACCAGGGAGAAGCGTCGCTTTAACGCCAGCGAGAACAAGTGATGGTGATTAAGTGATATGATCGTAGA
GAATGTGGTGAGTGGACATACCTCCACCAACGGGTGGTCGTAGCCCAAAGAGAAATGTAAGTGAAGGGCACACACAACAG
GGAGAGAGATGACAAGAATTGCTACTGAATGGCGTTTTGATGGAGAATCTGGAGAAACCTCGGAGAAGTTCACCGGGGAT
GGGAGGGGATGAAGACAAGAACAAGGCGAGGGGCTTAGCCTGGCGGCCTCCTCCGGTGACGGCAAGGCCTGGGAGGGTGG
CGAGAGAGCAAGCCGGGAGACAGCTGCATGGTGTCGTAAATTCGACGACCATCATCTATCTACCAGCGCAAAATATGCTG
TAACCAGCAAAGAACAACACACCCAACCAGTTCAACAGAAGGGCACTTTATATGGCCAGAGATACAAAGTAGACTTTGCA
CAAAAAATGTTCCTCGTATAAAAGTA
>chr1D_1
GGGATGTTGCGACCGTTGTCGCGAGATGCCGGAACCGAACAGCAGAGGAGCTCTAACCGGCCACGTGGGGAGACTGCAAC
CAACAGCGGCCTTGCTATGGCA-----------CGCCGGAGTCGCAACCATGCTCAATGGAGCTACAACCGATGGATTGG
GGAAGATACCGAGGGATGATCGCCGTTGCGGTGAGCACGGACCGTGAGGTGATGTCGGTGCTGCCGCTAGCTCAGGGGGT
GAGGCAGCGTTGCAGGGCTTCGACAACAATTGATGTGATGTAAGCGC---------------------------------
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-------TGGCGGGATGGGGTGCATCCGGCCAGCAAGGGTGCTACGAACGGCGCGCGTGCGAGG-CCC-CGAGATGTCTC
TCTCCAGTGCTCCGATGGGGCGGTGACGGCTCGCCGGTGCTTCTATGCTAGTGGAAGGATGCGCGGCGAGCGCGAGCGGA
GCAGTGCGGCCGCATCGCCGCGATTTGAAGCGAGGTCAGATCAGATGAAG---------------AGCGAATGGAGTTGT
GGAAGGCTGCGAGCATGTGATGGCAGGGCGAAGAGAGAATCCAACGATCCATGTTTGCTCCATCGTGCGTCCG-CACGGC
GACCGGGCGGAATTTGGGTCGGTCGACCAACC--ACG---CTAGTCACCCATAAACAAAAGGGAAACGTTTGGAGACGGT
GCGCTGGCCGAAGCTTTCAGCCGGTCGCCCGCTACCTCGCGCTCCTGTGTCGACGAGATCTCCATCCGCCCCCTATCTGC
TGCAGCCCAATCTCGCAGGCAAGGCCGCCGTCCACCCCCGCATCGCGCCCCCACCCCGCTGCAGCCCAATCTCGCCAGCA
AGGCCGCCGTCTACCCCCCGCATCGATCCTCTACCCGCGGTAGCCCAATCTCGCCGGCGAGGGCCGCCGTCCATTGCACG
GCCGACGATTTCCCCACGCGCACGACACGTCCACCCCCTACCTACAGTCTTCACGCGCGCGCATCATCGGCGGTGAAGCG
CTCCCTCGCCGGCCGCCATGCTGCCTGCAGCCATGCCCGGATCCTCCCGGGTATACAAGTGTTGCAACCGTCACTTAGAA
AAGCTTCAACAGCCGTTGAAAAAAGCTTCAACCATAGACATAGAAAGCTTCAATGGCACTGCACAACAAGGGAAAGCTGC
AACCGTTGTTGGATTTTGCTACTACCGGCAAAACTTTTTGCTACATCCATCAGGCAGAGCTACGACCCTCGCGAGGACGA
CAATGATTTTTTTGCTGCAACCGTAGCAGGCTTTTTGCTACTATCGTGGGAGGTTTTTGCTACATCCAGTAGATAAAAAA
GCTTCAACCAGACAACGAAATACAGGAAAAGTTACAACCGTTTTGACAAAAAGCTTCAACCCGCAGATGAAAAAGCTTCA
AACAGAGATTGAGAAAATCCTCCTCGACGACGACCATGGCGTCTCTCTGTGTTTTTGTTGCAACCGCAGAGTAAAAAGCT
GCAACCTTTTGTGAAGTTTTTTGCTACTATGGGTGAAGTTTTTTGCTACATACATGTAAGGCGGAGTCGCGACCTCGCGA
AAGACGGCGACGGTGTTTGATTTTTGCTGCAACCATAGTTTTTTTTTTGCTACTACGGGTGAAGTTTTTTGCTACATCCA
TGCAAACGGTGTTGATTGACTGACGGCCGCCGTCGACATAATTTCCTGCAGCGAGCATCAATGGCGAGGGGCGGCGGCCG
AGCCACAACCGTCGCCGTCAAGAGCTGCAACGCAGGTGGAGTTGTTGCATGGGAACTGGCGACGAGGACAGCCGGCGAGG
GCGGGGACTGGCGACGAGGACGGGCGGCGAGGGCGGGGACCGGCGACGAGGATGGGCGGCGAGGGCGGGGTCCGGCCGGC
GACGAGGAAGACCGACGAGGGTGGGGACTGACGACGGGGACGACCATCGGAGGGGACAGGAGGCGCGGTGCCGTACTCCC
CGAGCGGGAGATGCGAATCCAGGCGACTGCCCAAGGAAGAAGAAGTTGGGGGCGATCTATTTCTTTTTTTACCTGGATCC
AACGGCTGCGTGGCTCATATCCAATGACCTGGGCTGGAACGGCCGGTCGGTGCGCCGGCGCCTATAAGCGGCCTAAACAA
AACAAGGGAAATGTCAATCACCCAAAAAGGAAGCGTAAAGGCTAATTACGTTAACGCAGGTGAGCTTACGGTCATCGCGC
TCTGCTATCATAAGCTTTGGCACGCCCGCAGCGCTGGTGTGTGGGGTCTCACTCTCACCCATGCTTCCGAACTCGAGAGC
CCGCCACCGGCGCGACCCGAGCAAGCTCCTCTACAAGCCGCGCCCGCCGCCGGAGCCGCACCCGTTCCTGCTCCACCTCA
AGTCGCTCCCTTCCCCGGTCGCCGCGGCGGCCGCGCTCCTCTCGGCGCCGCGCCGCCTCCACGACCACCCCTTCGCCTCC
TGCGTGCTCTACCGCCTGGCCCGCGCGCGCCTCTTCCCGCTCCTCCTCCCGCTCCTCTCCGCGCTCCGCGCCCGCCGCGC
CCCGCTCCGCGCCACCGTCTTCGCGGGGCTCATCGACCGCCTCGGCGCCGCCTCCCGCCCCGACGCGGCCCTCCTCGTCT
TCTTCCGCGCCGTGCCCGCCTTCTGCCCCCACTCCAACGCCACCTTCCACGCGCTGGTCCACTGCCTCGTCTGCAACGGC
CGCGTGGACGCCGCCCGGAACATGCTCCCCCGGGCCGCCAAGCTCGGCGTCCGCCCCAACGCCGTCTCCTACAACATCAT
CCTCAAGGGGCTGTGCGGCCGGGACGGGTCCGCGGGCGCCCGCGTGGTGCTCGACGAAATGCTCGGCCGCGGCGTCCGGC
CCACGGTGGTCACCTTCAACACGCTGGTGGGGGCGGCGTGCCAGGAAGGGGACGTGGGCGCGGCGGAGCGGCTCAAGGAA
GAGATGGTGCGCCGGGGCGTCTCGCCGAACGCCGTGACATACTCCCTCCTGATGCGGGGCCTGTGCGACGCCGGTCGGCA
GGACGACGCCAAGAAACTGATGTTCGACATGGAGTACCAGGGCTGCCAGACCGAGGCGGTGAACTACGGCGTGCTGATGA
GCGCCTACGCGAGGCAGGGCGACGTCGACGCCATCAGGGAGCTGCTCTCCGACATGCGCAAGCGCAAGCTCGGGCCCGAC
GACGCGGGCTACAACGTCCTGATCAAGTGCCTGTGTGACAGCGGCAGGGCGGACGAGGCGCACAAGGCGCTCGTCGAGAT
GCAGCTCAAAGACGGCACGGCACCAAGCGCGGCGACGTACCGCGTCCTGGCCGACGGGTGCTGCAGAGCCGGCGATTTCG
GGTTGGGGCTACGGGTTTTCAACGCCATGCTGTCCAGCGGGCATCGCCCCCTAGGTCACACCTTCAAGCACCTGGCGAAA
GGGCTCGGCGAGGATGGCAAGGCGGAGGAAGCCTGCTTCGTCTTGGAGAAAATGGCGGAGAGTGGGGTGTGGATGGATGC
AGAAGGGTGGCGGTCTCTTGCTACATGCGTCTGCAGCGGCAGTGCAGGTGAGGTGAAGCTCGTCGATGAGCTAGCGTTGT
CATCTTGACATTTCCAGTCCATGCGAGGCTTTGACAGCCTTCAGCTGTGGCATTTCCATTTGTCTA--------------
--------TTCTCTTTATCTTGCTTCAGTTCCAGAAGCATTTAGTTGTGCAACGCAAAATGTATAATGCTCCTGGGTATA
GTGACAGATAAAAGATGCGAGTCTTACTGCTGAAAGTGATAGCTCACTCAGCTTCTGCACTGAAGTTCGTCAGTTTATTT
CAAGTTAGAAATCTGTGTGCAGTTTATCAATCTTTCCACACCACTTTCAGAACTGTCGTT-----TTTAAAAATAGTCAC
CGGGTGAGGAACCGCCACCTGTGTATATCGATCTCATTTCAGAAAGAATGATCCGGTTTATGTAACAAACCGAATCGAAA
ACCAATTTTTTTCCCACCCGGGCTCGCACCCTTTTCCATTAATTTTGCAATCAACAGAAATACATCAGTCTGTTTTGAAT
CGAAAACCATTGATTCAGTTTACGATGAGAAACCAAAACCGAATCAAAAATCTTAACAATGC-GAGGGGCAAGCCTGGCT
GGCCGAGCATGCTCCAGGGAGAAGCGTCGCTTTAACGCCAGCGAGAACAAGTGATGGTGATGAAGTGATATGATCGTAGA
GAATGCAGTGAGTGGACATACCTCCACCAACGAGTGGTCATAGCCCAAAGAGAAGTGTAAATGAAGGGCACACACAACAG
GGAGAGAGATGACAAGAATTGCTACTGAATGGCGTTTTGACGGAGAATTTGGAGAAACCTCAGAGAAGTTCACCGGGGAT
GGGAGGGGATGAAGACAAGGACAAGGCCA--------------------------GTGACGGCGAGGCCTGGGAGGGTGG
CGAGAGAGCAAGCCGGGAGGCAGCTGCATGGTGTCCTAAATTCGACGACCATCATCTGTCTACTAGCGCAAAATATGCTG
TAACCAGCAAAGAAAAACACACGCAACCAATTCAACAGAAGGGCACTTCATATGGCCAGAGATACAAAATAGACTTTGCA
CAAAAAATGTTCCTCGTATAATAGTA
>chr1B_1
GGGATGTTGCGACCGTTGTCCCGAGATGCCGGAACCGAACATCAGAGGAGCTCTAACCGGCCACGCGGGGAGACTGCAAC
CAACAGCGGCCTTGCTAGTGCATCTTTTTTCGACGCGGGAGTCGCAACCGTGCTCAATGGAGCTGCAACCGATGAATTGG
GGAAGATACCGAGGGATGATCGCCATTGCGGTGAGCACGGACCGCGAGGTGATGCCGGTGCTGCCGCTGGCCCAAGGGGT
GAGGCAGTGTTGCAGGGCTTCGACAACGAT--------------------------------------------------
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-----------------------------------------------------------------------------ATG
TAAGCGGTGGCGGGAGGGGGTGCATCCGCCCCGCAAGGGTGCTACGACCGACGCGTGTGCGAAG-CCCTCGAGATGTCTC
CG-CCAGTGCTTCGATGGGGCGGTGGTGGTTCATCGGTGCTTCTATGCTAGTGGAAGGATGCGCGGCG----------GA
GCAGTGCGGCCACATCGCAACGATTTGGGGCAAGGTCGGAT---------------------------GAATGAAGTTAT
GGAAAACTGCGAGCACGTGGTGGAAGGTCGAAAAAAGAATCCAACGATCTATATTTGTTCCATCGTGCGTCCGGCACGAC
GACCGGACGAAATTTGGGCCGATCGACCGACC--ATGAGTCTAGTCACCCGTAACCAAAA--------------------
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--CAAGGGAAATGTCAATCACTCAACAAAGAAGCGTAAAGGCCAATTGCGTTAGCGCAGGCGAGCTTACGGGCATCGCAC
T----------------------------------------------------CTCGCCGATGCTTCCGAACTCGAGAGC
CCGCCACCGGCGCGACCCGAGCAAGCTCCTCTACAAGCCGCGCCCGCCGCCGGAGCCGCACCCGTTCCTGCTCCACCTCA
AGTCGCTCCCTTCGCCGGTCGCCGCGGCGGCCGCGCTCCTCTCGGCGCCGCGCCGCCTCCACGACCACCCCTTCGCCTCC
TGCGTGCTCTACCGCCTGGCCCGCGCGCGCCTCTTCCCGCTCCTCCTCCCGCTCCTCTCCGCGCTCCGCGCCCGCCGCGC
CCCGCTCCGCGCCACCGTCTTCGCCGGGCTCATCGACCGCCTCGGCGCCGCCTCCCGCCCCGACGCGGCCCTCATCGTCT
TCTTCCGCGCCGTTCCCGCCTTCTGCTCCCACTCCAACGCCACCTTCCACGCGCTGATCCACTGCCTCGTCTGCAACGGA
CGCGTGGATGCCGCCCGGAACATGCTCCCCCGGGCCGCCAAGCTCGGCGTCCGCCCCAACGCCGTCTCCTACAACATCAT
CCTCAAGGGGCTGTGCGGCCGGGACGGGTCCGCGGGCGCCCGCGTGGTGCTCGACGAAATGCTCGGCCGCGGCGTCCGGC
CCACGGTGGTCACCTTCAACACGCTGGTGGGGGCGGCGTGCCAGGAGGGGGACGTGGGCGCGGCGGAGCGGCTCAAGGAA
GAGATGGTGCGCCGGGGCGTCTCGCCGAACGCCGTGACATACTCCCTCCTGATGCGGGGTCTCTGCGACGCCGGTCGGCA
GGACGACGCCAAGAAGCTGATGTTCGACATGGAGTACCAGGGCTGCCAGACCGAGGCGGTGAACTACGGCGTGCTGATGA
GCGCCTACGCGAGGCAGGGCGACGTTGACGCCATCAGGGGGCTGCTCTCCGACATGCGCATGCGCAAGCTCGGGCCCGAC
GACGCGAGCTACAACGTCCTGATCAAGTGCCTGTGTGACAGCGGCAGGGTGGAGGAGGCGCACAAGGCGCTCGTCGAGAT
GCAGCTCAAAGATGGCATGGCGCCAAGCGCGGCGACTTACCGCGTCCTGGCCGACGGGTGCTGCAGAGCCGGCGATTTCG
GGTTGGGGCTACGGGTTTTCAACGCCATGCTGTCCAGCGGGCATCGCCCCCTAGGTCACACCTTCAAGCACCTGGCGAAA
GGGCTGGGCGAGGACGGCAAGGCGGAGGAAGCCTGCTTCGTCTTGGAGAAGATGGCGGAGAGTGGGGTGTGCATGGATGC
AGAAGGGTGGCGGTCTCTTGCAACATGCGTCTGCAGCGGCAGCGCAGGTGAGGTGAAGCTCGTCGATGAGCTAGCGTTGT
CATCTTGACATTTCCAGTCCATGTGAGGTTTTGACAGGCCTCAGCCGTTGCGTTTGTCACCTTAGGGGGGTCGGCGTTTC
CATTGTTTTTCTCTTTGTCTTGCTTCAGTTACAGGAGCACTTGGTTGTGCAAGGCAAAATGCATAAAGCTCCTGGATATA
ATGGCAGATAAAAGATGCGAGTATTACTGCTGGAAGTGATAGCTCACTCAGCTTCTGTACTGAAGTTCGTCGGTTTATTT
CGAGTTAGAAATCTGTGTGCAGTTTATCAATCTTTTCATACCACTTTGAGAACTGCCGTTCCCTTTTTTTAAATAGTCAC
CGGGGGAGGAGTTGCCACCTG--TATATCGATCGCATTTCAGAAAGAATGATCCGGTTTATGTGAGAAACCGAATT----
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-GAAAACCATTGATTCAGTTTACG-TGAGAAACCGAAACCGAAACAAAAACCTTAACAATGC-GAGGGGCAAGCCTGGCT
GGCCGAGCATGCACCAGGGAGAAGCGTCGCTTTAACGCCAGCGAGAACAAGTGATGGTGATGAAGTGATATGATCGTAGA
GAATGTGGTGAGTGGACATACCTCCACCGACGGGTGGTCATAGCCCAAAGAGAAGTGTAAATGAAGGGCACACACAACAG
GGAGAGAGATGACAAGAAATGCTACTGAATGGCGTTTTGATGGAGAATCTGGAGAAACCTCAGAGAAGTTCACCGGGGAT
GGGAGGGGC---------------------------------GCGGCCTCCTCCGGTGACGGCGAGGCCTGGGAGGGTGG
CGAGAGAGCAAGCCGGGAGGCAGCTGCATGCCGTCGTAAATTCGACGACCATCTTCTGTCTACTAGCGCAAAATATGCTG
TAACCAGCAAAGAACAACACACGCAAACAGTTCGACAGAAGGGCACTTTATATGGCCAGAGATACAAAATAGACTTTGCA
CAAAAAATGTTCCTCGTATAA-----
>SNPs
---------------------------------S----S-SS----------S---S-------S---------------
-------S---------------------SSS-SSSS-SSS------S-------S------------------------
------S-SS------S-----S----------------S-----S----------------------------------
----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
------------------------------------------S---S---------S--S----S--S------------
--S---S---S----------------S---------------S------------------------------------
------S-----S----SS----------------S-----S--S--S--SSSSSSSSSSSSSSS-----------S---
--------S-------------S-------------S------------------SSS--SSS-----------------
--------S------S---------------SSS----------------------------------------------
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--------S----S------------SS-S--------------------------------------------------
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------------------------------------------S-------------------------------------
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-----------------S--------------------------------------------------------------
---------------------------------------------------------------------S----------
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----------------------S-----S--------------------------------S------------------
-------------------------------------------------------------------------------S
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-------------------S----------------S-------------------------------------------
--------------------------------------------------------S-----------------------
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----------------------------------------------S---------------------------------
------------------------------------------------------------------S-S-----------
----------------------------------------S---------------------------------------
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--------------------------------------------------------------------S-S---------
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--------------------------------------------------------------------------S-----
----------------------------------------S---------------------------------------
---SS-----------S--------------S------S---------------SS------------------------
-S--------------------------------------S---------------------S-----------------
-------------------------------------------------------------S------------------
---------------------------------------S--------------S-----S-------------------
-------------------------------------------------------------S------------------
-------------------S-------S-SSSSSSSSSSSSS---------------------S----------------
-------------------S-------------------------------------S-----S----------------
----------------------S---------------------------------------------S-----------
---------------------S----
>forward_520
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--------------------CTGGGGCGTTTCTGTTTTGG----------------------------------------
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>reverse_3360
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-------------------------------------------------------------------------------T
GGACGACGCCAAGAAACTG-------------------------------------------------------------
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>forward_858
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--------------------------------------GATGAGGTGGAGAGCAGAGC----------------------
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>reverse_3829
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--------------------------------------------------------------------TTGGATGGATGC
AGAAGGGT------------------------------------------------------------------------
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>forward_861
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-----------------------------------------GAGGTGGAGAGCAGAGCAAG-------------------
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>reverse_3881
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----------------------------------------GGTGCAGGTGAGGTGAAGC---------------------
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>forward_3229
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---------TCACCTTCAACACCCTGGTC---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_4820
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------ACAGCTGCATGGTGTCGTAA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------
