>input_sequence_54182
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---------------------------------------------------------ATGGCTGAAGAGGATGTCCAGCC
GATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTCCCCTCTCATGGTGTCAATCCCAAATTCAGTTA---GCA
TGTTGTAGTGCAGAGTACATTTTAGCGTTCGCGCTAACTGAACAACCGTCC-----TTCGTGTCAAACTGCAGGCGGGGT
TCGCCGGCGACGACGCGCCGAGGGCCGTGTTCCCGAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCATG
GGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCGATCGAGCACGG
CGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAGC
ACCCCGTGCTGCTCACGGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AGCTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACCACC--------------
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---------------------GGCATCGTCATGGACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTT
CACGCTCCCCCACGCCATCATCCGGCTCGACCTCGCCGGCCGCGACCTCACCGACGGCCTCATGAAGATCATGACCGAGA
GGGGCTACTCCTTCACCACCACCGCCGAGCGGGAAATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGAC
TACGAGCAGGAGCTGGAGACGGCCAGGACCAGCTCCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCAC
CATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTGCTCTTCCAGCCCTCCATGATCGGCATGGAGGCCGCCGGCATCCACG
AGGCCACGTACAACTCCATCATGAAGTGCGACGTGGATATAAGGAAGGATCTGTACGGCAATGTCGTGCTCAGCGGGGGT
TCCACCATGTTCCCTGGGATCGCCGACCGCATGAACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGAAGGT
CGTCGCCCCGCCGGAGAGGAAGTACAGTGTCTGGATCGGCGGCTCCATTCTCGCCTCTCTCAGTACCTTCCAGCAGGTAC
CCATTTTCCCCCTACATGCT-----ACTAATGCTTGCTCTGTTACTGCTCGTTTCACCCTGCGA---GATTAATGGCGTG
CCTCCATTTGTGTCGCAGATGTGGATCTCCAAGGCAGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTT
CTGA----------------------------------------------------------------------------
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--
>chr3A_1_TraesCS3A01G377300
ACCATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCGGGTCGTCGTTCC
GCTTGAATGCCTGC----------GCCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCCCGGCCAAGAACGCAGCGG
ACACCCGAGCTACCGA---------GAGCCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCAGGGCATATAAAACTGCTCCC
CATCCACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCCGCTCGCGTCACTCCGAGCCC
CC------------CCAATCCGTCAACGAGCCCGCCCGAGCAAAGGTATGATTTCCTCCCCCTCCTCCCTGAACCGATTT
GGTCCGTAGTTCCGATGGATCGTTCTCA---------TAGATCGCCGCGCGAGGTGTCGGCTCGTAGTTTTTCCGGTGGT
TTTCTCGCTGGCATGGGGGTTT---GGTGGTTGATAGTTGGTACGACGCGATCCATGG--TGGT--------CGTCCATG
GTGTTTGATCATCGGATTG---------------------GTAGGATCTTTAGCTGGTAGCTTGCGCGACAGCCGTTGCT
GGTCAAGTCGATGATACACGAGTTCCCTTCCCTGGTGACCGCTGACCACGGGCTGCAGTATCTTTTCTGTTGACCGCTTC
GTGTTCGGGATGACCAGTGAATCGTGAACTAGTACTATCTTTCCTAATTAAACACGTGATTTGCGAAAGATTGGATCAAT
TTCTTGATATATGTATGTTGTACGTTTACCGTGATT--------GTAGCTGATTAAGAGTCAAATCCCCCGCTAATCATA
CCATGTAATACCTCGAGAAATCCTGCGTGATGGCCGGCAAACTATCCGTTTGTTATCACGCGTTTGTCTTGGAT--CCAT
CTGTATATATGTGAGCAAAAAATATTGTTGTGATGCTCAATACCATGCCC--------TGATCTTTTATTATCGAAA---
--TTGAAGAAACAGACTGAAAAATAGAATTCTTCTGTCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCC
GATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTCCCCTCTCATGGTGTCAATCCCAAATTCAGTTA---GCA
TGTTGTAGTGCAGAGTACATTTTAGCGTTCGCGCTAACTGAACAACCGTCC-----TTCGTGTCAAACTGCAGGCGGGGT
TCGCCGGCGACGACGCGCCGAGGGCCGTGTTCCCGAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCATG
GGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCGATCGAGCACGG
CGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAGC
ACCCCGTGCTGCTCACGGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AGCTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACCACC--------------
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---------------------GGCATCGTCATGGACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTT
CACGCTCCCCCACGCCATCATCCGGCTCGACCTCGCCGGCCGCGACCTCACCGACGGCCTCATGAAGATCATGACCGAGA
GGGGCTACTCCTTCACCACCACCGCCGAGCGGGAAATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGAC
TACGAGCAGGAGCTGGAGACGGCCAGGACCAGCTCCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCAC
CATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTGCTCTTCCAGCCCTCCATGATCGGCATGGAGGCCGCCGGCATCCACG
AGGCCACGTACAACTCCATCATGAAGTGCGACGTGGATATAAGGAAGGATCTGTACGGCAATGTCGTGCTCAGCGGGGGT
TCCACCATGTTCCCTGGGATCGCCGACCGCATGAACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGAAGGT
CGTCGCCCCGCCGGAGAGGAAGTACAGTGTCTGGATCGGCGGCTCCATTCTCGCCTCTCTCAGTACCTTCCAGCAGGTAC
CCATTTTCCCCCTACATGCT-----ACTAATGCTTGCTCTGTTACTGCTCGTTTCACCCTGCGA---GATTAATGGCGTG
CCTCCATTTGTGTCGCAGATGTGGATCTCCAAGGCAGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTT
CTGATCAGTCCGAGGCTGACCAACCTGTACCTGTCATTCAGTTGCTTGAGGTCCAAATCGCAGATGCTTGAATGTGCCAT
GGTTTCCATGGCGTCGTGGTTCGCTGAAAGTGTTTTGGTCATGGAACAAATTTGAAAGGTAAGGTCGATTGATGGTTTCG
AACAATTCTGTAGGACGTCGGGTCAGTTTCAGTGGGTTCACTGAAGCATGTAGTCTGGGACATTTATTTTGGTTTCGGCG
ATTCAGCTCATGCGTGTGCTGGAGACCTGAAACAGAGTGTCGTTTGTTTGCACCACCCCGGCGAGGGTGTTGATTCTTGT
ACCTTTTGTAGCGGGGGTTTCTTGTCAAACCACCTGGTCAGTTCTCGCATGTAGA----AGCTTATTTTGTTGGTACTTC
AGCATTTGTACATTTTGAATTATTATTGAAGGAAGTTTATGTTTGTTATGTGTTGTTGTGG-------------------
----------TACTCGTTGTTGATCCGGTTGGTGTGTTATGACTCTAGCAAGCGTCACAATCCCGTGCGATGGAAGTTTG
CAACAGGTTCATGTATACTCTCGAAAGCTAAACAACAATGTATTTGTGTGCGTATGGCCTTGGATACATATCGTCAACCT
CA-AATCGTGTCGGTGGCTGATCTGTCCATACCACATCCTTGGTGATTGTCG--ATTCGAGTCGGGCGATCAGAGATGAA
ATTGCTCAAAACCCACCATTCAAATGGAAGTTTGAGACTC-AAGAAAATCTTCTTCCGTGTCCGTTTTCAACTGGAAATC
CAATGCTCAAAGAAAACCTTCACCCGAGTCTGTTTTCCTAATAATCACCTCAAATAAGCCTACAACACGCCTTTTAGTGG
TATCACTTTGCTCAA-CGAGAGATGACTTACAAGTGATCTATGGTGTGCCTTTTATAGGCTCTTGGTAGTGTAGAAATGA
CCACCAATACTCTCGTGGGAGAGAAAAGTAAGGTCAATACCCTCAAAAAGGAGAAAGGAAAACATGTCTGATGTACTTGG
TC
>chr3D_1
ACCATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCCGGTCGCCGTTCC
GCTTCAATGC---------------CCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCGCGGCCAAGAACGCAGCGG
ACACGCGAGCTACCCTACCGAGAGCGAGGCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCACAGCATATAAAACTGCTCCC
CATCCACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCTGCTCGCGTCACTCCGAGCTC
CC------------CGGTT-CGTCAACGAGCCCGCCCGAGGTATGCTTTCC--TCTTCCTCCTGCTTTCTGAATCGATTT
GGCCCGTCGCTCCGATGGATCGTTCTGA---------TAGATCGCCGCGCGAGGTGTCGGCTCGTAGTTTTTCCGGTGGT
TTTCGCGCTGGCATGGGGGTTGTTGGGTGGTTGGTAGTTGGTACGACGCGATCCTTGGCATGGT--------CTTCCATG
GTGCTTGATCATCCGATTG---------------------GTAGGATCTTTAGCTGCTAGCTTGCGCAACATCCGTTGCT
GGTCAGGTCGATGATACACGAGTTCCCT-----GGTGACCGCTGGCCACGGGCTGCAGTATCTTCTCTGTTGACCGCTTC
GGGCTCGGGGTGACCAGTGAATCGTGAACTGGTAGAATCTTTCCAAATTAAACACGTGATTTGCGAAAGACTGGATCAAT
CTCTTGATATATGTGTGTGGTACTTTTACCGTGATT--------GTAGCTGATTAAGAGTCAAATCCCCCGCTAATCATA
CCATGTAATACCTCGAGAAATCCTGCGTGATGACCGGCAAATTATCCGTTTGTTATCACGCGTTTGTCTTGTAT--CCAT
CTGTATATATGTGAGCAAA---TATTCTTGTGATGCTCAACCATGCCCCAAGCGCCGTTGATCTTTTATTACCGATCGAA
ATTTGAAGAAACAGACTGAAAAATAAGATTCTTCTATCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCC
CATTGTGTGCGACAATGGCACCGGAATGGTCAAGGTCAGTTACCCTGTCATGGTGTCAATCCCAAATTCAGTTA---GCA
TGTTGTTTGCCTGTTGTTACATTTCA----GCGCGAACTGATCATCCATCCATCCATTCGTGCCAAACTGCAGGCGGGGT
TCGCCGGCGACGACGCGCCGAGGGCCGTGTTCCCCAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGGATG
GGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCGATCGAGCACGG
CGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAGC
ACCCGGTGCTGCTCACGGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACTCAGATCATGTTCGAGACCTTC
AACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACCACC--------------
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---------------------GGCATCGTCATGGACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTT
CACGCTCCCGCACGCCATCATCCGGCTCGACCTCGCCGGCCGCGACCTCACCGACGGCCTCATGAAGATCATGACGGAGA
GGGGCTACTCCTTCACCACCACCGCCGAGCGGGAAATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGAC
TACGAGCAGGAGCTGGAGACGGCCAGGACCAGCTCCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCAC
CATCGGGGCGGAGCGGTTCAGGTGCCCCGAGGTGCTCTTCCAGCCGTCCATGATCGGCATGGAGGCCGCCGGCATCCACG
AGGCCACGTACAACTCCATCATGAAGTGCGATGTCGATATCAGGAAGGATCTGTACGGCAATGTTGTGCTCAGTGGGGGT
TCCACCATGTTCCCTGGGATCGCCGACCGCATGAACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGAAGGT
CGTCGCCCCGCCGGAGAGGAAGTACAGTGTCTGGATCGGCGGCTCCATTCTTGCCTCTCTCAGTACCTTCCAGCAGGTAC
C-ATTTTTTCCCTACATACT-----ACTGA----TGCTCTGTTACTGCTCGTTTCACCCTGCGAAGAGACTAATGGCGTG
CCCGTGTTTGTGTCGCAGATGTGGATCTCCAAGGCGGAGTACGATGAAGCTGGCCCGTCGATCGTCCACATGAAGTGCTT
CTGATCAGTCCGTGGCTTGCCAACCTGTACCTGTCATTCAGTTGCTTGAGGTCCAAATCGCATATGCTTGAATGTGTCAT
GGTTTCCACGGCGTTGTGGTTCACTGAAAGTGTTTTGGTCATGGAACAAATTTGAAAGGTAAGGTCGATTGATGGTTTCG
AACAATTCTGTAGGACGTCAGGTCAGTTTCAGTGGGTTCACTGAAGCATGTAGTCTGGGACATTTATTTTGGTTTCGGCA
ATTCAGCTCATGCGTGTGCTGGAGACCTGAAACAGAGTGTCGTTTGTTTGCACCACCCCGGCGTGGGTGTTGATTCTTGT
ACCTTTTGTAGCGGTGGTTTCTTGTCGAACTACCTGGTCTTTTCTCGTATGTAGAAGGAAGCTTATTTTGTTGGTACTTC
AGCATTTGTACATTTTGAA---TTATTGAGGGAAGTTTGCGTTTGTTATCAGTTGT------------------------
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--
>chr3B_1
ACCATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCCGGTCGTCGTTCC
CCTTCAATGCTGGTGCCGTGCCGTGCCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCGCGGCCAAGAACGCAGCGG
ACACCCGAGCTACCGA---------GAGCCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCAGAGCATATAAAACTGCTCCC
CTCT-ACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCCGCTCGCGTCACTCCGAGCTC
CCACGAACCACCCCCCAATCCGTCAACGCGCCCGCCCGAGGTATGCTTTCC--TCTTCCTCCTCCTTTCTGAATCGATTT
GATCCGTAGAGCAACGGGTTCTGCTAGGTTGTTTCGGTAGATCGCCAAGCGAGGTGTCGGCTCGTGGTTTTTCCGGTGGA
TTCTGCGCTGGCAGGGTGGTTC--GGGTGGTTGGTAC--GGTGCGGTGCGATCCTTAGCGAGTTCGTGCTACCGTCGATG
GTGTTCGATCATCGGATTTTGGTATGGTGCCGTTGATTCCGTAGGATCTTAT----------------------------
--------------------------CT-----CGTGACCGCTGACCACGGGCTGCGGTATCTTCTCTGTTGACCGCTTC
GGGTTCGGGGTGACTAGTGAATCGTGAACTGGTAGAATCTTCCTAAT---AACACGTGATTTGCGAAAGATTGGATCAAT
CTCGTGAGATA--TGTATGGTACTTTTACCGTGATATATACGTAGTAGCTAATCAAGAATCAAATCCCGCGCTAATCATT
CCATACAATACCTGCAGAAATCTTGCGTGATGACCGGCAAAATATCCGTTTGTTATCACGCGTTTGTCTTGTATATCCAT
CTGTACATATGTGAGCGAA---TATTGTTGTGATGCTCAAGACCATGCCC--------TGATCTTTTATTA----TCGAA
ATTTGAAGAAGCAGACTGAAAACTAAAATTCTTCTGTCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCC
CATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTACCCTGTCATGGTGTCAATCCCAAATTCAGTTACTAGCA
TGTTGTAGTGCAGAGTACATTTCAGCG----CACGAACTGATCATCCATCCATCCTTCCGTTGCAAACCACAGGCGGGGT
TCGCCGGCGACGATGCGCCGAGGGCCGTGTTCCCCAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCATG
GGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCCATCGAGCACGG
CGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCCGAGGAGC
ACCCGGTGCTGCTCACCGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACAACC--------------
--------------------------------------------------------------------------------
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---------------------GGCATCGTCATGGACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTT
CACGCTCCCCCACGCCATCATCCGGCTGGACCTCGCCGGGCGCGACCTCACCGACGGCCTCATGAAGATCATGACGGAGA
GGGGCTACTCCTTCACCACCACCGCCGAGCGGGAAATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGAC
TACGAGCAGGAGCTGGAGACCGCCAGGACCAGCTCCTCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCAC
CATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTGCTCTTCCAGCCGTCCATGATCGGCATGGAGGCCGCCGGCATCCACG
AGGCCACGTACAACTCCATCATGAAGTGCGATGTCGATATCAGGAAGGATCTGTACGGCAATGTCGTGCTCAGTGGGGGT
TCCACCATGTTCCCTGGGATCGCCGACCGTATGAACAAGGAGATCACCGCACTCGCGCCCAGCAGCATGAGGGTGAAGGT
GGTCGCCCCGCCGGAGAGGAAGTACAGTGTGTGGATCGGCGGCTCCATTCTTGCCTCTCTCAGTACCTTCCAGCAGGTAG
CCATTTTTTTCTTACATACTTGCTCACTAA----TGCTCTGTTATTGCTCGTTTCACTCTCCGA---GATTAATGGCGTG
CCTTCATTTGTGTTACAGATGTGGATCTCCAAGGCGGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTT
CTGATCAGTCCGTGGCTGACCAACCTGTACCTGTCATTCAGTTGCTTGAGGTCCAAACCGCAGATGCCTGAATGTGTCAT
GGTTTCCACGGCGTCGTGGTTCACTGAA----------TCATGGAACAAGTTTGAAAGGTAAGGTCGATTGATGGTTTCG
AACAATTCCGTAGGGCGTCGGGTCAGTTTCAGTGGGTTCACTGAAGGTGGGT---TGGGACATTTATTTTGGTTTCGGCG
ATTCAGCACATGCGTGTGCTGGAGACCTGAAACAGAGTGTCGTTTGTTTGCACCACCCCGGCGAGGGTGTTGATTCTTGT
ACCTTTTGTAGCGGGGGTTTCTTGTCGAACTACCTGGTCTGTTCTTGTTTGTAGAAGGAAGCTTA-----TTGGTACTTA
AGCATTTGTACATTTTAAA---TTATTGAAGGAAGTTTATGTTTGTTATGTGTTGTTGTGGTAAAAAAAGATCATAAAAC
GTGGAGTGGATACTCGTTGTTGATCCGGTTGGTGTGTTACGATTCTAGCAAGCGTCACAATCCCGTGTGAGGGAAGTTTG
CAACGGGTCGATGTATACTCTCGAAAGCTAGACAACAATGTGTTTGTGTGGGTATGGCCTTGGATACATATTGTCAAACC
CTGAATCGTGTCGGCGGCTGATCCGTCGATACGACATCCTTGGTGATCCTTCCCATTCGAGTCGGGC-ATCAGAGATGAA
ATTG--------------TTCAGATGGAAGTTTGAGACTCGAAGAAAATCTTCTTCCCTGTCCATTTTCAACTGGAAGTC
CAATGCTCAAAGAAAACCTTCACCCTAGTCTGTTTTTCTAATAATCACCTCAAAAAAGCCTAGTCCACGCCTTTTAGTGG
TATCATTTTGCTCAAACGAGAGATGACTTAGAAGTGATCCATGGTGTGCCTTTTATAGGCTCTTGGTCATGTACAAATGA
CCACCAATACTCTTGTGGGAGAGAAAAGTAAGGTCAAGACCCTCAAAAAGGAGAAAGAAAGCCATGTCTAATGTACTTGG
TC
>chr4A_1164
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--------------------------------------------------------------------TGCAGGCTGGGT
TCGCTGGAGATGATGCTCCCAGGGCCGTCTTCCCCAGCATCGTGGGCCGCCCACGCCACACCGGTGTCATGGTCGGGATG
GGGCAGAAGGACGCCTACGTTGGTGACGAGGCGCAGTCCAAGAGGGGTATCTTGACTCTCAAGTACCCCATCGAGCACGG
TATCGTCAGCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCCCCAGAGGAGC
ACCCTGTCCTTCTCACTGAGGCGCCGCTCAACCCCAAGGCCAATCGTGAGAAGATGACACAGATCATGTTCGAGACCTTC
AACACTCCTGCTATGTACGTCGCCATCCAGGCCGTCCTCTCGCTGTACGCCAGTGGTCGTACCACAGGTGAGCTCATCTA
TATCCAACTCTGGTCTTTTGAATCAGGAACCCTGGAATTTAGCATGCTCACATG----TAGATGAGGTTAATCTGTAAAA
TTTCTCAAATCGTTTTGTGGTAGCACTAGTTTTGTTCTGTGACATCTGGTTAATATTTGTCAACCAAACCTGATAGGCAG
TTAATTGTCATCACCTCGTACACTGTCAATGTAACAAGTATTTTTTTCATTTATCAATAACTCAAATGTGCCCTCTTGAA
CTTGTC--------------AGGTATCGTGCTGGACTCTGGAGATGGTGTCAGCCACACTGTCCCCATCTACGAAGGATA
TGCTCTCCCCCATGCTATCCTTCGTCTCGACTTGGCTGGGCGTGATCTCACCGATCACCTCATGAAGATCCTGACTGAGC
GTGGTTACTCATTCACCACCACCGCTGAGCGGGAAATTGTGAGGGACGTGAAGGAGAAGCTGTCCTACATTGCCCTGGAC
TATGACCAGGAAATGGAGACTTCCAAGACCAGCTCTTCTGTGGAGAAGAGCTATGAGCTGCCTGATGGGCAGGTTATCAC
CATTGGTTCTGAGCGTTTCCGTTGTCCTGAGGTTCTCTTCCAGCCATCCTTCATTGGGATGGAAGCTGCAGGTATTCATG
AGACTACCTACAACTCCATCATGAAGTGCGACGTGGATATTAGGAAGGATCTGTACGGCAACATTGTTCTTAGTGGTGGT
ACCACTATGTTCACTGGAATCGCTGATAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAAGATCAAGGT
TGTTGCTCCTCCTGAAAGGAAGTACAGTGTCTGGATCGGAGGATCCATCTTGGCATCTCTCAGCACCTTCCAGCAGGTA-
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--
>chr4B_1164
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--------------------------------------------------------------------TGCAGGCTGGGT
TCGCTGGAGATGATGCTCCCAGGGCCGTCTTCCCCAGTATCGTGGGTCGCCCACGCCACACCGGTGTCATGGTCGGGATG
GGGCAGAAGGACGCCTACGTTGGTGACGAGGCGCAGTCCAAGAGGGGTATCTTGACTCTCAAGTACCCCATCGAGCACGG
TATCGTCAGCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCCCCAGAGGAGC
ACCCCGTCCTTCTCACTGAGGCGCCGCTCAACCCCAAGGCCAATCGTGAGAAGATGACACAGATCATGTTTGAGACCTTC
AACACTCCTGCTATGTACGTCGCCATCCAGGCCGTCCTCTCGCTGTACGCCAGTGGTCGTACCACAGGTGAGCTCATCTA
TATTCAACTCTGGTCTTTTGAATCAGGAATCCTGGAATTTAGCATCTTCACATGTAGTTAGATGAGGTTAATCTGTCAAA
TTC---------TTTTGTGGTAGCACTAGTTTTGTTCTATGACATCTGGTAAATATTTGTCAACCAAACCTGATAGGCAG
TTAATTGTCATCCTGTCATACACTGTCAATGTAACAC--A-TTTTTTCATTTATCAAAAACTCAAATGTGCCCTCTTGAA
CTTGTC--------------AGGTATCGTGCTGGACTCTGGAGATGGTGTCAGCCACACTGTCCCCATCTACGAAGGATA
TGCTCTCCCCCATGCTATCCTTCGTCTCGACTTGGCTGGGCGTGATCTCACCGATTACCTCATGAAGATCCTGACTGAGC
GTGGTTACTCATTCACCACCACTGCTGAGCGGGAAATTGTGAGGGACGTGAAGGAGAAGCTGTCCTACATTGCCCTGGAC
TACGACCAGGAAATGGAGACTTCCAAGACCAGCTCTTCTGTGGAGAAGAGCTATGAGCTGCCTGATGGGCAGGTTATCAC
CATTGGTTCTGAGCGTTTCCGTTGCCCTGAGGTCCTCTTCCAGCCATCCTTCATTGGGATGGAAGCTGCAGGTATCCATG
AGACCACCTACAACTCCATCATGAAGTGCGACGTGGATATTAGGAAGGATCTGTACGGCAACATTGTTCTCAGTGGTGGT
ACCACTATGTTCACTGGAATCGCTGATAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAAGATTAAAGT
TGTTGCTCCTCCTGAAAGGAAGTACAGTGTCTGGATCGGAGGATCCATCTTGGCATCTCTCAGCACCTTCCAGCAGGTA-
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--
>chr4D_1164
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--------------------------------------------------------------------TGCAGGCTGGGT
TCGCTGGAGATGATGCTCCCAGGGCCGTCTTCCCCAGTATCGTGGGTCGCCCACGCCACACCGGTGTCATGGTCGGGATG
GGGCAGAAGGACGCCTACGTTGGTGACGAGGCGCAGTCCAAGAGGGGTATCTTGACTCTCAAGTACCCCATTGAGCACGG
TATCGTCAGCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTCGCCCCAGAGGAGC
ACCCTGTCCTTCTCACTGAGGCGCCGCTCAACCCCAAGGCCAATCGTGAGAAGATGACACAGATCATGTTCGAGACCTTC
AACACTCCTGCTATGTACGTCGCCATCCAGGCCGTCCTCTCGCTGTACGCCAGTGGTCGTACCACAGGTGAGCTCATCTA
TATTCAACTCTGGTCTTTTGAATCAGGAATCCTGGAATTTAGCATGCTCACATG----TAGATGAGGTTAATCTGTAAAA
TTTCTCAAATCGTTTTGTGGTAGCGCTAGTTTTGTTCTGTGACATCTGGTAAATATTTGTCAACCAAACCTGATAGGCAG
TTAATTGTCATCCCCTCATACACTGTCAATGTAACAAGTA-TTTTTTCATTTATCAATAACTCAA-TGTGCCCTCTTGAA
CTTGTC--------------AGGTATCGTGCTGGACTCTGGAGATGGTGTCAGCCACACTGTCCCCATCTACGAAGGATA
TGCTCTCCCCCATGCTATCCTTCGTCTCGACTTGGCTGGGCGTGATCTCACCGATTACCTCATGAAGATCCTGACTGAGC
GTGGTTACTCATTCACCACCACTGCTGAGCGGGAAATTGTGAGGGACGTGAAGGAGAAGCTGTCCTACATTGCCCTGGAC
TACGACCAGGAAATGGAGACTTCCAAGACCAGCTCTTCTGTGGAGAAGAGCTACGAGCTTCCTGATGGGCAGGTTATCAC
CATTGGTTCTGAGCGTTTCCGTTGCCCTGAGGTCCTCTTCCAGCCATCCTTCATTGGGATGGAAGCTGCAGGTATTCATG
AGACTACCTACAACTCCATCATGAAGTGCGACGTGGATATTAGGAAGGATCTGTACGGCAACATTGTTCTTAGTGGTGGT
ACCACTATGTTCACTGGAATCGCTGATAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAAGATTAAGGT
TGTTGCTCCTCCTGAAAGGAAGTACAGTGTCTGGATCGGAGGATCCATCTTGGCATCTCTCAGCACCTTCCAGCAGGTA-
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--
>chr5D_1167
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-----------------------------------------------------------------------AGGCCGGGT
TCGCCGGCGACGACGCGCCCCGGGCGGTGTTCCCCAGCATCGTGGGGCGGCCGCGGCACACGGGGGTCATGGTGGGCATG
GGGCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGTGGTATCCTCACCCTCAAGTACCCCATCGAGCACGG
CATCGTCTCCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGCGTGGCCCCCGAGGAGC
ACCCCGTCCTGCTCACCGAGGCGCCCCTCAACCCCAAGGCCAACCGTGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AACACCCCCGCCATGTACGTCGCCATCCAGGCCGTGCTCTCCCTCTACGCCTCCGGGCGAACCACCGGTACGTACGCCCG
CCCGCCCGCCATTGCATCTTCTTCTTCTCGTTTC----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTTCTTTCATTCATCGTGTCCACCGTGATCGATGACAAAC
AAACAAAAAAAACATTTGCAAGGTATCGTGCTCGACTCCGGTGACGGTGTGAGCCACACGGTGCCCATCTACGAGGGGTA
CGCGCTGCCCCACGCCATCCTCCGTCTCGACCTCGCCGGACGCGACCTCACCGACCACCTCATGAAGATCCTCACGGAGC
GCGGCTACTCCTTCACCACCACGGCGGAGCGCGAAATCGTCCGCGACATGAAGGAGAAGCTCTCCTACATCGCCCTCGAC
TACGACCAGGAGATGGAGACCTCCAAGACCAGCTCCTCCGTGGAGAAGAGCTACGAGCTGCCCGACGGCCAGGTCATCAC
CATCGGCGCCGAGCGCTTCCGCTGCCCGGAGGTGCTCTTTCAGCCATCCTTCATCGGGATGGAAGCCGCGGGGATCCACG
AGACCACCTACAACTCCATCATGAAGTGCGACGTGGACATCAGGAAGGACCTCTACGGCAACATCGTCCTCAGTGGTGGC
ACCACCATGTTCACCGGCATCGCCGACAGGATGAGCAAGGAGATCACCGCCCTCGCGCCCAGCTCCATGAAGATCAAGGT
CGTCGCCCCGCCCGAGAGGAAGTACAGTGTGTGGATCGGAGGCTCCATCCTCGCCTCCCTCAGCACCTTCCAGCAG----
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr5D_1592
--------------------------------------------------------------------------------
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---------------------------------------------------AGCCATACTGTGCCTATCTACGAGGGATA
TGCACTTCCTCATGCTATTCTCCGGCTGGATCTTGCGGGCCGTGATCTGACCGACTCCCTGATGAAGATCCTCACAGAAA
GGGGTTATTCCTTCACTACAACCGCTGAGCGGGAAATCGTAAGAGATATAAAGGAGAAGCTCGCCTATGTCGCCCTTGAC
TACGAGCAGGAGCTGGAGACCGCCAAGAGCAGCTCATCCGTCGAGAAGAGCTACGAACTGCCTGACGGGCAGGTCATCAC
GATCGGCGCCGAGAGGTTCAGGTGCCCGGAGGTGCTGTTCCAGCCCTCGCTGATCGGCATGGAGGCTCCTGGGATCCACG
AGACCACCTACAACTCCATCATGAAGTGCGACGTGGATATCAGGAAGGACCTGTACGGCAACATTGTGCTCAGTGGAGGG
ACGACCATGTTCCCCGGCATTGCAGACAGGATGAGCAAGGAGATCACCGCCCTCGCGCCGAGCAGCATGAAGATTAAGGT
CGTGGCGCCTCCAGAGAGGAAGTACAGTGTCTGGATCGGTGGCTCCATCCTTGCCTCCCTCAGCACATTCCAGCAGGTAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr5B_1592
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------AGCCATACTGTGCCGATCTATGAGGGATA
TGCACTTCCTCATGCTATTCTCCGGCTGGATCTTGCGGGCCGTGATCTGACCGACTCCCTGATGAAGATCCTCACAGAAA
GGGGTTATTCCTTCACTACAACCGCAGAGCGGGAAATCGTAAGAGATATAAAGGAGAAGCTCGCCTATGTCGCCCTTGAC
TATGAGCAGGAGCTGGAGACAGCCAAGAGCAGCTCGTCCGTCGAGAAGAGCTACGAGCTGCCTGACGGGCAGGTCATCAC
GATCGGCGCCGAGAGGTTCAGGTGCCCGGAGGTGCTGTTCCAGCCCTCGCTGATCGGCATGGAGGCTCCTGGGATCCACG
AGACCACCTACAACTCCATCATGAAGTGCGACGTGGATATCAGGAAGGACCTGTACGGCAACATTGTGCTCAGTGGAGGG
ACGACCATGTTCCCCGGCATCGCCGACCGGATGAGCAAGGAGATCACCGCCCTTGCACCGAGCAGCATGAAGATCAAGGT
CGTGGCGCCTCCCGAGAGGAAGTACAGTGTCTGGATCGGTGGTTCCATCCTCGCCTCCCTCAGCACATTCCAGCAGGTAC
--------------------------------------------------------------------------------
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--
>chr4A_1641
--------------------------------------------------------------------------------
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--------------------TCCGGCTGGATCTTGCGGGCCGTGATCTGACCGACTCCCTGATGAAGATCCTCACGGAGA
GGGGCTATTCCTTCACCACAACTGCTGAGCGGGAAATCGTAAGAGATATAAAGGAGAAGCTCGCCTACGTCGCCCTTGAC
TACGAGCAGGAGCTGGAGACCGCCAAGAGCAGCTCGTCCGTCGAGAAGAGCTACGAACTGCCTGACGGGCAGGTCATCAC
GATCGGCGCCGAGAGGTTCAGGTGCCCGGAGGTGCTGTTCCAGCCGTCGCTGATCGGCATGGAGGCTCCTGGGATCCACG
AGACCACCTACAACTCCATCATGAAGTGCGACGTGGATATCAGGAAGGACCTCTACGGCAACATTGTGCTCAGTGGAGGG
ACGACCATGTTCCCCGGCATCGCCGACAGGATGAGCAAGGAGATCACCGCCCTCGCGCCGAGCAGCATGAAGATCAAGGT
CGTGGCGCCTCCCGAGAGGAAGTATAGTGTCTGGATCGGTGGCTCCATCCTCGCCTCCCTCAGCACATTCCAGCAGGTAC
--------------------------------------------------------------------------------
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--
>SNPs
-------------------------------------------------------------------S------------
----S-----SS-S-----------------------------------------------S------------------
-------------------------------------------------------------S------------------
------------------------------------------------------------------------------S-
----------------------------------------SS-S-S-S-SSSS--S---S------SS-----S------
---------S----------------S-----------------------------------------------------
----S----------------S-----------S--------------------S-------------------------
--------------------------------------------------------S----------S---S--------
-----S----------------------SSSSS-------------------------------S---------------
-S-------S--------------------S---SS--------S-----------------------------------
S-------------S---S----S--------------------------------------------------------
--------------------------------S--------S-----------------------------S--------
-------------------SSS------------------S------------------------------S---SS---
-------------------------S------------------------------------------------------
S----------------------------------------S----S---------------------------------
---------------------------SSS----S------S--S--S--------------S-----------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SS--------S------------SSSS----------------------------------------------
---S-------------------------------S--------------------------------------------
------------S---------------------------------------------------------------S---
--------S-------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---S--------S-------S--------------------------------
-------------------SSS----------------------------------------------------------
---------------------------------------S--S------------------------S--S---------
----S---SS--------------------S----------S--------S--------------------S-----S-S
-S------------S--------S---S----S--------------SS-SS---------------S------------
----SSSSSSSSSSSSSS----S----------------------------------S-----S-------------S--
-------------------------S----------S-----------------S-------SSS---------------
-----S------------------------S--------S---------------------------SS----S------
-------------S-----------------------S-------------------S--SS-------S----------
--
>forward_388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGATTTCCTCCCCCTCCTCC------------
--------------------------------------------------------------------------------
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--
>reverse_2676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------AGAGTACGATGAAACCGGCC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_1263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------TGAACAACCGTCCTTCGTGT-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3362
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-AAATCGTGTCGGTGGCTGAT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
