>input_sequence_54177
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--------------------ATGGGCAAACTAGTTGCAGCAATAGGCAAGTTGCTCTGCTGTGTACAAGTGGACCAGTCA
ACAGTAGCCATCAAGGAAAGATTTGGGAAATTTGAGGATGTGCTTGATCCCGGGTGTCACTGTGTGCCATGGATTATCGG
AAGCCGTGTCAGTGGTAAGCTTACACTTAGGCTTAGGCAAATGGACGTTCGCTGTGAGACAAAGACAAAGGTACTCTTAC
AATTCACTTCTCGAATTATCCACTCAAAACACCCCCATGCATCACAAAAACTTGTAGAGATCACATTGATTTATGCGATC
TATTTTCTGCTGACACTATGCATCATCTTACAGGACAATGTTTTTGTTACAATTGTTGCATCCATTCAATACCGAGCAAT
GGAGGACAAAGCAAATGATGCGTACTATAAGCTGAGCAACCCAAAATCTCAAATCCAATCTTATGTCTTTGATGGTAAGG
ATTATCTTCTTAAAATATAGTAATTTCTGGAAATTCTCATGAATCGAAGAAAATTTTGGATATGTAAATGCTAAAAATCC
TCTCACGA-GATTCTTAACAAGGGTATATGATCTTGCAGTTATCAGAGCAAGCATTCCCAAACTACAACTGGATGATGTT
TTTGAGCAAAAGAACGACATAGCAAAATCTGTGGAGCAGGAGCTTGAGAAGGCTATGTTTGCTTATGGCTATGAGATTGT
GCAGACACTAATTGTTGATATAGAGCCAGATGAAAAGGTTAAAAAGGCTATGAATGAAATTAATGCCGGTAAGCGTTTGC
CTACTTGAGTAGAGCTTAGTTTGGAGTATGAACTGCTAAAATCTAGCATCAACTCAGGTGTTCCATTTATGTATTGCTAA
CAAACCTTAGGAGTAGTTCACATTAGGGTGTTGATATAGCTAATCTAAAACCCTAATG-TTTATCTATGCAGTTTGATGT
ATATGTATAACCATTTCTTTGTATTACGCTGTTCAGCTGCAAGAATGCGTGTTGCGGCAAATGAGAAGGCAGAGGCAGAA
AAGATCGTTCAAATCAAGAGAGCTGAGGGTGAGGCTGAAGCTAAGTATCTCTCTGGCCTTGGAATTGCAAGGCAGCGGCA
GGCAATAGTTGATGGCCTCAGAGACAGTGTGCTTGGCTTTTCTGGCAATGTGCCCGGGACTTCCGCCAAGGATGTGATGG
ACTTGGTTCTGCTCACCCAATACTTTGACACCATGAAAGAGATTGGTGCTTCATCCAAATCTTCTGCAGTTTTCCTCCCG
CATGGCCCAGGTGCCGTTGCAGACATTGCCAGTCAGATTCGCAATGGATTTCTTCAGGCGTCCACACATCATGCCTGA--
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--
>chr1D_1_TraesCS1D01G144600
AACGACAACTATCATTAAAGCCAGGTCTACGTTGACAACAGAATTAAATGCTTATTTAGCCAAGACTAGCATAACCAGCC
ATGGTATTGGGTTTGGTTGGCTGCAACTGATTCAAACAACAAAAATCCAAACCCG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCCTAAGAAGTTTCTCCCAGGCTACTGTGCAGATTCCGAAAAAGAAATGCTGGCGTTGACCTGGATACA
TATGACCCAACTACTCGTGTATAAAAGCACTCCCCATGCTCCTAGATAATTCAAGACAAAATCCAGTTATCCCATATCCT
CTTCAACAATCCGAACTATCTTCACCAGTTATCTCAAATCTTCAGCAGTGGCTGTGGTGCCAGTGCTCAAAGATCAAAAG
AGAGGTTAATGTAAGTCAGCTATACTACCTCCCCTTAACTTCTTCTATATTC----------CTATCCTGCTATAGGGGG
AAAGAGGTTATGTTACTGTCTAGTAATGCAAACAATGCAATAACTTATCGATCCTTCAAGTGTAAAGAAAAATCCGTCTG
AGATGAAACTAAATCGAGAGGAAAAAGAAGATGTTGAGGCAATCAGCCCACCAACAATAATTGGTGACAACATCATCTTT
CTTAGA-------TAACTTTCAATATATTGGCATATTGAAGTTAGCTTTCGGCAAACCACAAAGCTTTCCGAACCAAATT
ACAATTATTATTTTTGAAAATATACAAAGAATAATTCAGAAAATATGATTGCCTATTATGAAAACAAACAAAAAACCCAG
CAATATGTTAGCCTATTAAGCAAATAGTTAACGATCCGGTAATCTGCTGGCCAGTTAGTCATAGCTTGTATGGCTTTCAC
TATTTCATACAGGAGGATTACCTATATGTAGTTATGTACATCATTTTCTTGTATAGTGCTGCTGCAGCACACACATAATT
TGCCTGCAAAAAGTGACTGGGAATGATTTT---TT----TTAATCTGAAAGCTGTTGTAACATTGATTCATACCTTCATT
GTTTCAAGACAGAAATAAGAATGGGCAAACTAGTTGCAGCAATAGGCAAGTTGCTCTGCTGTGTACAAGTGGACCAGTCA
ACAGTAGCCATCAAGGAAAGATTTGGGAAATTTGAGGATGTGCTTGATCCCGGGTGTCACTGTGTGCCATGGATTATCGG
AAGCCGTGTCAGTGGTAAGCTTACACTTAGGCTTAGGCAAATGGACGTTCGCTGTGAGACAAAGACAAAGGTACTCTTAC
AATTCACTTCTCGAATTATCCACTCAAAACACCCCCATGCATCACAAAAACTTGTAGAGATCACATTGATTTATGCGATC
TATTTTCTGCTGACACTATGCATCATCTTACAGGACAATGTTTTTGTTACAATTGTTGCATCCATTCAATACCGAGCAAT
GGAGGACAAAGCAAATGATGCGTACTATAAGCTGAGCAACCCAAAATCTCAAATCCAATCTTATGTCTTTGATGGTAAGG
ATTATCTTCTTAAAATATAGTAATTTCTGGAAATTCTCATGAATCGAAGAAAATTTTGGATATGTAAATGCTAAAAATCC
TCTCACGA-GATTCTTAACAAGGGTATATGATCTTGCAGTTATCAGAGCAAGCATTCCCAAACTACAACTGGATGATGTT
TTTGAGCAAAAGAACGACATAGCAAAATCTGTGGAGCAGGAGCTTGAGAAGGCTATGTTTGCTTATGGCTATGAGATTGT
GCAGACACTAATTGTTGATATAGAGCCAGATGAAAAGGTTAAAAAGGCTATGAATGAAATTAATGCCGGTAAGCGTTTGC
CTACTTGAGTAGAGCTTAGTTTGGAGTATGAACTGCTAAAATCTAGCATCAACTCAGGTGTTCCATTTATGTATTGCTAA
CAAACCTTAGGAGTAGTTCACATTAGGGTGTTGATATAGCTAATCTAAAACCCTAATG-TTTATCTATGCAGTTTGATGT
ATATGTATAACCATTTCTTTGTATTACGCTGTTCAGCTGCAAGAATGCGTGTTGCGGCAAATGAGAAGGCAGAGGCAGAA
AAGATCGTTCAAATCAAGAGAGCTGAGGGTGAGGCTGAAGCTAAGTATCTCTCTGGCCTTGGAATTGCAAGGCAGCGGCA
GGCAATAGTTGATGGCCTCAGAGACAGTGTGCTTGGCTTTTCTGGCAATGTGCCCGGGACTTCCGCCAAGGATGTGATGG
ACTTGGTTCTGCTCACCCAATACTTTGACACCATGAAAGAGATTGGTGCTTCATCCAAATCTTCTGCAGTTTTCCTCCCG
CATGGCCCAGGTGCCGTTGCAGACATTGCCAGTCAGATTCGCAATGGATTTCTTCAGGCGTCCACACATCATGCCTGAAC
TGAACCCATGTGTACAAGAATTTGAATTGGTGAGGTCATTCCTACAGGCTCCTGGTTTGACATAAGAAAATGGTCCTTTA
AGCGCGTGATAATATTGTGTGAGTTTGT-----------------------------GGCTTGTGAGGTATCTATAAAAG
CTTGTAAAACGGTTTGTATTTTATTGTGTACTATCAGCTAGTCCGTAGAT-----------------------------A
AATGGAGCATGGGGACTTAAGATGGATGTATTGAATGATTATCATGTGGCTATACTTAGGCTTCTGAGAAAATAATGTTT
TTACATATTCTTTAAATTTAATATAAAGCTCTCGTTTCATATATTTCAGCGATAATTATACAATAACTCATCTTAGTCTC
GCTGAATTTCGTCAACTAGCACTACTCACAATCAAAACATGCAGTTTGAATCAAACTAAGAAACTGAGATCTAAATAAAT
AATTTAAAACATGTAATCAGAAGCATCGATGTTCGTGGATCATTGACTTAGCTCTGCTAAATGATGTAACATGAGTAGTA
CA-TGCACAGCTTAAATAAAACGGCACTATTTTGGGTGGGAAAGTGAACAGTTACCAGTTAAGATATGAACATTAGCTTA
ATCTCAT-------------------------------------------------------------CAACCAAAAAGA
GTTAGCAAGGCTATAATTCAAATTGGCCAATTTGGTAAGACATGATCCATTTCG---CATCACATATCATTTCAGACACC
GAGTGGAGATAAACTCACGCTGAAGGAATCATTGGATCACATTGTGTGCAGTAATCTTAAGCACATTTTGAACTACATAG
GTGCACAGGATAGTCATTGGCGGTATGATAATTAGTGGCACGGGAGATGATCAACTCCTAGACTGGACCGATTAGGGGCA
AAGACCCCCAACACTGATGTGTAATAAAATTGCAATATATATTACTCCCTCCGTCTCGTAATATAAGAGCTTTTTTTTAC
ACTAGTGTAAAAAACCCTCTTATATTATGGGACGGAGGGAGTAG-TACCTAACAGCCGGGATGGGCTTCAGTAAGGTCGA
CC
>chr1A_1
AACGACAACTATCATTAAAGCCCGGTCTACGTTGACAACGGAATTAAATGCTTATTTAGCCAAGACTATCATAACCAACC
ATGGTATTGGGTTTGGTTGGCTGCAACTGATTCAAACAACAAAAATCCAAACCCACCCTAAGGCTGGTCATAGTGGGAGT
AACATAGGTAGTAACATAGATGCCACATAAGCAAAAATGATGATGTGGCAAGTAGTTAATGAGGAGAGAGGCAAATAGAG
TAACATAATATGTTACCATCACATAGCGGTTTCCAATGCATAATGAGTCTACAAAGTAATAAATGAAGGCAACTATGTTA
CCACACCTATGACACTACCCACTATGAAGGTAGTAACATAGACTAGTAACATATATATGTTACTAGTCTAAGTTACTCCC
CACTATGACCAGCCTAAGAAGTTTCTCCCAGGCTACTGTGCAGATTCCAAAAGAGAAATGCTGGCGTTGACCTGGATACA
TATGACCCAACTACTCATGTATAAAAGCACTCCCCATGCTCCTAGACAATTCAAGACAAAATCCAGTTATCCCATATCCT
CTTCAACAATCTGAACTATCTTCACCAGTTAGGTCAAGTATTCAGCAGTGGTTGTGGTGCCAGTGCTCAAAGATCAGAAG
AGAGGTTAATGTAAGTCAACTATACCACCTCCCTTTAACTTCTTCTCTGCTCCTATCCTGCTCTA----------GGGGG
AAAGAAATTATGCTGCTGTCTTGTAATGCAAACAATGCAAAAACTTATCGATCCTTCAAGTGTAAAGAAAAATCCGTCTG
GGATGAAATTAAATC-AGAGGAAAAAGAAGATGTTGAGGCAATCAGCCCACCAACAATAATTGGTGACAACATCATCTTT
CTTAGA-------TAACTTACAATATATTGGCATTTTGAAGTTAGCTTTCGGCAAACCACAAAGCTTCCCGAACCAAATC
AAAATTATTATTTTTGAAAATATACAAAGAATAATTCAGCAAATATGATAACCTATTATGAAAACAAGCGAAAAACCCAG
CAATATGTTAATCTATTAAGCAGATAGTTAATGATTCGGTAATCTGTTGGCCAGTTAGTCATAGTTTGTATGGATCTCAC
TATTTCATACAGGAGGATTACCTATATGTAGT-ATGTACACCATTTTCTTGTATAGTGCTGCTACAGCACATAAATAATT
TGCCTGCAAAAAGTGACTGGCAATGAATTTATTTTTTAATTAATCTGAAAGCTGTTGTAACATTGATTCATACCTTCACT
GTTTCAAGACAGAGATAAGAATGGGCAAACTAGTTGCAGCAATAGGCAAGTTGCTTTGCTGTGTACAAGTGGACCAGTCA
ACAGTAGCCATCAAGGAACGATTTGGGAAATTTGAGGATGTGCTTGATCCGGGGTGTCACTGTGTGCCATGGATTATCGG
AAGCCGTGTCAGTGGTAAGCTTACACTTAGGCTTAGGCAAATGGATGTTCGCTGCGAGACAAAGACAAAGGTACTCTTAT
ATTTCACTTCTTGAATTATCCATTCAAAACACCCCCATGCATCACACAAACTTGTAGAGATCACATTAGTTTATGCGATC
TATTTTCTGCTGACACTATGCATCCTCTTACAGGATAACGTTTTTGTTACAATTGTTGCATCCATTCAATACCGAGCAAT
GGAGGACAAAGCAAATGATGCGTATTATAAGCTGAGCAACCCAAAATCTCAAATCCAATCTTATGTCTTTGATGGTAAGG
ATTATCCTCTTAAAATATAGTAATTTCTGGAAATTCTCGTGAATTGAAGAAATTTTTCTATATGTAAATGCTAAAAATCT
TCTCCAAGTGATTCTTAACAAGGGTATATGATCTTGCAGTTATCAGAGCAAGCATTCCCAAACTACAACTGGATGATGTT
TTTGAGCAAAAGAATGACATAGCAAAATCTGTGGAGCAGGAGCTTGAGAAGGCTATGTTTGCTTATGGCTATGAGATTGT
GCAGACACTAATTGTTGATATAGAGCCAGATGAAAAGGTTAAAAAGGCTATGAATGAAATTAATGCCGGTAAGCATTTGC
CTACTTGAGTAGAGCTTAGTTTGGAGTATCAACTGCTAAAATCTAGCAACAATGCAGGTGTTCCATGTATGTATTGCTAA
CAAACCTTAGGAGTAGTTCACATTAGGGTGTTGATATAGCTGATCTAAAACCCTAATGTTTTATCTAAGCAGTTTGATGT
ATATGTTTAACCATTTCTTTTTATTATGCTGTTCAGCTGCAAGAATGCGTGTTGCGGCAAATGAAAAGGCAGAGGCAGAA
AAGATCGTTCAAATCAAGAGAGCTGAGGGAGAGGCTGAAGCTAAGTATCTCTCTGGCCTTGGAATTGCAAGGCAGCGGCA
GGCAATAGTTGATGGCCTCAGAGACAGTGTGCTTGGCTTTTCTGGCAATGTGCCTGGGACTTCCGCCAAGGATGTGATGG
ACTTGGTTCTGCTCACTCAATACTTTGACACCATGAAAGAGATCGGCGCTTCATCCAAATCTTCTGCAGTTTTCCTCCCG
CATGGCCCAGGTGCTGTTGCAGACATTGCCAGTCAGATTCGCAATGGATTTCTTCAGGCGTCCACACATAATGCCTGAAC
TGAACCCATGTGTACAAGAATTTGAATTGGTGAGGTCAGTCCTACAGGCTCCTGGTTTGACATAAGAAAATGGTCCTTTA
GGCGCGTGATAATATTGTGTGAGTTTGT-----------------------------GACTTGTGAGATATCTACAGAAG
CTTGTAAAATGGTTTGTATTTTATAATG---TATCAGCTAGTCCTTAGATATCCGTAGATAAGTGCCTAAATATATACAA
AATGGAGCATGGGGACTTAAGATGGATGTATTGAATGGTTGTTGTGTGGCTATACTTGAGCTTCTGAGAAAATAATGTTT
CCACATCTTCTTTAAATTTAATATATAGCTTTGGTTTCATATATTTCAGCGATAATTATACAATAACTCATCTTAGTCCC
ACTGAATTTCCTC-ACTAGCACCACTCACAATCAAAACATGCAGTTTGAATCAAACTAAGAAACTGAGATCAAGTTAAAT
AATTTAAAACATGTAATCAGAAACATCAATGTTCGTGGATCATTAACTTAGCTC----------------------AGTA
CG-TGCACAGCTTAAATCAAACGGG-CTATTTTGGGTGGTAAAGTGGACAGTTATCAGGTAAGATATGAATATTAGCTTA
ACCTCAT-------------------------------------------------------------CAAACAAAAAGA
GTTAGCAAGGCTATAACTCAAATTGGCCAATTTGGCAAGACATGATCCATTTTG---CACCACATATCATTTCAGACACC
GAGTGAAGATAAACTCACATTGAAGGGATCATTGGATCATTGTC--TGCAGTAATCTTAAGCACATTTTGAACTACATAG
GTGCACAGGATAGTCATTGGCAGTATGATAATTAGTGGCACGGGAGATGATCAACTCCTGGACTGGATCGATCAGGGGAA
AAGG-CCCCAACACTGACGCATAATAAAATTGCAAG------TACTCCCTCCGTCCCATAATATAAGAGC----------
------------AACGCTCTTATATTATGGGACGGAGGGAGTATATACCTAACAGCCGAGATGGGCTTCAGTAAGGTCGG
CC
>chr1B_4
GACAGCTAG---CATTAATGCCAGGTCTACGTTGACAACAGATTTAAATGCTTATTTAGCCAAGACTAGCATAACCAGCC
ATGGTATTGGGTTTGGTTGGCTGCAACTGATTCAAACAACAAAAATCCAAAC----------------------------
--------------------------------------------------------------------------------
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--------CCACCCTAAGAAGTTTCTCCCAGGCTACTGTGCAGATTCCGAAAGAGAAATGCTGGCGTTGACCTGGGCACA
TATGACCCAACTACTCATGTATAAAAGCACTCCCCATGCTCCTAGACAATTCAAGACAAAATCCAGTTATCCCATATCCT
CTTCAACAATCCGAACTATCTTCACCAGTTAGCTCAAATCTTAAGCAGTGGTTGTGGCGCCAGTGCTCAAAGATCAGAAG
AGAGGTTAATGTAAGTCAACTATACTACCTCCCTTTAACTTCTTCTATGTTC----------CTA----------GCGGG
GAAGAGATTATGTTGCTGTCTTGTAATGCAAATAATGCAATAACTTATCCATCCTTCAAGTGTAAAGAAAAAACCGTCTG
AGATGAAATTAAATCGAGAGGAAAAAGAAG---TTGAGGCAATCAGCCCACCAACAATAATTGGTGACAACATCATATTT
CTTAGATACGGAGTAACTTTCAATATATTGGCATATTAAAGTTAGCTTTCGGCAAATCACAAAGCTTCCTGAACCAAATT
ATAATTATTATATTTGAAAATATACAAAGAATAATTCAGCAAATATGATAACCTATTATGGAAATAAACGGAAAACCCAG
CAATATGTTAACCTATTAAGCAGATAGTTAATGATTCGGTCATCTGTTGGCCAGTTAGTCATAGCTTGTATGGATTTCAC
TATTTCATACAGGAGGATTACCTATATGTAGTTATGTACACCATTTTCTTGTATAGTGCTGCTGCAGCACACACATAATT
TGCCTGCAAAAAGTGACTGGCAATGAATTTATTTT----TTAATCTGAAAGCTGTTGTAACATTGATTCATACCTTCACA
GTTTCAAGACAGAGATAAGAATGGGTAAACTAGTTGCAGCAATAGGCAAGTTGCTCTGCTGTGTACAAGTGGACCAGTCA
ACAGTAGCCATCAAGGAACGATTTGGGAAATTTGAGGATGTGCTTGATCCGGGGTGTCACTGTGTGCCATGGATTATCGG
AAGCCGTGTCAGTGGTAAGCTTACACTTAGGCTTAGGCAAATGGATGTTCGCTGCGAGACAAAGACAAAGGTACTCTTAT
ATTTCACTTCTTGAATTATCCATTCAAAACACCCCCATGCATCACACAAACTTGTAGAGATCACATTAGTTTATGCGATC
TATTTTCTGCTGACACCATGCATCCTCTTACAGGATAACGTTTTTGTTACAATTGTTGCATCCATTCAATACCGAGCAAT
GGAGGACAAAGCAAATGATGCGTATTATAAGCTGAGCAACCCAAAATCTCAAATCCAATCTTATGTCTTTGATGGTAAGG
ATTATCCTCTTAAAATATAGTAATTTCTGGAAATTCTCATGAATCGAAGAAATTTTTCTATATGTAAATGCTAAAAATCT
TCTCCAAGTGATTCTTAACAAGGGTATATGATCTTGCAGTTATCAGAGCAAGCATTCCCAAACTACAACTGGATGATGTT
TTTGAGCAAAAGAATGACATAGCAAAATCTGTGGAGCAGGAGCTTGAGAAAGCTATGTTTGCTTATGGCTATGAGATTGT
GCAGACACTAATTGTTGATATAGAGCCAGATGAAAAGGTTAAAAAGGCTATGAATGAAATTAATGCCGGTAAGCATTTGC
CTACTTGAGTAGAGCTTAGTTTGGAGTATGAACTGCTAAAATCTAGCATCAACGCAGGTGTTCCATGTATGTATTGCTAA
CAAACCTTAGGAGTAGTTCACGTTAGGGTGTTGATATAGCTGATCTAAAACCCTAATGTTTTATCTAAGCAGTTTGATGT
ATATGTATAACCATTTCTTTTTATTACGCTGTTCAGCTGCAAGAATGCGTGTTGCGGCAAATGAAAAGGCAGAGGCAGAA
AAGATCGTTCAAATCAAGAGAGCTGAGGGAGAGGCTGAAGCTAAGTATCTCTCTGGCCTTGGAATTGCAAGGCAGCGTCA
GGCAATAGTTGATGGCCTCAGAGACAGTGTGCTTGGCTTTTCTGGCAATGTGCCTGGGACTTCCGCTAAGGATGTGATGG
ACTTGGTTCTGCTCACTCAATACTTTGACACCATGAAAGAGATCGGTGCTTCATCCAAATCTTCTGCAGTTTTCCTCCCG
CACGGCCCAGGTGCTGTTGCAGACATTGCCAGTCAGATTCGCAATGGATTTCTTCAGTCGTCCACACATAATGCCTGAAC
TGAACCCATGTGTACAAGAATTTGAATTGGTGAGGTCATTCCTACAGGCTCCTGGTTTGACATAAGAAAATGGTCCTTTA
AGCGCGTGATAATATTGTGTGAGTTTGTTTTTTTGAAACGTTATTGTGTGAGTTTGTGACTTGTGAGATATCTACAAAAG
CTTGTAAAATGGTTTGTATTTTATAATG---TATCAGCTAGTCCTTAGATGTCCGTAGATAAGTGCCTAAATATATAGAA
AATGGAGCATGGGGACTAAAG-TGGATGTATTGAATGATTGTTGTGTGGCTATACTTGGGCTTCTGAGAAAATA-TGTTT
CCACATCTTCTTTAAATTTAATATATAGCTTTGGTTTCGTATATTTCAGCGATAATTATACAATAACTCATCTTAGTCTC
ACTGAATTTCCTCAGCTAGCACCACTCACAATCAAAACATGCAGTTTGAATCAAACTAAGAAACGGAGATCAAGTTAAAT
AATTTAAAACTTGTAATCAGAAGCATCAGTGTTAGTGGATCATTAAATTAGCTC----------------------AGTA
CGTTGCACAGCTTAAATCAAACGGCACTATTTTGGGTGGGAAAGTGAACAGTTATCAGTCAAGATATGAATATTAGCTTA
ACCTCACCAACCAAAAAGAGTTTTTTTCAACACAGTACAACGCAAGCGCTCATATATATGCCCATACACAACCAAAAAGA
GTTAGCAAGGCTATAACTCAAATTGGCCAATTTGGCAAGACATGATCCATTTCGCACCACCACATATCATTTCAGACACC
GAGTGAGGATAAACTCACACTGAAGAGATCATTGGATCATTGTC--TGTAGTAAACTTAAGCACATTTTGAACTACATAG
GTGCACAGGATAGTCATTGGCAGTATGATAATTAGCGGCACGGGAGATGATCAACTCCTGGACTGGATCGATCAGGGGAA
AAGG-CCCCAACACTGACGCATAATAAAATTGCAATATAGTATATAC---------------------------------
--------------------------------------------------------------------------------
--
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------S-----------------------------S---------------------------------
-------------------------------S-------------------S------------------------S---
------------------S--------------S--------------S----------------SSSSSSSSSS-----
------S-------S------S----------------------------------------------------------
--------S-----------------------------------------------------------------------
-------------------------------------------------------------------S------------
-S-------------------------------------S---------SS------------------S----------
----------S-----------S--------S---S----------S--------------------------S------
----------------------------------------S---------------------------------------
--------------------S-----S---------------------------------------------------S-
-------------S------------------------------------------------------------------
------------------S-------------------------------S-----------------------------
---------------------------------------------S--------S------------------------S
-S---------S----------S-----------------------S--------------------SS-----------
------------------------S----------S--S-----------------------------------------
------------------------S-------------------------------------------------------
------S---------------------------------------------S----SS--------------------S
----SSSS------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------S-----
-----------------------------------------------------S------------S-------------
-----------------------------------------S-------------------------S------------
--------------------S-------------------------------------------S---------------
-----------------------------S--------------------------------------------------
------------------------------------------------------S-------------------------
----------------S--------------------------S------------------------------------
--------------S------------------------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------------------------------S--------S------S-----
---------S--------------SS--SSS-------------S-----------------------------------
----------------------------------------S-SS-------------S----------------------
SS----S------------------S----S-S-----------------------------------------------
S---------S-----------S------------------------------------------------S-SS-----
---------------------------S----------------S---------SSSSSSSSSSSSSSSSSSSSSS----
-S---------------S------------------------------------S---------------S---------
-S------------------------------------------------------------------------------
----------------S------------------S-----------------------S--------------------
-----S------------S-------S------------SSS-SSS----------------------------------
---------------------S-------------------------------------S-------S----S-----S-
---SS------------S-SS------------------SSS-------------S-S------------SSSSSSSSSS
SSSSSSSSSSSS---S---------------------------S--------------S--------------------S
--
>forward_1221
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-GCCTGCAAAAAGTGACTGGG-----------------------------------------------------------
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--
>reverse_2630
--------------------------------------------------------------------------------
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---------------------------------------------------------------------CATGCCTGAAC
TGAACCCATG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--
>forward_2497
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------TGG
ACTTGGTTCTGCTCACC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3724
--------------------------------------------------------------------------------
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-------------------------------------------GTACCTAACAGCCGGGATGG-----------------
--
