>input_sequence_54118
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------------------------ATGGACGAGACCGGGAGGGCGGCGACCCCGATGGCGAGGAGATCCGCCTCCCCCAG
CGCCACCCCCACCACCGTCACGCCCGGCTCCACCGCCTCCTCCTGCTCCTCC----------------------------
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-------------------------AACTCCGACCCCGCGGCGGCGGCGCGGACGCCCCCGCCCGCCTACCTCGTCCCGT
GGGCGCGCC------CCGCGGGCGGCGGCAGCGGATACTACCCCGGCTGCCGCAAGGACGCCAACTGCGCCTGCGAGATC
TGCCTCGCCAGCATCAACGCCACGCGGGACCTCCTCCCGCCCGAGGCCGCCTCCGCGCGCCGCTGCTTCGCCGCTGCCGC
CAGGGACAGGAGGCCCGGGACCCGCTCGCTCTTCCTCGCCCGCGACGGCGCCGCCACGCCCGGGTCCGCCGTCACCGAGC
CGTGGACGCCGCCGCTGCGCTCCACCGCCAAGTCGAGGCGGGATGCGGAGGC---CGCCAAGGCCCGGAGGTCCTCGTCG
CCCGACTGGGCGCTGTACGCGCTGACGGTTCTTGGGTTCTTGCTCCTGCTGTGGGTGGACACGGGGCTCGTCCCGGAGGT
CGCGGCCAGGGGGTTCGGCCCCAAGCTGTCGCCGGGGGCCGTCGCGCGGATGGGCCGGGAGGCGCGCCTTGCGCCTGCAG
GTCTGGGCCACAAACTGCGCTCCTTGGAGCGAGGGGTCGGGCAGCTCGTCGGCGCCGACAGGATCTCCAACTGCAGCTCC
AAGGATTCCGTCTGGCGACTCCAGCAGGTTCGCC---------CTTCTTGCGTGTCAGTCACCTTACTGAATCTTGGCTG
CAGAGACGGTTTTTCATTGACGAATTCTTTCCCTTGCAGAATGATCAGCATTTGTTCCATTGGCGCTGCTCGCTATACAA
GTCGGCGGCAGAGGAGGTCAGCATCTGGGGGAGCCCTCTCCGGAGCTCCGGCCTGCTCCCGTCTACGCTCTCGACACGGC
ACATCACCATCCTCTCCGGCAAGGTCACGGAGGTAATCGA----CAGAATCTCCACTATCAATCCCAACATTACTTCATC
ACCCGAACCACCAGTAGCAGATAACTGAAATCCAT----------GTCT----GGTATTTGTTTGCAGTGGTCGGACGGG
AGCGTATTGCCGACGGTGAGGGCGAGCAACGGCAGCTCCTGGAGCTACCGGGGCCGGAGCGCAGCGGCGGTGCTGCTGGA
ACCAGAGACGTGGGTGCTGGAGTACCAGAGGAGCGTGCTGTTCGAGGGGACACGGCTGCTACCGGCCACGGTGGAGCTGC
TGGCGTCGAGGTGCTCGGAAATGGCGAAACGGGCGCGGCGGAAGCTGTCCAAGAAGCGGTTCC---ACGGCGGGATCCAG
GCGAAGCCGACTTGA-----------------------------------------------------------------
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>chr5D_1_TraesCS5D01G395200
TCGGCCCATGGTCAGCCACACCGCCGCGGTCACCAAAGCACGAGCAGGAGCCACGGGAGGAGATGGTGCAGGCGCCTCCG
GCACA---------------------------------------GGAGCCCCCGGTCTGGCAGGGGCCGCCAACCCACCT
GTGGTAGCCACCGCCCTACGTCGACCTCACC-GACGACGACGATGAGTAGGACGGTGACTCCTGAAGATGACGACGGCCA
CCGGCGACGAGCC-TTTATCTAC----TTCTTTTATGTCTTTATTAAGTTTTAGTTTAATT-------------AACTTT
GGTACTATGGACGTATGGACGT-------------TTTATGTTTATATTTATGT-TTTGGTATTATTTGCAAGTTTATTT
TCTT--TTTTTTTGG----TAAAAAATCGAAGTCCAC-AATCCGGACGGTTTGGGACGAGACGTGTCCGTTAGACGCACC
GATGGCCGCACGACCGC-AAGCGGACGGCCGTGTCCGTTTT----CCTGCCCCAAACGAACGAAAAA-CAGCCAAATCGG
ACGTCCGTTTAGGATCGTGTGTAGAAGTTGGCATGAGGCCATCCAGAAAGACGGTTGTGAGGCCGCAAGTGAGTACGTGT
GGTGGATCCGATCCGGCCACCGGTGCGGGCGCATGGATAGGATCGAATACTCGCTCTTCCAATCTGTCCCAGTACCCGGG
GCGTTCGCCAATTAA-TTTTCTATTGATATGATGATGCCAAGAGATCAGTAAAAAC-AACTTAACTGCAACAGAAACAAA
CAAACTGAACCTGTGCTTACGGATGAAATAAACTGAGATAGTGATTGCACAC-------------CCCCCTCGATGCGTC
TGCTCTTCCGTGTTCGCAACTCAGAAGTGATTAAAAGGGGCAACAGGCCCTACCTGTCAGCGCCGCAACAGCCAACACAA
GGAAACTCGG---GTCGACCGTTGCTCGCGGATGCCGTTGGCGTCGGGCACTTCCCCTCCATCCACTTCAAATTTCGAAC
CCCTGCCCTCTCCCTCTCCGCCCCCAAT-CCACCGCCGCCGCCTCCCCTCATAGC-------------------------
---------------CCCCGATCCATGGACGAGACCGGGAGGGCGGCGACCCCGATGGCGAGGAGATCCGCCTCCCCCAG
CGCCACCCCCACCACCGTCACGCCCGGCTCCACCGCCTCCTCCTGCTCCTCC----------------------------
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-------------------------AACTCCGACCCCGCGGCGGCGGCGCGGACGCCCCCGCCCGCCTACCTCGTCCCGT
GGGCGCGCC------CCGCGGGCGGCGGCAGCGGATACTACCCCGGCTGCCGCAAGGACGCCAACTGCGCCTGCGAGATC
TGCCTCGCCAGCATCAACGCCACGCGGGACCTCCTCCCGCCCGAGGCCGCCTCCGCGCGCCGCTGCTTCGCCGCTGCCGC
CAGGGACAGGAGGCCCGGGACCCGCTCGCTCTTCCTCGCCCGCGACGGCGCCGCCACGCCCGGGTCCGCCGTCACCGAGC
CGTGGACGCCGCCGCTGCGCTCCACCGCCAAGTCGAGGCGGGATGCGGAGGC---CGCCAAGGCCCGGAGGTCCTCGTCG
CCCGACTGGGCGCTGTACGCGCTGACGGTTCTTGGGTTCTTGCTCCTGCTGTGGGTGGACACGGGGCTCGTCCCGGAGGT
CGCGGCCAGGGGGTTCGGCCCCAAGCTGTCGCCGGGGGCCGTCGCGCGGATGGGCCGGGAGGCGCGCCTTGCGCCTGCAG
GTCTGGGCCACAAACTGCGCTCCTTGGAGCGAGGGGTCGGGCAGCTCGTCGGCGCCGACAGGATCTCCAACTGCAGCTCC
AAGGATTCCGTCTGGCGACTCCAGCAGGTTCGCC---------CTTCTTGCGTGTCAGTCACCTTACTGAATCTTGGCTG
CAGAGACGGTTTTTCATTGACGAATTCTTTCCCTTGCAGAATGATCAGCATTTGTTCCATTGGCGCTGCTCGCTATACAA
GTCGGCGGCAGAGGAGGTCAGCATCTGGGGGAGCCCTCTCCGGAGCTCCGGCCTGCTCCCGTCTACGCTCTCGACACGGC
ACATCACCATCCTCTCCGGCAAGGTCACGGAGGTAATCGA----CAGAATCTCCACTATCAATCCCAACATTACTTCATC
ACCCGAACCACCAGTAGCAGATAACTGAAATCCAT----------GTCT----GGTATTTGTTTGCAGTGGTCGGACGGG
AGCGTATTGCCGACGGTGAGGGCGAGCAACGGCAGCTCCTGGAGCTACCGGGGCCGGAGCGCAGCGGCGGTGCTGCTGGA
ACCAGAGACGTGGGTGCTGGAGTACCAGAGGAGCGTGCTGTTCGAGGGGACACGGCTGCTACCGGCCACGGTGGAGCTGC
TGGCGTCGAGGTGCTCGGAAATGGCGAAACGGGCGCGGCGGAAGCTGTCCAAGAAGCGGTTCC---ACGGCGGGATCCAG
GCGAAGCCGACTTGACCTGCAGACAGGGCGATTTTTAGCTTTAGCATGTTGGATCATCTCATTTCCTGTGAGATTGGTAG
GAATATCCCGTGTTCTTTTGGTTGTAGTGATGTGTACTGTCTGCTTTTTCATCGGATCAGCTCGTTGATTAGTGGCTGAT
CACGGTACCTCTACTATGAATGCATAATGTTTGGAACGTACAACCCGGTAGAATTTCAGGGGAATTTT------------
-GCAGTTGGTTGGCATTGGTCAGACAAACTTCGGTCATGTTTGGAACATAGGAATTCAGG-AACACTAGAACAGAAAACC
ACAGATATACAGGCATGG---TACCCAAGAACTACTGTTTCCTTCCAAAATCCTTGTTGGAA-TTTCAGAGGTTTATGAG
CTAC----------------------------------------------------------------------------
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-------------------------------------------TTTTCATCTGAAACAACACCTTGAAGGCTTTACAGAT
CGAAGGAATGGAAATCCAAAAATATATACAAAAAAAATTGTTTAGGAAAGAAAATGTGAAAAGGAGGATTCTGAAGCATA
A--------------GTGGTTCAGAATGAAAAGAAGAATTTTGCGAGTACCCTATGCGAATGATGGCAGTGTAAAGTGGA
GACATATATAAAAAGACTAATATGAGCATCGTTCCTATGATCCAAATGCATCTAGGTCTAGGGAATAAATTCCTAAGGTT
---------------------------ATTTCTTTGTTCCAATGGGGCCGA-----------------------AACTCT
TCGCTGCCTAAAGCTTACAAAAATCT--TAAATCTCCAG--CGCTAGCAAATAAACGACAGGA-----------------
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---------------------------------------------------------------------------GAGCT
GCATCAAAATCACTTTGCATAGCAGCTACATGAATGAATCCTACACAAC-ACAATTCCAAGATAGACATCAGGGAAACAC
GCAACTGAAGCAACAAATGCAGGAAAGGGGTATAGT--------------------------------------------
-----------ATAGCCTCCCCTGTTCCAGGTTGCCAAATTTG----------------------------------CTC
CATCTCGCAGTTGCGACAGCAGCAACCTATAACTTGGTTGCACCATCATATCGACAAATCACAGAATAAACACAAATTAC
CAGCATAGTCATCAATGAACTCTGAATGTACGATTAAAGTCT
>chr5D_1
TCGCCCCATGGTCAGCCACACCGCCGCGGTCACCAGAGCACGAGGAGGAGCCATGGGAGGAGGTGGTGTAGGCGCCTCCG
GCGCA---------------------------------------GGCGCCACCGGTCTGGTAGGGGCCGCCAGCACACCT
GTGGAAGGCACCGCCCTACGTCGACCTCACC-GGCAACGACGACGAGTAGGACGGCGACTCTTGAAGACGACGACGGCCA
CCGGCGACGGCCTTT---AT--CT--ACTTTTTATGTCTTTTATTAAGTTTTAGTTTAATTAAGACCCG--TGGTACTAT
GGACGTATGGGCGTATGGACGT-------------TTTATGTTTATATTCATGT-TTTCGTATTATTTGCAAGTTTATTT
TCTT--TATTTTTGGGG--CAAAAATAAGAAGGCCACGACCCTGGACAGTTTGGGGCGAGGCGTGCCCGTTGGGCGCACC
GATGCCCACACGACAGCAAAGCGGACGGCCGTGTCCATTTT----CCTGCCCCAAACGGACAAAAAA-CGGACAAACAGG
ACGTCTATTTGGGGTCGCGCGTTGGAGTTGGC------------------------------------------------
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>chr5B_1
TCGGCCCATGGTCAGCCACACCGTTGCGGTCACATGAGCACGAGCAGGAGCCATGGGAGGTAGTGGTGCAGGCGCCTCCG
GCGCA---------------------------------------GGCACCCCTGGTCTGGCAGGGGCCGCCAACCCACCT
GTGGCAGCCACCGCCCTACGTCGACTGAACT-GGCGACGACGATGAGTAGGACGGTGACTCCTGAAGACGATGGCGGCCA
TCGGTGACGAGCC-TTTATCTA------TTTTTATGTCTTTTATTAAGTTTTAGTTTAATTAAGACCAGCGTTGAACTTT
GGTACTATGGACGTATGGACGT-------------TTTATGTCTATATTTATGT-TTTCGTATAATTTACGAGTTTATTT
TCTCTCTTTTTTTGG----CAAAAAATCGAAGTCCAC-AACCCAGGCGGTTTGGGATGAGGCGTGCCTGTTAGGCGCACC
GATGGCCACACGATTGC-AAGCGGACGGTCCTGTCCGTTTT----CCTGCCCCGAACGGACGAAAAA-CAGACAAATCGA
ACATCCGTTTGAGGTCGCGTGTTGAAGTTGGCATGAGGCCATCTAGAAAGACGATTGTGAGGCTGCGAGTGAGTACGTGT
GGTGGATCCGATCCGGCCACCGGTGGGGGCGCATGGATAGGATCGAATACTCGCTCTTCCAATCCGTCCCAGTATCCGGG
ACGTTCGCCTATTAACTTTTCTATTGATATGATGAT--------------------------------------------
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>chr4B_1
TCGGCCCATGGTCAGCCCGACCGCCGTGGTCACCAGAGCACGAGCAGGAGCCATGAGAGGAGGTGGTCTAGGCGCCTCCG
GTGCA---------------------------------------GGTGCCCCCCGTCTGGCAGGGGCCGCCAGCCCACCT
GTGGCAGCCACCGCCCTACGTCGACCTCACC-GACGGCGACGACGAGTAGGAAGGCGACTCCTGAAGACGACGGCGGCCA
CCGGTGACGGGCC-TTTTAT--CT--ACTTTTCATGTCTTTTATTAAGTTTTAGTTTAATTAAGACCTACGTTGAACTTT
GGTACTATCGACGTATGGGTGTATCATATGGATACTTTATGTTTATATTCATGT-TGCCGTATTACTTGCAAGTTTATTT
TCTT--TTTTATTTGGAGCAAAATTTT-GAAGTACACAACCCCGAACGGTTTGGGACGAGGCGTGCCCGGTGGGTGCACC
GATGCCCGCACGACCGC-AAGCGGACGACCGTGTCCATTTT----CCTGCACCAAACGGACGAAAAAGCGGACGAACCGG
ACGTTCGTTTGGGGTTGCGTGTTGGAGTTGGC------------------------------------------------
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>chr1B_1
TCGGCCCATGGTCAGCAACGCCCCTGCGGTCACCGGAGCAGGAGCAGGAGCCACAGGAGGAGGTGGTGCAGGTGCCACCG
G---------------------------------------------CACCTCCGGTCT-GCAGGGGCCGCTAGCCCACCT
GTGGCAGCCACCGCCCTACGTCGACCTCACC-G-CGACAACGACGCGTAGGACGACGACCCCTGAAGGCGACAACGACCA
CTGGCGACGGGCC-TTTATCTAC----TTTTTTATGTCTTTTATTAAGGTTTAGTTTAATTAAGACCCGCGTTGAACATT
GGTACTATGGACGTATGGACGT-------------TTTATGTTTATATTCATGT-TTTTGTATTATTTGCAAGTTTATTT
TCTC--TTTTTT--GGG--CAAAAATCTGAAGTCGACGACCCTGGACGGTTTGGGACGAGTCATGCACGTTGGCCGCATC
GATGCCTGCACGACCGC-AAGCGGACGGCCGTGTCCGTTTT----T--GTTCCAAACGGACGAAAAG-CGGACGAACCGG
CCGTCCATTTGGGATCACGCGTTAGAGTTGGC------------------------------------------------
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>chr3D_1
TCGGCCCATGGTCTGCCCCGCTGCCGCGGTCACCAAAGCACGAGCAGGAGCCACGGGAGGAGGTGGTGTTGGCGCCTCCG
GCGCT---------------------------------------------CCAGGTCTCGCAGGGGTCGCGAGCCCACCT
GCGGCAGCCACCGCTCTACGTCGACCTCACCAG-CGATGACGACAAGTAGGACGGCGACTCCTGAAGACGACAGCGGCCA
CCGGCAACGGCCC-T---AT--CT--ATTTTTTATGTCTTTTATTTAGTTTTAC---------GACCTGCGTTGAACTTT
GGTACTATGGGCGTATGGACGT-------T-----TTTATGTTTATATTTATGTTTTTCGTATTATTTGCAAGTTTATTT
TGTT--TTTTTG--CA---AAAAAATC-AAAGTCCATAAATCCGGACGTTTTGGGTTGAGGCATGCCCGTTGGGCACAAC
GATGGCCGCACGACCGC-AAGCAGACGGTCGTGCCTGTTTT----CCTGCACCAAACGGACAAAAAG-CGGACGAACTGG
ACGTCTGATTGGGGTCGCGCGTTGGAGTTGGCCTGA--------------------------------------------
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>chr2D_1
TCGGCCCATGGTCAGCCACACCACCGCGGTCACCAGAGCACAAGCAGGAGCCAAGGGAGGAGGTGGT-------------
-----------------GCA------------------------GGCGCCCCCGGTCTGGCAGGGGCCACCAGCCCACCT
GTGGCAGCCACCGCCCTACGTCGACCTCACCGG-CGACGACGACGAGTAGGACGACGACTCCTGAAGACGACGGCGGCCA
CCGGCGACGGGCC-TTTATCTACT--TTTTTTTATGTCTTTTATTAAGTTTTAGTTTAATTAAGACCTGCGTTGAACTTT
GGTACTATGGATGTATGGACGTATGAATGT-----TTTATGTTTATATTCATGA-TTTCGTATTATTTGTAAGTTTATTT
TTTT--AG----------CAAAAAATT-GAAGTCTATGACCCCGGACGGTTTGGGACGATGCGTACACGTTGGGTGCACC
GATGACCACACGACCGC-AAGCGGACGGCCGTGTCCGTTTT----TCCGCCTCAAACGGACAAAAAA-CGGACGAACCGG
ATGTTCGTTTGGGGTCGTGCGTTGAAGTTGGC------------------------------------------------
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>chr7A_1
TCGGCCCATGGTCAGCCACACCGCCGCGGTCACCAGAGCACGAGTAGGAGCCACGGGAGGAGGTGGTATAGGCGCCTCCG
GCGCAGGAGCCACCGGCGCA------------------------TGCGCCACCGGTCTGGCAGGGGCCGCCAGCCCACCT
GTGGCAGCCACCGCCCTACGTCGACCTCACCGG-CGACGACAACGAGTAGGACGACGACTCCTGAAGACAACAGCGGCCA
CCGACGAGGGCCTTT---AT--CTACTTTTTTTATGTATTTTATTAAGTTTTAGTTTAATTCAGACATG----------T
GGTACTATGGACGTATGGGCGTGTGGACGG-----TTTTTGTTTATATTCATG--TTTCGTATTATTTGTCAGTTTATTT
TCTT--TATTTTTAAGG--CAAAAATAAGAAGGCCACAACCCCAGATGGTTCGGAGCGATGTGTGCCCGTTGAGTCCATC
GATGCCCGCATGACCGC-AAGTGGACGGCCGGGTCTGTTTTATAAT--GTTCCAAACGAACTAAAAA-CAGACGAACCGG
ATGTCCGTTTGGG-------------------------------------------------------------------
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>chr5A_3
--GGCCCATGGTCAGCCACGCCGCCGCGGTCACCAGAGCACAAGCAGGAGCCACGGGAGGAGGTGGT-------------
-----------------GCACGCGTTGTCA---------------GCGCCCCCGGTCTGGCAGGGGCCGCCAACCCACTT
TTGGCAGCCACGGCCCTACGTCGGCCTCACCGG-CGACGACGACGAGTAGGACGGCGACTCGTGAAGACAAAGGCTGCCA
CCGGCGACGGTCC-TTTATCTGG---TTCTTTTATGTCTTTTATTAGGTTTTAATTTAATTAAGACCTGCGTTGAACTCT
GGTACTATGGACGTTTGGATG--------------TTTATGTTTATATTTATGT-TCTTGTACTATTTGCAAGTTTATTT
TCTT--TTTTGG--GGG--CAAAAATC-GAAGTCCACAACCCCAGATGGTTTGGGACGAGGTGTGTCGGTTGGGCGCACC
AATGGCCGCACGACCGC-AAGCAGATGGCCGTGCCCGTTTT----CCTGCCCCAAACGGACGAAAAG-CGGACGAACCAG
ACGTCCGTTTGGGATCGTGCGTTGGAGTTGGC------------------------------------------------
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>chr3B_3
--GGCTCATGGTCAGCAACGCCACCGCGCTCGCCGGAGCAGAGGAAAGAGCCATGGGAGGAGGTGAT-------------
-----------------GCAGGCTCCATCAGTGCAGGCGGCGCCGGCGCCTCCGGTCTGGCAGGGGCCGTCAGCCCACCT
GTGGCAGCCACCGCTCTACGTCGACCTCTGCAG-TGACGACGACGAGTAGGA-GGCAACTCCTGAAGACGACAACGGCCA
CCGGCGACGAGCC-TTTATCTAC----TTTTTTATGTCTTTTATTGAGTTTTAGTTTAATTAAGATCTGCGTTGAATTTT
GGTACTATGAAGGTATGGGCG---------------TTATGTTTATATTCATGT-TTTCCTACTTTTTGCGAGTTGATTT
TCTT--CCTTTT--GT---CAAAAATT-AAAGTTCACGACCCCAGAAGGTCA-GGGCGAGGTGTGCCTGTTGAGCGCACC
GTTACCCGCACGACCAT-AAGCGGACGGTTGTATCCGTTTT----TCTGCCCCAAACGAACAAAAAG-CGGATGAA-TGA
ACGTCCGTTTCAGGTCGCGCGTTGGAGTTGGC------------------------------------------------
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>chr2D_3
--GGCACATGGTCAGCCACACCGCCGTGGTCCGCAGAGCAGGAGTAGGAGCCATGGGAGGAGGTGAT-------------
-----------------GCAGGCACT---------------GCCGGCGCCCCCGGTCTGGCAGGGGCCGCCAGCCCACCA
TTGACAGCCACTACCCTACATTGACCTCACCAA-CGACAACGACGAGTAGGACGACGACTCCTGAAGACGACGACGGCCA
CCGGCGACGGTCA-TTTATCTAG----TTTTTTATGTATTTTATTAAGTTTTAGTTTAATTAAGACCTGCGTTGAACTTT
GGTACTATGGATGTATGGACA--------------TTTATGTTTATATTTATGT-TTTCGTATTATTTGCAAGTTTATTT
TTTT--TA----------GAAAAAATC-AAAGTCCACAATCCCGGACGGTTTGGGACGAGGCATGCCAGTTGGGCACACC
GATGGCCGCACGACCGC-AAGCGGAAGGCCGTGTTTGTTTT----TCTGCG-CAAACGAATGAAAAG-CGGATGAACCAG
ACGTCCGTTTGGGGTCGTGCGTTGGAGTT---------------------------------------------------
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>chr5B_662
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---------------------------TATGATGCTGCCAAGAGATCAGTAAAAACAAACTTGACTGCAACAGAAACAAA
CAAACTGAACTTGTGCTTACGGATGAAATAAACTGAGATAGTGATTGCACACTCCGCGTCATGCGCCCTCTCGACGCGTC
TGCTCTTCCGTGTTCGCAACTCACAAGTGATTAAAAGGGGCAACAGGGCCTACCTGTCAGCGCCGCAACAGCGAACACAA
GGAAACTCGGGCCGTCGACCGTTGCTCGCGGATGCCGTTGGCGTCGGGCACTTCCCCTCCATCCGCTTCAAATTTCGAAC
CCTTCC-CTCTCTCT----GCCCCCAATCCCACCGCCGCCGCCCCTCCTCATAACCCCAACCCAACCCCCGAACCAACCC
AGCCCGCAACCCCAACCCCGATCCATGGACGA---------------GACCCCGATGGCGAGGAGATCCGCCTCCCCCAC
CGCCACCCCCACCACCGTAACGCCCGGCTCCACCGCCTCCTCCTGCTCCTCC----------------------------
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-------------------------AACTCCGACCCCGCGGCG------CGGACGCCCCCGCCCGCCTACCTCGTCCCGT
GGGCGCGCCCCGCCGCCGAGGGCGGCGGCAGGGGCTACTACCCCGGCTGCCGCAAGGACGCCAACTGCGCCTGCGAGATC
TGCCTCGCCAGCATCAACGCCACGCGGGACCTCCTCCCGCCCGAGGCCGCCTCCGCGCGCCGCTGCTTCGCCGCCGCCGC
CAGGGACCGGAGGCCCGGGACGCGCTCGCTCTTCCTCGCGCGCGACGGCGGCGCCACGCCCGGGTCCGCGGTCACCGAGC
CGTGGACGCCGCCGCTGCGCTCCACCGCCAAGTCGAGGCGGGATGCGGCGGC---CGCCAAGGCCCGGAGGTCCTCGTCG
CCCGACTGGGCGCTCTACGCGCTGACGGTTCTTGGGTTCTTGCTCCTGCTGTGGGTGGACACGGGGCTCGTCCCGGAGGT
CGCGGCCAGGGGGTTCGGCCCCAAGCTGTCGCCGGAGGCCGTCGCGCGGATGGGCCAGGAGGCGCGCCTTGCGCCTGCCG
ACCTCGGCCACAAACTGCGCTTCCTGGAGCGAGGGGTCCGGCAGCTCGTCGGCGCCGACAGGATCTCCAACTGCAGCTCG
AAGGATTCCGTCTGGCGACTCCAGCAGGTTCGCCATTCTTGCTGTTCTTGCGTGTCAGTCAACTTACTGAGTCTTGGCTG
CAGAGACAGTTCCTCATTGAAGAATTCTTTTTCTTTCAGAATGATCAGCATTTGTTCCATTGGCGCTGCTCACTATACAA
GACGGCGGCAGAGGAGGTCAGCATCTGGGGGAGCCCGCTCCGGACCTCCGGCCTACTCCCGTCCACGCTCTCGACACGGC
ACATCACCATCCTCTCCGGCAAGGTCACGGAGGTAATCGA----CAGAATGTCCACTATCAACGCCAACATTTCTTCATC
ACCTGAACCACCAGTAGCAGCTAGCTGAAACTGAAAGCCATGTCCGTCT----GGTATTTGTTTGCAGTGGTCGGACGGG
AGCGTGTTGCCGACGGTGAGGGCGAGCAACGGCAGCTCCTGGAGCTACCGGGGCCGGAGCGCAGCGGCGGTGCTGCTGGA
ACCAGAGACGTGGGTGCTGGAGTACCAGAGGAGCGTGCTGTTCGAGGGGACACGGCTGCTGCCGGCCACGGTGGAGCTGC
TGGCGTCCAGGTGCTCGGAGATGGCGAAACGGGCGCGGCGGAAGCTGTCCAAGAAGCGGTTCC---GCGGCGGGATCCAG
GCGAAGCCGACTTGACCTGCAGACAGGGCGATTTTTAGCTTTAGCATGTTGGATCATCTCATTTCCTGTGAGATTTC---
------------------------------------CTGTCTGCTATTTCATCGGATC-GCTCGTTGATTAGTGGCTGAT
CACGGTACCTCTACTATGAATGCATAATGTTTGGAACTTACAATCCGGTAGAATTTCAGGGGAATTTTGCTGGAGTACAC
TGCAGTTAGTTGGCATTGCTTAGACACGCTTTGGAACACAAATCAG----GGAATTCAAG-AACACTAGTAG--------
------TATGCAGTGGCATGTTACCCAAGAACTACAGTTTTCTTCCGAAATTCTTGTTGGAATTTCCAGAGGTTTATGAG
CTAC----------------------------------------------------------------------------
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-------------------------------------------TTTTCGTCTGAAACAACACCTTGAGGCCTTTACAGAT
CAAAGGAATGGAAATCCAAAAATATA--CAAAAAAAAT-GTTTAGAAAAGAAAATGTGAAAAAGAGGACTCTGAAGCATA
AGAAAATCAAGAAATGTGGTTTAGAATGAAAAGAAGAATTTTGCAAGTACCATATGCGGATGATGGCAGTGTGAAGTGGA
GACATATATAAAAAGACCAATATGAGCATCGTTCCTATGATCCAAATGCATCTAGG------GAATAAATTCCTAAGGTT
---------------------------ATTTCTTCGTTCCAATGGGGCCGAAACATCTGTGTCCATTTGCTAGCAACTCT
TCGCTGCCTAAAGTTTACAAAAATCT--TAAATCTCCAGCACGCTAGCGAATAAACGACAGGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCGAT
GCATCAAAATCACTTTGCATAGCAG---------------CTACACAAC-ACAATTCCAAGATAGACATCAGGGAAACAG
GCAACTGAAGCAGCAAATGCAGGAAAGGGGAATTGTGGCATACTGGCATCTGCTGCACAATTCC----------------
--------AAGATAGCCTCCCCTGTTCCAGGTTGCCAAATTTTCAAGATATTCCCCTGTTCCAGGTTGCCAAATTTTCTC
CATCTCGCAGTTACGACAGCAGCAACCTATAACTTGGTTGTACCATCATGTCGACAAATCACAGAATAAACACAAATTAC
CAGCATAGTCATCACTGAACTCTGAATGTACGATTAAAGTCT
>chr5A_766
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-----------------------------------------------------------------CCCTCTTGATGCATC
TCCTCTCCCGTGTTCGCAACCCAGAAAAAA-TAAAAGGGGCAACAGGGCCCACCTGTCAGCGCCACGACATCGAACATAA
GGAAACTCGG---GTCGACCGTTACTCGCGGAAGCCGTTGGCGTCGGGCACTTCCCCTCCATCCACTTCAAATTTCGAAC
CCTTCG-CTCTCCCTCTCCGCCCCCAAT-CCGCCGCCGCCGCCTCCCCTCATAACCCCAACCCACCCCCCAAACCAACCC
CAGCCCCACCCCCAACCCCGATCCATGGACGAGACCTGGAGGGCGGCGACCCCGATGGCGAGGAGATCCGCCTCCCCCAG
CGCCACCCCCACCACCGTCACGCCCGGCTCCACCGCCTCCTCCTGCTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTGCTCCTCCAACTCCGACCCCGCCGCG------CGGACGCCCCCGCCCGCCTACCTCGTCCCCT
GGGCGCGCGGG---GCCGAGGGCGGCGGCAGGGGCTACTACCCCGGCTGCCGCAAGGACGCCAACTGCGCCTGCGAGATC
TGCCTCGCCAGCATCAACGCCACGCGGGACCTCCTCCCGCCCGAGGCCGCCTCCGCGCGCCGCTGCTTCGCCGCCGCCGC
CAGGGACCGCAGGCCCGGGACGCGCTCGCTCTTCCTCGCT---------------ACGCCCGGGTCCGCGGTCACCGAGC
CGTGGACGCCGCCGCTGCGCTCCACCGCCAAGTCGAGGCGGGATGCGGCGGCGGCCGCCAAGGCCCGGAGGTCCTCGTCG
CCCGACTGGGCGCTCTACGCGCTGACGGTTCTTGGGTTCTTGCTCCTGCTGTGGGTGGACACGGGCCTCGTCCCGGAGGT
CGCCGCCAGGGGGTTCGGCCCCAAGCTGTCTTCGGACGCCGTCGCGCGGATGGGCCAGGAGGCGCGCCTTGCGCCTGCAG
CTCTGGGCCACAAACTGCGCTCCTTGGAGCGAGGGGTCGGGCAGCTCGTCGGCGCCGACGGGATCTCCAACTGCAGCTCC
AAGGATTCCGTCTGGCGACTCCAGCAGGTTCGCC---------GTTCTTGCGTGTCAGTCAACTAATTTGCTCTTGGCTG
CAGAGACGGTTCTTCACTGACGAATTC-TTTTCTTTCAGAATGATCAGCATTTGTTCCATTGGCGCTGCTCGCTATACAA
GTCGGCGGCAGAGGAGGTCAGCGTCTGGGGGAGCCCTCTCCGGACCTCCGGCCTGCTCCCGTCTACGCTCTCCACACGGC
ACATCACCATCCTCTCCGGCAAGGTCACGGAGGTAATCGACATTCAGAATGTCCACTATCAATGCCAAGATTACTTCATC
ACCCGAACCACCAGCATCAGATAACTGAAATCCAT----------GTCCGTCCGGTATCTGTTTGCAGTGGTCTGACGGG
AGCGTATTGCCGACGGTGAGGGCGAGCAACGGGAGCTCCTGGAGCTACCGGGGCCGGAGGGCAGCGGCGGTGCTGCTGGA
ACCAGAGACGTGGGTGCTGGAGTACCAGAGGAGCGTGCTGTTCGAGGGCACACGGCTGCTGCCGGCCACGGTGGAGCTGC
TGGCGTCCAGGTGCTCGACTATGGCGAAACGGGCGCGGCAGAAGTTGGCCAAGAAGCGGTTCTACGGCGGCGGGATCCAG
GCGAAGCCGACTTGATCTGCAGCCAGGGTGA-TTTTAGCTTTAG---GTTGGTTCATCTCATTTCCTGTGAGATTTGTAG
GGATATCCCGTCTTCTTATGGTTGTAGTGATGTCTGCTGTCTGCTATTTCATCGGATT-GCTCCCTGATCTGTGGCTGAT
CACAGTACCTCTAGTATGAATGCATAATGTTTGGAACATACAATCTGGTAAAATTTCAGGGGAATTTTAC----------
----------TGGCATCGCTCAGACACGCTTTGGTCATGTTTGGAATATAGGAATTAAAAAAACACTGGAACAGAAAACC
ACAAGATATACAGTGGTATGTGA-CCAAGAACTACAGTTTTCTTCCAAAATCCCA-TTGGAA-TTTCAGAGGTTTTTGCT
GCGCCTCAACGCATTTCGGGGAGAACCAACTAGCTCCCGGCTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTG
ATTCTTCAACATCAGTCATAGATGCCCTAACAAAACTTTGTAAGAAGATATCGCGAGCAATAGTTGAGGATCGAATCTTG
AATAGGTGCCCTAATAAGATTTTTTTTTCCGTCTTATATTTTGATGAGGATGGAGTATTTCTCGAATCTTGAATCTGAAG
GCCTCAATCTAAGGCCGGGCAATAGCCATTATCTAAAAAGAATACATCTTGAGAAATAGTTGAGGATCAAACTCTATCTC
AAAATAATAATAAAATATGTTTTACTACCAACCACAAGCTTTATGTTAGGCACAATGCTCATACAGCAACTTATGAGCAA
GAATTGCTCTATCAATCACCATCTACATTAGATATATCTTCTGAAACTTTTTTCATCTGAAACAACGCCTGAAACAACTC
CAATACCTTACTATAAATTACCGAATTGGGAGGGGAGAAGCTATTTTCATCTGAAACAACGCCTCGAGGCCTTTGCGGAT
CGAAAATCAGG----------------------AAACCTGGTTTGGATAGAAAACATGGTT-------------------
----------------------------------------------------TACGCAAAGGATGACAGTGTAAAATGGG
AACAT----AAAAAGACTAGTATGAGCATCGTTCCTATGATCCAAATGCCTCTAGG------GAAGAAATTTCCTCATGT
TTATAATCCTAAAGAAAATTGATGTTAATTCCTTTGTTCCAATGGGGCCTAAACATCTGCGTCCATTTGCTAGCAACTTT
TGGCTGCCTAAACTTTACAAAATCTTGCTAAATCTCCGGTGCCCTAGCAATTGAACACACCTGATGACTGCAATCAGGAA
CAGGCTTATTCTGGCAGCAAATATTGGATGCAGTAGATTGGTTGTGGAGTCGGATTGTATGTGTGCTGTGGGGGTTATGT
TGACTGGTGATCATTTTGGAGTGTAAGCAGCTTGCAATGGAATTTGCTAATGTTTCCTTTACTCACTGCTTCAGAGAAGC
GAATGAGGCTGCCGATAGCTTAGCGAAAAACTCTTTTAGCACTAGACCTTCCACTTTATGGGATGATTCAATCACTGATT
TCATTTCTCATGTTCTTGTAAACAATATGATTAACATTTGAGGAATAAACACTGTCAAAAACAAATTGTGTGGTTTGTTT
GAGCAAATCCGTTCCTACATGCCATAGGAGTGAGGCCTTCTAAACGTTACCCCAAACATATACTAATACTATTAGGAGAT
GCATCAAAATCTCGTATCACAGCAGCTACATGAATGAATCCTACATAACTACAATTCCAAGATAAACATCACGGGAACTC
GCAACTGAAACAACAAAATGCAGCAGTGTTTTTCTGGTTATAGCCTCCCTTTCCCAGGTTGCTGCTGTTGCAACTGCATG
ATGCAGAAAAAATAGCCTCCCCTTTTCCAGGTCGCCAAATTTTCCCA---------------------------------
-ATCTCGCAGTTGCGACAGCAGCAACCTGTAACATGGTGGTGCTATCTTGTCGGAAAATCACAGAATAAACACAAATTAC
CAGCAGAATCATCACTGGACA--GAATGTACGATTAAAGTCT
>chr5D_1512
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-------------------------------------TCATGCTCCTACTATGGGTGGACACGGGGCTCATCCCGGAGGT
CGTGGCCCGGGGGTTCGGCCCCAAGCTGTCTTCGGACGCCGTCGCGCGGTTGGGCCAAGAGGCGTGCCTTGCGCCTGCAG
GTCTAGGCCACAAACTGCGCTCCTTGGAGCGAGGGGTCGGGCAGCTCATCGGCGCCGACAGGATCTCCAACTGCAGCTCG
AAGGATTCCGTCTGGCGACTCCAGCAGGTTCGCC---------GTTCTTGTGTGTCAATCAACTTATTTCCTCTTGGCTG
TAGAGACAGTTCTTCATAGACGAAATA-TTTTCTTTCAGAATGATCAGCATTTGTTCCATTGGCGCTGCTCACTCTACAA
GTCGGCTGCAGAGGAGGTCAGCATCTGGGGGAGCCCTCTCCGGAGCTCAGGCCTGCTCCCGTCTACGCTCTTGACACGGC
ACATCACCATCCTCTCCGGCAAGCTCACCGAGATAATTGA----CAGAATGTCGACTATCAATGCCAATATTACTTCATC
ACCCGAACCACCAGTAGCAGATAACTGAAATCCAT----------GTCTT----GTATTTGTTTGCGGTGGTCGGATGGG
AGCGTATTGCCGATGGTGAGTGCGAGCAATGGGAGCTCCTGGAGCTACCGGGGCTGGAGTGCAGCAGCAGTGCTGCTAGA
ACCAGAGGTGTGGGTGCTGGAGTACCAGAGGAGCGTGCTGTTCGAGGGCACACGGCTGCTGCCGGCCACGGTGGAGCTGC
TGGCGTCCAGGTGCTCGGAAATGGCGAAACGGAGCG--------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>SNPs
--------------------------------------------------------------S-----------------
--S-------------------------------------------S---------------------------------
----S---------------------------------------------------------------S-----------
-----------------------------S---SSSSSS-----------------------------------------
----------------------------------------------------------S---------------------
-------------------S----------------------------------------S------------S------
-----------------------------------------------------------------------S--------
----------S-----------S--------------------S---------S---------S--S-------------
-------------------------S--------------------------------------S---------S-----
S--------S----------------------------------------------------S-----------------
----------S---------------------------------------------------------S-----------
-----------------------------------------------S------------------------S-------
--------------------------------------------------------------------------------
--S-S-S----------------------------------------------S--------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSSSSS-------------------------------
------------------S------------S--S---------------------------------------------
--------------------------------------------------------------------------S-----
-------S-------------S-----------------S----------S------------------S----------
------------------------------------------------S-------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------S--------------------S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------S--------S---------
-----------S------------------SS---S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------S----------------------------------------------------------S-------------
---------------------------------------------------------------------------S----
-S---------S-----S---------------S-S---------S------------S---------------------
-------------------------------------S-----S------------------------------------
-------S----------S-------SS---S--------------S-----------S---------------------
---SSSSSSSSS-SSSSS-----------------S----S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-S----------
--------------------------SS----------------------------------S-----S-----------
---------------------S----------------------S------S----------------------------
--------------------------------------------------------SSSSSS------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------S--------S------------------------------
--------------S---------------------------
>forward_624
--------------------------------------------------------------------------------
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--------------------------------------------AGAAAGACGGTTGTGAGGCC----------------
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>reverse_3084
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-------------------------------------------CCCGGTAGAATTTCAGGGGA-----------------
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------------------------------------------
