>input_sequence_54092
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------------------------------------------------------------------ATGTGCACCAGAGG
CCACTGGAGGCCGTCGGAGGACGAGAGGCTCAAGGAGCTCGTCGCGCGGTACGGGCCGCACAACTGGAACGCCATCGCCG
AGAAGCTCCAGGGCCGATCAGGTACGGGACATG-CATGTATGCATGCATGAGCATCAACCGATCATGTGTGGAATTAATG
AATCTCTCTTATTGGCTAATTAGGTGTACTTTGTGTTCCGTTAAGGCGCAATCCGGTTCCGTTAAGCTTATCTGACTTTT
GGGGGATTTCTTG----TTAGTCCACGAGAGAATTTCGATTTGTTAGGGTGTCATGCTCACCTTGATGTGCATATGGCAT
CTCTTTCACTTGTGGAGCAATTTTAT---CTCGCTAGCTAGCCACTGAGAGAGTTAATTTTACCTTTCTTGCTTCCTAAT
TCATCTTTCGCGCACAAGCTAGCTATCCATGGTGTCGTTG-AAGCACATCGCCTAAGCTTAATTAATC------------
---AACCCATGGAAAATGACCTGTTCTCTGTCTGTGATT------TCAGGGAAGAGCTGCAGGCTGAGGTGGTTCAACCA
GCTGGACCCGAGGATCAACCGGAGCCCCTTCTCGGAGGAGGAGGAGGAGCTGCTCCTGGCCTCGCACCGCGTCCACGGCA
ACCGGTGGGCCGTCATCGCCAGGCTCTTCCCGGGCCGCACCGACAACGCCGTCAAGAACCACTGGCATGTGATCATGGCC
CGCCGGTGCAGGGAGCGGATGAGGCTGTCGTCCAACAGACGTGCCACGCCCGCCGCCGCCGCCTCCACCACCACGGCCGG
TGCCGAGAAAGACGATAGCCCTAGGAACACCGCCGCCGGCGAGAAGCCGAGACTTCCGCAGGCGAATACCATGGCCGCCT
TGCTCCACAAGTACCGCAGAGAATTTGCTGCCCCCTTCGCGATCAGCCATCACAGTAGCAAGGAGGGTTACTGCTCATAC
ACGAATGAAGGTGAAATGAATGATCCATTGCATGCATGCAGGGTTCTAGTATACAGA-CGTTTTCTCATTAGTTTAGCTT
GTATGTCTGGAATGAATCAATTAGGGTTTGTTT----TGCAGATACGAATAGATCGGTGGAGTTCTACGATTTCCTCCAG
GTGAACGTGAGCTCGAGCGACACCAAGTGCGGCTCGAGCATC---------GAGGAGAACCGGGACGACGACGACGATCA
GCAAGCCGAAGGGCAGGTGTCGCTCATAGATTTCATGGAGGTTGGGACTTCCCGTCAGTGATTTATCTTATCTATATATG
--------TTATGGGTCAGTATTTAACTAGGGGTGGTGCATCCAAAGCAGCTTGTAATGCTTTGTGAGGAGGCCGGCCGG
GGCATGCTACATCTGTAG--------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr4D_1_TraesCS4D01G052600
GGTCT-GTGAAAGACAGTAACAAATGATCTCTCTGAAAGGCACATATGTGTATAACAGTGATCCAACCTGCAGGCTTAAT
TAATTATTGCACCAGCTTAATTAATTACAAGATAAGCACAAGCTAGCTAGCACAGAATAACATTGGTTTGGCCAAGTTGA
TTTGTTAAGTAATAAAAAGTCACGACAGAATTTGTTGTAATTATTAGTTGTAACTCTCAAATCAACTGTTGCTATAATTA
ATACAAGCCACCGGT-TGCCGCAAAGGTCATAGTATAGTAAGTTGTTGGCATTTCTCCATGACACGTCACACATGCTTGG
AGACACAAACACACACAAGAAAACACAAACAGTGTGCTTAATTTGGTTTCTTTTCCGTATGTTGTTTGTTGAGCAATTGT
AACTGG---CGAGACACTGCTGCACATATAGTTCGTTGATCTTGTGGACCTAGCTAGCTCTAGCTATAGATAGCATGTAA
CTAACATTTTCTATTCCGCTCTCGCGAAGCTTAACGTACAAAACCACCCGTTAGCGCACACGTAGCATCAAACTAACTCC
GGTGTAACCATCTCCCAACTCGCTATCTTCTCCCTCACTAACCGATCAACAATAACGAG----AGCTAGCACGCTGGGGT
TGGCCAGTTAGAGAGAGAGAGAGAGAGAAACTGCCTGCTCATCACTTTCCCTTGGCCCC-TCTCCCCACCTTTCTATCTA
TCTATATATCCGCCACCCCTTATCTTTCTCTTGCCTCTTCTCATCCTGCCGATC----TTTGTCTCTTCTCTTCCCTTCT
CTCTCTCT-----TTGTTCATCTCTCTCCAGTGGCC-TCGAATCGATCGATCTGCGTCTGAAATTAGTTTAGTTAGTTTA
--TTATTCTTTTGCTGCTGTTTATGTGCAGCTAGCCTCACAAATCTAATTATATATTTAAGAGATAGCTAGCTAAAGGG-
---ATCGACAGAGGTTAGAGCGATTTGCTGCTATTCTTTGCTGCTTGGTTGATCGATCGATCGAGGATGTGCACCAGAGG
CCACTGGAGGCCGTCGGAGGACGAGAGGCTCAAGGAGCTCGTCGCGCGGTACGGGCCGCACAACTGGAACGCCATCGCCG
AGAAGCTCCAGGGCCGATCAGGTACGGGACATG-CATGTATGCATGCATGAGCATCAACCGATCATGTGTGGAATTAATG
AATCTCTCTTATTGGCTAATTAGGTGTACTTTGTGTTCCGTTAAGGCGCAATCCGGTTCCGTTAAGCTTATCTGACTTTT
GGGGGATTTCTTG----TTAGTCCACGAGAGAATTTCGATTTGTTAGGGTGTCATGCTCACCTTGATGTGCATATGGCAT
CTCTTTCACTTGTGGAGCAATTTTAT---CTCGCTAGCTAGCCACTGAGAGAGTTAATTTTACCTTTCTTGCTTCCTAAT
TCATCTTTCGCGCACAAGCTAGCTATCCATGGTGTCGTTG-AAGCACATCGCCTAAGCTTAATTAATC------------
---AACCCATGGAAAATGACCTGTTCTCTGTCTGTGATT------TCAGGGAAGAGCTGCAGGCTGAGGTGGTTCAACCA
GCTGGACCCGAGGATCAACCGGAGCCCCTTCTCGGAGGAGGAGGAGGAGCTGCTCCTGGCCTCGCACCGCGTCCACGGCA
ACCGGTGGGCCGTCATCGCCAGGCTCTTCCCGGGCCGCACCGACAACGCCGTCAAGAACCACTGGCATGTGATCATGGCC
CGCCGGTGCAGGGAGCGGATGAGGCTGTCGTCCAACAGACGTGCCACGCCCGCCGCCGCCGCCTCCACCACCACGGCCGG
TGCCGAGAAAGACGATAGCCCTAGGAACACCGCCGCCGGCGAGAAGCCGAGACTTCCGCAGGCGAATACCATGGCCGCCT
TGCTCCACAAGTACCGCAGAGAATTTGCTGCCCCCTTCGCGATCAGCCATCACAGTAGCAAGGAGGGTTACTGCTCATAC
ACGAATGAAGGTGAAATGAATGATCCATTGCATGCATGCAGGGTTCTAGTATACAGA-CGTTTTCTCATTAGTTTAGCTT
GTATGTCTGGAATGAATCAATTAGGGTTTGTTT----TGCAGATACGAATAGATCGGTGGAGTTCTACGATTTCCTCCAG
GTGAACGTGAGCTCGAGCGACACCAAGTGCGGCTCGAGCATC---------GAGGAGAACCGGGACGACGACGACGATCA
GCAAGCCGAAGGGCAGGTGTCGCTCATAGATTTCATGGAGGTTGGGACTTCCCGTCAGTGATTTATCTTATCTATATATG
--------TTATGGGTCAGTATTTAACTAGGGGTGGTGCATCCAAAGCAGCTTGTAATGCTTTGTGAGGAGGCCGGCCGG
GGCATGCTACATCTGTAGCAATCTAACACCAAATATACTTATAGAGGAAGCTAAGCAAAATGCAAACGTATATATATGAC
ATGCACATGTAATTTATTGATGT---------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------ACGCACACATGCATGTATATGCCCGTCCATGCAGAGTTCTTCTTGAG
ATATGGAGAACGAGGCTTTTCTCTCATCATTTGTAAATTTAATTAATAATAAACATTTTTTTGTTCTCATTTAATATGTT
TAATTATTGGTTATTCTGGGTTTTTTT-----AGGGTTTTAATCAGTCTCATGGGATTTTTTTTGATGTTTTAATCAGTC
ATTTAATCTGTTTGATTATTGGTTATTATGGGTTTTTAATCAGTTATGAGATATTTTTTTCCCTCGGACCTTCCACTATC
AAAGATAACAGAATAGTCCCATGGTGTATTGTACCTGCCAGTCCATCAGAGATTATTATTTTTTGATAAAGAGAGCACCC
TCTCTGCTTTTCATATATCAGAAACAACTTGTCTTTTGTTACAACTACCAGGGACTAGAAGCAGTAAAAGGAAATAAAAT
GATGCACAATCATGGCAGAACAA---GAGCTAGACTCGTCTATCTGCCAAGATCACAAAACAGCTAAGGCTATATCAGCA
TAACCGTCGATAACCTACAGACAGTTAAAACGACTCCAACAACATAAACCCCCCGGGAGCACCACAAGCTAGGCTCTTCA
GGGAATGGCAGTCCATCAGAGATTGAACCTCATTTTTGTTGCTCTCTATGTCTCATT-AAGATGGAGGTGACTTTCGCTA
AACTTGACACTCATGGAGCCTTTAGTACGCGCCACTAGAAGGATGTGTGTGCTTATGTATGCTAGGGTCGTAT-CTATGA
TTATGATTTTATCAGATATGTCTTGTTGATTACGATATTACGGTATAGGCGTTTATGACCTTCCCTTCTATGCCATGTGG
TAATGATTTTTTGAAAATAATAACATATACCACAACGGTGCCGTCCGTAGATTGG-TTTCACTTGCATGTATGCAGAGT
>chr4A_1
GGTCT-GTGAAAGACAGTAACAAATGATCTCTCTGAAAGGCACATATGTAATAT--AGTGATCCAACCTGCAGGCTTAAT
TAATTATTGCACCAGCTTAATTAATTACAAGATAAGCACAAGCTAGCTAGCACAGAATAACATTGGTTTGGCCAAACTGA
TTTGTTAAGTAATAAAAAATCACAACAGAATTTGTTGTAATTATTAGTTGTAACTCTCAAATCAACTGTTGCTATAA---
-TATAAGCCACCGG-TTGCCGCAAATGTCATAG--TAGTAAGTTGTTGGCATTTGTCCATGACACGTCACACATGCTTGG
GGACACAAACACACACAAGAAAACACAAACAGTGAGCTTAAA-TGGTTTCTTTTCCGTATGTTGTTTGTTGAGCAAATGT
AACTGGTGGCGAGACACTGCAGAT----TAGTTCGTTGATCTTGTGGACCTAGCTAGCTCTAGCTATAGATAGCATGTAA
CTAACATTTTCTATTCCCCTCTCGCGAAGCTTAACGTACAAAACCACCCGTTAGCGCACACGTAGCATCAAACTAACTCC
GGTGTAACCATCTCCCAACTCGCTATCTTCTCCCTCACTAACCGATCAACAATAACGAG----AGCT----CGCCGGGGT
TGGCCAGTT----AGAC--AGAGAGAGAAACTGCCTGCTCATCACTTTCCCTTGGCCCCCTCTCCCCACCTTTCTATCTA
TCTATATATCCCCCACCTCTTATCTTTCTCTTGCCTCTTCTCATCCTGCCGATC----TTTGTCTCTTCTCTTCCCTTCT
CTCTCTTTGCATCTTGTTCATCTCTCTCCAGTGGCCCTCGAATCGATCGATCTTGGTCTTAAACTAGCTTTAGTTAGTTA
GTTCATTCTTTTGCTGCTGTTTATGTGCAGCTAGCTTTTCAAATCTAATTATATATTTAAGAGATAGCTAGCTAGAGGG-
---ATCCATAGAGGTTAGAGAGATTTGTTGCT---------TATTTGGGCGATCGATCGAGGGAGGATGTGCACCAGAGG
CCACTGGAGGCCGTCGGAGGACGAGAGGCTCAAGGAGCTCGTCGCGCGGTACGGGCCGCACAACTGGAACGCCATCGCCG
AGAAGCTCCAGGGCCGATCAGGTACGAGACATG-CATGTATGCATGCATGATCATCAACCGATCATCTGTGGAATTAATG
AATCTCTCTTATTGGCTAATTAGGTGTACTTTGTGTTCCGTTAAGGCGCAATCCGGTTCCGTTAAGCTTATCTGACTTTT
GGGGGATTTCTTGTTAATTAGTCCACGAGAGAATTTCGATTTGTTAGGGTGTCATGCTCACCTTGATGTGCATATGGCAT
CTCTATCACTTGTGGAGCAATTTTATCTACTAGCTTGCTAGCCACTTAGAGAGTTAATTTTACCTTTCTTGGTTCCTAAT
TCATCTATCGCGCACAAGCTATCTATCCATGGTGTCGTTGCAAGCACATCGCCTAAGCTTCTTAGATGATTAATTAACGA
GAAAACCCATGGAAAATGACCTGTTG------TGTCTGTGATTTCTCAGGGAAGAGCTGCAGGCTGAGGTGGTTCAACCA
GCTGGACCCGAGGATCAACCGGAGCCCCTTCTCGGAGGAGGAGGAGGAGCTGCTCCTGGCCTCGCACCGCGTCCATGGCA
ACCGGTGGGCCGTCATCGCGAGGCTCTTCCCGGGCCGCACCGACAACGCCGTCAAGAACCACTGGCATGTGATCATGGCG
CGCCGGTGCAGGGAGCGGATGAGGCTGTCGTCCAACAGACGTGCCACGCCCGCCGCCGCC---TCCACCACCACCGCCGG
TGCCGAGAAAGACGAGAGCCCTAAGAACACCACGGGCGGCGAGAAGCCGAGACTTCCGGAGACGAATACCATGGCCGCCT
TGCTCCATAAGTACCGCAGAGAATTTGCTGCCCCCTTCGCGATCAGCCATCACAGTAGCAAGGAGGGTTACTGCTCATCC
ACGAATGAAGGTGAAATGATTGATCCATTGCATGCATGCAGGGTTCTAGTATACAGAGCGTTCTCCCATCAGTTTAGCTT
GTATGTCTGGAATGAGTCAATTAGGGTTTGTTT----TGCAGATACGAATAGATCGGTGGAGTTCTACGATTTCCTCCAG
GTGAACGTGAGCTCGAGCGACACCAAGTGCGGCTCGAGCATC---------GAGGAGAACCGGGACGACGACGACGATCA
GCAAGCCGAAGGGCAGGTGTCGCTCATAGATTTCATGGAGGTTGGGACTTCTCGTCAGTGATTTATCTTATCTATATGTG
--------TTATGGGTCAGTATTTAACTAGGGGTGGTGCATCCAAAGCAGCTTGTAATGCTTTGTGAGGAGGCCGG----
GCCATGCTACATCTGTAGCAATCTAACACCAAATATACTTATAGAGGAAGCTAAGCGAAATGCAAAAGTATATATATGAC
ATGTACATTTAATTTATTGATGT---------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------ACGCACACATGCATGTATATGCCCGTCCATGCAGAGTTCTTCGTGAG
ATATGGAGAACGAGGCTTTTCTCTCATCATTTGTAAATTTAATTAATAATAAACA-TTTTTTGTTCTCATTTAATATGTT
TAATTATTGGTTTATG-----------------GGGTTTTAATCAGTCATGGGATG-TTTTTTTTATGTTTTAATAAGTC
ATTTAATCTGTTTGATTATTGGTTATTATGGGGTTTTAATCAGTCATGAGATAGTTTTTCCCCTAGGACCTTCCACTGTC
AAAGATAACAGAATAGTCCCCTTGTATATTGTACCCGCGAGTCCATCAGAGATTATTATTTTTTGATAAAGAGAGCCCCC
TCTCCACTTTCCATATATCAGAA-CCACTTGTCTTTTGTTACAACTACCAGGGACTAGAAGCAGCAAAAGGAAATAAAAA
GATGCACAATCCTGGCAGAACAGCACGAGCTAGACTCGTCTGTCTGCCAAGATCACAAAACAGCTAAGGCTATATCGGCA
TAGCTGTTGATAACCTACAAACAGTTAAAATGACTGCGGCAACATAAA-------------------------CTCTCCA
GGGAATGGCAGTCCATCAGAGATTGAACCTCATTTTTGTTGCTCTCTATGTCTCATTAAAGATGGAGGTGACTTTCACTA
AACTTGACACTCACGGAGCCTTTAGTACGCATTACTAGAAGGATGTGTGTGCTTATGTATGCTAGGATCATATTCTATTA
TTACGATTTTATCATATGTGGTTTGTTGATTCCAGTATTCCGGTATAGGCGTTTATGACCACCCCCTCTATGTCATGTGG
TAATG--------------------------------------------------------------------------
>chr4B_1
GGTCTTGTGAAAGACAGTAACAAATGATCTCTCTGAAAGGCACATATGT-ATAT--AGTGATCCAACCTGCAGGCTTAAT
TAATTATTGCACCAGCTTAATTAATCACATGTTTACAACACA--AGCTAGCACAGAATAACATTGGTTTGGCCAAATTGA
TTTGTTAAGTAATAAAAAGTCACAACAGAATTTGTCGTAATTATTAGTTGTAACTCACAAATCAACTGTTGCTAGTA-TA
ATATAAGCCACCGGTTTGCCGCAAATGTCATAG--TAGTAAGTTGTTGGCCTTTGTCCATGACACGTCACACATG----G
AGACACAAACACACACAAGAAAACACAAACAGTGTGCTTAATTTGGTATATCTTCCGTATGTTGTTTGTTGAGCAAATGT
AACTGG---CGAGACACTGCACATA-------TCGTTGATCTTGTGGACCTAGCTCTA---AGCTTTAGATAGCATGTAA
CTAACATTTTCTATTCT-CTCTCGTGAAGCTTAACGTACAAAACCACCCGTTAGCCCACACGTAGCATCAAACTAACTCC
GGTGTAACCATCTCCCAACTCGCTATCTTCTCCCTCACTAACCGATCAACAATAACGAGAGCTAGCT----CGCTGGGGT
TGGCCAGTT----AGAGAGAGAGAGAGAAACTGCCTGCTCATCACTTTCCCTTGGCCCC-TCTCCCCACCTTTCTATCTA
TCTATATATCCCCCACTCCTTATCTTTCTCTTGCCTCTTCTCATCCTGCCGATCGATCTTTGTCTCTTCTCTTCCCTTCC
CTCTCT-------TTGTTCATCTCTCTCCAGTGGCC-TCGGATCGACCGATCTGCGTCTGAAATTAGTTTAGTTA--TTA
GTTTATTCTTTTGCTGCTGTCTATGTGCAGCTAGCCTTACAAATCTAATTATATATTTAAGAGGTAGCCAGCTGGAGGGA
TCGATCGATAGAGGTTACAGCGATTTGCTGCTGTTGTTTG-TGGTTGGTTGATCGATCGACCGAGGATGTGCACCAGAGG
CCACTGGAGGCCGTCGGAGGACGAGAGGCTCAAGGAGCTCGTCGCGCGGTACGGGCCGCACAACTGGAACGCCATCGCCG
AGAAGCTCCAGGGCCGATCAGGTACGATAGATACCATGTATGCATGCATGATCATCAGCCGATCATGTGTGGAATTAATG
AATCTCTCTTATTGGCTAATTAGGTGTACTTTGTGTTCCGTTAAGGCGCAATCCGGTTCCGTTAAGCTTATCTGACTTTT
GGGGGATTTCTTG----TTAGTCCACGAGAGAATTTCGATTTGTTAGGGTGTCATGCTCACCTTGATGTGCATATGGCAT
CTCTTTCACTTGTGGAGCAATTTTAT---CTAGCTAGCTAGCCACTGAGAGAGTTAATTTTACCTTTCTTGCTTCCTAAT
TCATCTATCGCGCACAAGCTAGCTATCCATGGTGTCGTTG-AAGCACATCGTCTAAGCTTCTTAGATGATTAATTAAC--
------CCATGGAAAATGACCCGTTG------TGTGGTT------TCAGGGAAGAGCTGCAGGCTGAGGTGGTTCAACCA
GCTGGACCCGAGGATCAACCGGAGCCCCTTCTCGGAGGAGGAGGAGGAGCTGCTCCTCGCCTCGCACCGCGTCCACGGCA
ACCGGTGGGCCGTCATCGCCAGGCTCTTCCCGGGCCGCACCGACAACGCCGTCAAGAACCACTGGCATGTGATCATGGCC
CGCCGGTGCAGGGAGCGGATGAGGCTGTCGTCCAACAGACGTGCCACGCCTGCCGCT---GCCTCCACCACCACGGCCGG
TGCCGAGAAAGACGATAGCCCTAGGAACACCACCGGCGGCGAGAAGCCGAGACTTCCGGAGGCGAATACCATGGCCGCCT
TGCTCCACAAGTACCGCAGAGAATTTGCTGCCCCCTTCGCGATCAGCCGTCACAGTAGCAAGGAGGGTTACTGCTCATCC
ACGAATGAAGGTGAAATGATTGACCCATTGCATGCATGCATGGTACTGAAATTTAGCCA--------------------T
GTGTGTCCGGAACTAATCAATTAGGGTTAATTTGTTCTGCAGATACGAATAGATCGGTGGAGTTCTACGATTTTCTCCAG
GTGAACGTGAGCTCGAGCGACACCAAGTGCGGCTCGAGCATCGAGGAGCAAGAGGAGAACCGGGACGAAGGCGA---TCA
GCAAGCTGAAGGGCAGGTGTCGCTCATAGATTTCATGGAGGTTGGGACTTCTCATCAATGATTTATCTTATCTATATATG
TTATGGCCTTATGGGTCAGTATTTAACTAGGGGTGGTGCATCCAAAGCAGCTTGTAATGCTTTGTGAGGAGGCCGG----
GGCATGCGACAT--GTAGCAATCTAACACCAAATATACTTATAGAGGAAGCTAAGCCAAATGCAAACGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCGTCATTAGTTCTCTT
AGTAGTAACTACGTACTACTTGATTACCACATATAGCAATGCTTTTACGTGCAGGTTGGAGGGTCATAGGTTTAACTTGC
ATCAGGCGCGCGCTCGTTTGTCATGTACGCATTGTTCGACCGGAGCGTACAATAGGTAATTCTGCGCTCAGGCTTAGTTT
AGCAAGCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATTATTCTATTCCTTATAGGCAGACTACCCACAGTGGAAGTAACATATATA
GGTAGTAACAATACACATATCCGAAAATACACAGGAGCGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGCACACATGCATGTATATGCCCGTCCATGCAGAGTTCTTCGTGAG
ATATGGAGAACGGGGCTTTTCTCTCATCATTTGTAAATTTAATTAATAATAAACA-TTTTTTGTTCTCATTTAATATGTT
TAATTATTGGTTATTATGGGGTTTTTTTAGGGAGGGTTTTAATCAGTCATGGGATG-TTTTTCCGATGTTTTAATCAGTC
ATTTAATCTGTTTGATTATTGGTTATTATGGATTTTTAATCAGTCATGAGATATTTTTCCCCCTCAGACCTTCCACTATC
AAAGATAAC---------CCATGGTGTATTGTACCCGCCATTCCATCAGAGATTATTATTTTTTGATAAAGAGAGCACCC
TCTCTGGTTTTCATATATCAGAAACCACTTGTTTTTTTTTTGTACTACTAGGGACTAGAAACGACAAAAGGAAATAAAAC
GATAGACAATCCTGGCAGAACAGCACGAGCTAGACTCGTCTGTCTGCCAAGATTACAAAACAGTTAAGGCTATATCGGCA
TAACTGTCGATAACCTACAGACAGTTAAAACGACTCCAGCAACATAAACCCCTGGGGAGCACCACAAGCTAGGCTCTCCA
GGGAATGGCAGTCCATCAAAGATTGAACCTCATTTTTGTTGCTCTCTATGTCTCATCAGGG-TGGAGGTGACTTCCGCTA
AACTTGACACTCACGGAGCCTTTAGTACGCGTTACTAGAACGATGTGTGTGCTTATGTATGCTAGGGTCGTATTCAATGA
TTACGATTTTATCATATATGACTTGTTGATTCCGATTTTCCGGTATAGGCATTTATGACCCTCCCCTCTATGCCATGTGA
TAATGTTTTCTCTAAAATTACTACCTTTACCACAATGGTGTCGTCCGTAGATTGGATTTCACTTGCATGTAT-------
>SNPs
-------------------------------------------------SSSSSSS------------------------
---------------------------------------------------------------------------S----
-----------------------S-----------------------------------------------------S--
---S---------------------S-------SS-------------------S-------------------------
----------------------------------------------------------------------------S---
--------------------S-SSSSSS----------------------------------------------------
-----------------S--------------------------------------------------------------
-------------------------------------------------------------------SSSS---------
---------SSSS-------------------------------------------------------------------
-----------S--------------------------------------------------------------------
------S--------------------------------------------------------------------SS---
-------------------------------------S------------------------------------S-----
--------S-----------------------S--S----S--S----------------S-------------------
--------------------------------------------------------------------------------
--------------------------S------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
------S-----------------------------------------------------SS-SS--S------------
-------------------------SSSSSSS----S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---S----------------------S---------------------
------------------------------------------------------------------------------S-
-------------------S------------------------------------------S--S---S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------------------------------------------------------------------SSSS
--------------------------------------------------------S-----------------------
---S----S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------------------------------------------------------S------------------------
---------------S----S---------------------------SSSS-SSSS-----------------------
--------------------------------------------S--------------S--------------------
-----------------------------------S--------------------------------------------
-------------------------S--------------------------------------S--------------S
-----------S----------S------------------S----------------------------------S---
----S---------------------------------S-------------SS-----------------------S--
--------------------------------------------------------------------------------
-------------S-----------------SS-----------------------------------------------
---S----------S-----S----------S-------S--------------------S----S--------------
-----S---S-SS-----S-SS--S-S--------S----S-------------------------------SSSSSSS
>forward_653
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------CTGGGGT
TGGCCAGTTAGAG-------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------CGG
GGCATGCTACATCTGTA---------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_1872
--------------------------------------------------------------------------------
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------------CGATAGCCCTAGGAACACCG------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_3420
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------TCCCTCGGACCTTCCACTAT-
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
