>input_sequence_54069
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-------------------ATGGAGGACGCGGCGGAGGGCAAGACGAAC---GTGCTGCAGGGGAGGTACGAGCTGGGGC
GCGTGCTGGGGCACGGCAACTTCGGTCGGGTGCACGCGGCGCGGGACCTGCGCACGGGCCGCGGGGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
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--------------------------------------------------------------------GGCCAAGGACAA
GGTGGAGCGCGCCGGGATGGTGGAGCAGATCAAGCGGGAGATCGCGGTGATGAAGATGGTGTCCCACCCCAACATCGTGG
AGCTGCACGAGGTGCTGGCCACGCGCACCAAGATCTATCTGGCCCTCGAGCTCGTCCGCGGCGGCGAGCTCTTCGCCCGG
ATCTCCCGCGCCGGCCGCCTCCGCGAGGACGTCGCGCGCCGGTACTTCCGCCAGCTCATCTCCGCGGTCGACTTCTGCCA
CGGCCGCGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTGCTCCTCGACGAGGCCGGCAACCTCAAGGTCGCCGATT
TCGGGCTCAGCGCGCTCGCTGGCCACGCACGCCCCGACGGGCTGCTCCACACCGCGTGCGGCACGCCGGCGTACGTGGCC
CCCGAGGTGCTCGGCGGGAATGGCTACGACGGCGCCAAGGCCGACATCTGGTCCTGCGGTGTCATCCTCTACGTGCTCCT
CGTCGGCGCCCTGCCGTTCCAGGACGAGAACCTCATGTCCATGTACCGCAAGATGCAGCGCGGCGGCTTCCTCTGCCCGT
CGTGGGTCTCCAAGGACGCCCGGAAGTTGATCGGCAGGCTGCTCGACCCCAACCCGAGCAGCCGCATCACGATCGCCAGC
CTCGTCGAGTCGCCGTGGTTCAAGAAGACGTCGCCCATTCCGAGCCCTCTCTTGGAGCCCGTGCCACCAGCGGCCGCGCG
CGGCAACGGCGAGGACAAGGACGAGCCTCCGGAGGCGCTGAACGCCTTCCACCTGATCTCCCTCTCCGCGGGCTTCGACC
TGTCGCCGCTGTTCGACCAGGAACCGTCGACGGGGCGCGGGGCGAGGGGCGGCGTCATGCGGTTCGCGACGCGGGAGCCG
GCGAGCGGCGTGATCTCGCGGCTGGAGGGCCTGGCGAC------CGGCGGGGCCATGCGCGTGACCAAGAGCGGGGCGCG
CGGGGTGCGGCTGGAGGGCGCCGAGC---GCGGGCGCAAGGGGCGGCTCGGGGTGGCCGCGGAGTTCTTCAGCGTGGCGC
CGTCCGTGCTGGTGGTCGACGTCAAGAAGGACGGCGGCGACACGATGGAGTACCGGTCGTTCTGCAGCGACGAGCTCCGG
CCGGCGCTCAAGGACATCGTGTGGGCTGCC---GCTGCCGCCGCCGCCGCGTCCCCCGGTGACCCCCCTGCCCCCGCCTG
A-------------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G225200
TTTGAAATTCTCCGAACATTTTTTGAAAGTGTGAACAAAATTTAAAAGGAAAATATTTTTAATTTTT-TTAGGCATTTTC
AAAAATTCAAAGAAAAAGAAAACAGAAAACAGAAAAAACAAACAAATAAATATAGTACAAACAACCAGTAAATAAAAGAA
AAACCGGTTTATGGACCTCCT------------------------AAAATCAGCAGCTGGTTCATGCCCCAGAATGCTTG
TGCAACTAAATGGATCTGCCCAGTATTAGCGCTGTAGCGGGAGACAGGGA--------------------------TTGT
AGCG----------------------------------------------------------------------------
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---------------------------------------------------------GGCGATACATCGCAACCGCGGTT
AGTTGCTCCACGTATAGTTTTTTTTTTCTGGGACAGAAGATAAGAGTTCAATTCCAAACGACAAAAGAGAGCCACGAGCT
CGATCCGCTAGCAATGGATCACGACATGGCCCAGCAATAACTC---CGGCCCGCGCCCATGCCGGACCACCACATCCACC
ACCG----------CCTGACCAGTGGGCCCCGCGCA---------TGGCCCCCGTCGTCATCC-----------AATACC
GTCCACGAAAACCGTCGCCCGTTTCCCCTTCACCGCATACGGTTTCCGTCCGCGCCCATCACTCTCGCGTCCTGCTCCTT
CCCGATGCCGTTGGTTGCGTCACAGCCATCCAGGCACCTCCCGCCCCCCGCCGTCCGATCCCATCCAACGGCCCGATGCG
CCTCCCAGATCCGCAACCGCCGCGATATTTATCCCGCGGCGGCCTCCATCTCCTGCTCCACCG--AAAAGCCTTTTCGTG
TCTCGCACCGCCGGCAACCAACGCCGTCGACGAGAGGTTCTCGTGCACCACCATCCCATCTTCTCCTCGCCGCCTTTGGG
AATGCGGAGCAATGTGGAGGAGCGCGCGCACTGACCTCGCCGGCAAGCATAGCCTGCGCGGCGGCCGCAACTGCCACCGC
AAGCACGTCGAGGACGGGTAGATCGCGCGTCGGCACTCGCCGGCCGGTTCAGTGCGGGGCTCGGGGTCCGGGCCCGCGGG
GAGGAGGAGGGGGGCGGCAATGGAGGACGCGGCGGAGGGCAAGACGAAC---GTGCTGCAGGGGAGGTACGAGCTGGGGC
GCGTGCTGGGGCACGGCAACTTCGGTCGGGTGCACGCGGCGCGGGACCTGCGCACGGGCCGCGGGGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
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--------------------------------------------------------------------GGCCAAGGACAA
GGTGGAGCGCGCCGGGATGGTGGAGCAGATCAAGCGGGAGATCGCGGTGATGAAGATGGTGTCCCACCCCAACATCGTGG
AGCTGCACGAGGTGCTGGCCACGCGCACCAAGATCTATCTGGCCCTCGAGCTCGTCCGCGGCGGCGAGCTCTTCGCCCGG
ATCTCCCGCGCCGGCCGCCTCCGCGAGGACGTCGCGCGCCGGTACTTCCGCCAGCTCATCTCCGCGGTCGACTTCTGCCA
CGGCCGCGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTGCTCCTCGACGAGGCCGGCAACCTCAAGGTCGCCGATT
TCGGGCTCAGCGCGCTCGCTGGCCACGCACGCCCCGACGGGCTGCTCCACACCGCGTGCGGCACGCCGGCGTACGTGGCC
CCCGAGGTGCTCGGCGGGAATGGCTACGACGGCGCCAAGGCCGACATCTGGTCCTGCGGTGTCATCCTCTACGTGCTCCT
CGTCGGCGCCCTGCCGTTCCAGGACGAGAACCTCATGTCCATGTACCGCAAGATGCAGCGCGGCGGCTTCCTCTGCCCGT
CGTGGGTCTCCAAGGACGCCCGGAAGTTGATCGGCAGGCTGCTCGACCCCAACCCGAGCAGCCGCATCACGATCGCCAGC
CTCGTCGAGTCGCCGTGGTTCAAGAAGACGTCGCCCATTCCGAGCCCTCTCTTGGAGCCCGTGCCACCAGCGGCCGCGCG
CGGCAACGGCGAGGACAAGGACGAGCCTCCGGAGGCGCTGAACGCCTTCCACCTGATCTCCCTCTCCGCGGGCTTCGACC
TGTCGCCGCTGTTCGACCAGGAACCGTCGACGGGGCGCGGGGCGAGGGGCGGCGTCATGCGGTTCGCGACGCGGGAGCCG
GCGAGCGGCGTGATCTCGCGGCTGGAGGGCCTGGCGAC------CGGCGGGGCCATGCGCGTGACCAAGAGCGGGGCGCG
CGGGGTGCGGCTGGAGGGCGCCGAGC---GCGGGCGCAAGGGGCGGCTCGGGGTGGCCGCGGAGTTCTTCAGCGTGGCGC
CGTCCGTGCTGGTGGTCGACGTCAAGAAGGACGGCGGCGACACGATGGAGTACCGGTCGTTCTGCAGCGACGAGCTCCGG
CCGGCGCTCAAGGACATCGTGTGGGCTGCC---GCTGCCGCCGCCGCCGCGTCCCCCGGTGACCCCCCTGCCCCCGCCTG
ATGTCGCTGTCGTCCACGCCACCATTATTGCCCCTGTCTGTCACTGTTGCTATCCGGCCGTAATTAGGTGTGCATTATTG
TTCGGTGCCGAAGTTGATGGCTGCTGCCTGCTGGTA-TGCTTGTGCTTGTAGTTGTTGGCTGGTTTTTGCGCGCGGCAGC
AGGACAGAATCGGCGCCGAGTGATGGGATGTCTGCATCTGCCAATA---TTGTTTTGAACTATATTTGAATAAACAGTAT
CATGTTGTTTCGTAAATTAAGGCTCTGTTTGGAAGCAATGTCTTGTTCAAACCTCAGTATTTTGATAGTACTATGGTTGT
TTATTCCGATGACAATGAATACTATGGTTTATGAAACCAACAGTCTTTCTAAGTATTACAGAAATAGTGATATGTTTGGC
AATCAATAGTATACAGCGTTGCAATAGGCCACCACTAGACAAGGCCTTTGTTCTGTTTCTCAGTTTTAAAAAACGAGATC
CCAACCTCTTTTTTTTTAATACTGCAAAAATACTATAGTTTTGTGGATACTGTAGTTTATAATACTATAATTTTCATTGG
AGCCAAACAAAATACTTTGAGAATACATTGCAACCAAACACAGCCTAAATGACCCTTGCACTTGCATGCCTGCATGCCTT
CAAGTTTATTTTTTACAAGATAAAAGAGTTTTATTGCTTACTTAAGCAGGCATATAGTCACGATACAACGTGTTTATTAG
GAAAACAGGAGTGTAGTTAAGCCATAAACATCTCCTCCTAACACATGTCACCTGCTTCGCACATAAGTGAGCCGCCTCAT
TAGCTTCTCTACATACGGATTTCAGCTTCAAACTCTCAAATTGATCACGAAGCTCCCTGATCTCTTGAAGAATGCCGGCT
ATCTTCGAACTATCGAAGGTATCTGTCTCCCACAACTTAACAAGGGCTTGTGCATCAGTATCCACCTCAACTTTGCTGAA
ACCTTTCTCAGTAGCCATTCGAACCCCACCTCAAATTGCTTCTGC
>chr5D_1
TTTGAAATTTCCCAAACATTTTTTGAAAATGCAAACAAAATTCAAAAGGAGAATATTTTTTAAAAATATTAGGCATTTTT
AGAAATTCAAAGAAAAAGAAAACAGAAAA----------AAACAAATAAATAAAGTACAAAAAACCAGTAAGTAGAAAGA
AATACCGGACCTCGTTGAAGGTCAAAACCGCCCAAGAAGCTTCACAAAATCAGCAGCTGGTTCATGCCCCAGAATGCTAG
TGCAACTAAATGGATCTGGCCAGTA-TAGCGCTGTAGCGGGAGATCGTCTGGGCAATCTTAGCGATAGGGATTGCAGGGT
TCGGCTCAGCTGCAGGGCTCCCTGCAGGAAATATTGTGCAGGGCCAATAAGAGACCGCCACTTGTCCATGTGGGCCAACT
CCTCCGATTAAGGTAGATTTAATTTGATACGAGAAGAGGGCGGGGGCGGTACTGCGAGCATGGAGGACTCCGGCGCCGTG
CGGCGTTCTGGGGCGCATACGGAATGGCGTTTCCTCCTCGTGGCCGAGCATGACGCCAGGGCCCCAATGTCGTCCAGGCG
GTGCTCCTCCTCCATGGCTTCCCAGAGCTTTGTCTGTACTGGCGCCACAAGATGGCCGCGCTCGCCGCGCCCTCGTCCCC
GACCTCCGTGGCTTCGGCGACTCCGATGTCCTAGCCGATCCCACCGCCTACGTTGTCATGCTCCTCGACCACCTCCGCCT
CCCCTCTACCGGTGTGTGTCTGCATCAAGCGATACCAGGGGTGGCATGCCATCGCCCGTGTCTTCTGATTTAATTTTAGC
ATACCTTCTTCTTTTTGGCAGGAGCATACGTTCTTGTTTTATAGTTAAAGTGAACTGAGTTTCGTGACCGAGAGTTCAAA
CAATAAATCGAATCGAACGTGCCGAGCAAGGAGTTTCGATGGTTATTCGAGAGGGTTAGTTAGTTGAATGAGCCTTTCAA
CGTCGACGACATGGAGAATGATGTACCACTGCAGCAAGCCAGCATGGTTCTCACGTCAATGCGGGAGATGACTCCAACCG
ATGCACGCTAGGATGTTGATAGTGGCTGCATCAAACTCGGCATGAATGGCGGCAAACTGCACCACCACATCCCGCATATC
ACCATCGCTTGACGACATCCTCTGTGAAGGAGAGACCTGTGTGGACCTTCATCCCGGCTAGGACGTCTTACGCAACCACA
GCGTGCAGCCGTGCACAGCTAGCGGCAACGGCGCTACTTGTGTCACTACTACAGGTAGCTCTGACAGCCGCGAGCACAAT
GGCACCGACAATGGCTGCACTTGACTTCTCATGGGTGGCCGCACCTGCACCACCACATCTCACGCATCACCACCTCTCAA
CATCGTCCAAAGTAGGCGCCTAGTCAAAGGAGGGACCGGCGCCGAAGCCGCGGAGGTCGAAGACGAGGGCGCGACGAGTG
CGGCCATCTGGTGGCGCCAAAGCTCCGGGAAGCCGTGGAGGACAAGCACCGCCCGAACGGCGGCAGGGCCCTGCTCGGCC
ACGGGGAGGGACATGCCGTTCACGTCGGTGTTCTAGCGGGCCGCAAGTCGCCGGGCTCCTCTATGCTCGCAGCACCACCT
CCGCGCTCTTCTCGTATCAAATTAAATCTATCTTAATCGTAAGAGTTGGCCCACATGGACAAGTGCAGTCTCTTATTGGC
CCTGCACAATATTTCCTGCAGGGAGCCCTACAGCTGAGCCGAACCCGGGATTGCAGCGGCGATGCATAGCAATCGCGGTT
AGTTGCCCCGCGTATAGTTTTTTTTTTGAGAGAGAAGAT---AGAGTTTAATTTCAAACGACAAAAAAGAGCCACGAGGT
CGATCCGCTAACGATGGATCACGTCATGGCCCAGCAATAACTC---CGGCCCGCGCCCATGCCGGACCACCACATCCACC
ACGCCGACCACCGCCCTGACCAGTGGGCCCCGCGCA---------TGGCCCTCGTCGTCATCCCAACCCAACCCAATACC
GTCCACGAAAACCGTCGCCCGTTTCCCCTTCACCGCATACGGTTTCCGTCCGCGCCCATCACTCTCGCGTCCTGCTCCTT
CCCGATGCCGTTGGTTGCGTCACAGCCATCCAGGTACCTCCCGATCCCCGCCGTCCGATCCCATCCAACGGCCCGATGCG
CTTCCCAGATCCGCAAGCGCCGCGATATTTATCCCGCGGCGGCCTCCATCTCCTGCTCCACCG--AAAAGCCTTTTCGTG
TCTCACACCGCCGGTAACCAACGCCGTCGACGTGAGGTTTTCGTGCACCATCATCCCATCTTCTCCTCGCCGCCTTTGGG
AATGCGGAGCAATGTGGAGGAGCACGCGCACTGACCTCGCCGGCAAGCATAGCCTGCGCGGCGGCCGCAACTGCCACCGC
AAGCACGTCGAGGACGGGTAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAAGGACAA
GGTGGAGCGCGCCGGGATGGTGGAGCAGATCAAGCGGGAGATCGCGGTGATGAAGATGGTGTCCCACCCCAACATCGTGG
AGCTGCACGAGGTGCTTGCCACGCGCACCAAGATCTACCTGGCCCTCGAGCTCGTCCGCGGCGGCGAGCTCTTCGCCCGG
ATCTCCCGCGCCGGCCGCCTCCGGGAGGACGTCGCGCGGCGGTACTTCCGCCAGCTCATCTCCGCGGTCGACTTCTGCCA
CGGCCGGGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTGCTCCTCGACGAGGCCGGTAACCTCAAGGTCGCCGATT
TCGGGCTCAGCGCGCTCGCCGGCCACGCACGCCCCGACGGGCTGCTCCACACCGCGTGCGGCACGCCGGCGTACGTGGCC
CCCGAGGTGCTCGGCGGGAACGGCTACGACGGCGCCAAGGCTGACATCTGGTCCTGCGGTGTCATCCTCTACGTGCTCCT
CGTCGGCGCACTTCCATTCCAGGACGAGAACCTCATGTCCATGTACCGCAAGATGCAGCGCGGCGGCTTCCTCTGCCCGT
CGTGGGTCTCCAAGGACGCCCGGAAGTTGATCGGCAGGCTGCTCGACCCCAACCCGAGCAGCCGCATCACGATCGCCAGC
CTCGTCGAGTCGCCGTGGTTCAAGAAGACGTCGCCCATTCCGAGCCCCCTCCTGGAGGCCGTGCCATCAGCGGCCGCGCG
CGGCAACGGCGAGGACAAGGACGAGCCTCCGGAGGCGCTGAACGCCTTCCACCTGATCTCCCTCTCCGCGGGCTTCGACC
TGTCGCCGCTGTTCGACCAGGAACCGGCGACGGGGCGCGGGACGAGGGGCGGCGTCATGCGGTTCGCGACGCGGGAGCCG
GCGAGCGGCGTGATCTCGCGGCTGGAGGGCCTGGCGAC------CGGCGGGGCCATGCGCGTGACGAAGAGCGGGGCGCG
CGGGGTGCGGCTGGAGGGCGCCGAGC---GCGGGCGCAAGGGGCGGCTCGGGGTGGCGGCGGAGTTCTTCAGCGTGGCGC
CGTCAGTGCTGGTGGTCGACGTCAAGAAGGACGGCGGCGACACGATGGAGTACCGGTCGTTCTGCAGCGACGAGCTCCGG
CCGGCGCTCAAGGACATCGTGTGGGCTGCTGCC---GCCGCCGCCGCCGCGTCCCCCGGTGACCCCCCTGCCCCCACTTG
ATGTCGCTGTCGTCCACGCCACCATTATTGCCCCTGTCTGTCACTGTTGCTATCCGGACGTAATTAGGTGTGCATTATTG
TTCGGTGCCGAAGTTGATGGCTGCTGC----TGGTAATGGTTGTGCTTGTAGTTGTTGGCTGGTTTTTGCGCGCGGCAGC
AGGACAGAGTCGGCGCCAAGTGATGTGATGTCTGCGTCTGCCAATAGTATTGTTATGAACTCTTTGAAT---AACAGTAC
CATGTTGTTTCGTAAATTAAG-----------------------------------------------------------
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>chr5B_177
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-----------------TCCT------------------------AAAATCAGCAGCTGGTTCATGGCGCAGAATGCTAG
TGCAACTATATGGGTCTGCCCAGTA-TAGCGCTGTAGCGGGAGGTCGCGTGAGCGATCTTACCGATAGGGATTCCCTTGC
AGCG----------------------------------------------------------------------------
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---------------------------------------------------------GGCGATACATAGCAATCGCGATT
AGTTGCCCCGCGTATTC----TTTTTCGAGAGAG--GAT---AGAGTTCAATTTCAAACGACAAAAGAGAGCCACGAGCT
CGATCCGCTAGCAATGGATCATGGCATGGCCCACCAATAATAACTACGGCCCGCGCCCATGCCGGACCACCACATCCACC
ACGCCACCACCA--CCTGGCCAGTGGGCCCCGCGCGGCCGCCGCGTGGCCCTCGTCGTCATCCCAACCCAACGCAATACC
GTCCACGAAAACCGTCGCCCGTTTCCC-TTCACCGCATACGGTTTCCGCCCGCGCCCATCACTCTCGCGTCCTGCTCCTT
CCCGATGCCGTTAGTTGCGTCACAGCCATCCAGGTACCTCCCGCTCCCCGCCGTCCGATCCCATCCAACGGCTCGATGCG
CTCCCCAGATCCGCAAGCGCCGCGATATTTATCCCGCGGCGGCCTCCATCTCTTTGCTCCAACGAAAAAGCCTTTTCGTG
TCTCACACCGCCGGTAACCAACGCCGTCGACGAGAGGTTTTCGTCCACCATCATCTCATCTTCTCCTCGCTGCCTTTGGG
AATGCGGAGCAATGTGGAGGAGCACGCGCACTGACCTCGCCGGCAAGCATAGCCTGCGCGGCGGCCGCAATTGCCACCGC
AAGCACGTCGAGGACGGGTAGATCGTGCGTCGACACTCGCCGGCCGGTTCAGTGCGGGGCTCGAGGTTCGGTCGCGCGGG
GAGGAGGAGGGGGGCGGCAATGGAGGACGCGGCGGAGGGGAAGACCAAC---GTGCTGCAGGGGAGGTACGAGCTGGGGC
GGGTGCTGGGGCACGGCAACTTCGGCCGGGTGCACGCCGCGCGGGACCTGCACACGGGGCGCGGGGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
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--------------------------------------------------------------------GGCCAAGGACAA
GGTGGAGCGCGCCGGGATGGTGGAGCAGATCAAGCGGGAGATCGCGGTGATGAAGATGGTGTCCCACCCCAACATCGTGG
AGCTGCACGAGGTGCTGGCCACGCGCACCAAGATCTACCTGGCCCTCGAGCTCGTCCGCGGCGGCGAGCTCTTCGCCCGG
ATCTCCCGCGCCGGCCGCCTCCGCGAGGACGTCGCGCGGCGGTACTTCCGCCAGCTCATCTCCGCGGTCGACTTCTGCCA
CGGCCGGGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTGCTCCTCGACGAGGCCGGCAACCTCAAGGTCGCCGATT
TCGGGCTCAGCGCGCTCGCCGGCCACGCACGCCCCGACGGGTTGCTCCACACCGCGTGCGGCACGCCGGCGTACGTGGCC
CCCGAGGTGCTCGGCGGGAACGGCTACGACGGCGCCAAGGCCGACATCTGGTCCTGCGGTGTCATCCTCTATGTGCTCCT
CGTCGGCGCTCTGCCCTTCCAGGACGAGAACCTCATGTCCATGTACCGCAAGATGCAGCGCGGCGGCTTCCTCTGCCCGT
CGTGGGTCTCCAAGGACGCCCGGAAGTTGATCGGCAGGCTGCTCGACCCCAACCCGAGCAGCCGCATCACGGTCGCCAGC
CTTGTCGAGTCGCCGTGGTTCAAGAAGACGTCGCCCATTCCGAGCCCTCTCTTGGAGCCCGTGCCATCAGCGGCCGCGCG
CGGCAACGGCGAGGACAAGGACGAGCCCCCCGAGGCGCTGAACGCCTTTCACCTGATCTCCCTCTCCGCGGGCTTCGACC
TGTCGCCGCTGTTCGACCAGGAACCTTCGACGGGGCGCGGGACGAGGGGCGGCGTCATGCGGTTCGCGACGCGGGAGCCG
GCGAGCGGCGTGATCTCGCGGCTGGAGGGCCTGGCGAC------CGGCGGGGCCATGCGCGTGACGAAGAGCGGCGCGCG
CGGGGTGCGGCTGGAGGGCGCCGAGC---GCGGGCGCAAGGGACGGCTCGGGGTGGCGGCGGAGTTCTTCAGCGTGGCGC
CGTCAGTGCTGGTGGTCGACGTCAAGAAGGACGGCGGCGACACGATGGAGTACCGGTCGTTCTGCAGCGACGAGCTCCGG
CCGGCGCTCAAGGACATCGTGTGGGCTGCTGCTGCTGCTGCCGCCGCCGCGTCCCCCGGTGACCCCCCTGCCACCACTTG
ATGTCGCTGTCGTCCACACCACCATTATTGCCCCTGTCTGTCACTGTTGCTATCCGGCCGTAATTAGGTGTGCATTATTG
TTCGGTGCCGAAGTTGATGGCTGCTGC----TGGTA-TGGTTGTGCTTGTAGTTGTTGGCTGGTTTTTGCGCGCGGCAGC
AAGACAGAATCGGCGCCAAGTGATGTGATGTCTGCGTCTGCCAATA---TTGTTATGAATTCTTTGAAT---AACAGTAC
TATGTTGTTTCGTAAATT--------------------------------------------------------------
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>chr4A_996
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--------------CGGGAATGGCGGGTTCGGCGGAGGGGAAGAAGGGCGGGGTGCTGCAGGGGCGCTACGAGATGGGCC
GCGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACATCGCGCGGGACCTGAGGACCGGGCGGGCCGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGCCAAGGACAA
GGTGGTGCGCGCCGGCATGGTGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGGGTCTCCCACCCCAACATCGTCG
AGCTCCACGAGGTCATGGCCACGCGCTCCAAGATCTACCTCGCCCTCGAGCTCGTCCGCGGCGGGGAGCTCTTCTCGCGG
ATCGAGCGCTCCGGCCGCGTCACGGAGGACGTCGCGCGCCGCTACTTCCGCCAGCTCATCTCCGCCGTCGACTTCTGCCA
TGCCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTGCTCCTCGACGAGGCGGGGAACCTCAAGGTCGTCGATT
TCGGCCTCAGCGCGCTCGCCGACCACGCCCGCGCCGACGGGCTTCTCCACACCCTCTGCGGCACGCCGGGCTATGCTGCG
CCGGAGGTGCTCCGTGACAAGGGCTACGACGGCGCAAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCT
CGCCGGATCCCTCCCGTTCCCGGACGACAACGTTGTTACCATGTACAAGAAGGCGCAGCGCGGTGACTACCGATGCCCGC
CGTGGTTCTCGACGGATGCGCGCAGGCTCATTCCCAAACTGCTCGACCCCGACCCCGACACCCGCATCACCGTCGCGCAG
CTCGTGGAGACGCCGTGGTTCAAGAAGGCGTCCATCGCCAAGCCCCTAAGTCTTGAGCCGCCAGCATGCGTGAAGGATGC
CGGC---------GACAAGGACGAA---CCCGAGGCGCTGAACGCGTTCCATCTGATATCCCTCTCCGAGGGATTCGACC
TCTCGCCACTGTTCGAGGGCCACCCGGCAAGCCGGCGGC------TGGAGGGCGGCATGCGGTTCGCGACGCGGGAGCCA
GCACGGGGCGTGGTCTCCCGTCTCGAGGAGGTCGCTGCGCGTGGAGGCGGGCGGATGCGGGTGACCAAGAGCAGCCCGGG
GGGCGTGCGCCTGGAGGGCGCGGAACGCGGCGGGCGCAAGGGCCGGCTCGCCGTGGCCGCCGAGATATTCAGCGTGGCTC
CTTCGGTGCTCGTGGTCGACGTCAAGAAGGACGGCGGCGACACCCTCGAGTACCTCTCGTTCTGCTGTGACGAGCTCCGG
CCAGCCCTCCAGGACATTGTCTGGGCTGCC---G----------------------------------------------
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>chr4D_1011
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-----------------------------CGGCGGAGGGGAAGAAGGGCGGGGTGTTGCAGGGGCGGTACGAGATGGGCC
GTGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACATCGCGCGGGACCTGAGGACCGGGCGGGCCGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGCCAAGGACAA
GGTGGTGCGCGCCGGCATGGTGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGGGTCTCCCACCCCAACATCGTCG
AGCTCCACGAGGTCATGGCCACGCGCTCCAAGATCTACCTCGCCCTCGAGCTCGTCCGCGGCGGGGAGCTCTTCGCGCGG
ATCGAGCGCTCCGGCCGCGTCACGGAGGACATCGCGCGCCGCTACTTCCGCCAGCTCATCTCCGCCGTCGACTTCTGCCA
CGCCCGCGGCGTCTACCACCGCGACCTCAAGCCCGAGAACCTGCTCCTCGACGAGGCGGGGAACCTCAAGGTCGTCGATT
TCGGCCTCAGCGCGCTCGCCGACCACGCCCGCGCCGACGGGCTTCTCCACACCCTCTGCGGCACGCCGGGCTACGCCGCG
CCGGAGGTGCTCCGCGACAAGGGCTACGACGGCGCCAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCT
CGCCGGATCCCTCCCGTTCCCGGACGACAACGTTGTTACCATGTACAAGAAGGCGCAGCGCGGTGACTACCGATGCCCGC
CGTGGTTCTCGACGGATGCGCGCAGGCTCATTCCCAAACTGCTCGACCCCGACCCCGCCACCCGCATCACCGTCGCGCAG
CTCGTGGAGACGTCGTGGTTCAAGAAGACGTCCATCGCCAAGCCTCTGAGTCTTGAGCCGCCAGCATGCGTGAAGGATGC
CGCC---------GACAAGGACGAA---CCCGAGGCGCTGAACGCGTTCCATCTGATATCCCTTTCCGAGGGATTCGACC
TCTCGCCACTGTTCGAGGGCCACCCGGCAAGTCGGCGGC------GGGAGGGCGGCATGCGGTTCGCGACGCGGGAGCCA
GCACGGGGCGTGGTCTCCCGTCTCGAGGAGGTCGCTGCGCGTGGCGGCGGGCGGATGCGGGTGACCAAGAGCAGCCCGGG
GGGCGTGCGCCTCGAGGGCGCGGAACGCGGCGGTCGCAAGGGCCGGCTCGCCGTGGCCGCCGAGATATTCAGCGTGGCTC
CTTCGGTGCTCGTCGTCGACGTCAAGAAGGACGGCGGCGACACCCTCGAGTACCTCTCGTTCTGCTGCGACGAGCTCCGG
CCAGCCCTCCAGGACATTGTCTGGGCCGCC---G----------------------------------------------
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>chr4B_1011
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-----------------------------CGGCGGAGGGGAAGAAGGGCGGGGTGCTGCAGGGGCGGTACGAGATGGGCC
GTGTGCTCGGCCACGGCAACTTCGGGCGGGTGCACATCGCGCGGGATCTGAGGACCGGGCGGGCCGTGGCGGTCAAGGTG
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TGCCAAGGACAA
GGTGGTGCGCGCCGGCATGGTGGAGCAGATCAAGCGGGAGATCGCCGTCATGAAGCGGGTCTCCCACCCCAACATCGTCG
AGCTCCACGAGGTCATGGCCACGCGCTCCAAGATCTACCTCGCCCTCGAACTCGTCCGCGGCGGGGAGCTCTTCGCGCGG
ATCGAGCGCTCCGGCCGCGTCACGGAGGACGTCGCGCGCCGCTACTTCCGCCAGCTCATCTCCGCCGTCGACTTCTGCCA
CGCCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTGCTCCTCGACGAGGCGGGGAACCTCAAGGTCGTCGATT
TCGGCCTCAGCGCGCTCGCCGATCACGCCCGCGCCGACGGGCTTCTCCACACCCTCTGCGGCACGCCGGGCTACGCCGCG
CCGGAGGTGCTCCGCGACAAGGGCTACGACGGCGCCAAGGCCGACCTCTGGTCCTGCGGCGTCATCCTCTACGTGCTCCT
CGCCGGATGCCTCCCGTTCCCGGACGACAATGTTGTTACCATGTACAAGAAGGCGCAGCGCGGTGACTACCGATGCCCGC
CGTGGTTCTCAACTGATGCGCGTAGGCTCATTCCCAAACTGCTCGACCCCGACCCCGCCACCCGCATCACCGTCGCGCAG
CTCGTGGAGACTCCGTGGTTCAAGAAGACGTCCATCGCCAAGCCTCTGAGTCTTGAGCCGCCAGCATGCGTGAAGGATGC
TGCC---------GACAAGGACGAA---CCCGAGGCGCTGAACGCGTTCCATCTGATATCCCTCTCCGAGGGATTCGACC
TCTCGCCACTGTTCGAGGGCCATCCGGCAAGTCGGCGGC------GGGAGGGCGGCATGCGGTTTGCCACGCGGGAGCCA
GCACGGGGCGTGGTCTCCCGTCTCGAGGAGGTCGCGGCGCGTGGCGGCGGACGGATGCGGGTGACCAAGAGCAGCCCGGG
GGGCGTTCGCCTCGAGGGCGCGGAACGCGGCGGGCGCAAGGGCCGGCTGGCCGTCGCCGCCGAGATATTCAGCGTGGCTC
CTTCGGTGCTCGTGGTCGACGTCAAGAAGGACGGCGGCGACACCCTCGAGTACCTCTCGTTCTGCTGCGACGAGCTCCGG
CCGGCCCTCCAGGATATTGTCTGGGCCGCC---G----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>SNPs
---------SS--S--------------S--SS---------S-------S---------S-SSSS-------------S
-S---------------------------SSSSSSSSSS-------------S--------S---------S--S--SS-
--SS-S-SSSS-S-SSS-------------------------------------------------------------S-
-------------------------S------------------SS-S-S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S----S-------
------S--S-----------------SS-S--S-SS-SSSS-----------S--------------------------
-----------------------S--------------------------------------------------------
--SS-----------------------------------------------S----------------------------
--------------------------------------------------------------------------------
----------------------------------S---------S-----------------------------------
-S--------------S---------------------------------------------------------------
----S---------S------------------------S----------S-----------------------------
-----------------------S--------------------------------------------------------
-------------------------S------S------------------------------S---S---S-S------
---------------------------------------S----------------------------------------
-------------------------S-----------S--------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
---------------------------------------------------------------------------S-S--
--------------------------------------------------------------------------------
---------------------------SSSS--------S----------------------------------------
-----------------S-------S---------S------------------S------S-S-SSSSSSS-------S
---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1864
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CCGCTAGCAATGGATCACGA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_4078
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CTG
ATGTCGCTGTCGTCCAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_2998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------CCACGCGCACCAAGATCTAT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_4492
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TACAGCGTTGCAATAGGCCA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
