>input_sequence_54063
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--------------------------------------------------------ATGGCTGAAGAGGATGTCCAGCCC
ATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTACCCTGTCATGGTGTCAATCCCAAATTCAGTTACTAGCAT
GTTGTAGTGCAGAG--TACATTTCAGCG----CACGAACTGATCATCCATCCATCCTTCCGTTGCAAACCACAGGCGGGG
TTCGCCGGCGACGATGCGCCGAGGGCCGTGTTCCCCAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCAT
GGGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCCATCGAGCACG
GCGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCCGAGGAG
CACCCGGTGCTGCTCACCGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTT
CAACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACAACCGGCATCGTCATGG
ACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTTCACGCTCCCCCACGCCATCATCCGGCTGGACCTC
GCCGGGCGCGACCTCACCGACGGCCTCATGAAGATCATGACGGAGAGGGGCTACTCCTTCACCACCACCGCCGAGCGGGA
AATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGACTACGAGCAGGAGCTGGAGACCGCCAGGACCAGCT
CCTCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCACCATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTG
CTCTTCCAGCCGTCCATGATCGGCATGGAGGCCGCCGGCATCCACGAGGCCACGTACAACTCCATCATGAAGTGCGATGT
CGATATCAGGAAGGATCTGTACGGCAATGTCGTGCTCAGTGGGGGTTCCACCATGTTCCCTGGGATCGCCGACCGTATGA
ACAAGGAGATCACCGCACTCGCGCCCAGCAGCATGAGGGTGAAGGTGGTCGCCCCGCCGGAGAGGAAGTACAGTGTGTGG
ATCGGCGGCTCCATTCTTGCCTCTCTCAGTACCTTCCAGCAGGTAGCCATTTTTTTCTTACATACTTGCTCACTAA----
TGCTCTGTTATTGCTCGTTTCACTCTCCGA---GATTAATGGCGTGCCTTCATTTGTGTTACAGATGTGGATCTCCAAGG
CGGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTTCTGA------------------------------
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>chr3B_1_TraesCS3B01G410000
CATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCCGGTCGTCGTTCCCC
TTCAATGCTGGTGCCGTGCCGTGCCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCGCGGCCAAGAACGCAGCGGAC
ACCCGAGCTACCGA---------GAGCCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCAGAGCATATAAAACTGCTCCCCT
CT-ACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCCGCTCGCGTCACTCCGAGCTCCC
ACGAACCACCCCCCAATCCGTCAACGCGCCCGCCCGAGGTATGCTTTCC--TCTTCCTCCTCCTTTCTGAATCGATTTGA
TCCGTAGAGCAACGGGTTCTGCTAGGTTGTTTCGGTAGATCGCCAAGCGAGGTGTCGGCTCGTGGTTTTTCCGGTGGATT
CTGCGCTGGCAGGGTGGTTC---GGGTGGTTGGTAC--GGTGCGGTGCGATCCTTAGCGAGTTCGTGCTACCGTCGATGG
TGTTCGATCATCGGATTTTGGTATGGTGCCGTTGATTCCGTAGGATCTTAT-----------------------------
-------------------------CT-----CGTGACCGCTGACCACGGGCTGCGGTATCTTCTCTGTTGACCGCTTCG
GGTTCGGGGTGACTAGTGAATCGTGAACTGGTAGAATCTTCCTAAT---AACACGTGATTTGCGAAAGATTGGATCAATC
TCGTGAGATA--TGTATGGTACTTTTACCGTGATATATACGTAGTAGCTAATCAAGAATCAAATCCCGCGCTAATCATTC
CATACAATACCTGCAGAAATCTTGCGTGATGACCGGCAAAATATCCGTTTGTTATCACGCGTTTGTCTTGTATATCCATC
TGTACATATGTGAGCGAA---TATTGTTGTGATGCTCAAGACCATGCCC--------TGATCTTTTATTA----TCGAAA
TTTGAAGAAGCAGACTGAAAACTAAAATTCTTCTGTCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCCC
ATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTACCCTGTCATGGTGTCAATCCCAAATTCAGTTACTAGCAT
GTTGTAGTGCAGAG--TACATTTCAGCG----CACGAACTGATCATCCATCCATCCTTCCGTTGCAAACCACAGGCGGGG
TTCGCCGGCGACGATGCGCCGAGGGCCGTGTTCCCCAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCAT
GGGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCCATCGAGCACG
GCGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCCGAGGAG
CACCCGGTGCTGCTCACCGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTT
CAACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACAACCGGCATCGTCATGG
ACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTTCACGCTCCCCCACGCCATCATCCGGCTGGACCTC
GCCGGGCGCGACCTCACCGACGGCCTCATGAAGATCATGACGGAGAGGGGCTACTCCTTCACCACCACCGCCGAGCGGGA
AATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGACTACGAGCAGGAGCTGGAGACCGCCAGGACCAGCT
CCTCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCACCATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTG
CTCTTCCAGCCGTCCATGATCGGCATGGAGGCCGCCGGCATCCACGAGGCCACGTACAACTCCATCATGAAGTGCGATGT
CGATATCAGGAAGGATCTGTACGGCAATGTCGTGCTCAGTGGGGGTTCCACCATGTTCCCTGGGATCGCCGACCGTATGA
ACAAGGAGATCACCGCACTCGCGCCCAGCAGCATGAGGGTGAAGGTGGTCGCCCCGCCGGAGAGGAAGTACAGTGTGTGG
ATCGGCGGCTCCATTCTTGCCTCTCTCAGTACCTTCCAGCAGGTAGCCATTTTTTTCTTACATACTTGCTCACTAA----
TGCTCTGTTATTGCTCGTTTCACTCTCCGA---GATTAATGGCGTGCCTTCATTTGTGTTACAGATGTGGATCTCCAAGG
CGGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTTCTGATCAGTCCGTGGCTGACCAACCTGTACCTGT
CATTCAGTTGCTTGAGGTCCAAACCGCAGATGCCTGAATGTGTCATGGTTTCCACGGCGTCGTGGTTCACTGAA------
----TCATGGAACAAGTTTGAAAGGTAAGGTCGATTGATGGTTTCGAACAATTCCGTAGGGCGTCGGGTCAGTTTCAGTG
GGTTCACTGAAGGTGGGT---TGGGACATTTATTTTGGTTTCGGCGATTCAGCACATGCGTGTGCTGGAGACCTGAAACA
GAGTGTCGTTTGTTTGCACCACCCCGGCGAGGGTGTTGATTCTTGTACCTTTTGTAGCGGGGGTTTCTTGTCGAACTACC
TGGTCTGTTCTTGTTTGTAGAAGGAAGC-----TTATTGGTACTTAAGCATTTGTACATTTTAA---ATTATTGAAGGAA
GTTTATGTTTGTTATGTGTTGTTGTGGTAAAAAAAGATCATAAAACGTGGAGTGGATACTCGTTGTTGATCCGGTTGGTG
TGTTACGATTCTAGCAAGCGTCACAATCCCGTGTGAGGGAAGTTTGCAACGGGTCGATGTATACTCTCGAAAGCTAGACA
ACAATGTGTTTGTGTGGGTATGGCCTTGGATACATATTGTCAAACCCTGAATCGTGTCGGCGGCTGATCCGTCGATACGA
CATCCTTGGTGATCCTTCCCATTCGAGTCGGGC-ATCAGAGATGAAATTG--------------TTCAGATGGAAGTTTG
AGACTCGAAGAAAATCTTCTTCCCTGTCCATTTTCAACTGGAAGTCCAATGCTCAAAGAAAACCTTCACCCTAGTCTGTT
TTTCTAATAATCACCTCAAAAAAGCCTAGTCCACGCCTTTTAGTGGTATCATTTTGCTCAAACGAGAGATGACTTAGAAG
TGATCCATGGTGTGCCTTTTATAGGCTCTTGGTCATGTACAAATGACCACCAATACTCTTGTGGGAGAGAAAAGTAAGGT
CAAGACCCTCAAAAAGGAGAAAGAAAGCCATGTCTAATGTACTTGG
>chr3A_1
CATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCGGGTCGTCGTTCCGC
TTGAATGCCTGC----------GCCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCCCGGCCAAGAACGCAGCGGAC
ACCCGAGCTACCGA---------GAGCCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCAGGGCATATAAAACTGCTCCCCA
TCCACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCCGCTCGCGTCACTCCGAGC----
--------CCCCCCAATCCGTCAACGAGCCCGCCCGAGCAAAGGTATGATTTCCTCCCCCTCCTCCCTGAACCGATTTGG
TCCGTAGTTCCGATGGATCGTTCTCA---------TAGATCGCCGCGCGAGGTGTCGGCTCGTAGTTTTTCCGGTGGTTT
TCTCGCTGGCATGGGGGTTT---GG-TGGTTGATAGTTGGTACGACGCGATCCATGG--TGGT--------CGTCCATGG
TGTTTGATCATCGGATTG---------------------GTAGGATCTTTAGCTGGTAGCTTGCGCGACAGCCGTTGCTG
GTCAAGTCGATGATACACGAGTTCCCTTCCCTGGTGACCGCTGACCACGGGCTGCAGTATCTTTTCTGTTGACCGCTTCG
TGTTCGGGATGACCAGTGAATCGTGAACTAGTACTATCTTTCCTAATTAAACACGTGATTTGCGAAAGATTGGATCAATT
TCTTGATATATGTATGTTGTACGTTTACCGTGATT--------GTAGCTGATTAAGAGTCAAATCCCCCGCTAATCATAC
CATGTAATACCTCGAGAAATCCTGCGTGATGGCCGGCAAACTATCCGTTTGTTATCACGCGTTTGTCTTGGAT--CCATC
TGTATATATGTGAGCAAAAAATATTGTTGTGATGCTCAATACCATGCCC--------TGATCTTTTATTATCGAAA----
-TTGAAGAAACAGACTGAAAAATAGAATTCTTCTGTCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCCG
ATTGTGTGTGACAATGGCACCGGAATGGTCAAGGTCAGTTCCCCTCTCATGGTGTCAATCCCAAATTCAGTTA---GCAT
GTTGTAGTGCAGAG--TACATTTTAGCGTTCGCGCTAACTGAACAACCGTCC-----TTCGTGTCAAACTGCAGGCGGGG
TTCGCCGGCGACGACGCGCCGAGGGCCGTGTTCCCGAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGCAT
GGGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCGATCGAGCACG
GCGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAG
CACCCCGTGCTGCTCACGGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTT
CAGCTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACCACCGGCATCGTCATGG
ACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTTCACGCTCCCCCACGCCATCATCCGGCTCGACCTC
GCCGGCCGCGACCTCACCGACGGCCTCATGAAGATCATGACCGAGAGGGGCTACTCCTTCACCACCACCGCCGAGCGGGA
AATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGACTACGAGCAGGAGCTGGAGACGGCCAGGACCAGCT
CCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCACCATCGGCGCGGAGCGGTTCAGGTGCCCCGAGGTG
CTCTTCCAGCCCTCCATGATCGGCATGGAGGCCGCCGGCATCCACGAGGCCACGTACAACTCCATCATGAAGTGCGACGT
GGATATAAGGAAGGATCTGTACGGCAATGTCGTGCTCAGCGGGGGTTCCACCATGTTCCCTGGGATCGCCGACCGCATGA
ACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGAAGGTCGTCGCCCCGCCGGAGAGGAAGTACAGTGTCTGG
ATCGGCGGCTCCATTCTCGCCTCTCTCAGTACCTTCCAGCAGGTACCCATTTTCCCCCTACATGCT-----ACTAATGCT
TGCTCTGTTACTGCTCGTTTCACCCTGCGA---GATTAATGGCGTGCCTCCATTTGTGTCGCAGATGTGGATCTCCAAGG
CAGAGTACGATGAAACCGGCCCGTCGATCGTCCACATGAAGTGCTTCTGATCAGTCCGAGGCTGACCAACCTGTACCTGT
CATTCAGTTGCTTGAGGTCCAAATCGCAGATGCTTGAATGTGCCATGGTTTCCATGGCGTCGTGGTTCGCTGAAAGTGTT
TTGGTCATGGAACAAATTTGAAAGGTAAGGTCGATTGATGGTTTCGAACAATTCTGTAGGACGTCGGGTCAGTTTCAGTG
GGTTCACTGAAGCATGTAGTCTGGGACATTTATTTTGGTTTCGGCGATTCAGCTCATGCGTGTGCTGGAGACCTGAAACA
GAGTGTCGTTTGTTTGCACCACCCCGGCGAGGGTGTTGATTCTTGTACCTTTTGTAGCGGGGGTTTCTTGTCAAACCACC
TGGTCAGTTCTCGCATGTAGA----AGCTTATTTTGTTGGTACTTCAGCATTTGTACATTTTGAATTATTATTGAAGGAA
GTTTATGTTTGTTATGTGTTGTTGTGG-----------------------------TACTCGTTGTTGATCCGGTTGGTG
TGTTATGACTCTAGCAAGCGTCACAATCCCGTGCGATGGAAGTTTGCAACAGGTTCATGTATACTCTCGAAAGCTAAACA
ACAATGTATTTGTGTGCGTATGGCCTTGGATACATATCGTCAACCTCA-AATCGTGTCGGTGGCTGATCTGTCCATACCA
CATCCTTGGTGATTGTCG--ATTCGAGTCGGGCGATCAGAGATGAAATTGCTCAAAACCCACCATTCAAATGGAAGTTTG
AGACTC-AAGAAAATCTTCTTCCGTGTCCGTTTTCAACTGGAAATCCAATGCTCAAAGAAAACCTTCACCCGAGTCTGTT
TTCCTAATAATCACCTCAAATAAGCCTACAACACGCCTTTTAGTGGTATCACTTTGCTCAA-CGAGAGATGACTTACAAG
TGATCTATGGTGTGCCTTTTATAGGCTCTTGGTAGTGTAGAAATGACCACCAATACTCTCGTGGGAGAGAAAAGTAAGGT
CAATACCCTCAAAAAGGAGAAAGGAAAACATGTCTGATGTACTTGG
>chr3D_1
CATCGGACGCACACTGCGTTTCCCCACTGACCCGGACCAGGTCGGCCAGGAGCACGATGTTGTCCCGGTCGCCGTTCCGC
TTCAATGC---------------CCGTGCCGTGCCGTGACATGGATGGTGGCGTCAAGCGCGGCCAAGAACGCAGCGGAC
ACGCGAGCTACCCTACCGAGAGCGAGGCAGTCCAAGCGGAGCAGGCGGGCGGCCCGCACAGCATATAAAACTGCTCCCCA
TCCACCTTTCGTGTTGCTTCGTCTCCTCTCCCATTTGCCCCCGCCTCGCTCTCACGCTGCTCGCGTCACTCCGAGCTCCC
CGGTT-------------CGTCAACGAGCCCGCCCGAGGTATGCTTTCC--TCTTCCTCCTGCTTTCTGAATCGATTTGG
CCCGTCGCTCCGATGGATCGTTCTGA---------TAGATCGCCGCGCGAGGTGTCGGCTCGTAGTTTTTCCGGTGGTTT
TCGCGCTGGCATGGGGGTTGTTGGG-TGGTTGGTAGTTGGTACGACGCGATCCTTGGCATGGT--------CTTCCATGG
TGCTTGATCATCCGATTG---------------------GTAGGATCTTTAGCTGCTAGCTTGCGCAACATCCGTTGCTG
GTCAGGTCGATGATACACGAGTTCCCT-----GGTGACCGCTGGCCACGGGCTGCAGTATCTTCTCTGTTGACCGCTTCG
GGCTCGGGGTGACCAGTGAATCGTGAACTGGTAGAATCTTTCCAAATTAAACACGTGATTTGCGAAAGACTGGATCAATC
TCTTGATATATGTGTGTGGTACTTTTACCGTGATT--------GTAGCTGATTAAGAGTCAAATCCCCCGCTAATCATAC
CATGTAATACCTCGAGAAATCCTGCGTGATGACCGGCAAATTATCCGTTTGTTATCACGCGTTTGTCTTGTAT--CCATC
TGTATATATGTGAGCAAA---TATTCTTGTGATGCTCAACCATGCCCCAAGCGCCGTTGATCTTTTATTACCGATCGAAA
TTTGAAGAAACAGACTGAAAAATAAGATTCTTCTATCGCAGAAAACCGCTTGAGAAATGGCTGAAGAGGATGTCCAGCCC
ATTGTGTGCGACAATGGCACCGGAATGGTCAAGGTCAGTTACCCTGTCATGGTGTCAATCCCAAATTCAGTTA---GCAT
GTTGTTTGCCTGTTGTTACATTTCA------GCGCGAACTGATCATCCATCCATCCATTCGTGCCAAACTGCAGGCGGGG
TTCGCCGGCGACGACGCGCCGAGGGCCGTGTTCCCCAGCATCGTGGGCAGGCCGCGGCACACGGGGGTGATGGTGGGGAT
GGGCCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCCAAGCGAGGCATCCTGACGCTCAAGTACCCGATCGAGCACG
GCGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAG
CACCCGGTGCTGCTCACGGAGGCGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACTCAGATCATGTTCGAGACCTT
CAACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTCTCCCTCTACGCCAGCGGCCGGACCACCGGCATCGTCATGG
ACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGGGCTTCACGCTCCCGCACGCCATCATCCGGCTCGACCTC
GCCGGCCGCGACCTCACCGACGGCCTCATGAAGATCATGACGGAGAGGGGCTACTCCTTCACCACCACCGCCGAGCGGGA
AATCGTCAGGGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGACTACGAGCAGGAGCTGGAGACGGCCAGGACCAGCT
CCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGATCACCATCGGGGCGGAGCGGTTCAGGTGCCCCGAGGTG
CTCTTCCAGCCGTCCATGATCGGCATGGAGGCCGCCGGCATCCACGAGGCCACGTACAACTCCATCATGAAGTGCGATGT
CGATATCAGGAAGGATCTGTACGGCAATGTTGTGCTCAGTGGGGGTTCCACCATGTTCCCTGGGATCGCCGACCGCATGA
ACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGAAGGTCGTCGCCCCGCCGGAGAGGAAGTACAGTGTCTGG
ATCGGCGGCTCCATTCTTGCCTCTCTCAGTACCTTCCAGCAGGTACC-ATTTTTTCCCTACATACT-----ACTGA----
TGCTCTGTTACTGCTCGTTTCACCCTGCGAAGAGACTAATGGCGTGCCCGTGTTTGTGTCGCAGATGTGGATCTCCAAGG
CGGAGTACGATGAAGCTGGCCCGTCGATCGTCCACATGAAGTGCTTCTGATCAGTCCGTGGCTTGCCAACCTGTACCTGT
CATTCAGTTGCTTGAGGTCCAAATCGCATATGCTTGAATGTGTCATGGTTTCCACGGCGTTGTGGTTCACTGAAAGTGTT
TTGGTCATGGAACAAATTTGAAAGGTAAGGTCGATTGATGGTTTCGAACAATTCTGTAGGACGTCAGGTCAGTTTCAGTG
GGTTCACTGAAGCATGTAGTCTGGGACATTTATTTTGGTTTCGGCAATTCAGCTCATGCGTGTGCTGGAGACCTGAAACA
GAGTGTCGTTTGTTTGCACCACCCCGGCGTGGGTGTTGATTCTTGTACCTTTTGTAGCGGTGGTTTCTTGTCGAACTACC
TGGTCTTTTCTCGTATGTAGAAGGAAGCTTATTTTGTTGGTACTTCAGCATTTGTACATTTTGAA---TTATTGAGGGAA
GTTTGCGTTTGTTATCAGTTGT----------------------------------------------------------
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>chr5D_1596
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-----------------AGCCATACTGTGCCTATCTACGAGGGATATGCACTTCCTCATGCTATTCTCCGGCTGGATCTT
GCGGGCCGTGATCTGACCGACTCCCTGATGAAGATCCTCACAGAAAGGGGTTATTCCTTCACTACAACCGCTGAGCGGGA
AATCGTAAGAGATATAAAGGAGAAGCTCGCCTATGTCGCCCTTGACTACGAGCAGGAGCTGGAGACCGCCAAGAGCAGCT
CATCCGTCGAGAAGAGCTACGAACTGCCTGACGGGCAGGTCATCACGATCGGCGCCGAGAGGTTCAGGTGCCCGGAGGTG
CTGTTCCAGCCCTCGCTGATCGGCATGGAGGCTCCTGGGATCCACGAGACCACCTACAACTCCATCATGAAGTGCGACGT
GGATATCAGGAAGGACCTGTACGGCAACATTGTGCTCAGTGGAGGGACGACCATGTTCCCCGGCATTGCAGACAGGATGA
GCAAGGAGATCACCGCCCTCGCGCCGAGCAGCATGAAGATTAAGGTCGTGGCGCCTCCAGAGAGGAAGTACAGTGTCTGG
ATCGGTGGCTCCATCCTTGCCTCCCTCAGCACATTCCAGCAGGTA-----------------------------------
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>chr4A_1645
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------------------------------------------------------------------TCCGGCTGGATCTT
GCGGGCCGTGATCTGACCGACTCCCTGATGAAGATCCTCACGGAGAGGGGCTATTCCTTCACCACAACTGCTGAGCGGGA
AATCGTAAGAGATATAAAGGAGAAGCTCGCCTACGTCGCCCTTGACTACGAGCAGGAGCTGGAGACCGCCAAGAGCAGCT
CGTCCGTCGAGAAGAGCTACGAACTGCCTGACGGGCAGGTCATCACGATCGGCGCCGAGAGGTTCAGGTGCCCGGAGGTG
CTGTTCCAGCCGTCGCTGATCGGCATGGAGGCTCCTGGGATCCACGAGACCACCTACAACTCCATCATGAAGTGCGACGT
GGATATCAGGAAGGACCTCTACGGCAACATTGTGCTCAGTGGAGGGACGACCATGTTCCCCGGCATCGCCGACAGGATGA
GCAAGGAGATCACCGCCCTCGCGCCGAGCAGCATGAAGATCAAGGTCGTGGCGCCTCCCGAGAGGAAGTATAGTGTCTGG
ATCGGTGGCTCCATCCTCGCCTCCCTCAGCACATTCCAGCAGGTA-----------------------------------
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>SNPs
------------------------------------------------------------------------------S-
--------SS-SSSSSSSSSSS----------------------------------------------------------
-------------------------------------------------------------------------------S
SS------------------------------------------------------------------------------
SS-SSSSS------------------S----------------------------------------------------S
-------SS-SSSS--S--SSSSS-SSSSSSSSSS---------SS-----------------S-------------S--
SS---------S--S----S-----S---------S-----S--SS---------S--SS-S-SSSSSSSS----S----
----S------------SSSSSSSSSSSSSSSSSSSSSS----------SS-----------------------------
--------------------------------S----------------------S------------------------
-------------S--------------------------S-S--S----------------------------------
--S---S--------S------------------SSSSSSSSS------S--S----S---------S----------S-
---SS-------SS-------S------------------S--------------------------------SS-----
----S----------S-----------------------S----------------------------------------
---------S-----------S----------------------------------------------------------
-------------------------------------------------------------------------SSS----
---------------------------------S----------------------S-S---SS-----SS---------
--------------S-----------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------------------S------
-----------------S--------------------------------------------------------------
---------------------------------------------------------------S----------------
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-----S--------------------------------------------------------------------------
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---------------------------------------------------------------------------S----
----------------S-----------------------------S-----------------------------S---
---------------------------------------------S---------S-S--------SSSSS---------
----------S------------S--S----------------------S---------SS-------------------
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-----------------------S---------S----------------------------------------------
---------------S--------------------------------------S-----S-------------------
------------SSS-SS-----------------------------------S--------------------------
--------------------------------------------------------------------------------
-----------S--S--------------------S---------S----------------S-----------------
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
-----S--S------------------------S--S-------------S---SS--------------------S---
-------S--------S--------------------S-----S-S-SS-----------S--------S---S----S-
-------------SS-SSSS------------------------------------------------S-----------
------S----------------S-----S-------------S---------------------------S--------
--S-----------------S-------SSS--------------------S---------S--------------S---
-----S---------------------------SS----S-------------------S--------------------
---S-------------------S--SS-------S----------
>forward_565
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-----------------------------------------------------------------TGCTACCGTCGATGG
TGTTC---------------------------------------------------------------------------
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>reverse_2347
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--------------------------CCGAGATTAATGGCGTGCCT----------------------------------
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>forward_1270
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--------------------------------------------------CCATCCTTCCGTTGCAAACC----------
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>reverse_3140
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-------------------CATTCGAGTCGGGCATCAGA-----------------------------------------
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