>input_sequence_54006
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--------------------------------------------------------------------ATGTCGA-----
-------------------TCTTCAAGCGCCTCCTCCAGTTCAGTGTCATCTCTGTTGCCATAGCTGTTGCCGTGCAGCC
TCTGACGTCCTCGCTGCCGCCTCCGGTCGACCCTCACGCTAAGCTCGCCCGTGGCGGCGGGTGGGATGCGGCGCTCCTCG
ACCCGCTCGACGCCGGCCTCCGCGCGGAGATACTCAGGTACGGCGACCTCGCGCAGGCCACCTACGACGCCTTCGACGGC
CGCCACTGGTCCAAGAACTGCGGCACCTGCCTCCACGGCCTCCGTCGCATGCTCCCGGCCCTCGGGCTCGCCGGCCACGG
GTACGTCGCCACCGCGTTCATCTACACAACCTGCGACGTCGATATCCCCCGGTGGCTCATGGCGCGGCTCCACGCCGACG
CCTGGGACGACCACGCCAACTGGGCCGGGTACGTCGCGGTCGCCGGCGCCGAGGAGGCCAGCCGCGTCGGGCACCGGGAC
GTCGTCGTCGTGTGGCGCGGCACGATGGCCGCGGAGGAGTGGTTCATGGACCTGAGGACGGGCCTCGTGCCGTTCCACGC
CGCCGACGGCGACGGCGCCATGGTGGCCGAGGGGTTCCATACCTTGTACACGTCCAGCAACGCCGGGAACAAGTACGGCG
CGCGCAGCGCACGTGACCAGGTCGCCGACGAGCTCAAGCGGCTGGTGGACCACTTCGGGAAGCGCGGCGAGGAGGTCCAC
GTCACCTTCACAGGGCACAGCCTCGGCGGCGCGCTGGCCCTGCTCTCCGCCAGGGACGCCGCGGCCGCGCACCCGGACGT
CCCCGTCCGCGCCGTCACCTTCTCCGCGCCGCGCGTCGGCAACAGGGCCTTCTGCGACGGCCTCACGTCGCGCAACGTCA
GCGTCCTGCGCGTCGTCGTCAAGACCGACCTCGTGCCGACCGTCCCCCGGACGGCGCTCGAGACCTCCGTCTCCGGGGTG
CTGGGCGGCCTGTGGGCGCTGGCTGGACTCCGGCAGGCGTTCGAGTACGTGCACGTCGGCCACGAGCTCGCGCTGAACGT
CTCCAAGTCGCCGCACCTCAAGGACTCTCACGACCCGGTGGGGTCCCACAACCTGGAGCTGTGCTTGCACCTGCTGGACG
GCCACGAGAGCGCCGCCGGCGCGTTCCGGCGAGAGGACGGTGCGCCGCGGCGTGACGTCGCGCTGGTGAACAAGCGTTCG
GCGATGCTGCGCGACACGGAGGGCATTCCGGAGAAGTGGTGCCAGACGGCGAACAAGGGGCTCGAACGCGACGGGTCCGG
CCGGTGGGTGCTGCCGGCGCGGGAGCGCGACGACATGCCCGCGAACGACGTGCTGCCGCTGTCGGAGCTGGACTAA----
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>chr5D_1_TraesCS5D01G044200
AAAAT-CGAATTAAAAATACGTTTTTACCATTAAATCCGTCTCGACGAGATATTCAAAACTAGACCCCATGTTGATATGT
TTCGACG-A--ATTT-TTTTTCCTCAAAAGTCGCCATGATGTTTACACTATAGTTGCCACAGTGCTTAAAGTAAAGTTGC
CATGTGGCAATTTCAGTTTGTAGAGCATGGCAATTTTTAGTATTTTG-ATGATGGAAACTCTAGTACTTTGACCATGAAA
ATTAATTTTTATATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTTATGGTTCATGGCAAGTCTAGT
TTCTTAATTTCTCATTTTATAG-ATGTC-AAAATTTACTTTTAAATGTAAAAAAAAATAGCTAAAACATATCATGGCAAC
TT-CAGTGTAAACACCATGTCAATTCAAGTGCAATATACATGGCAACTTATAA---C--AAAA-AAAATCGTCAAACTAT
ATTGATATGAGATATAGTTTCGAAGATCTTGTCGCGAGGGATTTAATGGTGAAAACAGATCTTCAATCGGATTTTTCATT
TAAGAGATAAAACATTTAAAAAACTGAAAATCCAAAAAAAAATCTCACATGCATGCATACGATGACGTGGCGCAGTCTGT
GTGTT----AGCGTGTGGGCGGGTTTCGTTCCCACCACACGTGTGGGCGTTACCGTTGTCCAAACAACAAATATGCCAAG
TGGTATGATGCTACATGGCGTAGGAGTGCGAACCATAGGAAGCTTCCCCTCTGCGTTTCGTCCATTATTTTTTGTGACCT
TCTCATCGCCGGCCGTCTTCTTTCTGGGCCGTCGTTCCGTTGAACTCGGGACCAAGTGGATC-GAGCGACGACTCACCCC
GCCGGTAGGTGATCACCACTGGCCACC---TAGTATATGCCTATATCTACTTCCGTACCACGACCATGCACAGGCAGAGC
TGCGAATGCAATACAACTCAACAC--GGCCGATCTTGAGCGCCGGCGAGCGAGCT---CTGCCCGTAGATGTCGA-----
-------------------TCTTCAAGCGCCTCCTCCAGTTCAGTGTCATCTCTGTTGCCATAGCTGTTGCCGTGCAGCC
TCTGACGTCCTCGCTGCCGCCTCCGGTCGACCCTCACGCTAAGCTCGCCCGTGGCGGCGGGTGGGATGCGGCGCTCCTCG
ACCCGCTCGACGCCGGCCTCCGCGCGGAGATACTCAGGTACGGCGACCTCGCGCAGGCCACCTACGACGCCTTCGACGGC
CGCCACTGGTCCAAGAACTGCGGCACCTGCCTCCACGGCCTCCGTCGCATGCTCCCGGCCCTCGGGCTCGCCGGCCACGG
GTACGTCGCCACCGCGTTCATCTACACAACCTGCGACGTCGATATCCCCCGGTGGCTCATGGCGCGGCTCCACGCCGACG
CCTGGGACGACCACGCCAACTGGGCCGGGTACGTCGCGGTCGCCGGCGCCGAGGAGGCCAGCCGCGTCGGGCACCGGGAC
GTCGTCGTCGTGTGGCGCGGCACGATGGCCGCGGAGGAGTGGTTCATGGACCTGAGGACGGGCCTCGTGCCGTTCCACGC
CGCCGACGGCGACGGCGCCATGGTGGCCGAGGGGTTCCATACCTTGTACACGTCCAGCAACGCCGGGAACAAGTACGGCG
CGCGCAGCGCACGTGACCAGGTCGCCGACGAGCTCAAGCGGCTGGTGGACCACTTCGGGAAGCGCGGCGAGGAGGTCCAC
GTCACCTTCACAGGGCACAGCCTCGGCGGCGCGCTGGCCCTGCTCTCCGCCAGGGACGCCGCGGCCGCGCACCCGGACGT
CCCCGTCCGCGCCGTCACCTTCTCCGCGCCGCGCGTCGGCAACAGGGCCTTCTGCGACGGCCTCACGTCGCGCAACGTCA
GCGTCCTGCGCGTCGTCGTCAAGACCGACCTCGTGCCGACCGTCCCCCGGACGGCGCTCGAGACCTCCGTCTCCGGGGTG
CTGGGCGGCCTGTGGGCGCTGGCTGGACTCCGGCAGGCGTTCGAGTACGTGCACGTCGGCCACGAGCTCGCGCTGAACGT
CTCCAAGTCGCCGCACCTCAAGGACTCTCACGACCCGGTGGGGTCCCACAACCTGGAGCTGTGCTTGCACCTGCTGGACG
GCCACGAGAGCGCCGCCGGCGCGTTCCGGCGAGAGGACGGTGCGCCGCGGCGTGACGTCGCGCTGGTGAACAAGCGTTCG
GCGATGCTGCGCGACACGGAGGGCATTCCGGAGAAGTGGTGCCAGACGGCGAACAAGGGGCTCGAACGCGACGGGTCCGG
CCGGTGGGTGCTGCCGGCGCGGGAGCGCGACGACATGCCCGCGAACGACGTGCTGCCGCTGTCGGAGCTGGACTAACGCG
TCAGATGATTTGGCCATGTAGCATTACTCATGCACTAGTAGTATGCCCAGAACTCCTTTCGTTTCATGTCTTTGCATGTG
CGCCCAGGCACTGGGCCCCAGTGTCAGCTTGCTTAGTTTGTTGATAAGTTGTACATTTGCAAGTTTCTTAATTGCAGTTC
AACAAAAAACA----AAATTGTTACAATTATCATTAGCCCTCACATTAATCCTAAGAGATAACAACGTAAGCCACCAGAT
CCAGCTTAAGTGAAAATTATGGGTATTCACAAGTCGCATGACTATTTTTTCTGGTGTAAGTCACTTTTTTCTTCGTTCCG
TACTCCTATTTTTTACA--AGTTAAATACACCGGAGTTGCTAAACTTATCTGTGTAGTCATTTTGGTGTCTAAAGTTACA
AAAGACTGGTGCTTAAACTTGTCCGACCGTGTACATACAGTGTCTCGTTCCTTTCTCGTTCCTTATTCGGACGTACACCC
TGCCGCGTGGCATGGCCCACATGTCAGTGGCTAAGAGCAGGGGAGGCGCAGGGTGCCCCACACGCAAGGATTTTTTCACA
GAAACCAGCCTCATATTTTATTTAATACGTACGAAACCCTGAAATACAATGTAAATAATAACATGAAAAAAAACTTGGAG
GAGGGGTTTCGAAACTGCCACCTGGTTAACTACCTGCACAATTTGGCCACCCGACAGAACTATGCTTTGTGCAAAATTCT
TTTAGCTTGAAAGCTATGTAGTTCCATCGTATCGCTCTGCAATTTTTCTAATGCATTGCCTACCTGTTTTATTTTTATTT
TTCTCCAAATTCCTGTTTAGTCTCATGACACATAAGTTATCCCATATGAAAAGTACAATAATTATCAATATGCAATTATT
GTGTATTTGAAATCTTTTTCTATTTTCATTATTGTGTACTTTGAAGAGGTAAATCGAAAAATTTAAGTGGATTTAAATGC
TTCAACCTCTATAAATTATTGCATAAATTGATGTATCTTCGT
>chr5D_1
AAAAT-CGAATTAAAAATCCATTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCCCAT--TGATATGT
TTCGACG-A--ATTT-TTTTTGCCCAAAAATTGCCATGATGTTTACACTGTAGTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGGCAATTTTAGTTTGTAGAGCATGGCAATTTTAGT--TTTTT-ATGATGGCAATTCCAGTACTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGACAATTTTAGTTTATGGTTCATGGCAAGTCTAGT
TTCTTAATTCCCCGTTTTATAATATGTC-AAAATTTGCTTTTAAATGTAGAAGAAAATAGCTGAAACATATCATGGCAAT
TT-CAGTGTAAACATCATGGCAATTAGTATGCAATAGACATGACAACTTTTAACC-A--AAAA-AAATTCGTCGAAATAT
ATTGATATAAGATCTAGTTTCGAAGATCTCGTCGCGAGGGATTTAATAGTGAAAACGGATTTTCAATCGGATTTTTCATT
TAAGAGATAAAACATTTTAAAAACTGAAAATCCAAAAATAT-TCTCACATGCATGCATGCGGTGACGTGGCGCAGTCTGT
GTGTTATAGGGCGTGTGGGCGTGTTTGGCTCCCACCACATGTGTGGGCGTTAGCGTTGTCCA--CAAGAAATATG-----
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>chr1A_1
AAACATCGAATTAAAAATCTGTTTTTACCATTAAATCCGTCTCGAGAAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTCGACG-A--ATGT-TTTTTTCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGGCAATTTCAGTTTGTAGAGGATGGCAATGTTAGT--ATTTTGATGATGGCAACTCCAGTACTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGGCAATTTTAGTTT-TGGTTCATGGCAAGTTTAGT
TTCTTAATTCTCCATTTTATAA-ATGTC-AAAATTTACTTTTAAATGTAGAAGAAAATAGCTAAAATATATCATGGCAAC
TT-TAGTGTAAACACCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACC-C--AAAA-AAATTCGTCGAAATAT
ATTGATATGAGATCTAGTTTCGTAGATCTCGTCACGAGGGATTTAATGGTGAAAATGGATCTTCAGTCAGATTTTTCATT
TAAGAGATAAAACATTTAAAAAACTGAAAATCCAAAAAGAT-TCCCACATGCATGCATGTGTTGACGTGACGCAGTTTGT
GTGTTATAGGGCGTGTGGGCGGGTTTCGCTCCCACCACACGTGTGGGTGTTAGCGTTGTCC-------------------
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>chr4D_1
AAAAT-CGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACAAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTCGACGAA--ATTT-TTTTTGCCCAAAAGTTGCCATAATGTTTACACTGTAGTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGGCAATTTCTGTTTGTAGAGCATGGCAATTTTAGT--ATTTTGATGATGGCAACTCCGGT-CTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAATGCATGTATCATGGCAATTTTAGTTTATGGTTCAAGGCAAGTCTAGT
TTCTTAATTCCCCGTTTTATAA-ATGTCAAAAAATTACTTTTAAATGTAGAAGAAAATAGCTGAAACATATCATGGCAAC
TT-CAATGTAAACACCATGACAAATCATGTGTAATAGACATGGCAACTTTTAACC-CT-AAAA-AAATTCATCGAAATAT
ATTGATATGAGATCTAGTTTCGAAGATCTCGTCGCGAGGGATTTAATGGTGAAAACGGATCTTCAATCAGACTTTTCATT
TAAGAGATAAAACATTTTAAAAACTGAAAATCCAAAAAGAT-TCTCACATGCATGCATGCGATGACGTGGCGCAGTCTGT
GTGTTGTAGGGCGTGTGGGCGGGTTTAGCTCCCACCACACGTGTGGGCGTTAGCAGTGTCCTAAAAAAAAT---------
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>chr3D_1
AAAAT-TGAATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCGCATGTTGATATGT
TTCGACGGA--TTTT-TTTTTGCCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGGCAATTTCAATTTGTAGAGCATGACAATTTTAGT--ACTTCGATGATGGCAACTCCAATACTTTGACCATAAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTGTCATGGCAATTTTAGTTTATGGTTCATGGAAAGTCTAGT
TTCTTAATTCCCTATTTTATAA-ATGTC-AAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACATATCATGGCAAC
TT-CAGTGTAAACATCATGGCAATTCATGTGCAATAGACATGGCAACTTTTGACTTC--AAAA-AATTTCGTCGAAATAT
ATTGATATGAGATCTAGTTTCGAAGATCTCGTCGCGAGGGATTTAATGGTGAAAACGGATCTTCAATCGGATTTTTCATT
TAAGAGATAAAACATTTTAAAAACTGAAAATCCAAAAAAAT-TCTCACATGCATGCATGCGGTGACGTGGCGCAGTTCGT
GTGTTATAGGGTGTGTGGGCGGGTTTGGCTCACACCACACGTGTGGGCGTTAGCGTTGTCCTAAA---------------
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>chr7D_1
AAAAT-TGAATTAAAAATCCATTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCGCATCTTGATATGT
TTCGACGAAATTTTT-ATTTTACCCAAAAGTTGTCATAATGTTTACACTGTATTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGGCAATTTCAGTTTGTAGAGCATGGAAATTTTAGT--ATTTTGATGATGGCAACTCCAGTACTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGACAATTTTAGTTTATGGTTCATGGCAAGTCTAGT
TTCTTAATTCCTCATTTTATAA-ATGTC-AAAATTTACTTTTAAATGTAGAAGAAAATAGCTGAAACATATCATGACAAC
TTTTAGTGTAAACACCATGCCAATTCATGTGCAATAGACATGGCAACTTTTAACC-C--AAAA-AAATTCGTCGAAATAT
ATTGATATGAGATCTAGTTTTGAAGATCTCGTCGCGAGGGATTTAATGGTGAAAACGGATCTTTAATCAGATTTTTCATT
TAAGAGATAACACATTTTAAAAAGTGAAAATCCAAAAAGAT-TCTCACATGCATGCATGTGATGACGTGGCGCAGTCTGT
GTGTTATAAGGCGTGTGGACGGTTTTCACTCCCACCACACGTGTGGGCGTTAGCGTTG----------------------
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>chr7D_1
AAAAT-CGAATTAAAAATCCGTTTTCACCATTAAATCCATCTCGACGAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTTGATG----ATTT-TTTTTGCCTAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTTCTTAAACTAAAATTGC
CATGTGGCAATTTCAGTTTGTAGAGGATGACAATTTTAGT--ATTTTGATGATGGCAACTCCAGTACTTTAACCATGAAA
AGTATTTTTTGTATGAACCATGGCAATTCTAAGTGCATGTATCATGGCAATTTTAGTTTATGGTTCATGGTAAGTCTAGT
TTCTTAATTCTCCATTTTATAA-ATGTC-AAAATTTACTTTTAAATGTAGAAAAAAATAGCTGAAACATATCATGGCAAC
TT-CAGTGTAAACACCATGGCAATTCATGTGCAATAGACATTGTAACTTTTAACC-CCCAAAA-AAAATTGTCGAAATAT
ATTGATATGAGATCTAGTTTCGAAGATCTCGTCGCGAGGGACTTAATGGTGAAAACGGATCTTCAATCGAATTTTTCATT
GAACAGATAAAACATTTTAAAAACTGAAAATCCGAAAAGAT-CTTCACATGCATGCATGCGGTGACGTGGCGCAGTCTGT
GTGTTATAGAGCGTGTGGACGGGTTTCGTTTCCACCACACGTGTGGGTGTTAGCGTTGTCC-------------------
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>chr6B_1
AAAAA-CGAATTAAAAAACCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTCGATGAA--TTTT-TTTTGGCCCAAAAGTTGCCATGATGTTTACGCTATAGTTGCCATAGTGCTTAAACTAAAGTTGC
CATGTGCCAATTTGAGTTTGTAGAGCATGGCAATTTTAGT--TTTTTGATGATGGCAACTCCAGTACTTTGATCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGTATCATGACAATTTTAGTTTATGGTTCATGGCAGGTCTAGT
TTCTTAATTCCCCATTTTACAA-ATGTC-AAAATTTACTTTTAAGTGTAGAAGAAAATAGCTGAAATATATCATGACAAC
TT-CGGTGTAAACACCATGGCAATTCATGTGCAATAGACATGGCAACTTTTAACC-CCC-AAA-AAATTCGTCGAAATAT
ATTGATATGAGATCTAGTTTCAAAGATCCCGTCGCGAGGGATTTAATGGTGAAAACAGATCTTTAATCAGATTTTTCATC
TAAGAGATAAAACATTTTAAAAACTAAAAATCCAAAAAGAT-TCTCACATGCATGCATGCGGTGACGTGGCGCAGTCTAT
GTGTTATAGGACGTGTGGGCGGGTTTCGCTCCCACCACACGTGTGGGCGTTAGCGTTGTCCA------------------
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>chr6D_1
AAAAT-CGAATTAAAAATTCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTCGACA-A--AAAAATTTTCGCCCAAAAGTTGGCATGATGTTTACACTATAGTTGCCATAGTGCTTAAACGAAAGTTGC
CATGTGGCAATTTTAGTTTGTAGAGCATGGCAATTTTAGT--ATTTTGATGTTGGCAACTCCAGTACTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTTAAGTGCATGCATCATGACAATTTTAGTTTATGGTTCATGGCAAGTTTAGT
TTCTTAATTCCCTGTTTTATAA-ATGTC-AAAA-TTACTTTTAAATGTAGAAAAAAATAGCTTAAACATATCATGACAAC
TT-TAGTGTAAATACCATGGCAATTCATGTGCAATAGACATGACAACTTTTAACC-C--AAAAAAAATTTGTCGAAACAT
ATTGATATG-GATCTACTTTCGAAGATCTCGTCGCGAGGGATTTAATGGTGAAAACAGATCTTCAATCGGATTTTTCATT
TAAGAGATAAAATATTGTAAAAACTGAAAATCTAAAAAAAT-TTCCACATGCATGCATGCGATGACGCGGCGCAGTCTGT
GTGTTATATAACGTGTGGGCGGATTTCGCTCCCACCACACGTGTGGGCGTTAGCGTTGTCCAAA----------------
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>chr4D_8
--------AATTAAAAATCCGTTTTCACCATTAAATCCGTCTCGACGAGATCTTCAAAACTAGACCCCATGTTGATATGT
TTCGACGAA--ATTT-TTTTTACCCAAAAGTTGCCATGATGTTTACACTGTAGTTGCCATAGTGCTTAAACTAAAGTTGC
GATGTGTCAATTTTAGTTTGTAGAGCATGGCAATTTTAGT--TTTTCGATGATGGCAATTCCAGTACTTTGACCATGAAA
ATTATTTTTTGTATGAACCATGGCAATTTGAAGTGCATGTATCATGGCAATTTTAGTTTATGGTTCATGGCAAGTCTAAT
TTCTTAATTCCCCGTTTTATAATATGTC-AAAATTTACTTTTAAATGTAGAAGAAAATAGCTAAAACATATCATGGCAAC
TT-CAGTGTAAACATCATGGCAATTCATGTGCAATAAACATGGCAACTTCTAAT------AAA-AAAATCGTCAAAATAT
ATTGATATGAGATCTAGTTTCGAAGATCTCGTCGCGAGGGATTTAATGGTGAAAACAGATCTTCAATCGGATTTTTCATT
TAAGAGATAAAACATTTTAAAAACTGAAAATCTAAAATGAT-TCCCACATGCATACATGCAGTGACGTGGCGCAGTCTGT
GTGTTATAGGACGTGTGGGCGGGCTTGGCTCCCACTACACGTGTGGGCGTTAGCGTTGTCC-------------------
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>chr5B_683
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-------------------------------------------------------------AAACAACAAATATGCCAAG
TGGTATGATGCTACGTGACGTAGGAGTGCAAACCTTAGGAAGCTTCCCCTCTGCGTTTCGTCCATTATTTTTTGTGACCT
TCTCATCGCCGGCCGTCTTCTTTCTGGGCCGCCGTTCCGTTGACCTCGGTACCAAGTGGATCTGAGCGACGACTCACCCC
GCCGGTAGGTGATCACCACTGGCCACC---TAGTATATGCCTATATCTACTTCCGTACCACGACCATGCACAGGCAGAGC
TGCGAATGCAATACAACTCAACACACGGGCGATCTTGAGCGCCGGCGAGTGAGCT---C---CCGTCGATGTCGATCACC
GGTCGTAGCTTGGCCGCCGTCTGCAAGCGCCTCCTCCAGTTCACTGTCATCTCTGTTGCCATAGCTGTTGCCGTGCAGCC
TCTGACGTCGTCGCTGCCGCCTCCGGTCGACCCTCACGCTAAGCTCGCCCGTGGCGGCGGGTGGGATGTGGCGCTCCTCG
ACCCGCTCGACGCCGGCCTCCGCTCGGAGATACTCAGGTATGGCGACCTCGCGCAGGCCACCTACGACGCCTTCGACGGG
CGCCACTGGTCCAAGAACTGCGGGACCTGCCTCCATGGCCTCCGTCGCATGCTCCCGGCGCTCGGGCTCGCCGGCCACGG
GTACGTCGCCACTGCGTTCATCTACACGACCTGCGACGTCGATATCCCGCGGTGGCTCATGGCGCGGCTCCACGCGGACG
CCTGGGACGACCACGCCAACTGGGCCGGGTACGTCGCGGTCGCCGGCGCGGAGGAGGCCAGCCGCGTAGGCCACCGGGAC
ATCGTCGTCGTGTGGCGCGGCACCATGTCGGCGGAGGAGTGGTTCATGAACCTGAGGACGGGCCTCGTGCCGTTCGACGC
CGCCGACGGCGACGGCGCCATGGTGGCAGAGGGGTTCCACACCTTGTACACGTCAAGCAACGCCGGGAACAAGTACGGCG
CGCGCAGCGCCCGTGATCAGGTCGCCGACGAGCTCAAGCGGCTGGTGGGCCACTTCGGGAAGCGCGGCGAGAAGGTCCAC
GTCACCTTCACGGGGCACAGCCTCGGCGGCGCGCTGGCCCTGCTCTCCGCCAGGGACGCCGCAGCCGCGCACCCGGACGT
CCCCGTCCGCGCCGTCACCTTCTCTGCGCCGCGCGTCGGCAACAGGGCCTTCTCCGGCGGCCTCACGTCGCGCAACGTCA
GCGTCCTGCGCGTCGTCGTCAACACCGACCTCGTGCCGACCGTCCCCCGGACGGCGCTCGAGGCCTCCGTCTCCGGGGTG
CTGGCCGGCCTGTGGGCGCTGGCCGGCCTCCGGCAGGCGTTCGAGTACGTGCACGTCGGCCACGAGCTCGCCCTGAACAT
CTCCAAGTCGCCGCACCTCAAGGACTCTCACGACCCGGTGGGGTCTCACAACCTGGAGCTGTGCCTGCACCTGCTGGACG
GCCACGAGAGCGCCGCCGGCGAGTTCCGGCGGGAGGACGGTGCGCCGCGGCGTGACGTCGCGCTGGTGAACAAGCGTTCG
GCGATGCTGCGCGACACGGAGGGCATTCCGGAGAAGTGGAGCCAGACGGCGAACAAGGGGCTCCAGCGCGACGGGTCCGG
CCGGTGGGTGCTGCCGGAGCGGGAGCGCGACGACATGCCGGCGAACGACGTGCTGCCGCTGTCGGAGCTGGACTAACGCG
TCGGATGATTTGGCCATGTAGCATTACTCATGCACTAGTAGTATGCCCAGAACTCTTTTCGTTTCATGTCTTTGCATGTG
CGCCA--------------AGTGTCAGCTTGCTTAGTTTGTTGATACATTGTACATTTGCAAGTTTCTTAATTGCAGTTC
AACCAAAAATCTAGTAAATTGTTACAATTATCATTAGCCCTCACATTAATCCTAAGAGATAACAATGTAAGCCACCAGAT
CCAGCTTAAGTGAAAATTATGGGTATTCACAAGTCGCATGACTATTTTTTCTGGTGTAAGTCACTTTTTTCTTCGTTGTG
TATTTCTAGTTTTTTACCTAGTTAAATACACTGGAGTTGCTAAACTTATCTGTGTAGTTATTTTGGTGTCGGAAGTTACA
AAAGACTGGTGCTTAAACTTGTTCGACCGTGTACATACAGTGTCTCCTTCCTTATG-----------CGGACGTACACCC
TGCCGCATGGCATGGCTCACATGTCTGTGGCTAAGAGCGGGGGAGGCGCAGGGAGCCCCACACCCGAGGATTTTTTCACA
GAAACCAGCCTCATATTTTATTTAATACGTACGAAACCCTCAAATACAAAGTAAATAATA-CATGAAAAAAAACTCGGAG
GAAGGGTTTCGAAACTGCCACCTGGTTAACTACCTGCACAATTTGGCCACCTGATAGAACTATGCTTTGCACAAAATTCT
TTTAGCTTGAAAGCTAAGTAGTTCCATCGTATCGCTCTGCAATTTTTCTAATGCATTGCCTACCTGTTTTATTTTTACTT
TTCTCCAAATTCCTATTTAGTCTCATGACGCATAACTTATCCCATATGAAAA-TACAATAATTATCAATATGCAATTATT
GTGTATTTGAAATATTTTTCTGTTTTCATTATTGTGTACTTTGAAGAGGTAAATCAAAAAATTTAAGTGGATTTAAATAC
TTCAACCTCTATAAATTATTGCATAAATTGATGTATCTTCGT
>chr5A_683
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-------------------------------------------------------------AAACAACAAATATGCCAAG
TGGTATGATGCTA-------------------------------------CTGCGTTTCGTCCATTATTTTTTGTGACCT
TCTCATCGCCGGCCGTCTTCTTTCTGGGCCGCCGTTCCGTTGACCTCGGGACCAAGTGGATCTGAGCGACGACTCACCCC
GCCGGTAGGTGCTTGCCACTGGCTACCTAGTAGTATATGCCTATATCTACTTCCGTACCACGACCATGCACAGGCAGAGC
CGCGAATGCAATACAACTCAACAC--GGCCGATCTTGAGCGCCGGCGAGCGAGCCCTGC---CCGTCGATGTCGATCGCC
GGTCGTAGCCTGGCCGCCGTCTTCAAGCGCCTCCTCCAGTTCACTGTCATCTCTGTTGCCATAGCTGTTGCCGTGCAGCC
TCTGACGTCCTCGCTGCCGCCTCCTGTCGACCCTCACGCTAAGCTCGCCCGTGGCGGCGGGTGGGATGCGGCGCTCCTCG
ACCCGCTCGACGCCGGCCTCCGCTCGGAGATACTCAGGTATGGCGACCTCGCGCAGGCCACCTACGACGCCTTCGACGGC
CGCCACTGGTCCAAGAACTGCGGCACCTGCCTCCACGGCCTCCGTCGCATGCTCCCGGCCCTCGGGCTCGCCGGCCACGG
GTACGTCGCCACCGCGTTCATCTACACAACCTGCGACGTCGATATCCCCCGGTGGCTCATGGCGCGGCTCCACGCCGACG
CCTGGGACGACCACGCCAACTGGGCCGGGTACGTCGCGGTCGGCGGCGCGGAGGAGGCCAGCCGGGTCGGGCACCGGGAC
GTCGTCGTCGTGTGGCGCGGCACGATGGCGGCAGAGGAGTGGTTCATGGACCTGAGGACGGGCCTCGTGCCGTTCGACGC
CGCCGACGGCGACGGCGCCATGGTGGCCGAGGGGTTCCACACCTTGTACACGTCCAGCAACGCCGGGACCAAGTACGGCG
CGCGCAGCGCCCGTGACCAGGTCGCCGACGAGCTCAATCGGCTTGTGGACTACTTCGGGAAGCGCGGCGAGAAGGTCCAC
GTCACCTTCACGGGGCACAGCCTCGGCGGCGCGCTGGCCCTGCTCTCCGCCAGGGACGCCGCGGCGGCGCACCCGGGCGT
CCCCGTCCGCGCCGTCACCTTCTCCGCGCCGCGCGTCGGCAACAGGGCCTTCTGCGACGGGCTCTCGTCGCGCAACGTCA
GCGTCCTGCGCGTCGTCGTCAACACCGACCTCGTGCCGACCGTCCCCCGGACAGCTCTCGAGGCCTCCGTCTCCGGAGTG
CTGGGCGGCCTGTGGGCGCTGGTTGGACTCCGGCAGGCGTTCGAGTACGTGCACGTCGGCCACGAGCTCGCGTTGAACGT
CTCCAAGTCGCCGCACCTCAAGGACTCTCACGACCCGGTGGGGTCTCACAACCTGGAGCTGTGCTTGCACCTGCTGGACG
GCCACGAGAGCGCCGCCGGCGAGTTCCGGCGGGAGGACGGTGCGCCGCGGCGTGACGTGGCGCTGGTGAACAAGCGTTCG
GCGATGCTGAGCGACACGGAGGGCATTCCGGAGAAGTGGAGCCAGATGGCGAACAAGGGGCTCGAGCGCGACGGCTCCGG
CCGGTGGGTGCTGCCGGCGCGGGAGCGCGACGACATGCCGGCGAACGACGTGCTGCCGCTGTCGGAGCTGGACTAACGCG
TCCGATGAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
------------------S--------------------------------S----------------------------
---------------------S-S-------S---------------------------S----------S---------
-------------------------------------SSSSS----S--------S-----S------------------
----S-----S---------------------------------------------------------------------
---------S-----------S---------------------------S------------------------------
-------------------S-------S--------S------------S--------------------------S---
-------------S---------------S--------------------------------------------------
----------------------------------------SS----------------S---------------------
----------------------------------------------------S---------------------------
--------------S--S-----------S----S---------------------------------------------
-------------------------------S-----------S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SSS----S-------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-----------------------S----------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-----------------------------S---------------------------------------------S----
---------------------------------------S----------------------------------------
----------S------------------------------------------------------------S--------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------S---------S------------------------------------------------
---------------------------------------S-------------------------S--------------
---------------------------------------S----------------------------------------
--S----------------------------------------------------S------------------------
----SSSSSSSSSSSSSSS---------------------------SS--------------------------------
---S-----SS------------------------------------------------------S--------------
-----------------------------------------------------------------------------SS-
--S-S---S-----SSS--------------S--------------------------S-----------SS--------
----------------------S-----------------------S------SSSSSSSSSSSSSS-------------
------S---------S--------S------------S--------------S---------S-S--------------
----------------------------------------S--------S----------S--------------S----
--S------------------------------------------------S--S--------------SS---------
----------------S------------------------------------------------------------S--
--------------S--------------S-----S----------------S---------------------------
-------------S-------S---------------------------------S----------------------S-
------------------------------------------
>forward_750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CTACATGGCGTAGGAGTGCG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2496
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCCCAGTGTCAGCTTGCTTA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
