>input_sequence_53888
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-----------------------------------------ATGGCAGCCTCCTCGTGGCAAGT---GGCTCTTCTCGCC
GTTGCGCTCTGCGTGCTCCCTGCAGCCCTGCCGGCGGCGAGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCCTGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACCGGGCGCTTCTCCAACGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCGAGCTCATGCATGCATGGATA-
------CACATACACTTCACACCGTTCACCAGCCGTTTGTGCAGATT------------TTAA-GACCAACTGATTGATT
TAA------TTAACGATGTTGCACGCAGGCGAGCAGATAGGCTCCGTGCCGGTGCTGCCGTACCTGAGCCCGGAGCTGGA
CGGCCAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGGATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTT-CC-----TTCCACCGATCCATCGTTTCA--TCAATGCACACTTCATTCAATAATTAACTCTACTGAACA----
-TCTAATGA---------ATCGATGCTCCGTGCATCATCGTGCTCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTCACCTACTTCGAGCAGTACAA
GCACCGTCTCGCCAAGCTGTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACCCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGGTGCCCTACTCGGCGCGCTCCCGGGAGTTCTCCCTGCCGGACTACATCAAG
TACATTTTGTCCGAGTACAAGCAGGTTCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTCGTCACCGGCGTGGG
CCCCATCGGCTGCGTGCCCGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCAGAGCTGCAGCGCGCGTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTGAACGAGCTCAACGCCGAGGTCGGCTCCGGCGGCGGTAATGGAGCGGTG
TTCGTGGCCGTGAACACGCGGCGCATGCACGACGACTTCATCGCCGACCCCAAGGCGTACGGCTTCGTCACGGCCAAGGA
GGCGTGCTGCGGCCAGGGGAGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTGTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCACCGGCTCCACGGAC
TACATCTCCCCCATGAACCTCTCCACCATCCTCCATCTCGACCGCCACCTCCACGACTAG--------------------
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>chr6D_1_TraesCS6D01G372000
GAAACAGCGTGCAAAGATCCAATGCACATCTGAAAATGCCCACACCAACCAAACCCCAAAACCGGCAGGGAATTACTGTA
AACCACGGGACATAATTACCGGGAGGTTTTTTACGGTACCCTGGTACTCCTTTTTCCTAGACGAAGTACCCGTCAAATCT
AACCATTGGTTCAAAGGGGTAATTTTGGATTTTGTCATTAGTAATTCCGCCGCC---ATCCCCGATCAGGTTCACATGAA
GCCACCGTCGCCTGCACACCGGCCGCCGCCTCCGCAGCCTCTTGTCAAAACGATCAATGGAGATGGAGGCGCCGTTTGCA
-GCAGATCGTGCACTTGCAGTGGAGGATGTAACGCAGGCATAGATCCTTTGGGGACACCATCTCCATCACGTGGTCTCGC
CCAGCACCAATGCCATGACTTCTGTCAACGACCGGGAGATAGAGTGATCTCGTTTAATTGGACACCGCGCTTGTCGTCGG
CTCGTCGGCGAGGCCACATCCGTCCCCATGGCCGACCGAATTAGCTCACGAAATTAGGGT--------------------
----CTCAAGCGCCCAAATCGTTGATTAGTCTACAGATTACAATATTACCCTTGAACTCAAGGTACTCTGTGCCTTTTGA
TGATGGTACTCCCTGCCACTTCGGCTGGAGTACCCACTAGGCTGAGCCATCAGATTAGAACAAATGGACGGATCATATTT
ACTTCAGGGTACTGTAAAAGTGCTCATTACCGGAGAATTAAAGGTCCACGCGCAGGCACTGTGACCAGCAC--AGCA---
-GTGCACCAACC-GCACGTCGTACCGGGCCACGC-GGAGTAAATTCCGGCGACGACGACATG----ATCCAAGGAAGAGG
C--------CACTCACTA------------GATGCACAAGTGCTAGAAGGATAGAC--GATGCTCTATAAATGGTGACTG
CACGCAACGTTTCAGTGCATCCACC------------AAGTGTACACGCATACACTAGCTACAACATCTTACTCTCAGTG
GCAACTGGCAAGT-------GAGTGTGGAGCGATAGCAGCAATGGCAGCCTCCTCGTGGCAAGT---GGCTCTTCTCGCC
GTTGCGCTCTGCGTGCTCCCTGCAGCCCTGCCGGCGGCGAGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCCTGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACCGGGCGCTTCTCCAACGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCGAGCTCATGCATGCATGGATA-
------CACATACACTTCACACCGTTCACCAGCCGTTTGTGCAGATT------------TTAA-GACCAACTGATTGATT
TAA------TTAACGATGTTGCACGCAGGCGAGCAGATAGGCTCCGTGCCGGTGCTGCCGTACCTGAGCCCGGAGCTGGA
CGGCCAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGGATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTT-CC-----TTCCACCGATCCATCGTTTCA--TCAATGCACACTTCATTCAATAATTAACTCTACTGAACA----
-TCTAATGA---------ATCGATGCTCCGTGCATCATCGTGCTCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTCACCTACTTCGAGCAGTACAA
GCACCGTCTCGCCAAGCTGTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACCCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGGTGCCCTACTCGGCGCGCTCCCGGGAGTTCTCCCTGCCGGACTACATCAAG
TACATTTTGTCCGAGTACAAGCAGGTTCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTCGTCACCGGCGTGGG
CCCCATCGGCTGCGTGCCCGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCAGAGCTGCAGCGCGCGTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTGAACGAGCTCAACGCCGAGGTCGGCTCCGGCGGCGGTAATGGAGCGGTG
TTCGTGGCCGTGAACACGCGGCGCATGCACGACGACTTCATCGCCGACCCCAAGGCGTACGGCTTCGTCACGGCCAAGGA
GGCGTGCTGCGGCCAGGGGAGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTGTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCACCGGCTCCACGGAC
TACATCTCCCCCATGAACCTCTCCACCATCCTCCATCTCGACCGCCACCTCCACGACTAGAAGATCGATG----------
-----------GTTCAGCCTCGATCATTTGCAGTTCGATTGCTTATGCTTTTTC---------ATACCTGGCCTTCTTGA
TTTTGTCAAACAAAACGTTAATAATATA---TTCAGTAAGTACGTGTACGT-TATTTCAGCTAGTGTGTCAGGTTGAG--
-----GTTCTAGCTAGTTTTGTGATACGTGCTCAGCTAGCTTAGCCAGCAGATAAATCCATGGTTACCATCGAGGTACTT
GTGGTGTCATATCCGTGTACGTGTCGTGTATCTAGTACAGCCGGGTGGGTGATAATTGAATCCTGGATATGATCAAGATT
CTCGATTGTTCAGTATAGCTAGTTTCATTGTCTGAATCGATTTTTGG--CCCCTTGCATATCTGGCCCATGTTTTACATC
TTGTTTGGT-----------------------------------------------------------------------
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--------------------------------------------TGCCCGCGTTTTATAATTTTCGACT-----------
ATATGCTTTGTTTGGTTGCACACCTTGTGTCTGATGTGATTACCTTGCACCCCGATGTGGTGAGCTTACCAGCTACCACT
CAAATCAATGCTTTTACTGCATGTTACAACACAACAAAACAACAATAAAATGGACGAAAATTATGAAGTTCTTCAGCTCA
CTTAACCCAATCTGACATGCACCCTTGCCTTTCATGATTGCTCTTCTCTTAGAGCACGAACTTGTACTACTAATCCTCTC
CCTCCTCTCTAGTCACAAATCCTCTATAGAAACTATTCTTGTAACCGTTCACCTGTTCATGGCAATGTCTGCCATGAACC
ATAGATTCCCGGAGTCCTCCCTAAGTACATGACATCCACTTCATCTACCAAGACAGAAGAGCAAGATTTCAAGAAGCAAC
ATTAGCAACACATAACACAACATATGGAATAGAAGCAACATAAGGATGCGTCACTACCAGGGAAAACCCTATAGATAGAC
ACTTAACAACAATGCTGGGTAGGAGCCCC-CACTATTGTTACTTAGTAGCAACGCGGGGATTAATACCAAGCTACAAATA
ACAAGTAGTAGCAGCGTAGGCTTGCCAATC
>chr6A_11
----------GCAAAGATACAATGCACGTCTGGAAATGCCCACACCAACCAAACCCCAAAACCGGCAAGGAATTACTGTA
AACCACAGGACATA------------------------------------------------------------------
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-------------------------ATTACCAGAGAATTAAAGGTCCTCGCGCGAGCGCTGTGACGAGGCAGGGGCA---
-GTGCACCAACCCGCACGTCGT-CCGGGCCACGC-GGAGTAAATTCCGGCGACGACGGCATGCATGATCCAAGCAAGAGG
GTCAG-------TCACTA------------GATGCACAAGTGCCTACCTAGACAGATCCG----CTATAAATGGCGACGA
CACGCAACGTTTCAGTGCATCCACGAGGTCTAGGACTAGGTGCGCCAACACATACTACGGCA------------------
-------AGTGAGTGAAGTGGAGTGTGGAGCGCTAGCGGCAATGGCGGCCTCCTCGTGGCAAGT---GGCTCTTCTCGCC
TTCGCGGTCTGCGTGCTCCC---AGCCCTGCCGGCGGCGAGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCATGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCAGACCACC
GCGCCACGGGGAGGTTCTCCAATGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCGACCTCGTGCATTCATGGACG-
------CAC---------------TTCACCGGCCGTCGGTGG--------TATCTGTAGTTGA-GGCTAACTGGTTGATT
GGTTAACATTTAACAATGTTGCACGCAGGCGAGCAGATAGGATCCGTGCCGGTGCTGCCGTATCTTAGCCCCGAGCTGGA
CGGCGAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGAATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTT-CC-----TT-CACCGATCCATCCATCGTTT--AATGCACACTTCATTCAACAATTAACTCTACTGTACACACT
CTCTAATGC---------ATG--------------CA------TCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTGACCTACTTCGAGCAGTACAA
GCACCGGCTGGCCAAGCTCTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGGTGCCCTACTCGGCCCGCTCCCGGGAGTTCTCCCTCCCCGACTACATCAAG
TACATTTTGTCCGAGTACAAGCAGGTGCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTCGTCACCGGCGTCGG
CCCCATCGGCTGCGTGCCCGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCCGAGCTGCAGCGCGCGTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTCAACCAGCTCAACGCCGAGGTCGGCAGCGGGAACGGCAACGGCGCGGTG
TTCGTGGCAGTGAACACGCGCCGCGCGCACGACGACTTCATCGCCGACCCCAAGGCATACGGCTTCGTCACCGCCACCGA
GGCCTGCTGCGGCCAGGGCCGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTCTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCACCGGCTCCACCGAC
TACATCTCCCCCATGAACCTCTCCACCATCATTCACCTCGACCGACACCTCCACGACTAG--------------------
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>chrUn_103
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----------------------GAGGTTTTTTACAGTACCCTGGTACTCCTTTTCCCTAGATGGAGTACCCATCAAATCT
AACCATTGGTTCAAAGGGATAATTTTGGCTTTTGTCATTAGTAATTCCGCCGCCGTCATCCCCGATCAGGTTCACATGAA
GCCACCGTCGCCTGCACACCGGCCGCCGCCTCCGCAGCCTCCTGTCAAAATGATCAATGGAGATGGAGGCGCCGTTTGCG
GGCAGATCGTACACTTGCAGTGGAGGATGCAACGCAGACATAGATCCCTTGGGGACACCATCTCCATCACGTGGTCTCCC
CCAGCACCAATGCCATGACTTCTGTCAGCGACCGGGAGATAGAGTGATCTCGTTTAATTGGACACCGCGCTTGTCGTCGG
-TCGTTGGCGAGGCCACGT-CGTCCCCATGGCCGGCCGAATTAGCTCACGAAATTAGGGT--------------------
----CTCAAGCTCCCAAATCGTTAATTAGTCTATAGGTTACAATATTACCCTTGAACTCAAGGTACTATGTGCCTTTTGA
TGATGATACTCCCTGCCACTTCCGCTGGAGTACCCACTAGGCTGAGCCATCAGATTAGAACAAATGGACGGATCATATTT
ACTTCAGGGTATTGTAAAAGTGC---------------------------------------------------------
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>chr7D_103
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----------------------GAGGTTTTTTACAGTACCCTGGTACTCCTTTTCCCTAGATGGAGTACCCATCAAATCT
AACCATTGGTTCAAAGGGATAATTTTGGCTTTTGTCATTAGTAATTCCGCCGCCGTCATCCCCGATCAGGTTCACATGAA
GCCACCGTCGCCTGCACACCGGCCGCCGCCTCCGCAGCCTCCTGTCAAAATGATCAATGGAGATGGAGGCGCCGTTTGCG
GGCAGATCGTACACTTGCAGTGGAGGATGCAACGCAGACATAGATCCCTTGGGGACACCATCTCCATCACGTGGTCTCCC
CCAGCACCAATGCCATGACTTCTGTCAGCGACCGGGAGATAGAGTGATCTCGTTTAATTGGACACCGCGCTTGTCGTCGG
-TCGTTGGCGAGGCCACGT-CGTCCCCATGGCCGGCCGAATTAGCTCACGAAATTAGGGT--------------------
----CTCAAGCTCCCAAATCGTTAATTAGTCTATAGGTTACAATATTACCCTTGAACTCAAGGTACTATGTGCCTTTTGA
TGATGATACTCCCTGCCACTTCCGCTGGAGTACCCACTAGGCTGAGCCATCAGATTAGAACAAATGGACGGATCATATTT
ACTTCAGGGTATTGTAAAAGTGC---------------------------------------------------------
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>chr7D_103
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----------------------GAGGTTTTTTACAGTACCCTGGTACTCCTTTTCCCTAGATGGAGTACCCATCAAATCT
AACCATTGGTTCAAAGGGATAATTTTGGCTTTTGTCATTAGTAATTCCGCCGCCGTCATCCCCGATCAGGTTCACATGAA
GCCACCGTCGCCTGCACACCGGCCGCCGCCTCCGCAGCCTCCTGTCAAAATGATCAATGGAGATGGAGGCGCCGTTTGCG
GGCAGATCGTACACTTGCAGTGGAGGATGCAACGCAGACATAGATCCCTTGGGGACACCATCTCCATCACGTGGTCTCCC
CCAGCACCAATGCCATGACTTCTGTCAGCGACCGGGAGATAGAGTGATCTCGTTTAATTGGACACCGCGCTTGTCGTCGG
-TCGTTGGCGAGGCCACGT-CGTCCCCATGGCCGGCCGAATTAGCTCACGAAATTAGGGT--------------------
----CTCAAGCTCCCAAATCGTTAATTAGTCTATAGGTTACAATATTACCCTTGAACTCAAGGTACTATGTGCCTTTTGA
TGATGATACTCCCTGCCACTTCCGCTGGAGTACCCACTAGGCTGAGCCATCAGATTAGAACAAATGGACGGATCATATTT
ACTTCAGGGTATTGTAAAAGTGC---------------------------------------------------------
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>chr7B_207
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----------------------------------------------CCGCTGCC---ATCCCCAATCGGGG-CACATGAA
GCCACAGTCGACTACATACCGGCCGCTGCCTCCGCAGCCTCCTGTCAAAACGATCGATGGAGGTGGAGGCGCCGTTTT--
GGCAGATCGTGCACTTGGAGTGGAGAATGCAACGCAGGCACAGATT-CTTGGTGGCACCATCTCCATCACGTGGTCACCC
CCAGCACCAATGCCATGATTTCTGTCAGCGACTGGGATATAGAGTGATCTCATTTAATTGGACACGGTGCTTGTCGTCGG
CTAAGGTCATG-------TCCGTCCCCATGGCCGACCGAATTAGCTCATGAAATTAGGGTTTCCAAATCGGGGATACACC
AGTGCTCACGTGCCCAAACCATTAATTATCCTACAGGTTACAATATTACGCTTGAACTAAAGGTACTCTGTGCCTTTTGA
TGATGGTACTCCCTGCCACTTCCGCTGGAGTACCCACTACGCTGAGCCATCAGATTAGAACAAACGGAAGGATCATATTT
ACTTTGGGGTACTGTAAAAG------------------------------------------------------------
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>chr6D_718
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-------------------------ATTACCAGAGAATTAAAGGTCCTCGCGCGAGCGCTGTGACGAGGCA--GGCA---
-GTGCACCAACCCGCACGTCGT-CCGGGCCACGC-GGAGTAAATTCCGGCGACGACGGCATG----ATCCAAGCAAGAGG
GTCAG-------TCACTA------------GATGCACAAGTGCCTACCTAGACAGATCCG----CTATAAATGGCGACTA
CACGCAACGTTTCAGTGCATCCACTAGGTCTAGGACTAGGTGTACCAACACATACTACGGCA------------------
-------AGTGAGTGAAGTGGAGTGTGGAGCGCTAGCAGCAATGGCGGCCTCCTCGTGGCAAGT---GGCCCTTCTCGCC
GTCGCGCTCTGCGTGCTCCC---GGCCCTGCCGGCGGCGAGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCCTGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACGGGGAGGTTCTCCAATGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCGTGCTCGGGCATTCATGGATG-
------CAC---------------ATCACCAGCCGTACGTCGGTGGTATATATCTGTAGTTGA-GGCTAACAGGTTGATT
GATTGATTAC-AACAATGTTGCACGCAGGCGAGCAGATCGGATCCGTGCCGGTGCTGCCGTACCTGAGCCCGGAGCTGGA
CGGCCAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGGATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTGCCA-----TT-CACCTATCGATCTGTCGTTTTTCATGCACACTCCATTCAATAATTAACTGTACATA-------
CTCTAATGA---------AT----------TGCATCA------TCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTGACCTACTTCGAGCAGTACAA
GCACCGGCTGGCCAAGCTCTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTCACGCTCATCACCCTCGGCG
GCAACGACTTCGTTAACAACTACTACCTGGTGCCCTACTCCGCCCGCTCCCGGGAGTTCTCCCTCCCTGACTACATCAAG
TACATTTTGTCCGAGTACAAGCAGGTGCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTCGTCACCGGCGTCGG
CCCCATCGGCTGCGTGCCGGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCGGAGCTGCAGCGCGCCTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTCAACGAGCTCAACGCCGAGGTCGGCTCTAGCAATGGCAACGGCGCCGTG
TTCGTGGCCGTGAACACGCGGCGCATGCACGACGACTTCATCGCCGACCCCAAGGCGTACGGCTTCGTCACCTCCACCGA
GGCCTGCTGCGGGCAGGGGCGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTCTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCACCGGCTCCACCGAC
TACATCTCCCCCATGAACCTCTCCACCATCATCCACCTCGACCGCCACCTCCACGACTAG--------------------
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>chr6A_718
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-------------------------ATTACCGGAGAATTAAAGGTCCACGC-CAGGCACTGTGACCAGCAC--AGCA---
-GTGCACCAACC-ACACGTCGTACCGGGCCACGC-GGAGTAAATTCCGGCGACGACGACATG----ATCCAACCAAGTGG
C--------CACTCACGCACTCACTAGATGGATGCACAAGTGCCTACCTAGACGGATAGATGCTCTATAAATGGCGACTG
CACGCAACGTTTCAGTGCATCCACC------------AAGTGTACACGCATACACTAGCTACTACATCTCACTTTCAGTG
GCAACTGGCAAGT-------GAGTGTGGAGCGATAGCAGCAATGGCGGCCTCCTCGTGGCAAGT---GGCCCTTCTCGCC
GTCGCGCTCTGCCTGCTCCC---CGCACTGCCGGCGGCGGGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCATGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACGGGGAGGTTCTCCAATGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCAAGCTCGTGCATTCATGGATG-
------CTC---------------TTCACCAGCCGTCGGTGG--------TATTTAGAGGGCTTGGCTAACTAATGA--T
TGA------TTAACAATGTTGCACGCAGGCGAGCAGATAGGATCCGTGCCGGTGCTGCCGTATCTTAGCCCCGAGCTGGA
CGGCGAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGAATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTT-CC-----TT-CACCGATCCATCCATCGTTT--AATGCACACTTCATTCAACAATTAACTCTACTGTACACACT
CTCTAATGC---------ATG--------------CA------TCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTGACCTACTTCGAGCAGTACAA
GCACCGGCTGGCCAAGCTCTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGGTGCCCTACTCGGCCCGCTCCCGGGAGTTCTCCCTCCCCGACTACATCAAG
TACATTTTGTCCGAGTACAAGCAGGTGCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTCGTCACCGGCGTCGG
CCCCATCGGCTGCGTGCCCGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCCGAGCTGCAGCGCGCGTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTCAACCAGCTCAACGCCGAGGTCGGCAGCGGGAACGGCAACGGCGCGGTG
TTCGTGGCAGTGAACACGCGCCGCGCGCACGACGACTTCATCGCCGACCCCAAGGCATACGGCTTCGTCACCGCCACCGA
GGCCTGCTGCGGCCAGGGCCGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTCTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCACCGGCTCCACCGAC
TACATCTCCCCCATGAACCTCTCCACCATCCTCCATCTCGACCGCCACCTCCACGACTAGAAGATCGATG----------
-----------GTTCAGCCTCGATCATTTGCAGTTCGATTGCTTATGCTTTTTCGCACA---------TGGCCTTCTTGA
TTTTGTCAAACAAAACGTTAATAATATAGTATTCAGTAAGTACGTGTACGT-TATTTCAGCTAGTGTGTCAGGTTGAG--
-----GTTCTAGCTAGTTTTGTGATACGTGCTCAGCTAGC-TAGCCAGCAGATAAATCCATGGTTACAATCGAGGTACTT
GTGGTGTCATATCCGTGTACGTGTCGTGTATCTAGTACAGCCGGGTGGGTGATAATTGAATCATGGATATCTGGCCCAT-
---GATTGTTCAGTTTTGCTAGTTTCATTGTCTGAATCGATTTTCGGCCCCGCTTGCATATCTGGCCCATGTTTTACACC
TTGTTTGGTTGCCCACAAAACACTGGATGCATTACGGCTAGAGCTGCAAGAAAAACTCGAGACTCGTGAGCCACTCGAAA
TCGACTCGTTTTTTGACTCGACTCGAGATCGACTTGAAAAGAAACAAGTTAAGTTTGAACACTTTATGTAGCTCGACTGA
GAAACGAGCCGATCTTGAGCCAATATTGGCTCCCTCGATTTTAGCTCGATAGCTCGACAGAATATCATTATGTTAAATGA
TCATGCCATATATTAAATGAAAATAAGATGATTTATTACCATATATGTTGTCCATATTTTATCTCCATTTTATTTATCAA
CGAATATGGAGACTTAATTAAGTGCAGAGAAGATTTAGGCCTAATTATGGCACGTGGTCGACTATGTGTTAAATATCCTA
TATTTTTTGCAAAGGTTCCCAGCATATTCACCTTAATTTTTTTGTTTTTCATTCATAGATTTATAATTTTTACCATCTCA
TTTAGCTCGAAACTAGCTCGAGATCGACTCGAGATCGTTACAAGCTGAGCACGAGTCATGTTCTACAGCTCGATCATGAG
CTTCACTTAGTTTGAGCTCGCTCGAATTTTCATATGAGTTGAGCTGAGCCAACTTCAACTCGCTCAAACTCGACTCTTTG
AAGCCCTAATTACGGCAACAAACTAACCTCAAGCGTTTGGTTGCTGCCCGCGTTTTATAATTTTCGACTCAGCTTATGCG
ATGTGCTTTGTTTGGTTG----CCTTGTGTCTGATGTGATTACCTTGCACCCCGATGTGGTGAGCTTACCAGCTAGCACT
CAAATCAATGCTTTTACTGCATGTTACAACACAACAAAACTACAATAAATTGGACGAAAAT-ATGAAGTTCTTCAGCTCA
CTTAACCCGATCTGACATGCACCCTTGCCTTTCATGATTGCTCTTCTCTTAGAGCACAAACTTGTACTACTAATCCTCTC
TCTCCTCTCTAGTCACAAATCCTCTATAGGAACTATTCTTGTAACCGTTCATCTCTTCATGGCATGT-------------
--------------------CTAAGTACATGACATCCACTTCATCTACCAAGACAGAAGAGCAAGATTTCAACAAGCAAT
ATTAGCAACACATAACACAACATATGGAATAGAAGCAACATAAGGATGCATCACTACCAGGAGAAACCCTATAGATAGAC
GCTTAACAACAACGCTGGGGAGGGAGCCCGCACTATTGTTACTTAGTAGCAACGTGGGGATTAATACCGCGCTACAAATA
ACCAGTAGTAGCAACGCAGGCTTGCCAATC
>chr6B_718
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-------------------------ATTAGCAGAGAATTGAAGGTCCACGCGCAGGCACTGTGACCAGCAC--AGCAGTA
CGTGCACCAACC-ACACGTCGTACCGGGCCATAGGGGAGTAAATTCCGGCGACGACGACATG----ATCCAACCAAGAGG
CCACTCACTCACTCACTCACTCACTAGATGGATGCACAAGTGAGTA--------GATAGATGCTCTATAAATGGCGACTG
CACGCAACGTTCCAGTGCATCCACC------------AAGTGTACACGCATACACTAGCTACCACATCTCACTTTCAGTG
GCAAGTGAGTGAGTGAAGTGGAGTGTGGAGCGCTAGCAGCAATGGCGGCCTCCTCGTGGCAAGTGGCGGCTCTTCTCGCC
GTCGCGCTCTGCGTGCTCCC---CGCGCTGCCGGCAGCGCGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCCTCACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACGGGGAGGTTCTCCAACGGGAAGAACGTCGTCGACCTCATCAGTTGAGTAGCGAGCTCGTGCATTCATGGATGG
ACTTCACTC---------------TTCACCCGCCGTCGGTGG--------TATCTATAGTTGA-GGCTAACTGGTTGATT
GATTAACATTTAACAATGTTGCACGCAGGCGAGCAGATAGGATCCGTGCCGGTGCTGCCGTACCTGAGCCCGGAGCTGGA
CGGCGAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATCGGGATCCTCAACGACACCGGCATCCAGTTCGTAC
GTGCTT-CGATCCTTT-CACTGATCCATCCACCGTTTTCAATGCACACTTCATTCAATAATTAACTCTAGTGTACACACT
CTCTAATGAGTAATGAATATCGATGCTCCGTGCATCA------TCG----------------------------------
-------------------------TGCAGGCCAACATCATCCGGATCTCGAAGCAGCTCACCTACTTCGAGCAGTACAA
GCACCGTCTCGCCAAGCTGTACGGCCCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGGTGCCCTACTCCGCCCGCTCCCGGGAGTTCTCCCTCCCCGACTACATCAAG
TACATCCTCTCCGAGTACAAGCAGGTGCTCCGCCGCATCCACGGCCTCGGCGCGCGCCGCATCCTGGTCACCGGCGTCGG
CCCCATCGGCTGCGTGCCCGCCGAGCTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCGGAGCTGCAGCGCGCGTCCG
AGGCCTACAACCCGCAGATGGAGGCCATGCTGAACGAGCTCAACGCCGAGGTCGGCGCCGGCAACGGCAACGGCGCCGTG
TTCGTGGCCGTCAACACGCGCCGCTCGCACGACGACTTCATCGCCGACCCCAAGGCGTACGGCTTCGTCACCGCCACCGA
GGCGTGCTGCGGCCAGGGGCGGTTCAACGGCATCGGCATCTGCACCATGGTGTCCAGCCTGTGCGCCAACCGCGACGAGT
ACGTGTTCTGGGACGCCTTCCACCCGACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTCTCGGGCTCCACCGAC
TACATCTCCCCCATGAACCTCTCCACCATCATCCACCTCGACCGCCACCTCCACGACTAGCTACAAGCACATTGATCCAC
CATGATGCTTCGTTCAGCCTCGACCATTTGCAGTCCTATTTCTTTCTTTGATGCTTTTCATATATAGCCGGCCCTCTTGA
TTTTGCCCAAGAAAAAGTTTATATTATA---TTCGGTACGTATATGTACGTGTATTTCAGCTAGTGTGTCAGGCAGGTTG
AGGTTGTTCTAGCTAGTTT-GTAATGCGTGATCAGCTAGC-TAGCAGATAAATATATCCATG------------------
--------------------------------------------------------------------------------
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>chr5A_718
--------------------------------------------------------------------------------
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-------------------------ATTACCGGAGAATTAAAGGTCCACGCGCAGGCACTGTGACCAGCAC--AGCA---
-GTGCACCAACC-ACACGTCGTACCGGGCCACGC-GGAGTAAATTCCGGCGACGACGACATG----ATCCAAGCAAGAGG
C----CACTCACTCACTCACTAGCTAGATGGATGCACAAGTGCCTACCTAGACGGATAGATGCTCTATAAATGGCGACTG
CACGCAACGTTTCAGTGCATCCACC------------AAGTGTACACGCATACACTAGCTACTACGTCTCACTTTCAGTG
GCAACTGGCAAGT-------GAGTGTGGAGCGATAGCAGCAATGGCGGCCTCCTCGTGGCAAGT---GGCCCTTCTCGCC
GTCGCGGTCTGCGTGCTCCC---GGCCCTGCCGGCGGCGGGCGCGGCCCGGGCCTTCTTCATCTTCGGCGACTCGCTGGT
GGACAACGGCAACAACAACTACCTCATGACGTCGGCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACC
GCGCCACGGGGAGGTTCTCCAATGGCAAGAACGTCGTCGACCTCATCAGTTGAGTAGCAAGCTCGTGCATTCATGGATG-
------CTC---------------TTCACCAGCCGTCGGTGG--------TATTTAGAGGGCTTGGCTAACTAATGA--T
TGA------TTAACAATGTTGCACGCAGGCGAGCAGATAGGATCCGTGCCGGTGCTGCCGTATCTTAGCCCCGAGCTGGA
CGGCGAGAACCTGCTCGTCGGCGCCAACTTCGCCTCCGCCGGCATTGGAATCCTCAACGACACCGGCATCCAGTTCGT--
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>chr5D_1359
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----------------------------GCGAGCACCTCGGGGCCGAGCCCGTGCTGCCCTACCTCAGCCCCCACCTCGA
CGGCCACAAGCTGCTCGGCGGCGCCAACTTCGCGTCCGCCGGCGTCGGCATCCTCAACGACACCGGCATCCAGTTTGTAA
GCTCAG------------------------------------------------------------CTACTTCGCACCTC
TTGTACTAC---------GTG--------------CC------TCAAATTGCAAATACAAGGAACGAACGAACGAACGAA
TGCGTTGCATATTTGGCTTCGGCCCTGCAGGTGAACATCATCCGCATACAGAAGCAGCTGCGCTACTTCGAGCAGTACCA
AAGCAGGGTGCGGCGGCTGATCGGCGAGCCGGCGACGCAGCGGCTGGTGCGGAGCGCGCTGGTGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGCTGCCCTTCTCCGCCAGGTCCCGCCAGTTCGCGCTCCCGGACTACATCCGC
TACCTCATCGCCGAGTACAAGACCATCCTCCAGCAGCTCCACGGCCTCGGCGCCCGCCGCGTCCTCGTCACCGGCTCCGG
GCCCATCGGCTGCGCGCCGGCGGAGCTCGCCACGCGGAGCGCCAACGGCGAGTGCGACCTGGAGCTGCAGCGCGCCGCCG
CGCTCTACAACCCGCAGCTGGTGCAGATGACCAAGGACCTCAACGCTCAGTTCGGCGCCGA---------------CGTG
TTCGTCGCCGTCAACGCCTACCGGATGCACATGGACTTCATCTCCGCCCCGGCGGCGTACGGCTTCGTCACGTCCAAGGT
GGCGTGCTGCGGCCAGGGCCCGTACAACGGCGTGGGGCTGTGCACCGCCATGTCCAGCGTCTGCCCCGACCGCTCCCTCT
ACGCCTTCTGGGACAACTTCCACCCCACCGAGAGGGCCAACCGCATCATCGTCAGCCAGTTCATGGCCGGCTCCCCGGAC
TACATGCACCCACTCAACCTCTCCACCATCCTC-----------------------------------------------
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------------------------------
>chr5A_1595
--------------------------------------------------------------------------------
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-------------------------TGCAGGTGAACATCATCCGTATCCAGAAGCAGCTGCGCTACTTCGAGCAGTACCA
GAGCAGGGTGCGGCGGCTGATCGGCGAGCCTGCGACGCAGCGGCTGGTGCGGAGCGCGCTGGTGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGCTGCCCTTCTCCGCCAGGTCCCGCCAGTTCGCGCTCCCGGACTACGTCCGC
TACCTCATCGCCGAGTACAAGACCATCCTCCAGCAGCTCCACGGCCTGGGCGCCCGCCGCGTCCTCGTCACCGGCTCGGG
CCCGATCGGCTGCGCGCCGGCGGAGCTCGCCACGCGGAGCGCCAACGGCGAGTGCGACCTGGAGCTGCAGCGCGCCGCCG
CGCTCTACAACCCGCAGCTGGTGCAGATGACCAAGGACCTCAACGCGCAGTTCGGCGCCGA---------------CGTG
TTCGTCGCCGTCAACGCCTACCGGATGCACATGGACTTCATCTCCGCCCCGGCGGCGTACGGCTTCGTCACGTCCAAGGT
GGCGTGCTGCGGCCAGGGCCCGTACAACGGCGTGGGGCTGTGCACCGCCATGTCCAGCGTCTGCCCCGACCGCTCCCTCT
TCGCCTTCTGGGACAACTTCCACCCCACCGAGAGGGCTAACCGCATCATCGTCAGCCAGTTCATGGCCGGCTCCCCGGAC
TACATGCACCCGCTCAACCTCTCCACCATCCTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------
>chr5B_1595
--------------------------------------------------------------------------------
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-------------------------TGCAGGTGAACATCATCCGTATACAGAAGCAGCTGCGCTACTTCGAGCAGTACCA
GAGCAGGGTGCAGCGGCTGATCGGCGGGCCGGCGACGCAGCGGCTGGTGTGGAGCGCGCTGGTGCTCATCACGCTCGGCG
GCAACGACTTCGTCAACAACTACTACCTGCTGCCCTTCTCCGCCAGGTCCCGCCAGTTCGCGCTCCCGGACTACGTCCGC
TACCTCATCGCCGAGTACAAGACCATCCTCCAGCAGCTCCACGGCCTCGGCGCCCGCCGCGTCCTCGTCACCGGCTCGGG
CCCCATCGGCTGCGCGCCGGCGGAGCTCGCCACGCGTAGCGCCAACGGCGAGTGCGACCTGGAGCTGCAGCGCGCCGCCG
CGCTCTACAACCCGCAGCTGGTGCAGATGACCAAGGACCTCAACGCTCAGTTCGGCGCCGA---------------CGTG
TTCGTCGCCGTCAACGCCTACCGGATGCACATGGACTTCATCTCCGCCCCGGCGGCGTACGGCTTCGTCACGTCCAAGGT
GGCGTGCTGCGGCCAGGGCCCGTACAACGGCGTGGGGCTGTGCACCGCCATGTCCAGCGTCTGCCCGGACCGCTCCCTCT
ACGCCTTCTGGGACAACTTCCACCCCACCGAGAGGGCCAACCGCATCATCGTCAGCCAGTTCATGGCCGGCTCCCCGGAC
TACATGCACCCACTCAACCTCTCCACCATCCTC-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
>SNPs
SSSSSSSSSS--------S--------S----S----------------------------------S------------
------S-------SSSSSSSS------------S-------------------S------S-S-------S--------
------------------S---------S---------------------------------------------------
-----------------------------------------S-------------------------------------S
-----------------------------S-----------------S------------------------------S-
---------------------------S----------------------------------------------------
-----S-----------S--------------------------------------------------------------
-----------------------S------------S-------------------------------------------
----------------------S---------------------------------------------------------
-----------------------SS-------------------------------------------------------
-------------------------------------------------------------------------S------
-------------------------------------------SSSSSSSSSS-SS------------------S-----
--------------------------------------------------------------S------S---S------
----------------------------------------------S---------------------------------
--S-----------------SSS---------------------------------------------------------
--------------------------------------------------------------------------------
-------S---S-S--------------------------------------------------S-----S-------S-
---------SSSSSSSSSSSSSSS------------SS---SSSSS---------------S---S-S------------
--------------S--------------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------S------------SS-SSS---------------------------------------------
-------------------------------------SSSSSS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------S---------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------SS---S--S--S------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------------------------S--------------------------S------------
--------------------------------------------------------------S-------SSSSSSS--S
SSS-----------S-S---------------------------S------S--------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S---------------SSSS-----------------------------------------------------S----
----------------------------------------S--------S-----------S------------------
--------S------------------------------------------------S----------------------
S----------------------------S---------------------S--S---------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS----------------------------------------------------S------S
-------------------------------------------------S-----------SS-----------------
S-----------S------S---SSS----------------------------S-------------SS----------
--S----------S--S-------------
>forward_584
--------------------------------------------------------------------------------
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----CTCAAGCGCCCAAATCGTTG--------------------------------------------------------
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------------------------------
>reverse_2228
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TAATGGAGCGGTG
TTCGTGG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>forward_2027
--------------------------------------------------------------------------------
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-------TGTCCGAGTACAAGCAGGTT-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_3998
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ACC
ATAGATTCCCGGAGTCCT--------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
