>input_sequence_53887
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----------------------------------------------------------ATGATGATGAGGTCTCTAGAGC
CGGCGGCCGAGCACAAGGCCTCGTCATCCTTCGGCAACCTCCTCTCCATCTTCCTCCGGGTCAGCTCCTCCGAGCCCAAG
CCACCGAGGCGGAGCTTCGACGCCGAGGGCGTCGTCGGGCTCGGCATCGTCGCGGCCATGAGCCGTGCGTGCCTCACCGC
CCAGCCAATAGCGATCGGCGCTGCCGCGCGCCGCCGCGCGCACGAGGAGGACGAGCTCTCGGAGAGCTACACGTGCGTCA
TCACGCACATGGCCACCGGCGCCGGCGAGGGCGGCAGCATGCGCAAGCGCGTGTACTTCGGGTTCGGCGACGGCGGGGAC
GGCTGGTTCGTGGAAGCCGCTGAGGAGGCGCCCGCGAGGGCAGACGACTTCTTGAGCCGGTGCTGCCTCTGCAACAAGAG
GCTTGATGGGCTCGACATCTACATGTACAGGTGAGTGGTTAACCAACCAACAACTGACG---AGTAGTACTTCATATCGC
AAGGAGTTAATAACTGATGCCATACTGAAACAAATAAGCTACAAGACGCATATAATCCTTCAGGAATCTCACATGATCAT
AGTATCAATTTG--TGGAATACATTCCTACCATTTTTTTATCTAAGAAGTTTGTGAGAATTTTAGCTAGCTACCATCCTT
TAGGAATCTCCTTTCCTGGTTTTTATTTTGGCTGTGTGGACAGTGAGCCTTCATGTCTGTTGGACCAAGCAAAGCTTGAT
GTACATCACATCTTA-----------------------------------------------------------------
-----------------------------------------------------------------ATTTCTTGTTTTATT
TAGGTGGGAATTCTTTTCACCTTCCTTTCTCAGAGAACAATTAGGGGTAGGTCTACAGCTGAAATTAAGAGATATCAAAT
GTGCTTATGAGTTCAAAGTAGCAATAACCACTCTTTGGCCCTGTAACCATTCATTAGCCCTTCGGTTGAAGGATGCCATG
ATTATGTATTCCGGGAGCACAGCCAAGTTCAGCTATCCTT-AAGAAAGCAGAAGACAGATAAGTTGTGATAGGTGTAGAA
TTTTATC---------TTCACCTTAATAAGTAGTATCACTCATCCCAGCATAGCACCTCGCATAAATATCTTTTGAAATG
GCAAGCATAGC-----TCCTGGTGAATTCAGTCTATAATAC-TTTCAGAGTTTAGTGACAAGGAACAGTACACTAACCAC
TCCATTACCTCTCTTCTGCTCTTGACCTGCAACTGCAGGGGGGAGAAAGCCTTCTGCAGCTCCGAGTGCCGATGCCACCA
GATGCTCATGGACGACCGCGCAGAAAACTGCGGATCAGAAGCCCTCAGAGCCAACAGCTACTCGGCCTCGCCGTGCTCCG
CGCCGATGTCCTTCTCTCCCAGCGTCGCGGCGGCCTAG------------------------------------------
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>chr6B_1_TraesCS6B01G182700
CCAATAGCAGGTTTTCACCCGGATATGATCGAAGACCTCCATCTCTCGTGCACGGGTCGCCGCCATCCTTGCCGGGATCT
GGAAGATCCCGCAAGCCAGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------------
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---------------------------------------------------------CGGATCTGGCCCGCGCCTGACCA
CCCGCGCGAGGGGACGAAGGAGGCCCCGCCGCCGCCTGCGCAGACCGGGCTTCGCCCGGCCACGCCCTCCAGCGGCGGCG
AGGGGGAGTAGGGAGGGAGAGGGGGCCGAGCGGAGGAGATCGGGGCGCCCTCCCCGGCCGCCTCGCGGGTGGCGGCGCAG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCTCCTAATATGGCGGCCACTATTTTATTTTATGTGGCAATATTTAATTC
TCAGAAGCAAATAAAAAGGACAATTTCTTGATTCTCTTTGGAAAATTAATATTGTTATGGAATATTCTCCAATTATTATG
AGAAAAAAACATCGGGGCACCAAGTGAAGAGGTTCTGCATGTGCAGCCCCCACTGGTTAGTAGGAAAACTACCCTACTAC
AACAACAAATCATTTTCCCTTTAAAATGCCTCCCACCACCAGCACCATCTTCTCTCTCCCTCCTCCCCTCACTTCCATTA
GCTAGTATTCAGGTTAACTAGGAGGGAAGAGGAGAGGAGAGGAGGGAGTGTGGAGAAGATGATGATGAGGTCTCTAGAGC
CGGCGGCCGAGCACAAGGCCTCGTCATCCTTCGGCAACCTCCTCTCCATCTTCCTCCGGGTCAGCTCCTCCGAGCCCAAG
CCACCGAGGCGGAGCTTCGACGCCGAGGGCGTCGTCGGGCTCGGCATCGTCGCGGCCATGAGCCGTGCGTGCCTCACCGC
CCAGCCAATAGCGATCGGCGCTGCCGCGCGCCGCCGCGCGCACGAGGAGGACGAGCTCTCGGAGAGCTACACGTGCGTCA
TCACGCACATGGCCACCGGCGCCGGCGAGGGCGGCAGCATGCGCAAGCGCGTGTACTTCGGGTTCGGCGACGGCGGGGAC
GGCTGGTTCGTGGAAGCCGCTGAGGAGGCGCCCGCGAGGGCAGACGACTTCTTGAGCCGGTGCTGCCTCTGCAACAAGAG
GCTTGATGGGCTCGACATCTACATGTACAGGTGAGTGGTTAACCAACCAACAACTGACG---AGTAGTACTTCATATCGC
AAGGAGTTAATAACTGATGCCATACTGAAACAAATAAGCTACAAGACGCATATAATCCTTCAGGAATCTCACATGATCAT
AGTATCAATTTG--TGGAATACATTCCTACCATTTTTTTATCTAAGAAGTTTGTGAGAATTTTAGCTAGCTACCATCCTT
TAGGAATCTCCTTTCCTGGTTTTTATTTTGGCTGTGTGGACAGTGAGCCTTCATGTCTGTTGGACCAAGCAAAGCTTGAT
GTACATCACATCTTA-----------------------------------------------------------------
-----------------------------------------------------------------ATTTCTTGTTTTATT
TAGGTGGGAATTCTTTTCACCTTCCTTTCTCAGAGAACAATTAGGGGTAGGTCTACAGCTGAAATTAAGAGATATCAAAT
GTGCTTATGAGTTCAAAGTAGCAATAACCACTCTTTGGCCCTGTAACCATTCATTAGCCCTTCGGTTGAAGGATGCCATG
ATTATGTATTCCGGGAGCACAGCCAAGTTCAGCTATCCTT-AAGAAAGCAGAAGACAGATAAGTTGTGATAGGTGTAGAA
TTTTATC---------TTCACCTTAATAAGTAGTATCACTCATCCCAGCATAGCACCTCGCATAAATATCTTTTGAAATG
GCAAGCATAGC-----TCCTGGTGAATTCAGTCTATAATAC-TTTCAGAGTTTAGTGACAAGGAACAGTACACTAACCAC
TCCATTACCTCTCTTCTGCTCTTGACCTGCAACTGCAGGGGGGAGAAAGCCTTCTGCAGCTCCGAGTGCCGATGCCACCA
GATGCTCATGGACGACCGCGCAGAAAACTGCGGATCAGAAGCCCTCAGAGCCAACAGCTACTCGGCCTCGCCGTGCTCCG
CGCCGATGTCCTTCTCTCCCAGCGTCGCGGCGGCCTAGCCGGCCGAGCTGCGTGATGCCGTCAAGCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGATCTTTTAAGCGAATGAAAACATAGAGTAATTACT-----AAAAAAAGGTT
TCTGAACTGTGGCTCGAATAAAAGAGAGGAAGAAAGTTTTTGGGG-TCATGTCCACCGCAAGATGTTCGGTTCTTGAGCG
TGATTGCATTTCTCTGTAGCAAGCAGGGGTAATTATGCTAGCACTTA-GCAAAGAAATTTGATGATGCGTCCTATCCTAA
AGTTTCGGGAAGATATCTGCTGCATGTTAAATGCTTAATTGGCCTGGG-TAAAAATATCCATTAATAAACTTCTTCTGAG
GGATATCAGAA----TTTATAGGTGCCATTTCAGTACA-TTCCAGTTCTAAGCTCAGGTAA--ATCACAGCAGAAACATG
GTCTCCTGAGGCAAAATCAAACTCTGGGAGTACATCCGTATGGTCCATGCATGTGCATGCAGATCGCAGGTGCCTAGCCG
AACTCAACTTGGAATCTCCACCGTGCACCCACATTATTGTTCCCGTACCCTGCGCCACCATCATTACCGATGCTCCCTTG
TGGTCACGATTTTCAGTTGGTCACTGGAAGCTTAAAATTCAATCTTGATGGTGTTATTAGGACAAACTGGAAGCTTTTAA
AACTCAATCCTGATGACATTCTCTTGGCACTATTCATCATTCATATACAACCACG-------------------------
-----------------------------------GAGTAGTCTACTGAATGGGTGGAGCAGAGCATGAGCTGCAAAACA
CCATCTCGCCACCTGGTGAACTAGAATTCATTACAATACCATAATACTCCTGTCCAACGTTAACATATCGCTCCACCACT
CCGCGTTTCAACCGCAAGGAAGGCAATTCCCTCTATCAGCAAGCAGAACCCCAGTATTCACAGCGGCAGAGTCTGGCGCG
GACCTGCTTCAGCTGTACCTTGAGCATCATCATTCAAATAATGGGGAGCAAATATCTGAAAGTGCTTAGGATA
>chr6B_1
CCAATAGCAGGTTTTCACCCGGATCTGATCGAAGACCTCCATCTCTCGTGCACGGGTCGCCGCCATCCTTGCCGGGATCT
GGAAGATCCCGCAAGCCAGATCTCAGTAGGGAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCTC
GACCACTCCGCAGCACGCC-------------------------------------------------------------
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----------------GTGCCGCCGCACCCGTCAACCAGTCCGGCGCCCAGGCCCGGCGAATCTGGCCCGCGCCTGACCA
CCCGCGCGAGGGGACGAAGGAGGCCCCGCCGCCGCCTGCGTAGACCGGGCTTCGCCCGGCCACGCCCTCCAGCGGCGGCG
AGGGGGAGTAGGGAGGGAGAGGGGGCCGAGCGGAGGAGATCGGGGCGCCCTCCCCGGCCGCCTCGCGGGTGGCGGCGCGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCGCCTAA-----------------------------------------
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>chr6A_1
CCAATAGCAGGTTTTCACCCGGATCTGATCGAAGACTTCCATCTCTCGTGCACGGGTCGCCGCCATCCTTGCCGGGATCT
GGAAGATCCCGCAAGCCAGATCTCAGTAGGGAGGAGCCCACCCCCCCTCCCCCCCACCGAGACCCGCCGGCCAAGCAGGG
GAGGCCGAGGCCGCGCCCACAGGACATGCCCGCGCCGCCGCCCCGGAGCAGCCCCGCGCGCCAAGAGGCGAGGACCACCA
CCATGACTCCCGCCGCACCGCCGCCA-----------------------------------------------GGAGCTC
GACCACTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGTGCCGCCGCACCCGTCAACCAGTCCGGCGCCCAGGCCCGGCGGATCTGGCC--CGCCTGACCA
CCCGCGCGAGGGGACGAAGGAGGCCCCGCCGCCGCCTGCGCAGACCGGGCTTCGCCCGGCCACGCCCTCCAGCGGCGGCG
AGGGGGAGTAGGGAGGGAGAGGGGGCCGAGCGGAGGAGATCGGGGCGCCCTCCCCGGCCGCCTCGTGGGTGGCGGCGCGG
GAGGGAGGGAGGGGGGGGAGGGGGGGAGAGA-------------------------------------------------
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-------------------------------------------------------------------------
>chr3B_2
-CAATAGCAGGTTTTCACCCGGATCTGATCGAAGACCTCCATCTCTCGTGCACGGGTCGCCGCCATCCTTGCCGGGATCT
GGAAGATCCCGCAAGCCAGATCTCAGTAGGGAGGAGC-------CCCCCCCCCCCACCGAGACCCGCCGGCCAAGCAGGG
GAGGCCGAGGCCGCGCCCACAGGACATGCCCGCGCCGCCGCCCCGGAGCAGCCCCGCGCGCCAAGAGGCGAGGACCACCA
CCATGACTCCCGCCGCACCGCCGCCA-----------------------------------------------GGAGCCC
GACCACTCCGCAGCACGCC-------------------------------------------------------------
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----------------GTGCCGCCGCACCCGTCATCCAGGCCGGTGCCCAGGCCCGGCGGATCTGGCCCGCGCCTGACCA
CCCGCGCGAGGGGACGAAGGAGGCCCCGCCGCCGCCTGCGCAGACCGGGCTTCGCCCGGCCACGCCCTCCAGCGGCGGCG
AGGGGGAGTAGGGAGGGAGAGGGGGCCGAGCGGAGGAGATCGGGGCGCCCTCCCCGGCCGCCTCGCGGGTGGCGGCGCGG
GAGGAAGGGAGGGAGGGAGGG-----------------------------------------------------------
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>chr6A_995
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----------------------------------------------------GAGAAAATGATGACGAGGTCTCTAGAGC
CGGCAGCCGAGCAGAAGGCCTCGTCGTCCTTCGGCAACCTGCTCTCCATCTTCCTCCGGGTCAGCTCGTCCGAGCCCAAG
CCGCCGAGGCGGAGCTTCGACGCCGAGGGCGTTGTCGGGCTCGGCATCGTCGCGGCCATGAGCCGCGCGTGCCTCACCGC
CCAGCCGATAGCGATCGGCGCTGCCGCACGCCGCCGCGCGCGCGAGGAGGACGAACTCTCCGAGAGCTACACGTGCGTCA
TCACGCACGTGGCCGCCGGCGCCGGCGAGGGCGGCAGCATGCGCAAGCGCGTCTACTTCGGGTTCGGCGACGGCGGGGAC
AGCTGGTTCGTGGAGGCCGCTGAGGAGGCGCCGGCGAGGGCGGACGACTTCTTGAGCCGCTGCTGCCTCTGCAACAAGAG
GCTTGATGGGCTCGACATCTACATGTATAGGTGAGTGGTTAACCAACCAACAACTGACGAGTAGTAGTACTTCATATCGC
AAGGAGTTAATAACTGATGCCATACTGAAACAAATAAGCTACAAGATGCATATGATCCTTCAGGAATCTCACATGTTCAT
A---TCAATTTGAATGGAATACATTCCTCCCAATTTTTTTCCTAAGAAGTTTGTGAGAATTTTAGCTAGCTACCATCCTT
TAGGAATCTCCTTTCCTTGTTTTAATTTTGGTTGTGTGGACAGTGAGCCTTCATGTCTGTTGGACCAAGCAAAGCTTGAT
GTACATCACATCTTA-----------------------------------------------------------------
-----------------------------------------------------------------ATTTCTTGTTTTATT
TAGGTGGGAATATTTTTCACCTTCCTTTCTCAGAGAACAATTAGGGGTAGGTCTACAGCTGAAA----------------
----TTATGAGTTCAAAGTAGCAATAACCACTCTTTGGCCCTGTAGCCATTCATTAGCCCTTCGGTTGAAGGATGCCATG
ATTATGTATTCCTGGAGCACAGCCTAGTTCAGCTATCCTTTAAGAAAGCAGAAGACAGATAAGTTGTGATAGGTGCAGAA
TTTTATCTTAAAACATTTCACCTTAATAAGTAGTATCACTCATCTCAGCATAGCACCTCGCATAAACATCTTTTTAAATG
GCAAGCAAAGCATGGCTCCTGGTGAATTCAGTCTATAATAC-TTTCAGAGTTTAGTGACAAGGAACAGTACACTAACCAC
TTGATTACCTCTCTTCTTCTCTTGACCTGCAACTCTAGGGGGGAGAAAGCCTTCTGCAGCTCCGAGTGCCGATGCCACCA
GATGCTCATGGACGACCACGCAGAAAAATGTGGATCAGAAGCCCTCAGAGCCAGCAGCTACTCGGCCTCCCCGTGCTCCG
CGCCGATGTCCTTCTCCCCCAGCGTCGCCGCGGCCTAGCCGACCGAGCTGCGTGATGCCGTCGAGCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGATCTTTTAAGCGAATGAAAACATAGAGTAATTACT----AAAAAAAAGGTT
TCTGAACTGTGGCTCGAATAAAAGAGAGGAAGAAAG-TTTTTGGGGTCATGTCCACCGCGAAATGTTCAGTGCTTGAGCG
TGATTGCATTTCTCTGTACCAAGCAGGGATAATTATGCTAGCACTTA-GAAAAGAAATACCATGTCGCGTCCTATCCTGA
AGTTGCATGAAGAGATTTGCTGCATGTTAAACGCTTGATTGGCCT-GG-TAAAAATATCAATTAACAAACTTCTTCTGAG
GGATGACAGAATTTGTTTATAGGTGGCATTTC---ACA-TTCCAGTTCTGAACTCAGGTAAAAATCACAGCAGAAACATG
GTCTCCTGAGGCAAAATCAAACTATGGTGGTACATCCGTATGGCCCATGCATGTGCATGCAGATCGCAGGTGCCTAGCCG
AACTCAACTTGGAATCTCCACCGTGCACCCACATTATTGTTCCCGTACCCTGCGCCACCATCATTACCGATGTTCCCTTG
TGGTCACGATTTTCAGTTGGTCACTGGAAGCTTAAAATTCAATCTTGATGGTGTTATTAGGACACACTGGAAGC--TTAA
AACTCAACCCTGATGACATTCTCTTGGCACTATTCA---TTCATATACACAGCAACCTTGGCGAAATTCGCAAAAAGAAA
AATACTGACCTGGGAGAAAACGAGCCCACAGCCACGAGTAGTCTACTGAATGGGAGGGGCATAAACTGCTGAACATCAT-
----------------------------------------------------------------------CTCCACCACT
CCGCGTTTCAACCACAAGGAAGGCAATTCCCTCTATCAGCAAGCAGAACCCCAGTATTCACGGCGGCAGAGTCTGGCACG
GACCTGCTTCAGCTGTACCGTGAGCATCATCATTCAAATAATGGAGAGCAAATATCTGAAAGTGCT-------
>chr6D_995
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----------------------------------------------------GAGAAAATGATGACGAGGTCTCCAGAGC
CGGCAGCCGAGCAGAAGGCCTCGTCGTCCTTCGGCAACCTGCTCTCCATCTTCCTCCGGGTCAGCTCGTCCGAGACCAAG
CCGCCGAGGCGGAGCTTCGACGCCGAGGGCGTCGTCGGGCTCGGCATCGTCGCGGCCATGAGCCGCGCGTGCCTCACCGC
CCAGCCGATAGCGATCGGCGCTGCCGCACGCCGCCGCGGGCGCGAGGAGGACGAGCTCTCGGAGAGCTACACGTGCGTCA
TCACGCACATGGCCGCCGGCGCCGACGAGGGCGGCAGCATGCGCAAGCGCGTCTACTTCGGGTTCGGCGACGGCGGGGAC
GGCTGGTTCGTGGAAGCCGCTGAGGAGGCGCCGGCGAGGGCGGACGACTTCTTGAGCCGATGCTGCCTCTGCAACAAGAG
GCTTGATGGGCTCGACATCTACATGTATAGGTGAGTGGTTAACCAACCAACAACTGACGAGC---AGTACTTCATATCGC
AGGGAGTTAATAACTGATGCCATACTGAAACAAATAAGCTACAAGATGCATATAATCCTTCAGGAATCTCACATGATCAT
AGTATCAATTTGAATGGAATACATTCCTACC-ATTTTTTTCCTAAGAAGTTTGTGAGAATTTTAGCTAGCCACCATCCTT
TAGGGATCTCCTTTCCTTGTTTTTATTTTGGTTGTGTGGACAGTGAGCCTTCATGTCTGTTGGACCAAGCAAAGCTTGAT
GTACATCACATCTTAGGTCCTGTTCGGAGACCCGCCACTCCACCACTCCGCTCCCGGAGTTGGAGTCAAAAGGCACGGAG
CTGGGAAAGAGATGCTCCAGCTCCTCGTATTTTTAGGAGTTGGAGTGACTCCAAACAGGGCCTTAATTTCTTGTTTTATT
TAGGTGGGATTTTTTTTCACCTTCCTTTCTCAGAGAACAATTAGGGGTAGGTCTACAGCTGATATTAAGAGATATCAAAT
GTGCTTATGAGTTCAAAGTAGCAATAACCACTCTTTGGCCCTGTAGCCATTCATTAGCCCTTCGGTTGAAGGATGCCATG
ATTATGTATTCCTGGAGCAGAGCCTAGTTCAGCTATCCTT-AGGAAAGCAGAAGACAGATAAGTTGTCATAGGTGTAGAA
TTTTATCT---AACATTTCACCTTAATAAGTAGTATCACTCATCCCAGCATAGCACATCGCATAAACATCTTTTTAAATG
GCAAGCAAAGCATGGCTCCTGGTGAATTCAGTCTATAGTAC-TTTCAGAGTTTAGTGACAAGGAACAGTACACTAACCAC
ACGCTTACCTCTCTTCTGCTCTTGACCTGCAACTGCAGGGGGGAGAAAGCCTTCTGCAGCTCCGAGTGCCGATGCCACCA
GATGCTCATGGACGACCACGCTGAAAAGTGCGGATCAGAAGCCCTCAGAGCCAGCAGCTACTCGGCCTCGCCGTGCTCTG
CGCCGATGTCCTTCTCCCCAAGCGTCGCGGCGGCCTAGCCGACCGAGCTGCGTGATGCCATCAAGCTGATCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGATCTTTTAAGCGAATGAAAGCATAGAGTAATTACT----AAAAAAAAGGTT
TCTGAACTGTGGGTCGAATAAAAGAGAGGGAGAAAG-TTTTGGGG-TCATGTCCACTGCAAGATGTTCACTGCTTGAGCG
TGATTGCATTTCTCTGTACCGAGCAGGGGTAACTATGCTAGCACTTAAGCTAAGAAATTTGATGTCGCGTCCTATCCTGA
AGTTTCGGGAAGAGATTTGCTGCATGTTAAACGCTTAATTGGCCT-GGGTAAAAATATCCATTAACAAACTTCTTCTGAG
GGATAGCAGAA----TTTATAGGTGGCATTTCAGTACATTTCCAGTTCTAAACTAAGGTAA--ATCACAGCAGAAACATG
GTCTCCTGAGGCAAAATCAAACTCTGGTGGTACATCCGTATGGTCCATGCATGTGCATGCAGATCGCAGGTGCCTAGCCG
AACTCAACTTGGAATCTCCACCGTGCACCCACATTATTGTTCCGGTACCCTGCGCCACCATCATTACC-ATGTTCCCTTG
TGGTCACGATCTTCAGTTGGTCACTGGAAGCTTAAAATTCAATCTTGACGGTGTTATTAGGACACACTGGAAGC--TTAA
AACTCAATCCTAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCAACGTTAACATATCGCTCCACCACT
CCGCGTTTCAACCGCAAGGAAGGCAATTCCCTCTATCAGCAAGCAGAACCCCAGTATTCACAGCGGCAGAGTCTGGCCCG
GACCTGCTTCAGCTGTACCTTGAGCATCATCATTCAAATAATGGAGAGCAAATATCTGAAAGTGCT-------
>chr6D_2046
CATGC---------------------------------------------------------------------------
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------------------------------------------------------AGCTCACATAAACATCTTTTTAAATG
GCAAGCATAGC-----TCGTGGTAGATGTACTCAATAATATTTTTCAGA---TTGTGACAAGCAACAGTG-ATTGATCAC
CAGATTACCTTCCTTTCGCTCTTGAACTCCAACTGTAGTGGGGAGAAAGCCTTATGCAGCT--GAGTGCTAATGTCACCA
GATGCTGATGGATGATAATGCGGAGAACTGTGGATCAGAAGTCCTCAGATCCAACAAGTACTCAGCTTTGCCATGCTCTG
CACCGATGTCCTTCTCCCACAGCGTCGCGACGGCCTAGTCGACCGAGCAGCGTAAAGCTGTCAAGCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGGTCTTTTAAGCGAATGAAATA-------------TGTAAAAAAAAAAAGTT
ACTCAACTGTGCCTCAAATAAAAGAGAGGGAGAAAG-TTTTGGGG-TCATGTCCATTGCAACATATTTAGTGCTTGATTG
CGATTGCATTTCTCTGTA--------------------------------------------------------------
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>chr1B_2046
CATGC---------------------------------------------------------------------------
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------------------------------------------------------AGCTCACATAAACATCTTTTTAAATG
GCAAGCATAGC-----TCGTGGTAGATGTACCCAATAATATTTTTCAGAGTTTTGTGACAAGCAACAGTG-ATTGATCAC
CAGATTACCTTCCTTTCGCTCTTGAACGCCAACTGTAGTGGGGAGAAAGCCTTATGCAGCT--GAGTGCTAATGTCACCA
T-TGTTGATGGATGATAATGTAGAGAACTGTGGATCAGAAGCCCTCAGATCCAACAAGTACTCAGCTTTGCCATGCTCTG
CACCGATGTCCTTCTTCCACAGCATCGCGGCGGCCTAGTCGACGGAGCTGCGTAAAGCTGTCAAGCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGGTCTTTTAAGCGAATGAAATA-------------TGTATTTTTTT----TT
ACTAAACAGTGCCTGAAATAAAAGAGAGGGAGAAAG-TTTTGGGG-TTATGTTCATTGCAACATATTCAGTGCTTGAGTG
CAATTGCATTTCTCTGTACCA-----------------------------------------------------------
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>chr7A_2051
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-----------------------------------------------------CAGCTCACATAAACATCTTTTTAAATG
GCAAGCATAGC-----TCATGGTAGATGTACTCAATAATATTTTTCAGAGTTTTGTGACAAGCAACAGTG-ATTGATCAC
CAG-TTACCTTCCTTTCGATCTTGAACTCTAACTGTAGTGGGGAGAAAGCCTTATGCAGCT--GAATGCTAATTTCACCA
GATGTTGATGGATGATAATGCGGAGAACTATGGATCAGAAGCCCTCAGATCCAACAAGTACTCAGCTTTGCCATGCTCTA
CACCGATATCCTTCTCCCACAACGTCGTGGCAGCCTAGTCGACCAAGCTGCGTAAAGCTGTCAACCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGGTCTTTTAAGCGAATGAAATA-------------T----ATAAAAAAAGTT
ACTGAAATGTGCCTCAAATAAAAGAGGGG--GAAAG-TTTTGAGG-TCATGTCCATTGCAACATATTCAGTGCTTGAGTG
CGATTGCCTTTCTCTGCACCGAGTGGAGATAATTATT-----ACTTA-GTAGAGAAATTTGAT-----------------
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>chr7A_2051
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-----------------------------------------------------CAGCTCACATAAACATCTTTTTCAATG
GCAAGCATAGC-----TCATGGTAGATGTACTCAATAATAGATTACAGAGTTTTGTGACAAGAAACAGTG-ATTGATCAC
CAGATTACCTTCCTTTCGATCTTGAACTCTAACTGTAGTGGGGAGAAAGCCTTATGCAGCT--GAGTGCTAATTTCACCA
GATGTTGATGGATGATAATGCGGAGAACTGTGGATCAGAAGCCCTCAGATCCAACAAGTACTCAGCTTTGCCATGCTCTA
CACCGATATCCTTCTCCCACAGCGTCGCGGCAGCCTAGTCGACCAAGCTGCGTAAAGCTGTCAACCTGCTCCTCAGTTTG
TAGTAGCAGAGAGCATAGAGATCTAAATGGTCTTTTAAGCGAATGAAATA-------------T----ATAAAAAA-GTT
AATGAACTGTGCCCCAAATAAAAGAGGGG--GAAGG-TTTTGAGG-TCATGTCCATTGCAACATATTCAGTGCTTGACTG
CGATTGCCTTTCTCTGCACCGAGTGGAGATAATTATT-----ACTTA-GTAGAGAAATTTGAT-----------------
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>SNPs
------------------------S-------------------------------------------------------
-----------------------SSSSSSSSSSSSS--------------------------------------------
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-------------------------------------------------------------------------SSSSSSS
SSSSSSSSSS----------------------------------------------------------------------
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------------------------------------------------------------------------------S-
-------------------------------SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------S--------------
----S--------S-----------S--------------S--------------------------S------------
--S--------------------------------------------------------------S--------------
------S--------------------S-------------S--------------------------------------
--------------S-------------------------------------S---------------------------
--------------------------------S--------S-----------------S--------------------
---------------------------S----------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------S------SS---------------------------------------
-----------------S-------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
---------------------------------------------S----------------------------------
------------S-----------S-------------------------------------------------------
------------------------------------------------------------------S-------S-----
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
----------------S------------------------S--------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------S--S--------
------------------S---------------------------------------------SS------------S-
-------------S--S--------------S-------------S-------------------S--------------
-----S-------------------S-------------------------S----------------------------
---------------------------SS---------------------------------------------------
------------------------------------------------------------------------S-------
----------------------------------------------------------------S---------SS----
------------------------------------SSS----------SSSSSS-------------------------
------------------------------------------------------S--S---S-SSS--SSSSS--SS-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------S---------------------SSSSSSS
>forward_1253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CACCACCAGCACCATCTTCT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3029
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GGTTCTTGAGCG
TGATTGCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
