>input_sequence_53817
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-----------------------------------------ATGCCGAGATCCAGGTGCGTGCGGTGCCCACTTCCTTCC
CTCCAATGTCCGGTGTCGGTTTCGCTCCTTGCTCAGCCATGCACGCCGTTGGTGCGCATTTAATCTCCCAGGGGGTCCGA
GCTGCCGCAGCGGGCGTCGCCGCGCGCGCCGCTGCACCTCAAGACCACCGCCTCCTCCGAGGCCAATGGCGCGCACCACC
GCCTCCTCGTCGACCGCAGCAGCCCCAAGGTCGCCGACCGCCACTCGCCCCGCAGCCCGCTGCCCGAGGTACGCTGCTGT
TTCTCAGTTGTTTACGCTCTGCTCTGCCTATGCTCGCCATTTGATCTGGCGACGGCGGCGCCATTTGCAGAAGAAGCGCG
CGGGCACTCGGGTGGCGGAGCTGGAGACCAAGCTGGGGAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGTC
TCCGCGGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAGGCCAAGAAGCACGTCGGCGCCAAGGGGAGCCCCAA
GCCGCCGGCGTCTCCTCCCTCCCCCGCCCCTCTACCGGTCCAAGACGAGAAGAAAACCGAGGAGGTGAAGATCGTTGAAG
AACCGGCGGCCGAGGAAGCGGAGGAGGAGGAG---AGCAGCATAAACTCCCCGGCGACCGATGTGTTCGAGGTCGTCCCG
ACCGAGTCGGGCGACAAGGAGAACCAGAGCGCGCTCGTCGCCGAGGACAGCGAGGAGGTGAGCTGTGGAGACAAGGCGGC
ACTGGCCGATGCCGAGGAGGATGTGGAAGTGGAGGAGACCAAGACCATGATTGAGGAGGACAAGAAGGACTCCGCGGCCG
CCATTGAAGGCGGCGAAAAGGAGAACCCGGAGGTCGTGGAGCTCAAGGCCCAGCTGATTGCCAAGGAGATGGAAGTCGCC
GTGCTCACGGCCGACAATGCGGAGCTCAAGAAGCAGGCCGACGAGGCCGCGGCGGCGGTCAAGAGGGCTGACGAGGAGGC
TGTGGCCAAGGCTTTCCTCATCGAGCAGGAGCTCAAGGAGAACGCGGCGCGGGAGGCCCGGATGGGCGAGCAGCTGAGGG
CGTCCGAGGCCGCGCGCGAGGCGCTGGACGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAGTGGCGCAAGGCGGCC
GAGGCGGCCGCCGCGGTGATCGGCGGGGACGCGCACCTCGTCGGTCACCATGGCCTCGCCGGCAATGGAAGCAACGGGTG
GGGGTCCCCGGCGACGATGCCGGACGACGGCGACGACGAGGGGTTCGGCAGCAAGCGGAAGGGCGCCGGCATCCGGATGC
TCGGCGACCTGTGGAAGAAGAAGGGCAACAAGTGA---------------------------------------------
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-------------------------------
>chr3A_1_TraesCS3A01G294600
AACTAAGTCAAAGCCTGATTGCTTCAAAACTCTTTTTTTTTGCCTC-------AAAAGCGCCGTGAGCATCGCCCCGTCT
GTGTCTGAAATCACTCGCTCGCTCGTCCGTCCGTCCGGAATTCGTCACGTCAAAACCCCCACCAACGCGCTGGCGCTGGT
ACGAGCTCTA---TTGCTCACCAGATGCGTGTCCGTGATACGCGGTGCTGTTTCTCCGTCGGCAGTTTCTCCCAAGCGGC
CAAACAGTCACGGAGGAAGCCATCTCCGTGCC-------ACCGTACCACAAGCAAGGAGCAGCAAGCAGCGAGTGATCAC
CGACGGTCAGATCGCCGGACGAGCGGTGGCTCATCAGTCCCACACGGGACACGCTCGCAGGCCTCCTTTTCGTGCAAGTT
GCCACACGGTGTGGGGGCAGTGGCACGGCCGCGGCTCCACCCTCGCCAAGCTGGTCCTTTCGCCCTCGGCTCGGCGCCAT
GGCG---CTTCGAACACAGTACACCGCAGATGTT-CACGTACACACATACACATTCATCCCTACGAGCAT----------
----CCTGCCACAGGAATCCAAACCCAGTGCTACC--------------------------------------------A
GTAACGTTCCAATCCAT----------CCGCATTAACGCCGGGCCGAGGGTGCGCCACCAACCAGTCGAGGTCGGGGCCT
GCGCTGCGTGCGTCGCGTGGCACCGGCGCTC------GGGCCGGCTGCGTCCCGTTG----CTTGCTCCAGCGATTCTGA
TTTCTCCCGTTCGAATTTGAATCGCCACTGCACCGCACCGGCCCGGTCACCTTTACGGAACCCGGCGCCCCTCT------
-------------------------CCTCCATTTATTAATCCCGTTTTCCACGAG---AGAG-------AGTGGAGTAGT
GGACTGACTCGTGGT---------GACTCCTTTTCTTCCC--CGCGCCGCTGTGCCGCCTGCTCCTCGCCCGCCCGCCTT
TCCACCACC-CCCGTCCCTCTCCCTCGTGCTCCTCTCCTCTTC---------TCCTAGGACGACGCGCTGCAGACGGCGA
GGCTAGCAGCCAGGGGCCGGGCGGGGCAACGGGCGCCGGCCATGCCGAGATCCAGGTGCGTGCGGTGCCCACTTCCTTCC
CTCCAATGTCCGGTGTCGGTTTCGCTCCTTGCTCAGCCATGCACGCCGTTGGTGCGCATTTAATCTCCCAGGGGGTCCGA
GCTGCCGCAGCGGGCGTCGCCGCGCGCGCCGCTGCACCTCAAGACCACCGCCTCCTCCGAGGCCAATGGCGCGCACCACC
GCCTCCTCGTCGACCGCAGCAGCCCCAAGGTCGCCGACCGCCACTCGCCCCGCAGCCCGCTGCCCGAGGTACGCTGCTGT
TTCTCAGTTGTTTACGCTCTGCTCTGCCTATGCTCGCCATTTGATCTGGCGACGGCGGCGCCATTTGCAGAAGAAGCGCG
CGGGCACTCGGGTGGCGGAGCTGGAGACCAAGCTGGGGAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGTC
TCCGCGGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAGGCCAAGAAGCACGTCGGCGCCAAGGGGAGCCCCAA
GCCGCCGGCGTCTCCTCCCTCCCCCGCCCCTCTACCGGTCCAAGACGAGAAGAAAACCGAGGAGGTGAAGATCGTTGAAG
AACCGGCGGCCGAGGAAGCGGAGGAGGAGGAG---AGCAGCATAAACTCCCCGGCGACCGATGTGTTCGAGGTCGTCCCG
ACCGAGTCGGGCGACAAGGAGAACCAGAGCGCGCTCGTCGCCGAGGACAGCGAGGAGGTGAGCTGTGGAGACAAGGCGGC
ACTGGCCGATGCCGAGGAGGATGTGGAAGTGGAGGAGACCAAGACCATGATTGAGGAGGACAAGAAGGACTCCGCGGCCG
CCATTGAAGGCGGCGAAAAGGAGAACCCGGAGGTCGTGGAGCTCAAGGCCCAGCTGATTGCCAAGGAGATGGAAGTCGCC
GTGCTCACGGCCGACAATGCGGAGCTCAAGAAGCAGGCCGACGAGGCCGCGGCGGCGGTCAAGAGGGCTGACGAGGAGGC
TGTGGCCAAGGCTTTCCTCATCGAGCAGGAGCTCAAGGAGAACGCGGCGCGGGAGGCCCGGATGGGCGAGCAGCTGAGGG
CGTCCGAGGCCGCGCGCGAGGCGCTGGACGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAGTGGCGCAAGGCGGCC
GAGGCGGCCGCCGCGGTGATCGGCGGGGACGCGCACCTCGTCGGTCACCATGGCCTCGCCGGCAATGGAAGCAACGGGTG
GGGGTCCCCGGCGACGATGCCGGACGACGGCGACGACGAGGGGTTCGGCAGCAAGCGGAAGGGCGCCGGCATCCGGATGC
TCGGCGACCTGTGGAAGAAGAAGGGCAACAAGTGA---GAAGGCGACGACCAGGCTTGCATATCTGTGTAATGCCCAACG
CTCGTCTCTCTC----GGGTCACAGATCCACAGTTCGCTCGCGACGGCGAGCTAGCTCAGCTCAGCTC-----GCGCTCT
AGCTCCATGCATGCTTGGATCGATGCGCTGATGTTTACTGCATTTTGGTTCGGATTTCGCTTATGTTTGTACGATGATGA
G---ATGATGTTCGTGAGATTAAACTCTGTTTGGTGCTCCCGTCG----------TGAGCTGTATGATGATGATCGATGG
CTTGATGCTGTATTGCTGTTGGCTGCT------------GTTGCCCATTGTAAGATGCAGTTCGGCGTTATCTTGGATTC
TGTTGAAGCTATAACCAGATTGTATGCTTCACGATTTTTTGATGATTATAGGGTCTGCC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TACTTCATGATTGTTGATGATTGTAGCGTCTGCTTACTTAACGACTGCTGATGACGGTTTTGGA----
-------------------------TTTTGGATCCAGTTATTGATGATCGTTTTGGAGTTTTGGATTGAGTTGATGATGA
GAGGATTTTTGGGAGATGCGGCCAAAGATTTGAGCAGCACGCCCAGTCAGTCCCAGGTAATAATTTTTGAAATGGCCCGG
CGTCAAAGGTCTCCCCTCCTGGACCACAGGCTG-------AGGCT---------GAAACCAAAAATAACCCTTTGCAC-T
TTGCAGCGCCACACTGCAAAAGGTGCGAGGCGCTGGGCCACGCACGAAATCTGCGAAAGGCGTACGCGTGGGCCGTGTGG
TACGTGAATGATCGAGCTGCTCAGAGCAAGCGTTGTCGATTAGGACTCGCTACACCACCATTATCCTAGCATTGTCTCAA
AAAAAACCATTATCCTAGCAAATCCAAAAAAAATACACGAAATCGATAGGCTAGGGTCGCTCAGACGCTCGCTTGGCTGG
CAAGCAAATCAATCAGCAATTATCGAATAATAAAGATCTATGATCCGGTGAAGAAAAGCTGGGAGGAGATTAGGAGTCAA
GGATGGTGGGCCGAGCTGGGCTGCCTTTGGG
>chr3B_13
------------GCCTGATTGCTTCAAAACTCTCTCTTTTTTTTTGCCTCGAAAAAAGCGGCGTGAGCATCACCCTGTCC
GATATTACTCG--CTCGCTCGCTCGCTCGTCCGTCCGGAATCCGTCACGTCAAAATCCCGAA----------GCGCTGGT
ACGAGAGCTCTATTTGCTCACCAGATGCGTATCCGTGATGCGCGGTGCTATTTCTCCGTCGGCAGTTTTTCCCAAGCAGC
CAAACAGTCACGGAGGAAGCCACCTCTGTGCCACCGTAGACCGTACCACAAGCAAGGAGCAGCAAGCAGTGAGTGATCAC
CGACGGTCAGATCGTCGGACGAGCGGTGGCCT-----------------------------CCTCTTTTTCGTGCAAGTT
GCCACACGGTGGG--------GGCACGGCCGCGGCTCACCCTCA-CCAAGCTGGTCCTTTCGCCCTCAGCTCGGCGCCAT
GGCACGTCTTTGAACACAGGACAGCGTAGATGCCCCACGTACACGCACATGCATTCATCCCTACTACGACGAACGAACGC
GCGCCCTGCCACATGAACCCAAACCCAGCACAGCAGAGGCCTCCTTTTGTTCTGATTTGTTTTGTTTTTACCCGGTTCTA
GTAACGTTCTAATCCATCCGCGCGCGCCCGCATTAACGCTGGGCCGAGGGTGTGCCACCAACCAGTCGAGGTCGGGGCCT
GCGCTGCGTGCGTCGCCTGGCACCGGCGCTCGCGCTCGGGTCGGCCGCGTCCCGTTG----CT----CCAGCGATTTCGA
TTTCTCCCGTTCAAATTTGAATCGCCACCGCACCGCACCGGCCCGGTCGCCTTTACGGAACCCGGCGCCCCTCT------
-------------------------CCTCCATTTATTAATCCCGTTTTCCACGAG---AGAGCAGAGAGAGTGGAGCGGT
GGACTGACCCGGGGGACGAGGCTCGACTCCTTTTCTCTTTCTCGCGCCGCTGTGCCGCCTGCTTCTTGCCTGCCCGCCTT
TCCACCA-C-CCCGTCCCTCTCCTTCGTGCTCCTCTCCTCTC---------ATCCTAGGACGACGCGCTGCAGACGCCGA
GGCTAGCAGCCAGAGGCCGGGCGGGGCAACGGGCGCCGGCCATGCCGAGATCCAGGTGCGTGCGGTGCCCACTTCCTTT-
---CAATGTCCGGTGTCGGTTTCGTTCCTTGCTGAGCCATGC----CGTTGGTGCGCATTTAATCTCCCAGGGGGTCCGA
GCTGCCGCAGCGGGCGTCGCCGCGCGCGCCGCTGCACCTCAAGACCACGGCCTCCTCCGAGGCCAATGGCGCGCACCACC
GCCTCGTTGTCGACCGGAGCAGCCCCAAGATCGCCGACCGCCACTCGCCGCGCAGCCCGCTGCCCGAGGTACGCTGCTGT
TTCTCAGTTATTTACGCTCTCCTCTGGTTATGCTCGCCATTTGATCTGACGGCGGCGC--CCATTTGCAGAAGAAGCGCG
CGGGGACTCGGGTGGCCGAGCTGGAGACGAAACTGGGGAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGTG
TCCGCGGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAAGCCAAGAAGCACGTCGGCACCAAGGGGAGCCCCAA
GCCGGCGGCGTCTCCTCCCTCCCCCGCTCTTCTAGCGGTCGAAGACGAGAAGAAAACTGAGGAGGTGAAGGTTGTTGAAG
AACCGGCGGCCGAGGA------GGAGCAGGAG---AGCAGCATAAACTCCCCGGCGACCGATGTGTTTGAGGTCGTTCGG
ACCGAGTCGGGCGACAAGGAGAACCAGAGCGCGCTCGTCGCCGATGAGAGCGAAGAGGTGAGTTGTGGAGACAAGGCGGC
ACTGG------CCGAGGAGGATGTGGAAGTGGAGGAGACCAAGACCATGATTGAGGAGGATGGCAAGGACTCCGCG---G
CCATTGGCGGCGGCGAAAAGGAGAGCCCGGAGCTCGTGGAGCTCAAGGCTCAGCTGATGGCCAAGGAGATGGAAGTCGTC
GTCCTCACGTCCGACAATGCCGAGCTCAAGAAGCAGGCCGACGAGGCCGCGGCGGCGGTCAAGAGGGCTGACGAGGAGGC
TGTGGCCAAGGCTTTCCTTATCGAGCAGGAGCTGAAGGAGAACGCGGCGCGGGAGGCCCGGGTGGGCGAGCAGCTGAGGG
CGTCCGAGGCCGCGCGCGAGGCGCTGGACGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAGTGGCGCAAGGCGGCC
GAGGCGGCCGCCGCGGTGATCGGTGGGGACGCCCATCTCGTCGGTCACCACGGCCTTGCCGGCAATGC---CAACGGGTG
GGGGTCCCCGGCCACGATGCCGGACGACGGCGAGGACGAGGGGTTCGGCAGCAAGCGGAAGGGCGCCGGCATCCGGATGC
TCGGCGACCTGTGGAAGAAGAAGGGCAACAAGTGAAGTGAAGGCGACAACCAGAGTGGCATATCTGTAT-ATGCCCAACG
CTCGTCTCTCTTGGATGGATCACAGATTCGCAGT----TCGCGACGGCGAGCTAGCTCAGCTCAGCTCAGCTCGCGCTCT
AGCT-----CATGCTTCCATCAATGCACTGATGTTTACTGCATTTTGGTTCGTATTTCGCTTATGCTTGTATGATGATGA
TGATATGATGTTCGTGAGATTAAACTCTGTTTGGTGCTGCCGTCGTGAACTGTATTGAACCGTATGATGATGATCGATGG
CTGCATGCTGCATT-------GCTGCT------------GCTGCCCATTGTAAGATACAGTTCGGCGTTATCTTGGGTTC
TGTTGAAGCTTTACTAGACCGTTGGCTGTTCTAGGGAATAATTTTGGTAATCTTTTCGTCATGATTTGATGCGTGGAACA
CGAACTGAAATTTCCTGCTGAGCTATTGTAATGCGAACGAGATTTTTGCAAACAGAAAATTTGAAACAACGGCAAAAGAT
TCTTGCAAATATTCTGAAGAATCTGTTATGATTTTCCCAGTAGCCGTACAAATTCTCAATCAGCAGCAGCTCGAACATGA
TAAGATGCTGAATACTTCACGATTGTTGATGATTACGGCGTCTGCTTACTTCACGGTTGTTGATGATGGTTTTGGATTTC
TGGATTCAGTTGATGATGAGAGGATTTTTGGATTCAGTTGTTGATGATGGCTTTGGATTTTTGGATTCAGTTGATGATGA
GAGGATTTTTGGGAGATGCGGCCAAAGATTTGAGCAGCACTCCCAG-----CCCAGGTAATAA-TTTTGAAATGGCCCGG
CGTCAAAGGTCTCC--TCCTGGACCACAGGCTG-------AAATCGTGGAGTTA-AAACCAAAAATAACCCTTTGCAC-T
TTGCAGTGCCAAACTGCAAAAGGTGTGAGGTGCTGGGCCACGCACGAAATCTGCAAAAGACATACGT-------GTGGGG
TCCGTGAATGATCGGGTAGTTCAGAGCAAG---TGTCGATTAAGACTCGCTACACCACGATTACCCTAGCA---------
--------------------------------------------------------------------------------
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-------------------------------
>chr3D_579
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---------------------------CCGCATTAACGCTGGGCTGAGGGTGCGCCACCAACCAGTCGAGGTCGGGGCCT
GCGCTGCGTGCGTCGCGTGGCACCGGCGCTCGCGCTCGGGTCGGCCGCGTCCCGTTGCTTGCT----CCAGCGATTTTGA
TTTCTCCCGTTCAAATTTGAATCGC-----CACCGCACCGGCCCGGTCGCCTTTACGGAACCCGGTGCCCCTCTCACCAT
CTCGTAGCCGCAGCCCGCGGCCGCGCCTCCATTTATTAATCCCGTTTTCCACGAGAGCAGAGCAGAGAGAGTGGAGCGGT
GGACTGACCCGGGGAGGA------GACTCCTTTTCTCTTTCTCGCGCCGCTGTGCCGCGTGCTTCTTGCCTGCCCGCCTT
TCCACCA-CACCCGTCCCTCTCCTTCGTGCTCCTCCCCTCTCCTCTCATCCATCCCAGGACGACGCGCTGCAGACGGCGA
GGC---CAGCCAGAGGCCGGGCGGGGCAACGGGCGCCGGCCATGCCGAGATCCAGGTGCGTGCGGTGCCCACTTCCTTCC
CTCCAATGTCCGGTGTCGGTTTCGCTCCTTGCTGAGCCATGC----CGTTGGTGCGCATTCAATCTCCCAGGGGGTCCGA
GCTGCCGCAGCGGCCGTCGCCGCGCGCGCCGCTGCACCTCAAGACCACGGCCTCCTCCGAGGCCAATGGCGCGCACCACC
GCCTCCTCGTCGACCGGAGCAGCCCCAAGGTCGCCGACCGGCACTCGCCGCGCAGCCCGCTGCCCGAGGTACGCTGCTGT
TTCTGAGTTGTTTACGCTCTGCTCTGGCTATGCTCGCCATTTGATCTGACGACGGCGGCGCCATTTGCAGAAGAAGCGCG
CGGGGACCCGGGTGGCGGAGCTGGAGACCAAGCTGGGGAAGGTGCAGGACGAGCTCAAGAAGCTGCGGGAGCAGCTCGTC
TCCGCGGAGGCCGCCAAGAAGGACGCGCAGGTCGCGCTCGAGGAAGCCAAGAAGCATGTCGGCACCAAGGGGAGCCCCAA
GCCGGCGGCGTCTCCTCCCTCCCCCGCTCCTCTACCGGTCGAAGACGAGAAGAAAACTGAGGAGGTGAAGGTCGTTGAAG
AACCGGCGGCCGAGGA------GGAGGAGGAGGACAGCAGCATAAACTCCCCGGCGACCGATGTGTTTGAGGTCGTCCGG
ACCGAGTCGGGCGACAAGGAGAACCAGAGCGCGCTCGTCGCCGAGGACAGCGAGGAGGTGAGCTGCGGAGACAAGGCGGC
GCTGG------CCGAGGAGGATGTGGAGGTGGAGGAGACCAAGACCATGATTGAGGAGGATAGCAAGGACTCCGCGGCCG
CCATTGGCGCCGGTGAAAAGGAGAACCCGGAGGTCGTGGAGCTCAAGGCCCAGCTGATGGCCAAGGAGATGGAAGTCGCC
GTCCTCACGGCCGACAATGCGGAGCTCAAGAAGCAGGCCGACGAGGCCGCGGCGGCGGTCAAGAGGGCCGACGAGGAGGC
TGTGGCCAAGGCTTTCCTCATCGAACAGGAGCTCAAGGAGAACGCGGCGCGGGAGGCCCGGATGGGCGAGCAGCTGAGGG
CATCCGAGGCCGCGCGCGAGGCGCTGGACGCCGAGATGCGGCGCCTGCGCGTGCAGACCGAGCAGTGGCGCAAGGCGGCC
GAGGCAGCCGCCGCGGTGATCGGCGGGGACGCCCATCTCGTCGGTCACCACGGCCTTGCCGGCAATGG---CAACGGGTG
GGGGTCCCCGGCGACGATGCCGGACGACGGCGACGACGAGGGGTTCGGCAGCAAGCGGAAGGGCGCCGGCATCCGGATGC
TCGGCGACCTGTGGAAGAAGAAGGGCAACAAGTGAAGTGAAGGTGACAACCAGAGTGGCATATCTATAT-ATGCCCAATG
CTCGTCTCTCTC----GGGTCACAGATCCACAGTT----CGCGACTGCGAGCT----------AGCTCAGCTCGCGCTCT
AGCT-----CATGCTTGGATC-ATGCACTGATGTTTACTGCATTTTGGTTCGGATTTCACTTATGTTTGTATGATGATGA
G---ATGATGTTCGTGAGATTAATCTGTGTTTGGTGCCTGCGTCGTGAACTGTGTTGAACTGCATGATGGTGATCGATGG
CTCGATGCTGCATG-------GCTGGACTGTTCGCTGCGGCTGCCCATTGTAAGATACAGTTCGGCGTTATCTTGGATTC
TGTTGAAGCTA--CTGGACTGTTCGCTGTTCTAGGGAGT-ATTTTGGTAATCTTTTGGTCATGATTTGATGCGTGGAACA
GGAACTGAAATTTCCTGCTGAGCTATTCTAATACTAACG-------------------------------------AGAT
TCTTGCAAATATTCTGAAGGATCTGTTATGATTTTCGAAGTAGCCGTACAAATTCTCAATCAGCAGCAGCTCGAACATGA
TAAGATGCTGAACACTTGACGATTGTTGATGATTATAGCGGCTGCTTACTTCACGGTTGTTGATGATGGCTTTGGATTTT
TGGATTCAGTTGGTGATGAGAGGATTTTTGGATTCAGTTGTTGATGATGGCTTTGGAGTTTTGGATTGAGTTGATGATGA
GAGGATTTTTGGGAGATGCGGCCAAAGATTTGAGCAGCACTCCCAGTCG----CAGGTAATAATTTTTGAAATGGCCCGG
CGTCAAAGGTCTCC--TCCTGGACCACACGCTGAGGCTGAAAACCGTGGAGTTAGAAACCAAAAATAACCCTTCGCACTT
TTGCAGTGCCACACTGCAAAAGGTGTGAGGCGCTGGGGCACGCACGAAATCTGCGAAAGACGTCAG-------CGTGGGG
TACGTGAATGATCGAGTTGTTCATAGCAAG---TGTCCATTAGG------------------------------------
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-------------------------------
>SNPs
SSSSSSSSSSSS---------------------S-S-----SSS-S--------------S----------S---S---S
-SSSS-SSSSSSS------------SS--------------S-------------S---S-SSSSSSSSSSS--------
-----SS--S--------------------S--------S---------S------------------S--------S--
----------------------S---S------------------------------------------S----------
--------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------------
-----------S-SSSSSSSS----------------SS--SSSS----------------------S------------
---S------S--------S---S--S-----SS----------S--S-SS-------------S-SS-S----------
-------------S---S----------SS-SS-S---------------------------------------------
---------S-----------------------------S----------------------------------------
----------------------------------------S----S-----------------SSSS---------S---
------------S---------------S-------------------S-------------------------------
----------------------------------------------------------------------------SS--
--------S--S--S---------------------SSSS-----------------------S--S---S---------
-------S---------------S-----------------S--------------------------------------
-------------S------------------------------------------------------------------
---------------------------------S--------SSSS----------------------------------
------------------------------------------------S-------------------------------
----------------S--------------------------------S------------------------------
--------------------------S---------------------S-------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------S------------------S----------------
----S----------------------S------------S----------------S------------S---------
----------------SSSSSS---------------------------------------------S----------S-
--------------------------------------------------------------------------------
-----SSSSSS-------------------------------------------------S-SS----------------
------SS--------------------------------------------------S---------------------
--S-----------------------------------------------------------------------------
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--------------------------------S--S--------------S-----S-----------SSS---------
--------------------------------------------------------------------------------
-----------------------------------------------S-----SS-S----------S-S----------
-----------------------------------SSS------------------------------------------
----SSSSS------------S----S--------------------------------------------S--------
--------------------------------------S-------------------S---------------------
--S-------S---SSSSSSS-------------------S---------------S-----------------------
-------------SSSSSS-SS-SSSSS-SSSSSSSSS-SSS-SSSSSS-SSS-S--SS---------------------
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-------------------S--------------S----------------S---SS--S------S-------------
---------------------------------S-----S--------S-S-----------------------------
----------------------------------------S-------SSS-----------------------------
--------------SS-------------------------SS-S-----------------------------------
------S------------------S---------------------------------S------SSSSSSS----S--
----------------S--S----------SSS-------------------------S----S-------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_200
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--------------------CCAGATGCGTGTCCGTGATA----------------------------------------
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>reverse_2059
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----------------------------------------------------------TGCCAAGGAGATGGAAGTCG--
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-------------------------------
>forward_504
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----GCGCTTCGAACACAGTACAC--------------------------------------------------------
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>reverse_2647
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------ATGCATGCTTGGATCGATGC------------------------------------------------------
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-------------------------------
