>input_sequence_53779
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-----------------------------------------------------------------------------ATG
AATCGGTTGGAGGGATCACATGGATGGGAGACACAGATGGAGCAAGTAAAAGTATGCATTAAGATAGGGGTACAGTGCAT
GGAGTCGGACCGAAAGAAGAGGCCTGTTGCACGTCATATAATTGACAGGCTTGATGACACAGCAAATACCGTCGAAGCTG
GTATCAATAGTTCATCAGTTGACGACCAGGTTGGTTTTCTAAAGGAACAATATTGTGAAGAGAAAATTGCAGATCTTTCA
TCTGAGTACATGGGAAAGGGTATCAGGGAATCCTCTGAAACAGAAGAACTCGCGGAACATGT-----------TGGGACA
CTAAGAGAAGAACATTGGCAGCAAGAACAAGAAGATGCTCCAGTTGATCTATGGTCATCATGCTGGGAACAGCAATATAC
GGAG------------CAACAAGGTGCAAGCATTTCTAGCTCTAACTCTGGTGTGTTTCATAAGTTGAAGAATCTGGACA
TCTTCGGCAGAAAAGCACCCAGGGATCTTTACTCGAGGAAGGGTGGGCCTAGATTGGACTTTCCAAATTTGAGAAAG---
TTCAAACAGGGTGAGCTTGAGCCAATTTTGAAGTATGAGAATCTTATTATAAAAGATGTCTTTGGAGAAGTTTACAGAGG
CCTTGTCTGCAATGTACCAATAACAGTTAGGAAGCTGATTAGTGAAACTGAATGTTTAG------------------ATG
AAATCGTAATCCAGTCTCAAGTCATTCACAAAAACATAGTTAGGCTCAGAGGCTGTTGCCTTGAATTTGACAACCACATG
CTAGTCTATGACTTCCTCTCCACGGATAGCCTGCATGACATTCTTCACATCAACGTCGAGGTGCCTCTCAACCTTGGCGT
GCGATTAAGTATTGCTGCAGCATCAGCAGGTGCGCTAGCTTATGCGCATTCAAAGGCGAGTATCAAACTTCTCCATGGTG
ATCTTAAACCAGCAAATATACTCTTCAATGGCAACTTTGTGCCAAAGATCTTTGGCTTTGGCCTGTCAAGGATGGCTGGC
AGCCAAATCATTCC------------------TGACATATCTTATATGGATCCGGTATACCTAGAAACAGGCCGGCTAAC
TAAAAAAAGTGATGTCTACAGTTTTGGACTTATCATCTTGGAGCTTCTTACAAGGAAGAAGGCAACAAATCCTGACAATA
ACAGCTTAGTAAGGAATTTCCTTGAGAATCACAAGCATGGGAGGAAATCAACCGAATTTTTTGACAAGGAAATTGCAGTG
ACAGGAGATTTGGCGC-TCCTTGACAATCTGGCAGATATTGCTGGGGAGTGTCTTATCCTTGATGTGGACCTAAGACCGG
GAATGAAAGAGGTTGAACGGCGCATTG---TGCTGATTCAATCCCGTAAGTTGTGA------------------------
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----------------
>chr6D_1_TraesCS6D01G042100
ACGTGAACTTACATTGGTAGTACTAT---CACCAGAAAATACAGACTTTTGATCTATGAAAAAAATTCTCCTCCCTAAAA
AATAATGGCCCATGAGTCCATGACATGTGGGGCAACCAATGGTAATCAAAGGTAGCTACCTTTTGTGTGCGGAAATGTAG
CCAGGTTTGGCTTTGCTTTAACTCTTGCTGGTCAAAATACTAAATGTTTATTTAGCTAAGGGAGAAAATGATATCCTTTT
CTTGGAATAAATACATGCAACAAAT--ATGGATTTGGGGA--AGTTGATTCTTTTCCATTTTTTGAAAAGGAGAGGCAAC
CTGTTGTAGCAGGTTAAGTTGCACATGGGCATGAATTTGGATTTGCCTATTTTAACAACAAACAGCTGATTGAGATTTAT
G--CTATTCTTGCCTCTTGGAGGATAAACCGGAACATATCTAT--AAAACTCATTTC-------TTCCATTGTTAGGCAT
TTGT-GATTTGCATTAAATTATATGTATCAAAAGGAGTAAAATCTGAAACCCCCTTCATCCATAGATGCGTCTTGCGGAC
TTGAATGGAGGAAGCGCTATAAGATTATCAAGGGAATATGTGAGGGCTTACTTCATCTTCATGACTTATGCATTCTCCAC
TTGGATCTGAAGCCTGGTAATATATTGGTAGATGAACACATGGCACCCAAAATTGCTGATTTTGGTCTATCAAGGTGCCT
TGATAAAGAGCAAACCCAAGTTTTTACT------CCATGTGGATAAAG--------------------------------
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-----------------------------------------------------------------TATTGTGTTTCATAC
ACCAACTAGCTTACCTGATAGGTCAAACTAAAGTGGACACATGTGAGAAATGCACTTATA----TTTCAACAAATGTAAC
ATCCAATCGAGAACATAGCTCAATTTTTAATGATGGCTATCTTTTTCCATTTTGCAATTTCCAGCATGTTTGTTTTTC--
--------------------------------------------------------------------CTCTCTCTCTCT
GGAGTAGCGGTAGACCACATAGTTTATTATCTAGATCTTAACTTACAATTGCAATTTT-TAGGTGGTTGGCACTTGGATG
AATCGGTTGGAGGGATCACATGGATGGGAGACACAGATGGAGCAAGTAAAAGTATGCATTAAGATAGGGGTACAGTGCAT
GGAGTCGGACCGAAAGAAGAGGCCTGTTGCACGTCATATAATTGACAGGCTTGATGACACAGCAAATACCGTCGAAGCTG
GTATCAATAGTTCATCAGTTGACGACCAGGTTGGTTTTCTAAAGGAACAATATTGTGAAGAGAAAATTGCAGATCTTTCA
TCTGAGTACATGGGAAAGGGTATCAGGGAATCCTCTGAAACAGAAGAACTCGCGGAACATGT-----------TGGGACA
CTAAGAGAAGAACATTGGCAGCAAGAACAAGAAGATGCTCCAGTTGATCTATGGTCATCATGCTGGGAACAGCAATATAC
GGAG------------CAACAAGGTGCAAGCATTTCTAGCTCTAACTCTGGTGTGTTTCATAAGTTGAAGAATCTGGACA
TCTTCGGCAGAAAAGCACCCAGGGATCTTTACTCGAGGAAGGGTGGGCCTAGATTGGACTTTCCAAATTTGAGAAAG---
TTCAAACAGGGTGAGCTTGAGCCAATTTTGAAGTATGAGAATCTTATTATAAAAGATGTCTTTGGAGAAGTTTACAGAGG
CCTTGTCTGCAATGTACCAATAACAGTTAGGAAGCTGATTAGTGAAACTGAATGTTTAG------------------ATG
AAATCGTAATCCAGTCTCAAGTCATTCACAAAAACATAGTTAGGCTCAGAGGCTGTTGCCTTGAATTTGACAACCACATG
CTAGTCTATGACTTCCTCTCCACGGATAGCCTGCATGACATTCTTCACATCAACGTCGAGGTGCCTCTCAACCTTGGCGT
GCGATTAAGTATTGCTGCAGCATCAGCAGGTGCGCTAGCTTATGCGCATTCAAAGGCGAGTATCAAACTTCTCCATGGTG
ATCTTAAACCAGCAAATATACTCTTCAATGGCAACTTTGTGCCAAAGATCTTTGGCTTTGGCCTGTCAAGGATGGCTGGC
AGCCAAATCATTCC------------------TGACATATCTTATATGGATCCGGTATACCTAGAAACAGGCCGGCTAAC
TAAAAAAAGTGATGTCTACAGTTTTGGACTTATCATCTTGGAGCTTCTTACAAGGAAGAAGGCAACAAATCCTGACAATA
ACAGCTTAGTAAGGAATTTCCTTGAGAATCACAAGCATGGGAGGAAATCAACCGAATTTTTTGACAAGGAAATTGCAGTG
ACAGGAGATTTGGCGC-TCCTTGACAATCTGGCAGATATTGCTGGGGAGTGTCTTATCCTTGATGTGGACCTAAGACCGG
GAATGAAAGAGGTTGAACGGCGCATTG---TGCTGATTCAATCCCGTAAGTTGTGAGTGGACAAGTCGATGCATTTACAT
GTAGAGTTTGAACATATATGTTGTGTCGAATAAGCTAACCTGGTCTGGAACTGTGGCTTCCATTTTATTCGTACCATCCT
TATGATTTTAGTTATTAATTCTTGCACTGTGTACTGTTGAGTGTTGACTTTGTTCATAGGGGGTTCATCAATGCTGATGT
AGTTCACATCAGGGGCTGCTTCAAACTGTTTGTCTGAATCTGTGTGGTTATATAAAACATTGCACCAGTACTAGATGCCT
AATGAATTCGAAAAAAGTCCACCAAATTTTTGAATAAAAAGTTCTCATATTTGAGAAAAAGTTCACCGATTTTGATAAAA
ATAAAGTTCACAAATTTGAAAAAAGTTCATCAATTTAGAAAAAATATATCACGAAAATGAAAAAGTTCATGGTTTTCAAG
AAAAAAGTACATGATTGGAATAAAGTTTTGAATTTGAAAAAAATCACCTAATCTAGAAAAGAAAAGAGGAAGAGAATGGG
AAACAGAAAAAAAATGATGAAAATCAGCCAAAGTAAACAAAAAAAGAAACAGAGTCCAGAAGGCGCAGAATAAGAAGTAA
AAGGTGCAGGTGAGCCGTTCGAGTTGGTTACTACGTTTGGAAGGGAACACTGAGATACGGAGTTCAAATCTCACCACATG
CAATATTTGTGAAGTTTAAAACAAAGAAAATGGGCTGAGCCCGTGATGCAGGGGGGGTGTGCGCCGGTTTGCTGAGTTGG
CTTTTATTTTATGCGAGTGTGCTGAGATGGCTTTAACCAGCGCTCAAGCCAATTTTAAAGGATATAAGAATCTGCTTTCA
AGAGGTCCCTTTGTAGAAGTTTACCTGGGCATTCTTGATGAAGTACTAGCGAGAGAATGATCGATTTGTAAATGAAGCCA
TCGCCCAATCTGAACACATTCACAAGAACATTGTTAGGCTTGTAAGTTGTTGCGTGGAAGTTGACAACCCAATGCTAGTC
TATGAGTTCTTCTCCA
>chr6B_4
---TGAACTCACATTGGTAGTACTATTATCACCAGAAAATACAGATTTTTGACCTACGGAAAAAAT-CTCCTCCCTAAAA
TACTAGTGGC-------CCACGACATGTGGGGCAACCAATGGTAATTTAAAGTAGCCACCTTTTGTGGGTGAAAATGTAG
CCACGTTTGGCTTTGCTTTAACTCTTGCTAGTCAAAATACTAAATGTTTATTTAGCTAAGTGATAAAATGATTTTCTTTT
CTTGGAATAAATGCATGCGACAAAATAATGGATTCGGGGAGAAGTTAATTTTTTCCATTTTTTGGAAAGAAAGAGGCAAC
CTACTATAGCAGGTTAAGTTGCACATGGGCATGAATTTCGATTTACCTATTTTAACAACAAACATCTGATTGAGATTTAT
--ATTATTCTTGCCTCTTGGAGGATGAACTGGGACATATTTAT--AAAACTCATTTTAGATGCTTTGCATTGCTGGGCAT
TTGT-GATTTGCATTACATTATATGTATCCAAGGGAGGAAAATATGAAACCCCTTTCATCCATAGATGCGTCTTGCAGAC
TTGAATGGAGGAAGCGCTATAATATTATCAAGGGAATATGTGAGGGCCTACTTCATCTTCATGAGTTACGCATTCTCCAC
TTGGATCTGAAGCCTGCTAATATATTGGTAGATGAACACATGGCACCCAAAATTGCTGACTTTGGTCTATCAAGGTGCCT
TGATAAAGAGCAAACCCGGGTTTTTACTTCAAACCTATGTGGTTCGCAGTAAGCCAGTCTCTTGAAACCTCTTTTTTTTT
GTTTGGCACAAATTTATATTTCCATGCACATTAATTGAGCAGGATTTAAAATTCTTTCA--TAGGGGATATTTGGCACCC
GAATTCTTTGGAGGGCAAGTCGCATTTGCGTCGGACATTTACAGTCTTGGAGTCATCATTGTGGAGATGCTGACAGGCAA
GAAGGGGTATTCAGAAGATGAGAATGTAAGAATAAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TTGAGTGTTTGC
TCCATGTAAAATGTATATTTTAAAATAACTATATATATTATACTCTGCTTA-----------------------------
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-----------------------------------------------CTTACATAAATTATAAA---AATCTCACCAAAA
GAAAAAAAAAAGGCACTCCCTCCGTTCAGAATTACTTGTCGCGAAAATGGATGTATCTAGACTATTTTAGTTCTAGATAC
ATCCATTTTTGAGACAAGTAATTCCGAACGGAGGGAGTAAAAGTCGTGTCTCAGATAAGCATGGTAGTGT---AAACATT
ATCTATTTTTGTGGCACCCCACCTTTAGTACCACAATGATTGCTTAATTAACACAATTC-AACATGCATATAAATATTGT
TGACCTAAGATGTAGGAC-AAAATAGCATTTGTAGAACCACGCTTACACTGTTGTCCATGCTAGTTCACATAAAAGATCA
AACTTACGAGAAAATTTGAAATTGCATTTATATATGCCAACATTTTCCCTCCCTTAGGCCTAATGTGGACTGAAAGTACT
CTGCAGTTTTATTTATTGTTTTAATTAGCCCATTCTTGAAGTCAAGGCCTCTTTATGTGGATAACTATTGTGTTTCATAG
ACCAACCAGCTTACCTGATAGGTCAAATTAAAATGGACACATGTGAGAAATGCACTTATA----CTTCAACAAATATAAC
ATGCAACCAAGAACATAACTCAATTTGAAATAATGGCTATTTT--TCCATTTTACAATATCATTCTCTCTCCCTCTCCCT
CCCTCTCCCTTTCCTATCCCTCCCTCCCTCTCCCTTTCCTATCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTGAGCGATAGACCACATAGTTTACTATATAGATCTTAGCTTAAAATTGCAATTTTGTAGGTGGTTGACACTTGGATG
AATCGGTTGGAGGGATTGGATCAATGGGAGACACAGCTGGAGCAAGTAAGAGTATGCATTAAGATAGGGATAGAGTGCAT
GAACTCGGACCCAAAGAAGAGACCTGTTGCAAGTCATATAACTGACATGCTTGGCAACATAGCAAATGCCGTCGAAACTG
GTATCGATAGTTCATCAATTGAGCACCAGGTTTGTTTTCTAAAGGAACAATATTGTGAAGAGAAAATTGCAGATCTTTCA
TCTGAGTCAATAGGAAAGGATATCAAGGAATGCTTTGAAATGGAAGAACTTGCGGAACATGT-----------T------
---AGAGAAGATCATTGGCAGGAAGAAGAAGAAGAAGCTCCAGTTGATCAATGGTCATTGTCCTGGAAACTGCAA-----
----------------------------------TCTAGCTCTAACTCTGGTATGTTGCATAAGTTGAAGAATATGGACA
TCTTCGGCAGAAAAGCACGCAGAGACTTTTACCAGAGGATAGGCGGGTCTGTACTAAAGAGAACTAATCAATTTAAATTT
TTCGAAAAGCGTGAGCTCAAGCCAGTTTTGAAGTATGAGAATCTTAGTTTGAAAGATGGCTTTGGTGAAATTTACAAGGG
CCTTGTCGATAATGTACCAATAACAGTAAGGAAGCTGATTAGTAAAACTGTGGGAGATAACGCTGCTTTGTTG---AATG
AAATCATAATCCAGTCTCAAGTCATTCACAAAAACATTGTTAGGCTCAGAGGCTGTTGCTTGGAATCTGACACCCCCATG
TTAGTCTATGACTTCCTGTCCACAGATAGCCTGGATGACATTCTTCACATCAATATCATGGTGCCTCTCAAGCTTGGCGT
GCGATTAAGTATTGCCGCAACATCAGCAGGTGCTCTAGCTTATGCGCATTCAAAGGCAAGTACCAAACCTTTACATGGTG
ATCTTAAACCAGCAAATATACTCTTCAATGGAAACTTTGTGCCAAAGATCTTTGGCTTTGGCATACTAAGGATGACTGGG
ATGGGGACCCACAA------------CATTGATGACATGTCTTACATGGATCCAGTATACCTAGAAACAGGCCTGCTAAC
TGAAAAAAGTGATGTCTACAGTTTTGGAGTCATCATCTTGGAGCTTCTTACAAGGAAAAAGGCGTCACATTCCGACAATA
ACAGCTTAGTAAGGAGTTTCCTCGAGAATCACAAGCAAGGGAGGAAAACAACTGAGTTGTTTGATAAGCAAATTGCAGTG
ACAGGAGATCTGGTGC-TTCTAGACAATCTAGCAGAAATTGCTGTGGAATGTCTTAACCTTGAAGCAGAACGAAGACCGG
AAATGAAAGATGTTGCAGAGCGCCTTG-----------------------------------------------------
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>chr6A_313
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-------------------------------------------------------------------------------C
CTGCTCTACCAGGTTACTTG---CACGAGCATAAATTTGGCTCCATCTATTTCAACAACAAACGGCTTAATGAGTTTTAT
TCACTATTCCTGGCTCCTTAAGAATAAGTTAGAACATCTTAAAAGAAAACTCATTCAAAATTCTTTGCATGATTAGGAAT
TTGTAGATTTACATTACATTAGCAACATCTAATGGGCGAAATATGAAAACCTTTCCTCTGC--AGATGCATCTCATGGAC
TTGAATGGAGGGAGCGCTACGATATTATCAAGGGAATATGTGAGGGCTTACTTCATCTTCATGAGGAACGCATTCTCCAC
TTAGACCTGAAGCCTGGTAATATATTGGTAGATGATCACATGGTACCCAAAATTGCTGATTTTGGTCTATCAAGGTGCCT
TGATAAAGAGAGAACCCGGGCTTCTACTTTAAACCCATGTGGATCAATGTAAGCCAGTCTGTTGAAAGGCC----TTTTT
GTTTGGCATGAATTTATATTTGAGTGCACATTCATTGACTATGATCTAAAAAACATTCTTGTAGGGGATATTTGGCACCA
GAATCTTTCGGAAGGAAATTCACATTCGCGTCGGACATATACGGTCTTGGCGTTATCATCCTGGAAATACTGACCGGAGA
GAAGGGGTATCCAGAACATGAGGATGTAAGAACCAATTAAGGGCCAGTTCTTTTCGGCGATTCTCCCAGAATCACCCCCT
CCCCAGCTTCTTCCAGAATCGCCACTCCATATTTTTTTTTACAATCATGTCTAGTTAAGATCTAATTAGCTAGGATTGTA
AAAAACATATGGAGTGGTGATTCTGGGAGAAGCTGGGGAGGGGGGCGATTCTCCCAAAAGAACTGGCCTTAAGTGTTGGG
TCCATGTTGAAGTA-----TTCAAATAACTATATATCTTATTGAAAATGCCTAATGGAGGCTAGGCTCCAGGGAGCCTGG
TATTAAAATACCGTATTTGTACATCACAAAAAATAGACAAAATTGTGAATACACCTACACATTTATACTATGTATGCGAA
ATTTTATAACAATATACTTTCACACGTGGTGTAAAAAAAAAGACAACTATGTATTCAAAATGGGCTGACTTTTTTTGTTG
GGCCACAATTTTGTTTCTTCCGTGTAGCTTACAAATCACAATATTTTCAAATAAAAATTCACAGATCCGTAATGAACACA
TACAAGTTTTCACAGAAATATTTTCGATTTTTTTAACTTTTAAATATGATTTTCGTTTTTTTTACTACTGGGCTTCCTGG
AGCTTGTCAGCCAAAATCTGCACTCTATATCTTATACTCTAGTTTACCTTACATAAATTGTAAAGTAAATCTCTCCAAAA
GAAAAACAGAAATT------------------------------------------------------------------
------------------------------------GTAAAAATTTCGTCTCGGACATGCATGGTTTAGTCTAAAACATC
ATCTATTTTGTGGCACCCCCACCTTTAGTACCACATTGCCTGTTTAATCGACAAAAAATAAACTTGCATATAAGCCTCTT
TGTCCTAAGATGTAGCACTAAAATAGCATTTGTAGCACCCCGCTTACACTTTTGTCCTTGCCAGTCCACCTAAAAGATCG
AACTTCATAAGGAAATCTGGAAAAAACGGCCGCACGTGTGG-------CTCCCTTAGGCCTGACGTGGTCTTAAAGTAGG
CTACAACTTTTTTTAATTGTGC---TAGCCCATTCTTGAACTCAAGACCTTTTTACATGGATATCATTTGTGTTTCATA-
-CCAACTAGCTTACTC---AGGTCAATCTAAAGTGGACACATGTGAGAAATGCACTTACGTACTCTTCAGCAAATACAAT
GTCCAACTAACAGCATAGCTCAATTTATAATAATGGCTATATTTTTTTCCATTAGAATTTTGAACATGTCTCTTTTCATA
GATCACTTGTCGT-------------------------------------------------------------------
-----------------CATAGTTTATTTCTATGTC--TAAGTCACAATTGCAATTTTGTAGGTGGTTAAGACTTGGATG
AATAGGTTGGAGGGATCAGATCAATCGGAGGCACACTTGGAGCAAGTTAGAGTATGCATCAAGATAGGCATGGAATGCAT
TGACTCGGACCCAAAGAAGAGACCAGTTGCACGGCATATAAATGATAGGCTTGATAAAATGGCAAGTACCATGGAAACTG
GCATCAGTAGTTCATCATTTGAA---CAAGTTAGTTTCCTAAAGGAAG------------------TTGCAAAGCTTTCA
TCTGAGTACCTTGGAAAGGACATCAAGGAACATGCTGAAACAGAAGAACTTGCAAAATATGTGTTGGGGCACCT------
---AAAGAAGATCATTAGCAGCAAATTCGAGAAAAAGCTCTAGGTGATCAATGGTCATTATGGGGAGCGCAAGATACAAA
TCAAAATGTCATCCC---ACAAGGTGCGAGCATTTCTAGCTTTTGCTCTGGTTTTCTCCACAAGTTGTACAATATGGACA
TCTTCAACACAAATGCACACTTGAATT---ATGTAAGGGACAGTGGGCTTACGTTGCAGAGAGCAAAACAACTGAGACCT
TTCAAAAGGGATGAGCTCGAGCCATTTTTAAAGGATTTTTATTTCATTGGAAGAGGTGGCTTTGGAGAAGTTTACATGGG
ACTTGTTAATGATGTACGAGTCGTAGTAAGGAAGCTGATTAGTGGTACTATGTCGGAGAATGGGGAGCCATTTCCAAAAG
AAGTCCGCAACCAATGTGAACTTATTCACAGAAACATCATTAGGCTCACAGGTTATTGCTTTGAAGTTGACACGCCAGCG
CTAGTCTATGAGTATCCCTCCAGAGGTAGCATCCATGACATTCTTCACAGCAACAG---GGTGCCTCTCAACTTGGATTT
GCGTTTAAGTATAGCTGCAGAATCATCAAGCGCTCTAGCTTACATGCATTCATTTGGCATGTGTAAAATCTTATTTGGTA
GTTTTAAACCATCTTATATACTCTTGGATGACAACTTTATGGCTAAGGTCTCATACTTTGGCATGTCAAGCATGGCTGCG
GG---------ACACAACGGAACAATCGATGGTGAAATGGTTTATATGGATCCAGCATATGTACAAACAGGCCTGCTAAT
CGGAAAAAGTGATGTCTACAGCTTTGGAGTTACCACCTTGGAGCTTGTTACTAGGAGGAAGGCCACACATTCTGACAATA
ACAGCTTGGTGAGGAATTTCCTTGAGAATCACAAGATGGGGAGGAAATCAACTGAGTTGTTTGATGAGGAAATTGTAGTG
TCAAAAAATCCGGAGT-TTATTGAGATTCTTGCAAAAATTGCTGTGGAGTGTATTAACCTCTATCCGGACGAAAGACCGA
CAATGGAAGATGTTG-----------------------------------------------------------------
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>chr6D_952
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---------------------------TATCTTGATCTGAACTCACCATTGCATCTTTAAAGGTAGTTGAGAATTGGATG
AATCGGTTGGAGGCAGTAGATCAAAAGGAGACGCAGTTGGAGCAAGTAAGAGTATGCACTACGATAGGGATAGAGTGCAT
GGACCCTAACCCAAAGAAGAGACCGTTTGCACATCATATAGTCAATAAGCTTGATAAAACGGCAAGTATCGTCGAAACTG
GCATCACTAGTCCATCTGTTGAGCAGCAGGTTAGATCCCTAAAAGAACAACACAGTCAAAGGAAAATTGTGGATCTTTCA
TTTGAGTATCTCATAAAAGATATGAATGGGCGCACTAAAACGGAAGAACTCATGGAATTTAT-----------TGGGGCA
TTTA---AAGATCATTGGCGGCACGCGAAAGAACAT------------CGGTGGTCACTACGGGGAGTGCATCGTACAAA
GCAAAATACCAGCCAACAACAAGGGGCAAGTATTTCTAGCTCTAACTCTGTTGTGCTC---------AACAAGTTGAACA
TCTTTAGTACAAAAGCACGCAGGAATT---ATGCCAGGAATGGTGGGCCTATGCTTGAGAAGATAGACATGTTGAAACTT
TTCAAGAAGGAGGAGCTTAAGCCAGCTATTAAGGACAAGAATCGTATTGGAAGAGATGTCTTTGAAGAAGTTTACATAGG
CCTTGTTGATAGAGTACCAGTCATAGTAAAGAAGCAGATTAGTGGTATTGTGCTACAAAATGGACAG---TTTGCAAAGG
AAGTCATTATCCAATCTCAAGTCCTCCACAAGAACATTGTTAGGCTCATAGGTTGTTGCGTGGAAGTTGACATCCCGATG
CTAGTATATGAGTATCTCTCCAATGACAGCCTCCATGACATTCTTCACAACAACTGCAAGGTACGTCTCAACTTGGGCGT
GCGTTTAAATATTGCCACAGAATCAGCACGTGGTCTAGCTTATATGCATTCAAGGCA------CAATATCTTACATGGTA
ATATTAAATCAGAAAATATACTCTTGGATGACCATTTTGTGCCAAAGATCTCAAATTTTTGCATATCAAGATTGACCGGG
AGAGGCTACAAACACACCAGAATAGCCAAGGGTGACGATGCTTATATGGATCCAGTATACCTACAAACAGGCCTACTTAG
CGAATATAGTGATGTGTACAGTTTTGGAGTCGTTATATTGGAACTTCTTAGCAGGAAGAAGGCCACACACTCTGACAATA
ATAGCTTAGTAAGGAATTTCCTTGAGAATCACAAGCTGAGTAGGAAATCAACCGAGCTATTTGATGAGAAAATTGCAGTG
GTGGAGAATCTGGAGCTTCTTTGACAATCTGATACAACTTGTTGTGGAATGTCTTAGCAAAAACTTGGATCTAAGACCGA
AAATGATAGATGTTG-----------------------------------------------------------------
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----------------
>chr6D_974
--------------------------------------------------------------------------------
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-------------------------------------------------TGCAACTTTGTAGGTAGTTGCAAATTGGATG
AATCAGTTGGAGGCATCAGATCAGTGGCATACACAGTTGGAGCAAGTAAGAGTATGCACTAAGATAGGGATACAATGCAT
GGACTTGAACCCAAAGAAGAGACCAGTTGCACGCCATATACTTGATAGACTAGATAAAACAGAAATTACCATCGAAACTG
GCATAAGTGGTTCATCAGTTGAGCAGCAGGTTAGTTTCCTAAAGGAACAGTATTGCCAAGAGAAAAACTCAAAGCTTTCT
TATCAGTACCTTGGAAAGGAAATCAAGGAACACGCTGGAACAGAAGGACTTGCAGAATATGTAGAGAT--ACCT------
---AGAGAAGATCATTGGCAGCAAGGGGAGCAAGAAGCTTCCAGTGATCAGTGGCCATTAAGGGGAGTGCAAGATGTAAA
GAAAACTGTAAGCCC---ACAAGGTGCAAGTATTTCTAGCTCTAACAATGGCGTGCTCTACAAGTTGAACAATTTGGACA
TCTTCGACAGAAAAGCACACAGGAATC---ACGTGCGGTATGGTGGGCCTACATTGGAGAATGTAAATTTTGTGAAACTT
TTCAAAAAAAAGGAGCTCAGTCCAATTTTAAAGAATAAGAATCTTATTAGAAGAGATAGCTTTGGAGTAGTTTACATGGG
CCTTGTTGATAGTGTGCCGGTTACAATAAGGAAGCTATTTAGTGGTAGTGTGGTACAGAATGAAGAT---TTTGCAAATG
AAGTCATCATCCAGTCTCAAGTCATTCACGGAAATATGGTTAGGCTCATAGGTTGTTGCCTTGAATTTGAAGTCCCGATG
CTAGTCCATGAGTTTCACTCTACAGCTAACCTCCATTACATTCTTCACATCAACATCAAGGTGCCTCTTAACCTTGGCGT
GCGATTAAGTATTGCTGCAACATCGGCAGGTGCTCTAGCTTATGTGCATTCTGCATTTGCTACGAAAATATTACACGGTG
ATGTTAAACCATCAAATATACTCTTGGATAACAACTTTGTGCCAAAGATCTCAGACATCGGCATATCAAGGTTGATCGTG
AGAGGCCATGAACATAGCGGAGCATGCATTGGTGACATGGCTTATATGGATCCTCTATATGTACGAACAGGCCTACTGAC
CGAACAAAGTGATGTCTACAGTTTTGGAGTTATCATCTTGGAGCTTGTTACTAGGAGAAAGGCCACACATATGGACAAAA
ACAGCTTAGTAATTAATTTCCTTGAGAACCACAAGCAGGGGAGGAAATCGACCGAGTTGTTTGACAAGGAAATTGCAGTG
GCAGAAAATTTGGAGC-TTCTTGACACTCTGGCAGGAATTGCTGCTGAATGCCTTAATTTTGATGTGGACCTAAGACCAA
CAATGGTAGATGTCGCAAATCGTCTATCCATGCTGAATCAATCATGTAATT--TGAGTTGACAAGTTGATGCATTTACTA
GTGGAGTTTTAACATGTATGATGTGTTGAATAAGCT--------------------------------------------
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----------------
>chr6A_974
TGCAAC--------------------------------------------------------------------------
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------------------------------------------------------TTTTGTAGGTAGTTGCAAATTGGATG
AATCAGTTGGAGGCATCAGATCAGTGGCATACACAGTTGGAGCAAGTAAGAGTATGCACTAAGATAGGGATACAGTGCAT
GGACTTGAACCCAAAGAAGAGACCAGTTGCACGTCATATACTTGATAGGCTAGATAAAACAAAAATTACCATCGAAACTG
GCATAAGTGGTTCATCAGTTGAGCAGCAGGTTAGTTTCCTAAAGGAACAATATTGCCAAGAGAAAAATTCAAAGCGTTCA
TATCAGTACCTTGGAAAGGAAATCAAGGAACACGCTGAAACAGAAGGACTTGCAAAATATGTAGAGAT--ACCT------
---AGAGAAGATCATTGGCAGCAAGGGCAGCAAGAAGCTTCGAGTGATCAATGGCCATTAAGGGGAGTGCAAGATGTAAA
GAAAAATGTAAGCCC---ACAAGGTGCAAGTATTTCTAGCTCCAACAATGGTTTGCTCTATAAGTTGAACAATTTGGACA
TCTTTGACAGAAAAGCACACAGGAATC---ACGTGCGGTATGGTGGGCCTACATTGGAGAATGTAAATTTTGTGAAACTT
TTCAAAAAAAAGGAGCTCGGTCCAATTTTAAAGAATAAGAATCTTATTAGAAGAGATAGCTTTGGAGTAGTTTACATGGG
CCTTGTTGATAGTGTGCCAGTTACAATAAGGAAGCTATTTAGTGGTAGTGTGGTACAGAATGAAGAT---TTTGCAAATG
AAGTCATCATCCAGTCTCAAGTCATTCACGGAAATATGGTTAGGCTCATAGGCTGTTGCCTTGAATTCGAAGTCCCGATG
CTAGTCCATGAGTTTCACTCTATAGCAAGCCTCCATTACATTCTTCACACCAACATCAAGGTGCCTCTTAACCTTGGCGT
GCGATTAAGTATTGCTGCAACAATGGCAGGTGCTCTATCTTATGTGCATTCTGCACTTGTTAAGAAAATATTACACGGTA
ATGTTAAACCATCAAATATACTCTTGGATAACAACTTTGTGCCAAAGATCTCAGACACCGGCATATCAAGGTTGATCGTG
AGAGTCCATGAACATAGCGGAATATCCATTGGTGACATGGCTTATATGGATCCGGTATATGTACGAACAGGCCTGCTGAC
CGAACAAAGTGATGTCTACAGTTTTGGAGTTATCATCTTGGAGCTTGTTACTAGGAGAAAGGCCACACATATGGACAAAA
ACAGCTTAGTAATTAATTTCCTTGAGAACCACAAGCAGGGGAGGAAATCGACCGAGTTGTTTGACAAGGAAATCACAGTG
ACAGAAAATTTGAAGC-TTCTTGACACTCTGGTAGGAATTGCTGCTGAATGCCTTAATTCTGATGTGGACCTAAGACCAA
CAATGGTAGATGTCGCAAATCGTCTATCCATGCTGAATCGATCCTGTAATT--TGAGTTGACAAGTTGATGCATTTACTA
GTGGAGTTTGAACACGTATGATGTGTTGGATAAGC---------------------------------------------
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>chr6A_1397
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----------------CAACAAGGGGCAAGTATTTCTAGCTCTAACTCTGTTGTGCTC---------AACAAGTTGAACA
TCTTTAGTACAAAAGCACGCAGGAATT---ATGTCAGGAATGGTGGGCCTATGCTTGAGAAGATAGATATGTTGAAACTT
TTCAAGAAGGAGGAGCTTAAGCCAGCTATTAATGACAAGAACCGTATTGGAAGAGATGTCTTTGAAGAAGTTTACATAGG
CCTTGTTGATAGAGTACCAGTCATAGTAAAGAAGCAGATTAGTGGTACTGTGCTACAAAATGGACAG---TTTGCAAAGG
AAGTCATCATCCAATCTCAAGTTCTCCACAAGAACATTGTTAGGCTCATAGGTTGTTGCGTGGAAGTTGACATCCCGATG
CTAGTATATGAGTATCTCTCCAAAGACAGCCTCCATGACATTCTTCACAACAACTGCAAGGTACGTCTCAACTTGGGCGT
GCGTTTAAATATTGCCACAGAATCAGCACGTGGTCTAGCTTATATGCATTCAAGGCA------TAATATCTTACATGGTA
ATATTAAATCAGAAAATATACTCTTGGATGACCATTTTGTGCCAAAGATCTCAAATTTTTGCATATCAAGGTTGACCGGG
AGAGGCTACAAACACACCAGAACAGTCAAGGGCGACGATCCTTATATGGATCCACTATACCTACAAACAGGCCTACTTAG
CGAATATAGTGATGTGTACAGTTTTGGAGTCGTTATGTTGGAACTTCTTACCAGGAAGAAGGCCACACACTCTGGTAATA
ATAGCTTAGTAAGGAATTTCCTTGAGAATCACAAGCAGGGTAGGAAATCAACCGAGCTATTCGATGAGAAAATTGCAGTG
ATGGAGAATCTGGAGC-TTCTTGACAATCTGGCACAACTTGTTGTGGAATGCCTTAGCCAAAACTTGGATCTAAGACCGA
AAATGATAGATGTTG-----------------------------------------------------------------
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>SNPs
SSS------S-----------------------------------S------S---S-S-------S-------------
S-SS-SS-S-SSSSSSS---S-------------------------SS--S-----S----------S-S-S--------
---S-------------------------S------------------------------S--S--------S-S-----
------------S-----S-----S---------S-----------S---S---S-SS-----S----SSS---------
---S-S--------------------------------------S-----------------------------------
S----------------------------S---------S----------------S---------S-------------
----------------S------------S--S----S-----S---------S--------------------------
----------------------S-----------------------------------------S---S-----------
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-----------------SS-------------------------S--S--------------------------------
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-------------------------------------------------------------------------------S
----------------------------------------------------------------S----------S----
------S-S-----------------S----S--------S------------S-------S-S-------S----S---
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SSSSS----S-----------------------------------------------------------S----------
------------------S--SS-------------S------------S-------------------S----------
---S-------S---------S---------------------------------S--------------------S---
----------------------SS--------S-----------------------------------------------
-----------S-------S-----S-----S---------------------------------------------S--
S-S--------S-------------------------------------S--------S----------------SSS-S
-S-S-----------------------------------------------------S---------------S------
------------------S-------------S-------S----------S------SSS-S--------SSS--S---
------S---------------------------------------------------------------------S---
-------SSS-----------------S----------------------SS--SSS-S---------------------
-----S-------------------------------S----------------------------------S--S----
-----------------------S------------------------------S--S----------------------
---------------------------------S-----------------------S----S-------S-S-------
--------------------------------------------------------------S----------------S
--SSSS-S--SS-S------------------------S----------------------------------S------
-S--------------------------S----------------------------------S---S--S---------
-------------------------------------S-----------------S--S---------------------
-------------S----------------------S-------S-----------S-----------------------
S---------S----S-SS----S------------S-------S----S-SS-----S-------S-----------SS
--S------------S----S-----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_164
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----------------------------------------------------------------GTGTGCGGAAATGTAG
CCAG----------------------------------------------------------------------------
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>reverse_2877
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----------------------------------------------------------------------------ATAC
GGAGCAACAAGGTGCA----------------------------------------------------------------
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>forward_2503
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---CGGTTGGAGGGATCACATGG---------------------------------------------------------
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>reverse_4091
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----------AGGGGCTGCTTCAAACTGTT--------------------------------------------------
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----------------
