>input_sequence_53764
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--------------------------------------------------ATGGCCACGGCGGCGGCGGCGAAGCGGAAG
CCGGTGTTCGTCAAGGTGGACCAGCTCAAGCCCGTCACCAGCGGCCACACGCTCGTCGCCAAGGTGCTCAGCTCCAAGAC
CGTCCTCCAGAAGGCCCGCGCCGCTGGCGGCCCCGGCCCGGCCGCCAAGCCCACCAGGATCGCCGAGTGCCTCATCGGCG
ACGAGACCGGCTGCGTCCTCTTCACCGCCCGCAACGACCAGGGTACGATCTACTCTCC----------------------
-----TTTTTGGCGTCATGCGCGGGGTACTCGTGACCGAT----ACATTGACTT--------------------------
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------------GACTTGAGATTCTCGCGC---GCATACAACCTGGATTGCCACATCAAAGTACCGTAT--TATGTTTTT
TTAATCCGTTATCATGGA--AGGACTGTGTATGCGGCAGAACACATAGAAG-TGTATTACAATCCTAGAATCGGATTGTG
AAAAACGGAAGATGTAAAAACAAATTCAGTATATAT-CCAAGTAGCAAGTGAACTGAAAAGTGTCGATGCCTTGTAAAAG
G---------TCCTGTAGTATAATAAGTGTAC------------------------------------------------
----------------------------------------------------------TATATATTTGTGCAAGTGCGTC
TGAAACAGCAATGCCCTGGTTGGCTGG----TTTTTGTTAAATTCCGCTAGTAGTAGGTGTAT--TATCTTATTGAAAGG
CTCTTGTGCACTGAAAATGGAGCCCTTGTGCTCCCGAAGTTTACCCAGCCCA--TTGCCAATCAATTGTCATG--GGTCT
CATTAGCTTGGTATAGAGGCTTTCAGGCACACACACCTGGTCAAGTTTGTCTAAAAAAAAACCTGGTCAAGTCGATTGGT
AGATTGTTGTTACATTATATGGTTAGGCTGGTGATGGCTCAAAAGAGTTTAAACTTGAATCACACTATGCTTTTACCATA
TTAATTTCGTATTATGTGCATCATGTTTTCCTGCTTATTACATTAGTGTTACTGGCAATAAGCA-TAATTCATTTTGCAT
AATTAAATGGTCATATTCCAAATCTACTTTGTATGCTTAGGAACAAGAAAAATTAAATCCTTACATATTACTATGTTCCT
TTTATGCTTTACTGAAACTTGTTGATCCTCAACTCATGTGCTAGGGCACAAATGCTCTGCCATAAATGCATGATTATGTG
ACTGATTTGCTAAACATTGGTTTACTTGGGCGATATAACAAGCATATACCTTTTTGCAGTTGATGTTTTGAAGCCTGGCA
ACACTGTCATTATACGCAATGCAAAGATTGATATGTTCAAAGGGTCAATGAGGCTTGCTGTTGACAAATGGGGCCGTGTT
GAAGTAACTGAACCAGCAAGCTTCGGTGTAAAGGAGGACAACAATCTTTCACTTGTGGAGTATGAACTTGTCAATGTTGA
AGAGTGA-------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G292300
CTCGCGAGCATGATGACCGGGGTGAAGACCATGAAGGTGGATCTCAACACCATGTCGTCAAGGAAGAGGTCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGCGCCATCTTTTTTGTATGCCGGCAGG
TGTGCCGGCATGACCATGGGAGCCGCGATGGCGTGGTCGAACTCAAGTCTCACTCTTTTTTGTGTGCTGGCATGTGTGCC
GGCCGACTGGCGAGTGCGCCAGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGC
CGACATGAGACATGGCCGCCGGCATGATCGGCCGCGGGCCTTTTTTATTTAAAAATTGAATGCGGACATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATACAAAACTGGACGGACGCC-GGGCGGGTGGCCGACCCAAACGGACAAAAAGC
GGACAAATGCGTCATCCGTTTGAGTCGGCTCGTTGGAGTTGCCATAAGACATCTCTCATTTGTTTTTGTACTACCAAACA
TGGTGCACATTTTATATGCTTGAAGAAAACCAGACGAAACGCAAGCCAAGCGTCTAGAGCAGGGATTTGTCACTGAAAGA
AAAGAAATGCGGC---TAGTAGCAGCGTACTACTGCTAGCTGCGTAGGCAATCACGGCAAGCAGGCTATAT--TCCGCAC
TGACGGACTGCTGTGGC-TTTTCAGTTTTCACCTTTTTGGAAAAGGAGAAACGGATAAGCACCATTTGACTATCTTGCCA
CGCTATTCGCCCTTCC-CCCTCGTAAGGTAAGTAACGCCTAATTTAACGACTCCTCCGCATC-TTAGTGGCCTCCTCGAT
CGCAGGCTGAGACTCGCGCAACCTTCCCATCCCATATTAAACTCGCCCC-ACCCCATCTAGGGTTTGGCCCTCCCAAGAG
ACCCGCGACCCCCTTAATCCCTCTCCCAACCCTTATCTGCATCCCTCTCCATGGCCACGGCGGCGGCGGCGAAGCGGAAG
CCGGTGTTCGTCAAGGTGGACCAGCTCAAGCCCGTCACCAGCGGCCACACGCTCGTCGCCAAGGTGCTCAGCTCCAAGAC
CGTCCTCCAGAAGGCCCGCGCCGCTGGCGGCCCCGGCCCGGCCGCCAAGCCCACCAGGATCGCCGAGTGCCTCATCGGCG
ACGAGACCGGCTGCGTCCTCTTCACCGCCCGCAACGACCAGGGTACGATCTACTCTCC----------------------
-----TTTTTGGCGTCATGCGCGGGGTACTCGTGACCGAT----ACATTGACTT--------------------------
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------------GACTTGAGATTCTCGCGC---GCATACAACCTGGATTGCCACATCAAAGTACCGTAT--TATGTTTTT
TTAATCCGTTATCATGGA--AGGACTGTGTATGCGGCAGAACACATAGAAG-TGTATTACAATCCTAGAATCGGATTGTG
AAAAACGGAAGATGTAAAAACAAATTCAGTATATAT-CCAAGTAGCAAGTGAACTGAAAAGTGTCGATGCCTTGTAAAAG
G---------TCCTGTAGTATAATAAGTGTAC------------------------------------------------
----------------------------------------------------------TATATATTTGTGCAAGTGCGTC
TGAAACAGCAATGCCCTGGTTGGCTGG----TTTTTGTTAAATTCCGCTAGTAGTAGGTGTAT--TATCTTATTGAAAGG
CTCTTGTGCACTGAAAATGGAGCCCTTGTGCTCCCGAAGTTTACCCAGCCCA--TTGCCAATCAATTGTCATG--GGTCT
CATTAGCTTGGTATAGAGGCTTTCAGGCACACACACCTGGTCAAGTTTGTCTAAAAAAAAACCTGGTCAAGTCGATTGGT
AGATTGTTGTTACATTATATGGTTAGGCTGGTGATGGCTCAAAAGAGTTTAAACTTGAATCACACTATGCTTTTACCATA
TTAATTTCGTATTATGTGCATCATGTTTTCCTGCTTATTACATTAGTGTTACTGGCAATAAGCA-TAATTCATTTTGCAT
AATTAAATGGTCATATTCCAAATCTACTTTGTATGCTTAGGAACAAGAAAAATTAAATCCTTACATATTACTATGTTCCT
TTTATGCTTTACTGAAACTTGTTGATCCTCAACTCATGTGCTAGGGCACAAATGCTCTGCCATAAATGCATGATTATGTG
ACTGATTTGCTAAACATTGGTTTACTTGGGCGATATAACAAGCATATACCTTTTTGCAGTTGATGTTTTGAAGCCTGGCA
ACACTGTCATTATACGCAATGCAAAGATTGATATGTTCAAAGGGTCAATGAGGCTTGCTGTTGACAAATGGGGCCGTGTT
GAAGTAACTGAACCAGCAAGCTTCGGTGTAAAGGAGGACAACAATCTTTCACTTGTGGAGTATGAACTTGTCAATGTTGA
AGAGTGAAAATCACATCCATCTTAATCA---GAAGTGCTTTCCCAAGCCTGTTGGTCAAATCTACTTGTTGAGTTGTCTA
GAATGTGAAAGATGGATCTTCTGAGTTCATATTGGAATTGTTCGCTCGAACTACCGCAAGTTCCTTCTTATCAAGCATTT
CTATCTATGAGTGATTGTTAGTTGCTGCAGCAGTTGTGTTTCTGAGAACAAATGTGATGTGCTGAGCAGTAATATACAAT
TTGATCTCCTAAATGGATTATGCACCTTTCAGCTTGCAATTTTTTATTTATTTTAAACACTGATGATGTG-------TGT
TCTTGCGATGATCAACACACTGATGTTGGATAGTGGCTTTGATACTACCCACAAAAGGAGGATTGTTGAGTTACGATTGG
GTGATGGAAAGAACCATATTTGTATTCTCAACAGAAAATAATTATTTGAATTTGAAACCACTTGTTTTCTACGAACTAGC
AAAGTGCATGTGGCTTGCATCGCTCACAAACTTGAAAACTCCCTATTTATGGTATATACAACTAAAAATATATTAGTAGC
TTTGACCCAAAATTCATTC----------------------GGGGGGA----------------GGCATGGGTTTGTTGC
AAATGAGGGGCGGACAGGTGGGTCTTTATGCAAATATACCACATCTTACTTCACATCACATTCATTAGATGGAGACCGAA
TGGTCAAAAGTGTCCGATGGC--AGACACCATCATCAC-AAGGGCGTGCTTGGTAGTCTGCATCATTTTTTATGCATTTG
CATATGTGATTAAGGTCGGGCCTCGCTTAGGGCCAGTTCTTTTGGGAGGCTTAAAAATTAAGCTGCCTCTTTCCAGTTTA
CAAAATATGCCTCCCTCTAAGTTTGTTGAGACTTCTATATTAG----------------TTAGAAGAACAAGAGAGGCGG
CTTATGGAAAAAGCTGGGGAGGGGGAGGGCTTTTTTTAAGCTGCCAAAAGAATTGGCCCTTAGTGCTAAAATCCATGTTT
TGCACATATTTTGTTTGCCTGCATCCTTCCCATG
>chr3D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGCGCCATCTTTTTTGTATGCCGGCAGG
TGTGCCAGCATGACCACGGGAGCCGCGATGGCGTGGTCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGGCATGTGTGCC
GGCCGGCTGGCGAGTGCGCCATCATGAAATATGGTGATATTTTCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTAC
TGGCATGAGACATGGCCGCTGGCATGATCGGCCGCGGGTCTTTTTTATTTCAAAGTTGAATGCGGACATGAAATGGGTCG
GCGTGTTGGGCGCACTGCCGACCCAA-TGCAAAACTGGGCTGACGCC-GGGCGGGCAGCCGACCCAAACAGACAAAAAGC
AAACAAATACGCCGTCCGTTTGGGTCGGCCCGTTGGAGTTGC--------------------------------------
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>chr1D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGTCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCAACGACGAGTGATCTATGGCGGCGAGCGCCATCTTTTTTGTATGCCGGCAAG
TGTGCCGGCATGACCACGGGAGCCGCGATGGTGTGGTCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGGCATGTGTGCC
GGCCGGCTGGCGAGTGCGCCAGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGCCGGCGCTGGCATCGTGC
CGGCATGAGACATGGCCGCTGGCATGATCGGCCGCGGGCCTTTT-TATTTAAAAGTTGAATGCAGGCATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACGCC-GGGCGGGCGGCCGACCCAAACGGACAAAAGGC
AGACAAATGCGCCGTCCGTTTGGATCGGCCCATTGGAGTTGC--------------------------------------
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>chr5D_1
CTTGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGTCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGGGCCATCTTTTTT-TATGCCGGCAGG
TGTGCCGGCATGACCACGGGAGCCGCGATGGCGTGGTTGAACTCAAGTACCACCCTTTTTTGTGTGCTGGCATGTGTGCC
GGCCGGCTGGCGAGTGCGCCAGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGTCGGCGCTGGCATGGTGC
CGGCATGAGACATGGCCGCTGGCATGATCGGCCGCGGGCCCTTTTTATTTAAAAGTTGAATGCCGGCATGAAATGGTTCG
GCACGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACGCC-GGGCGGGCGGCCGACCCAAACGGACAAAAAGT
GGACAAATGCGCCGTCCGTTTGGGTCGGTCCGTTGGAGTTGC--------------------------------------
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>chr7D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACTGTGTCGCCAAGGAAGAGGCCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGGGCCATCTTT-TTGTATGCCGGCAGG
TGTGCCGGCATGACCACGGGAGCCGCGATGGCGTGGTCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGGCATGAGTGCC
GGCCGGCTGGCGAGAGCGCCAGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGCCGACGCTGGCATGGTGC
CGGCATGAGACATGGCCGCTGGCATGATCGGCCGCGGGCCTTTTTTATTTAAAAGTTGAATGCAGACATGAAATGGGTCG
GCACGCTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACGCC-GGGCGGGCGGCTGACCCAAACAGACAAAAAAC
GGACAAATGCGCTGTCCGTTTGGGTCGGCCTGTTGGAGTTGC--------------------------------------
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>chr7D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGA
GAAGATGCAGGCCCACATGCTCAAGTTCGACGACGAGTGATCTATGGCAGCGAGCGCCATCTTTTTT-TATGCCGGCAGG
TGCGCCGGCATGACCACGGGAGCCGCGATGGCGTGGTCGAACTCAAGTTCCACCCTTTTT-GTGTGCTGGGATGTGTGCC
GGCCGGCTGGCGAGTGCGCCAGCATGAACTGTGGTGATATTTTATGAAGCCGACATTGTATGCCGGCGCTGGCATGGTGC
CGGCATGAGACATGGCCGCTGGCATGATCGGCCGCTGGCCTTTTAAAA--AAAAGTTGAATGCGGACATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACGCC-GGGCGGGCGGCCGACCCAAACGGACAAAAAGC
GGACAAATGCGCCGTCCGTTTGGGTCAGCCCGTTGGAGTTGCTCTAAGAGCGTCTC------------------------
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>chr2D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATAAAGGTGGATCTCAACACCGTGTCGTCAAGGAAGAGGCCATGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCAACGACGAGTGATCTATGGCGGCGAGCGCCATCTTTTTTGTATGCCGGCAGG
TGTGCCGGCATGACCACGGGAGCCGTGATGGCGTGGTCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGACATGTGTGCC
GGCCGGCTAGCGAGTGCGCCAGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGC
CGGCATGAGACATGGCCGCTGGCATGATCGCCCGCCGGTCTTTT---TTTAAAAATTGAATGCGGACATGAAATGGGTCG
GCTCATTGGGCGCACTGCCGACCCAAATGCAAAAGTGGACGGACGCC-GGGCGGGCGGCCGACCCAAACGGACAAAAAGC
GGACAAATGCGCCGTCCGTTTGGGTCGGACCAATGGAGTTGC--------------------------------------
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>chr2D_1
CTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCATGGTTCGA
GAAGATGCAGGCCGATATGCTCAAGTTCAACGACGAGTGATCTATGGCGGCGAGCGCCATCTTTTTTGTATGCCGGCAGG
TGTGCCGGCATGACCACGGGAGCCGCGATGGCGTGATCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGACATGTGTGCC
GGCCGGCTGGCGAGTGCGCCGGCATGAACTGTGGTGATATTTTCTGAAGCCGGCATTGTATGCCGGCACTGGCATGGTGC
CGGCATGAGACATGGCTGCTGGCATGATCGTCCGCCGGCCTTTT---TTTAAAAGTTGAATGCGGACATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGACGGACG-C-GGGCAGGCGGCCGACCCAAACGGACAAAAAGC
GGACAAATGCGCCGTCCGTTTGGGTCGGACCATTGGAGTTGC--------------------------------------
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>chr5D_6
-----GAGCATGATGACCGAGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTTGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGGACCATCCTTTTTGTATGCCGGCAGG
TGTGCCGACATGACCACGGGAGCCGCGATGGCGTGGTCGAACTCAAGTCTCACCCTTTTTTGTGTGTTGGCATGTGTGTC
GGCCGGCTGGCGAGTGCGCCAGCATGAACTGTGGT---ATTTTCTGAAGCCGGCATTGTATGCCGGCGCTGGCATGGTGC
CGGCATGAGACATGGCCGCTGGCATAATCGGCCGCGGGCCTTTTTTATTTAAAAGTTAAATGCGGACATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACG-CCGGGCAGGCGGCCGACCCAAACGAACAAAAAGC
GGACAAATGCGCCGTCCATTTGGGTCGGCTCGTTGGAGTTGC--------------------------------------
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>chr1D_7
------AGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACCGTGTCGCCAAGGAAGAGGCCGTGGTTCGA
GAAGATGCAGGCCGACATGCTCAAGTTCGACGACGAGTGATCTATGGCGGCGAGGGCCACCTTTTTTGTATGCCGGCAGG
TGTGCCGGCATGACCACGGGAGCCGCGATGGCGTGGTCGAACTCAAGTCCCACCCTTTTTTGTGTGCTGGCATGTGTGCC
GGCCGGCTGGCGAGTGCGCCAGCATGAACTGTGGT---ATTTTCTGAAGCCCGCATTGTATGCCGGCGCTGGCATGGTGC
CGACATGAGACATGGCTGCTGGCATGATCGGCCGCGGGCCTTTTTAATTTAAAAGTTGAATGCGGACATGAAATGGGTCG
GCGCGTTGGGCGCACTGCCGACCCAAATGCAAAACTGGGCGGACG-CCGGGCGGGCGGCCGACCCAAACGGACAAAAAGC
GGACAAATGCGCCGTCCGTTTGGGTCGCCCCATTGGAGTTGCTCTAAG--------------------------------
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>chr3B_566
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------ACATTTTATATGTTTGAAGAAAACCAGACGAAACGCAAGCCAAACGTCTAGAGCAGGGATTTGTCACTGAAAGA
AAAGAAATGCGGCTAGTACTAGCAGCGTAGCTG----------GTAGGCAATCACGGCAAGCAGGCTATAT--TCCGCAC
TGACGGGCTGCTGTGGC-TTTTCAGTTTTCACCTTTTTGGAAA-GGAGAAACGGATAAGCACCATTTGACTATCTTGCCA
CGCTATTCGCCCTTCCACCTCGTAATGGTTAGTAACGCCTAATTTAACGACTCCTCCGCATCATTAGTGGCCTCCTCGAT
CGCAGGCTGAGACTCGCGCAACCTTCCCATCCCATATTAAACTCGCCCCCACCCCATCTAGGGTTTGGCCCTGCCAAGAG
ACCCGCGACCCCCTTAATCCTTCTCCCAACCCTTATCTGTATCCCTCTCCATGGCCACGGCGGCGGCGGCGAAGCGGAAG
CCGGTGTTCGTCAAGGTGGATCAGCTCAAGCCCGTCACCAGCGGCCACACGCTCGTCGCCAAGGTGCTCAGCTCCAAGAC
CGTCCTCCAGAAGGCCCGCGCCGCTGGCGGCCCCGGCCCAGCCGCCAAGCCCACCAGGATCGCCGAGTGCCTCATCGGCG
ACGAGACCGGCTGCGTCCTCTTCACCGCCCGCAACGACCAGGGTACGATCTGTTCTCCTGCTTCTCTGTCGTAATCTGCC
CTCTTTTTTTGGCGTCATGCGCGA-GTACTCGTGACCGATAGACACATTGACTT--------------------------
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------------GACTTGAGATTCTCGCGCTCTGCGTACATCTTGGATTGGCACATGAAAGTACCGTATACTATGTTTTT
TTATCTGTTACTTATCACGGAGGTCCGTGTATGCGGCAGAACACATTTATGTTGTATTATGCTCCTAGAATCGGATTGTG
AAAAACTGAAGATATAAAA-CAAATCCAAAATACATCCCAAGTGGCAAGTGAACTGGAAAGTGT----------------
GTTTAATCCATCATGCAGTATAGTACTCCCTCTGTAAAGAAATATAAGAGCGTTTAGACAC-------------------
-----------------------------TTACTCGGGGAGTAAGTGTTTTTTGTGTGTGTATATTTGTGGAAGTGCGTA
TGAAACAGAAATGCCCTGGTTGCCTGTTTTTTTTTTGTTAAATTCTACTAAGTACTAGGAATATCTATCTTATTGAAAGC
TCTCTGTGCACTGAAAATGGAGCTCT-----TCCCTAAGTTCACCCGGGCTCATTTACCAATCAATTGTTATACAGGTTT
-ATTAGCTTGATACAGAGGCTTTAAGGCACAC------------------------------CTGGTCAAGTCGATTGGT
AGATTGTTGTTACATTATATGGTTAGACAGATCATGGTTCAAAAGAGTGTAAAATTGATTCACACTATGCTTTGATCATA
TTAATTTTGTATTATGTGCATCATGTTTTCCCGCTTATTTTATTGTTACTTATGGCAATAAGCATTAATGCATTATGCAT
AATTAAATGATCATATGACAAATCTACTTTGTATGCTTAGGAACAGGAA--ATTAAATCCGTACATAA---TATATTCCT
TTTATGCTTTACTGAAATTTGTTGATCCTCGACTCATGTGCTCGAGCACAAATGCTCTATCATAAATGCATGATTACATG
ACTGGTTTGATAAACATTGGTTCACTTTGGCGATATAACAAGCATATACCTTTTCACAGTTGATGTTTTGAAGCCTGGCA
ACACTGTCATTATCCGCAATGCAAAGATTGATATGTTCAAAGGTTCAATGAGGCTTGCTGTTGACAAATGGGGCCGTGTT
GAAGTAACTGAACCAGCAAGCTTCGGTGTAAAGGAGGACAACAATCTTTCACTTGTGGAGTATGAACTTGTCAATGTTGA
AGAGTGAAAATCACATCGATCTTAATCAGAAGAAGTGCTTTCCCAAGCCTGTTGGTCAAATCTACTTGTTGAGTTGTCTA
GAATGTGAAAGATGGATCTTCTGAGTTCATATTGGAATTGTTCACTCGAACTACCGCAAGTTCCTTCTTATCAAGCATTT
CTATCTATGAGTGATTGTTAGTTGCTGCAGCAGTTGTGTTTCTGAGAACAAATGTGATGTGCTGAGCAGTAATATACAAT
TTGATCTCCTAAATGGATTATGCACCTTTCAGCTTGCAATTTTTATTTTATTTTAAACACTGATGATATTAACATTTTGT
TCTTGTGATGATCAACACACTGATGTTGGATAGTGGC-TTGATACTACCCACAAAAGGAGGATTGTTGAGTTATGATTGG
GTGATGGAAAGAACCATATTTATATTCTCAACCGAAAATAATTATTTGAATTTGAAACAACATGTTTTCTACGAACTATC
AAAGCGCATGTGGCTTGCATCGCTCACAAACTTGAAAACTCCCTACTTATGGTATATATAACTAAAAATATATTAGTAGC
TTTGACCCAAAATTCATTCCTCTTATTTGTTTGGATGAGGCGGGGGGA----------------GGCATGGGTTTGTTGC
AAATGAGTGGCGGACAGGTGGGTCTTTATGCAAATATACCGCATCTTACTTCACATCACATGCATTAGATGGAGATCGAA
TGGTCAAAAGTGTCCCATGGC--A--CACCATCATCACCAAGGGCGCGCTTGGTAGTCTGCATCATTTTTTATGTATTTG
CATATGTGATTGAGGTCGGGCCTTGCTTAGGGCCAGTTCTTTTGGGATGCTTAAAAATTAAGCTGCCTCTTTCCAGTTTA
AGAAATAAACCTCCCTCTAAGTTTGTTGAGACTTCTATATTACTTATCCCATAATTAGTTTAGAAGAACAAGAGATGCGG
CTTATGAAAAAAGTTAGGGAGGGGA--GGCTTTTTTTAAGCTCCCAAAAGAACTAGCCCTTAGTGCTAAAATCCATGTTT
TGCACATATTTTGTTTGCCTGCATC---------
>chr3A_573
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-------------ATATGCTTGAAGAAAACCAGACGAAACGCAAGCCAAACGTCTAGAGCAGGGATTTGTCACTGAAAGA
AAAGAAATGCGGCTAGTACTAGCAGCGTAGCCG----------GTAGGCAATCACGGCAAGCAGGCTATATATTCCGCAC
TGACGGACTGGTGTGGCTTTTTCAGTTTTCACCTTTTTGGAAAAGGAGAAACGGATAAGCACCATTTGACTATCTTGCCA
CGCTATTCGCCCTTCC-CCTCACAATGGTAAGTAACGCCTAATTTAACGACTCCTCCGCATCATTAGTGGCCTCCTCGAT
CGCAGGCTGAGACTCGCGCAACCTTCCCATCCCGTATTAAACTCGCCCC-ATCCCATCTAGGGTTTGGCCCTCCCAAAAG
ACCCGCGACCCCCTTAATCCCTCTCCCAACCCTTATCTGCATCCCTCCCCATGGCCACGGCGGCGGCGGCGAAGCGGAAG
CCGGTGTTCGTCAAGGTGGACCAGCTCAAGCCCGTCACCAGCGGCCACACGCTCGTCGCCAAGGTGCTCAGCTCCAAGAC
CGTCCTCCAGAAGGCCCGCGCCGCTGGCGGCCCCGGCCCGGCTGCCAAGCCCACCAGGATCGCCGAGTGCCTCATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGATTTGAGATTCTCGCGCTCTGCATACATCCTGGATTGGCACATGGAAGTACCGTATACTATGTTTTT
TTATCTGTTACTTATCACGGAGGCCTGTGTATGCGGCAGAACACATTTCC--TGTATTATGGTCCTATAATCGGATTGTG
AAAAAGTGAAGATATAAAA-CAAATCCAGAATACATCGCAAGTGGCAAGGGAACTGGAAAGTGTTTATGTGCTGTAAAAA
GTTTATTCCATCATGCAGTATAGTACTCCCTCTGTAAAGAAATATAAGAGTGTTTAGACACCTACTTCAGATCACTACTT
TAGTGATCTATAAACAGTCATATATTTCTTTACTCAGGGAGTAAGTGTTTTTTGTGTGTATATATTTGTGCAAGTGCGTG
TGAAACAGCAATGCCCTGGTTGGCTGTTTT------------------------------------ATCTTACTGAAAGC
TCTCTGTGCACTGAAAATGGAGCTCT-----TCCCTAAGTTCACCCGGGCTCATTTACCAATCAATTGTTATACAGGTTT
CATTAGCTTGATACAGAGGCTTTAAGGCACAC------------------------------CTGGTAAAGTCGATTGGT
AGATG------------TATGGTTAGACAGATCATGGTTCAAAAGAGTGTAAAATCGATTCACACTATGCTTTAATCATG
TTAATTTTGTATTATGTGCATCATGTTTTCTCGCTTATTATATTGTTACTTATGGCAATAAGCATTAATGCATTATGCAT
AATTAAAGGATCATATGACAAATCTACTTTGTATGCTTAGGAACAAGAA--GTTAAATCCTTACATAA---TATATTCCT
TTTATGCTTTACTGAAATTTGTTGATCCTCAACTCATGTGCTCGGGCACAAATGCTCTACCATAAATGCATGATTACATG
ACTGGTTTGATAAACATTGGTTTACTTGGGCGATCTAACAAGCATATACCTTTTCACAGTTGATGTTTTGAAGCCTGGCA
ACACTGTCATTATCCGCAATGCAAAGATTGATATGTTCAAAGGGTCAATGAGGCTTGCTGTTGACAAATGGGGCCGTGTT
GAAGTAACTGAACCAGCAAGCTTCGGTGTAAAGGAGGACAACAATCTTTCACTTGTGGAGTATGAACTTGTCAATGTTGA
AGAGTGAAAATCACATCGATCTTAATCA---GAAGTGCTTTCCCAAGCCTGTTGGTCAAATCTACTTGTTGAGTTGTCTA
GAATGTGAAAGATGGATCTTCTGAGTTCATATTGGAATTGTTCGCTCGAACTACCGCAAGTTCCTTCTTATCAAGCATTT
CTATCTATGAGTGATTGTTAGTTGCTGCAGCAGTTGTGTTTCTGAGAACAAATGTGATGTGCTGAGCAGTAATATACAAT
TTGATCTCCTAAATGGATTATGCACCTTTCAGCTTGCAATTTTTATTTTATTTTAAACACTGATGATGTGAACATTTTGT
TCTTGCGATGATCAACACACTGATGTTGGATAGTGGC-TTGATACTACCCACAAAAGGAGGATTGTTGAGTTATGATTGG
GTGATGGAAAGAACCATATTTGTATTCTCAACAGAAAATAATTATTTGAATTTGACACCACATGTTTTCTACGAACTATC
AAAGTGCATGTGGCTGGCATCGCTCATAAACTTGAAAACTCCCTATTTAT---------------------ATTAGTACC
TTTGACCCAAAATTCATTCCTCTTATTTGTTTGGATGAGGCGCGCGCGGGGGGGAGGGGTGGGGGGCATGGGTTTGTTGC
AAATGAGGGGTGGACAGGTGGGCCTTTATGCAAATATACCACATCTTACTTCACATCACATGCATTAGATAGAGATCGAA
TGGTCAAAAGTGTCTGATGGCAGA--CACCATCATCACCAAGGGCGTGCTTGGTAGTCTGCATCATTTTTTATGCATTTG
CATATGTGATTGAGGTCGGGCCTCGCTTAGGGCCAGTTCTTTTGAGAGGCTTAAAATTTAAGCTGTCTCTTCCCAGTTTG
AAAAACTAGCATCCCTCTAAGTTTGTTGAGACTTCTATATTAGTTATCCCATAACTAGTTTAGAAGAACAAGAGAGACGG
CTTATGGAAAAAGCTGGGGAGGGGGAGGCTTTTTATTAAGCTGCCAAAAGAATTGGCCCTTAGTG--------CATGGTT
TGCACATATTTTGTTTGCCTGCATCCTCCC----
>SNPs
------------------------S---S----------------------S----------------------------
--------------------------------------------------------------------------------
----------------S------------------------------------S--------------------------
-----S--------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------------------------S--------------------------S------------------------
-----------S-S--------S-------------------SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-------------------------------------------S------------------------------
------------------S----------SSSSSSSSSSSSSS-------------------------------------
--------------------------------------------------------------------------------
-------------------SSSSS-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS---------------------------
-----------------------SS-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------S-----S-----------------------
---SSSSS-SS-S--SSS-----S----------------------SS-S---------SSS------------------
------S------S-----S-----S---S---S---------S------------S-------SS---SSS-------S
------------S--S------S--SSSSSS-------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------S------------------SS---SSSSSSS-SSSSS----------------S
SSSS-------------------S--SSSSS----S-----S----S-S-SS----S------------S--S-----S-
----------S--S---------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
--------------------------S-S-S-S----S----------S----S----S--------------S-S----
-------S-----------------------S--------S---SS-SS-SS-----------------S----S-----
---------S------SS-------------------------------SS----------------SSSS---S-----
-----------------S------------------------S---------------S-----------------SS--
----S----S--------------------------------------------SS------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SS----------------------------------
-------------------------------------S-----------------------------------S------
-------------------------------------------------------------S----------------S-
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-------------S----
------------------------SS------------------------------------------------------
-----------S--------------------------------------------------------------------
S------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--SSSS
>forward_683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGCGTACTACTGCTAGCTGC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1947
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGTGCTCCCGAAGTTTACCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_1491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GCGCATACAACCTGGATTGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_3386
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACACCATCATCACAAGGGCG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
