>input_sequence_53760
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----ATGATCAACAGGCGGACAGCTACCAATGACAAGCTGTGCAAGCTGGATATGTTGTGCATAAAGATCAATAGCGCAG
TTGAGGCATCTAAGAAGCACAGAATCACCGGGACCTATCTTCTCAAGTGGCAGGAGAAGCTGAAGGAAGCTGGCATAGAG
GGTGATGAGGTACTTTTCGACTTCCGATGGCGAGCCTTGACCGAAGCAAGAAATAAGATCAACCAAAATATAGGCACACT
CGGTCCTCTAACTTACACAAAGATTGTTGTGTCAAGTATTGTAAATTACTTCCAAAATGCTACCAAGTTGCTCCTCTCAG
CCAACAAGGATGTGCAGAAGTTGAACAGCACAGTAGAAATGTTGGAGAAGCTATCGGCAGACAATGGGGCGTTTTTGAGA
TTGCTTGAGCTTCAGGTTTTGGCAGTAGAGGAGCATGCACCTGCAAAAAGGAAGAAACTGGATATATCGGGGAAGCCATC
GGCAGATAATGAATTCTTGAGATTGGTTGAGATTAACGTTTACTCTCAGCCGTGCAAGGATCAATTGCAACAGCTTTACC
CTATCATT---GCGACACAGATCCCCTCTTTTGCTGCAGGTTGCTACATTTTTTGTGATGCGGCATGGAAGGTTGACGGA
AATGCTCAATTGGCTCCTGCTGGGATTGGGATTTATATTCAGCTAGATAATAATCAGCATTTCAAACAGCTACATATTGC
AGCCATGTCCCCACCTGCTGCATCTGCCC-TTCAGGCTGAAGCTTTAGCTCTTCTTCTTGCTACAAAATTAGCTGATGTT
ATCCAGATACAAGAACCCCAGTACTTCACAGATTGTCAGGTCTTGGCTCATGCGATTTCCACCAACAACATCTTATCTAC
TCCAGGTCATTGGGAGATCAGGCCGCAGTTGGTGACAATACAGTCTTCCTCTTCTTTTCAAGCAAATAGAGTCAACCACA
TCTCCGGAAGCTTGAATGTTAAAGCTCATCATTTAGCTAGATTAGCTACAAGAATTAACTCTACATCTCTAGCTATCAGA
TGCCTATGTCAGGATGTAGGTCTTTGTCCAGGCAGAGATATCCTCTCTGATCTTTCTGTGAATCCTTTCATGCTTCTTTC
TGTAAAGTGTTGTTGAGTTCAATAAAATCTTTCTGTTCAAGAAAAAAACGTTTTAACAGGGGAGGAGCATGCACCTGCAA
AAATAAAGAAATTGGATATGTCGGAGAAGCCATCGACAAAATATGAGGAGTACTTGAGATCGGTTGAGCTTGAGATTTTG
ATAGGGCATGAGCATATGCACCTGCAAAAAGGAAGAAACCAGAGATGTTGGAGAAGCCATCGGCAAATAATGAGTTCTTG
A-------------------------------------------------------------------------------
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------------------------------------------------------
>chr3A_1_TraesCS3A01G412000
TCATAGATAAGGCTAGTCATAGTGGAAGTAACTTAGAGTAGTGTCATGCATATGACATTAGCCGAAGTTACTATCTTCAT
AATGCAAAATAACATAATACTAGTATCTTAGATGCTTTCATTTATTAGCTTGTAGACTCATTTTATCTTGGAAATTGCTA
CGTTACAGTAACATATTATGTTACCACCTTTCATTAATTACTTGCCACATAAGCAAAAATTTCTTGGAGTACACTATGTT
ACTAGCTAAGTTACTCCCACTATGACTAGCCTAAGTGGAACAACATGGTACTCCAATCTCGAAGAAGGTGCATAACTTGC
TCATTGGAGCATCTATTGGACCAAAGCATGAGGTCGTCGGCAGCCGAGTGGCATACGAGGTTGATCGGTTGAAGTTTATT
CCGAAAAGCTTTTGCATG--------------------------------------------------------------
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----------------------------GAAACTGAACGTGTGGATTGAAATTCCGGCACTTGACGACTGACACAGATGC
CAAATGTAATACTACTTGACTTGTAATACCGCTTTAGGAATA--TTTGCCCTGACTCTATGTTGGGAGGAAAAGAGAAGA
CCTTG--------ATTGGTTATTGACATTTCCTGCAGAATGTAGTGCAACTAAGTTGTCTGTGCGAAGTTTCCAGCCTCA
TTTCATCCATAAC-CCTTAGCCGGTAAAAACTAT-----GCAGAGCAA-GGCCTTACTTCCAATCAATTTTCAGTATCAA
GGGATATCTCTAGGG-GGCAAGTGGATGA---------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------CACAAACTATGCCACAGATCACCTCTT---GTCCATCCATTTTGGCTTTCTCG
CATCTGCTACAATTGGGCTATCTTAATTAAATTAAACCTCTAAGAGATGATTAAACACC--------TGCCTACTGCTAT
ATATCCACTATCCAGTATAACCCCTTATGGCCTTGATCATCC-------TTTAGTCTGTTCTAGGCTCTAGCTATCCATA
CAAGTACATTAAGCAATGGCAGGACAAGTTGTCTCTGCACTGATCAGCGAGATCACAAGCAGGGCCATCTCCAAGGTAAT
TGGAATGATCAACAGGCGGACAGCTACCAATGACAAGCTGTGCAAGCTGGATATGTTGTGCATAAAGATCAATAGCGCAG
TTGAGGCATCTAAGAAGCACAGAATCACCGGGACCTATCTTCTCAAGTGGCAGGAGAAGCTGAAGGAAGCTGGCATAGAG
GGTGATGAGGTACTTTTCGACTTCCGATGGCGAGCCTTGACCGAAGCAAGAAATAAGATCAACCAAAATATAGGCACACT
CGGTCCTCTAACTTACACAAAGATTGTTGTGTCAAGTATTGTAAATTACTTCCAAAATGCTACCAAGTTGCTCCTCTCAG
CCAACAAGGATGTGCAGAAGTTGAACAGCACAGTAGAAATGTTGGAGAAGCTATCGGCAGACAATGGGGCGTTTTTGAGA
TTGCTTGAGCTTCAGGTTTTGGCAGTAGAGGAGCATGCACCTGCAAAAAGGAAGAAACTGGATATATCGGGGAAGCCATC
GGCAGATAATGAATTCTTGAGATTGGTTGAGATTAACGTTTACTCTCAGCCGTGCAAGGATCAATTGCAACAGCTTTACC
CTATCATT---GCGACACAGATCCCCTCTTTTGCTGCAGGTTGCTACATTTTTTGTGATGCGGCATGGAAGGTTGACGGA
AATGCTCAATTGGCTCCTGCTGGGATTGGGATTTATATTCAGCTAGATAATAATCAGCATTTCAAACAGCTACATATTGC
AGCCATGTCCCCACCTGCTGCATCTGCCC-TTCAGGCTGAAGCTTTAGCTCTTCTTCTTGCTACAAAATTAGCTGATGTT
ATCCAGATACAAGAACCCCAGTACTTCACAGATTGTCAGGTCTTGGCTCATGCGATTTCCACCAACAACATCTTATCTAC
TCCAGGTCATTGGGAGATCAGGCCGCAGTTGGTGACAATACAGTCTTCCTCTTCTTTTCAAGCAAATAGAGTCAACCACA
TCTCCGGAAGCTTGAATGTTAAAGCTCATCATTTAGCTAGATTAGCTACAAGAATTAACTCTACATCTCTAGCTATCAGA
TGCCTATGTCAGGATGTAGGTCTTTGTCCAGGCAGAGATATCCTCTCTGATCTTTCTGTGAATCCTTTCATGCTTCTTTC
TGTAAAGTGTTGTTGAGTTCAATAAAATCTTTCTGTTCAAGAAAAAAACGTTTTAACAGGGGAGGAGCATGCACCTGCAA
AAATAAAGAAATTGGATATGTCGGAGAAGCCATCGACAAAATATGAGGAGTACTTGAGATCGGTTGAGCTTGAGATTTTG
ATAGGGCATGAGCATATGCACCTGCAAAAAGGAAGAAACCAGAGATGTTGGAGAAGCCATCGGCAAATAATGAGTTCTTG
AGGTCGGTTGAGCTTGAGATTTTGATGGGGGGGAGCATGCACATGCACAAAGGAATAACTCCAAGATGTCGGAGGAGCCA
TCGGCAGTTAATGAGTTCTTGAAATTTGTTGAGTTTGAGGTTTTGATGGAGGAGGAGCATGCATCTGCAAAAAGGAAGAA
GCTGGAGATGTCAGAGAAGCCATCTGCAGATAATGAGGAGTTCTTGAGATTGGTTTTGACGGGTGAGGAGCATGCACCTG
CATAGGATAAGAAACCAGTGGTTATATGTGACAGTTCATTGTCGCAAAAGGAAACACATCAACATTCGAACAGGAAGAGG
TGACTTGACTGTATAAATGACAACACCAAGATTATATGTAGCGAAGCGTGAAAAGGGCAGCACCAGTGAGACAGTGGCAA
TTCCATGTACAAGCTGTCGGGTCAGTTGACCCCCCAGTTTTTTTCT-AGAACACCTCTATCCTTTTGATATTTGGACAAA
GTTTGAAGGATTTGCTTGAGTTGACTCCACAAAGTTTTGGGTGGCAGTGCCAATGCTGTGAGATTTTTTCATTCTGGGT-
--GTAACTTTGTCATGCTTTCTGATTAAAGCTGTTGCAGTTTATAAATTTGGTACTGAAGCAATTTATGTTCCCTGTTAA
AAATTTGATTGGTTTTGGTTTTGAAACTGTATATGGATATACAATATGCATTGCATAGGTACTTTTAGAATTTCTTCATG
CTTGTATACCAGATTTTCACGCATTTGCAACATCTGTTGTATGCATGGCCATATATTCCCACCCTCAAATGACGGTTGCC
GAGATCTCCAAAATATCCAAAGCTTGTGCTGAATCATCAAAAGGC---------GGTCAGTTTTATTCTTGAGAACGTGT
AAACTACAAGGATGCCTTTCAGTTTTAGCGCAGATACCAACCATATGTCATTTGTTTGTTTCCAACTTTTGTCTTTGGCA
TTCAGAGCGATTAAAACAATGGTAACAACAACTAAATTGTCTTTTCTCTCTAAC
>chr5D_413
AGCCTCGTTTCATCCGTGCCCATTAGCCGGTAAAAACTAGCAGAGCAAAGCCTTACTTACAATCTAGTTTCAGTATCAGT
GAATATCTCTATGGGGGTAAGTGGATGACACAAACTATGCCACATATCACCTCTTTTTGTCCATCCACTTCGGTTTTCTT
GTATCTGCTACAATTGGGCTATCTTAATTAAATTAAACCTCTAGGATATGATTTAAACAGCTGGCTAGTGGCTACTGCTA
TATAGCCACCATCCAGTATAACCCCTTCTCATCCTTTAGAGTTTAGTCTGCTCTAGGCTCTAGCTATCCAAACAAGTCCA
GCAAGCAATGGCAGGACAAGTTGGGTCTGCAGTGGTTAGCGAGATCACGAGCAGGGCCGTTTCCAAGGTAACGGGAATGG
TCAACAAGCAGTCGGCTGTCGATGAGCAGCTGCGCAAGCTGGAGATGATGTGCATAAAGATCGACAGCATGGTTGAGGCA
TCTGAGAGGCATAGTATCACTGGTAACTATCTGCTCAAGTGGCAGGAGAAGCTAAGGGACGCTGGCACATTGGGTGACGA
GGTAATTTTTGACTTCCGATGGAGAGCCTTGAACAAAGCCAGCAAGAGCATCAACTATAAGATAGACACACTCAGTGCTC
TGGCTTACACAAAGATTGTTGTGTCAAGTATTGTAGATTACTTCCACAATGCTGCCAAGACGCTACTCTCAAGCAATGAT
GATGTGCAGAAGTTGAACAGTACAGTGGAGATGTTGGAGAAACTATTGGCAGATATTGGTCAAGCTCTAGCAGGTGCCTG
CGAAAGAGAAGAAACTAGCGATGCCGAAGAAGCTATCGGTAGATAATCAGGAGTTCTCGAGATTGGTTGAGCTTGAGGTT
TACATGGTGGAGGACCACACACCTGCGAAATGGAAGAAACCATTTGTTATATGTAACCATCCATTGTTGTAAAAGGAAGC
ACATCAACATTAGAACATGAAGAGAGCACTTGACTCCATCAATATGATAGGGAGCGTAAAAAGGGTAACACCTGTGAGAT
TTTTTCGTTATGGACTGTGTAACTATTTCATGTTTTCAGAATAAAGTTGTTACAGCATATACATTCGGTACTGAAGCAAT
TTCTGTCCCTGTTAAAGTTCGATAGATTGTGTCAAAATTTTATATGGATAACCAAATATGCATTCCCTGTATTTTAGAAT
TTTTGCACGTTTATATACCCAATTTTCCCGCATTTGGAAATTCTGTTGCATGTTTGACAATATTATTATCACCCTCAAAT
AACAGTTTCTGAGATCTCCAACATCAATAGGACTTACCTAGCAATTCTTTTTATTCTTGAGAATGTGTCATGCCAGTCTC
TACAGTTCTGCACGTACTATGGAGTATGGACATACCGGTCTAGGGATGTGCAATGTTTAAGCAGCTTGGTATTGTTGTGT
CCGTCAAATCCATGTTGTTTTCTTTTCTTAGTGCTGGCCGACCTGGCTTAGGGTGACATCAACTATGTGCACGCCTAGTT
TGTCTCGCTGACTCCCTAATTTATCTCACTACTTAAGATGGCCACTCAAAACAATTATTTAATTTTATGCATTCTGAGAC
TTGACAGGCTCTGGTCAGTAACGTACCTTGTTTGAGCTAGCCGTGGCACAAGAAGTTCTCTAAATAATGAGGCGCCCTTG
GTTTTCTAAGCATATATTTTCAGAAGAGAGTTCTCTAAATATTTCTCAAATAAATGTGGAGAAATGGGACGACCACTTCC
TTCTTCAACCCCATGTTCCTAACGTTGCCTTTTTGCCCGCTGAAGCATGGCATGGCAGCACCCTTCTTGGTTGAAACCAA
TCTGTGAATCACAAATTCCATGACCAGAAACCATCCTTAAAGAAACTGAACCACACCGGTAAAGGACCATGCTAAAGATA
CTTCCTGTTTCATACTGCATATGCATTAGAAACTGAACATGTGGACTGGAATTCCGGCACTTGCCAACACGT--TGGTGC
CAAATGTAATAAT---TGACTTGTAATGCTGACTCTGGAATATTTTTGCCCTGACTCTATGTAGGGAATAGAAGAGAATA
CTTTGG--------TTGGTTCTTGACATTTCCTGCATAATCTAGTGTAACTAAGCTGTCTGCGCGAATTCCCCAACCCCA
TTTCATCCATTCCACCTTGGCCGACACAAACTAT-----GCAAGCAAGGCCTCTTACTCCCAATCAATTTTCAGTCTCAG
TGAACATCTCTAGGGTGGTAAGTGGATGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CAGAAACTATGCCACAGGTCACCTCTTTTTCTCCATTCATTTCTGTTTCCTTG
TATCA-CTACAATTGGCTTATCA----TAAATTAAAACTCTAGGGGATTATTAAACAGC--------TGACCACTGCTAT
ATATCCACTATCCAGTATAATCCCTTC---------TCATCC-------TTTAGTCTGA-------TCTAGCTATACATA
CAAGCTCATTAAGCAATGGCAGGACAAGTTGGCTCTGTAGTGATCAACGAGATCACAAGCAGGGCCATCTCCAAGGTAAT
TGGAATGATCAACAAGCAGACGGCTATCGATGACAAGCTGCGCAAGCTGGACATGCTGTGCATAAAGATCAATAGCACAG
TTGAAGCATCTAAGAAGCACGAAATCACCGGGACCTATCTACTCAAGTGGCAGGAGAAGCTGAAGGAAGCTGGCATAGAG
GGTGATGAGGTACTTTTCGACTTCCGATGGCGAGCCTTGACCGAAGCCAGCAAGTGCATCAACCATAATATAGGTACACT
CGGTCCTCTAGCTTACACAAAGATTGTTGTGTCAAGTATTATAAAGTACTTCCACAGTGCTGCCAAGATGCTGCTGTCAA
CCAACAAGGATGTGCAGAAATTAAACAGCACAGTGGAATTGTTGGAGAAGCTATCGGCAGATAATGAGGCGTTCTTAGGA
TTGGTTGACCTTCAGGTTTTGACAGTAGAGAAGCATGCTCCTGCAAAAAGGAAGAAACTGGAGATGTTGGAGAAGCCATC
GGCAGATA------------------------------------------------------------------------
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------------------------------------------ATCAGGTGTTCTTGAGATCGGTTGAGCTTG--------
------------------------CAAAAGAGAAGAAACCAGAGATGTTGGAGAAGCTATCGGCAGATAATCAGTTCACG
AGATCCATTAAGCTTGAGGTTCTGAATGGGGAGA----------------------------------------------
-------------------------------------------------------AGAATGCTCCCGCA-----------
--------------------------------------------------------------------------------
-----------------------------------------TCACAAAAGGAAGCACATCAACATTCGAGCAGGAAGAGA
ACACATGACTGTATACTTGACTCCATGAAGGTTATAGTGAGCGT------AAAAGGGCAGCGCCTGTGAGACAGCAGAAA
TTCCATGTACAAGCTGTAGCTTTTG-------------------CTAAAA-TACCTCCATCCTTTTGATACTTGAACAAA
GTTTGAAGGGTTAGCTTGAGTTGACCCTACATAGTTTTGGGTGGCAGTGCCAATGCTGTGAGATATTACCATTCTGGGTT
GTGTAACTT--TCTTGCTTTGTGATTACAGCTGTTACAGTTTACAAATTTGATACTGAAGCATTTTATGCTCCCTGTTAA
G--TTTGATTGATTTTTGTTTTGAAATGGTAT--GGATACA-AATATGCATTTTGTAGCTACTTTTAGAACTTTTGAATG
TTTGTA-ACCCAACTTTCACGCATTTGCATCAACTGTGGCATGTTTGACCATATATTCCCTCCCTGAAACAACAGTTGCC
AAGATCTCC-AAATATCCAAATCTTGTGCTGAATCATCTAAAGGACTTACCTATGGTCCTTTTCATTCTTGAGAATGTGT
GAACTGTAAAGATGCCTTTCAGTTTTAACGCAGATACCAACCATACGTAATTTGTTTGTTTCCAACTTTTGTCTCCAGCA
TTCAGCGCGATTAAAACAATGGTGACAGCAACTAAGTTGTCTTTTCTTTCTAAC
>chr5A_413
TGCAT---------------------------------------------------------------------------
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--------------------------TAGAAACTGAACATGTGGACTGGAATTCCGGCACTTGCCAAGGTGT--TGGTGC
CAAATGTAATACT---TGACTTGTAATGCTGACTCTGGAATATTTTTGCCCTGACTCTATGTAGGGAATAGAAGAGAATA
CTTTGG--------TTGGTTCTTGACATTTCCTGCATAATCTAGTGTAACTAAGCTGTCTGCGCGAATTCCCCAACCCCA
TTTCATCCATTCCACCTTGGCCGACACAAACTAT-----GCAAGCAAGGCCTCTTACTCCCAATCAATTTTCAGTCTCAG
TGAATATCTCTAGGGTGGTAAGTGGATGG---------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------CAGAAACTATGCCACAGGTCACCTCTTTTTCTCCATTCATTTCTGTTTCCTTG
TATCA-CTACAATTGGCTTATCA----TAAATTAAAACTCTAGGGGATTATTAAACAGC--------TGACCACTGCTAT
ATATCCACTATCCAGTATAATCCCTTC---------TCATCC-------TTTAGTCTGA-------TCTAGCTATACATA
CAAGCTCATTAAGCAATGGCAGGACAAGTTGGCTCTGTAGTGATCAACGAGATCACAAGAAGGGCCATCTCCAAGGTAAT
TGGAATGATCAACAAGCAGACAGCTATCGATGACAAGCTGCGCAAGCTGGACATGCTGTGCATAAAGATCAACAGTGCAG
TTGAAGCATCTAAGAAGCACGAAATCACCGGGACCAATCTACTCAAGTGGCAGGAGAAACTGAAGGAAGCTGGCATAGAG
GGTGATGAGGTACTTTTCGACTTCCGGTGGCGAGCCTTGACCAAAGCCAGCAAGAGCATCAACCATAATATAGGTACACT
TGGTCCTCTAGCTTACACAAAGATTGCTGTGTCAAGTATTATAAAGTACTTCCACAGTGCTGCCAATATGCTGCTCTCAA
CCAACAAGGATGTGCAGAAATTAAACAGCACAGTGGAAATGTTGGAGAAGCTATCGGCAGATAATCAGGTGTTCTCAGTA
TTGGTTGAGCTTCAGGTTTCGACAGTAGAGAAGCATGCTCCTGCAAAAAGGAAGAAACTGGAGATGTTGGAGAAGCCATC
AGCAGATA------------------------------------------------------------------------
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------------------------------------------ATCAGGTGTTCTTGAGATCGGTTGAGCTTG--------
------------------------CAAAAGAGAAGAAACCAGAGATGTTGGAGAAGCTATCGGCAGATAATCAGTTCACG
AGATCCATTAAGCTTGAGGTTTTGAATGGGGAGA----------------------------------------------
-------------------------------------------------------AGAATGCTCACGCA-----------
--------------------------------------------------------------------------------
-----------------------------------------TCACAAAAGGAAGCACATCAACATTCGAGCAGGAAGAGA
ACACATGACTGTATACTTGACTCCATGAAGGTTATAGTGAGCGT------AAAAGGGCAGGGCCTGTGAGACAGCAGCAA
TTCCATGTACAAGATGTAGATTTTG-------------------CTAAAAATACCTCCATCCTTTTGATACTTCAACAAA
GTTTGAAGGGTTAGCTTGAGTTGACCCCACATAGTTTTGGGTGGCAGTGCCAATGCTGTGAGTTCTTTCCATTCTGGGTT
GTGTAACTTTGTCTTGCTTTCTGATTACAGCTGTTACAGTTTACAAATTTGATACTGAAGCAATTTATGCTCCCTGTTAA
A--TTTGATTGATTTTTGTTTTGAAATGGTATGTGGATACA-AATATGCATTTTGTAGCTACTTTTAGAACTTTTAAATG
TTTGTA-ACCCAACTTTCACGGATTTGCATCAACTGTGGCATGTTTAACCATATATTCCCTCCCTGAAACAACAGTTGCC
AAGATCTCC-AAATATCCAAATCTTGTGCTGAATCATCAAAAAGACCTACCTATGGTCCTTTTTATTCTTGAGAATGTGT
AAACTGTAAAGATGCCTTTCAGTTTTAATGCAGATACCAACCATACGTAATTTGTTTGTTTCCAACTTTTGTCTCCAGCA
TTCAGCGCGATTAAAACAATGGTGACAGCAACTAAGTTGTCTTTTCTTTCTAAC
>chr5A_413
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------------TGCATG--------------------------------------------------------------
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----------------------------GAAACAGAACGTGTGGATTGAGATTCCGGCACTTGACGGCCGACACTGGTGC
CAAATGTAATACTACTTGACTTGTAATACTGCCTTAGGAATA--TTTGCCCTGACTCTATGTTGGGAGGAAAAGAGAAGA
CCTTGATGGCTTGATTGGTTCTTGACATTTCCTGCAGAATTTAGTTTAACTAAGCTGTCTGTGCGAAGTTTCCAGCCTCA
TTTCATCCATACC-CCTTAGCCGGTAAAAATAAAAACTAGCAGAGCAAAGGCCTTACTTACTATCAATTTTCAGTATCAG
TGAATATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCACAAACTATGCCACATATCACCTCTTTTTGTCCATCCACTTCGGTTTTCTTG
TATCTGCTACAATTGGGCCATCTTAATTAAATTAAACCTCCAGGTGATGATTTAAACAGCTGGCTAGTGGCTACTGCTAT
AAATCCACTATCCAGTATAACCCCTTC---------TCATCCTTTAGAGTTTAGTCTGCTCTACGCTCTAGCTATCCATA
CAAGTTCAGTAAGCAATGGCAGGACTACTTGTGTCTGCAATGGTTAGCGAGATCATGAGGAGGGCCGTTTCCAAGGTAAC
AGGAATGGTCAACAAGCAGTCGGCTGTCAACGAGAAGCTGCGCAAGCTGGAGATGCTGTGCATAAAGATCGACAGCATGG
TTGAGGCATCTGAGAAGCATAGTATCACTGGCAACTATCTACTCAAGTGGCAGGAGAAGCTAAGGGACGCTGGCACAATG
GGTGACGAGGTACTTTTTGACTTCCGATGGAGAGCCTTGAACAAAGCGAGCAAGAGCATCAACTATAAGATACACACACT
CAGTGCTCTGACTTACACAAAGATTGTTGTGTCAAGTATTGCAGATTACTTCCACAATGCTGCCAAGATGCTACTCTCAA
GCAATGACGATGTGCAGAAGTTGAACAGTACAGTGGAGATGTTGGAGAAA------------------------------
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--------------------------------------------------------CTATTGGCAGA-------------
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>chr5B_621
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TTTCATCCATTCC-CCTTAGCTGACGCAAACTAT-----GCAGAGCAA-GGCCCTACTCCCAATCAATTTTTAGTCTCAG
TGAATATCTCTAGGAGGGTAAGTGGATGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CAAAAGCTATGCTACAGGTCACCTCTTTTTCTCCATCCATTTCGGTTTCCTCG
TATG-GCTATAATTGGCTTATCC----TAAATTAAACCTCTAGGGGGGTATTAAACAGC--------TGACCACTGCTAT
ATATCCACTATCCAGTATAATCCCTTC---------TCACCC-------TTTAGTCTGA-------TCTAGCTATACATA
CAAGCTCATTAAGCAATGGCAGGACAAGTTGGCTCTGCAGTGATCAGCGAGATCACAACCAGGGCCATCTCCAAGGTAAT
TGGAATGATCAACAAGCAGACGGCTATCGATGACAAGCTGCGCAAGCTGGACATGCTGTGCACAAAGATCAACAGTGCAG
TTGAAGCATCTAAGAAGCACGAAATCACCGGGACCTATCTGCTCAAGTGGCAGGAGAAGCTGAAGGAAGCTGGCATAGAG
GGTGATGAGGTACTTTTTGACTTCCGATGGCGAGCCTTGACCAAAGCCAGCAAGAGCATCAACCATAATATAGGTACACT
CAGTCCTCTAGGTTACACACAGATTGTTGTGTCAAGTATTATAAATTACTTCCATAGTGCTGCCAAGATGCTGCTCTCAA
CCAACAAGGATGTGCAGAAGTTAAACAGCACAGTGGAAATGTTGGAGAAGCTATCGGCAGATAATGAGGAGTTCTCAGGA
TTGGTTGAGCTTCAGGTTTTGACAGTAGACGAGCATGGTCCTGCAAAAAGGAAGAAACTGGAGATGTTGGAGAAGCCATC
GGCAGATA------------------------------------------------------------------------
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------------------------------------------AT---GAGTTCTTGAGATCGGTTGAGCTTG--------
------------------------CAAAAGAGAAGAAACAAGAGGTGTTGGAGAAGCTATCGGCAGATAATCAGTTCACG
AGATCCGTTAAACTTGAGGTTTTGAACGGGGAGA----------------------------------------------
-------------------------------------------------------AGAATGCTCCTGCAAAAGTG-----
--------------------------------------------------------------------------------
--------AAGAAACCAGTGGTTATATGTGCCCGCCCATTTTCACAAAAGGAAGCACATCAACATTCGAGCAGGAAGAGA
CCGCATGACTATATACTTGACTCCGCGAATGTTATAGTGAGCGT------AAAAGGGCAGTGCCTGTGAGA--GCAGCAA
TTCCTTGTACAAGCTGTAGCTTCTG-------------------CT-AAAATACCTCCATCCTTTTGATACTTGAACAAA
GTTTCAAGGGTTAGCTTGAGTTGACCCTACATAGTTTTGGGTGGCAGTGCCAATGCTGTGAGATCTTTCCGTTCTGGGTT
GTGTAACTTTGTCTTGCTTTCTGATTACAGCTGTTACAGTTTATAAATTTGATACTGAAGCAATTTATGCTCCCTGTTAA
G--TTTGATTGATTTTTGTTTT-------------GATACA-AATATGCATTTTGTAGCTACTTTTAGAACTTTTGAATG
TTTGTA-ACCCAACTTTCATGCATTTGCATCAACTGTTGCATGATTGACCATATATTCCCTCCCTCAAACAACGATTGCC
AAGATCTCC-AAATATCCAAATCTTGTGCTGAATCATCAAAAGGACTTACCTATGGTCCTTTTCATTCTTGAGAATGTGT
AAACTGTAAAGATGCCTTTCAGTTTTAACGCAGATACCAACCATACGTAATTTGTTTGTTTCCAACTTTTGTCTCCAGCA
TTCAGTGCGATTAAAACAATGGTGACAGCAACTAAGTTGTCTTTTCTTTCTAAC
>chr5D_1518
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-----------------------------------------ACTCTCAGCCGTGCAAGGATCAATTGCAACAGCTTTACC
CTATCACT---GCGACATAGATCCCCAATTTTGCTACAGGTTGCTACATTTTTTGTGAGGTGGCATGGAAGGTTGACAGA
AATGCTCAATTGGCTCCTGCTGGGATTGGGATTTATATTCAGGTGGATAATAATCAACATTTCAAACAGCTACATATTGC
AGCCAAGTCG-CACCTGTTGCATCTGCTCTTTCAGGCTAAAGCTTTAGCTCTTCTTCTTGCTACAAAATTGGCTGGTGTT
ATCCAGATACAAGAACCCCAGTACTTCACATATTGTCAGGTCTTGGCTCATGCAACTTCCACCAACAACATCTTATCTAC
TCGAGGTCCTTGGAAGATTAGGCCGCAGTTGGCAACAATACATGCTTCCTCTTC---TCAAGCAAATAGAGTCAACCACA
TCTCCAGAAGCTTGAATGTTAAAGCTCATCATTTATCTAGATTAGCTACAAGAATTAACTCTATATCTCTAGCTATCACA
TGCCTATGTCAAGATGTAGGTCTTTGTCCAGGCAGAGATATCCTCTCTGATCTTTCTGTGAATCCTTTCACGCTTCTTTC
TGTAAAGTCTTGTTGAGTTCAATAAAATCTTTCTATTCAAAAAATAAAC-------------------------------
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------------------------------------------------------
>chr2D_1519
CTCTT---------------------------------------------------------------------------
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-----------------------------------------------AGCCGTGTAAGGATCAATTGCAGCAGCTTCATC
CTATCATTACGGCGACAAAGGCCCCCTCTTTTGATGCAGGTTGCTATATTTTTTGTGATGCGGCATGGAAGATTGATGGA
AACACTCAACTGGCTCCTGCTGGGATTGGGATTTATATTCAAGTGGATAATAATCGGCATTTCAAGCAGTTGCATATTGC
AGCCATGTCCCCACCTGTTGCAACTGCAC-TTCAGGCTGAAGCTTTAGCTCTTCTTCTTGCTACAAAATTGGCTAATGTT
ATCCAGATACAAGAGCCCCACTTCTTCACAGTTTGTCAAGTTTTGGCTCATGCCACATCAACCAACAACGTCTTACCTGC
TCGAAGTCACTGGGAGATCAGGCTGCAGTTGGCGACGATTCAAGCTTCCTCTTCTTTTCAAGCAAACAGGGCCAGCCACA
TCTCGAGAAGCTTGAATATTAAAGCTCATCATTTAGCTCGATTAGCTACAAGAATGAACTCTACATCTCTAGTTATCACA
TGCCTTTGCCAGGATGTAGGTCTTTGTCCAGGCAGAGATATCCTTGCTGATCTTTCCGTGAAACCTTTCACGCTTCTTTC
TGTAAAGTGTCGTTGATTTCAATAAAATCTCTGTGTTCAAAAAAAAAC--------------------------------
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>chr2B_1519
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------------------------------------------CTCTCAACCGTGTAAGGATCAATTGCAGCAGCTTCACC
CTATCATTATGACGACCCATGTTTCCTCTTTTGATGTAGGTTGCTACATTTATTGTGATGCGGCAAGGAAGATTGGCGGC
AATGCTCAATAAGCTCATGTTGTGATTGGAAATTATATACAGGTGAATAATAACCAGCATTTCAAAAAGTTGCATATCGC
AACCATGTCCCCACCTACTGCATACCCCC-TTCAAGCCGAAGCTCTAGCTCTTGTTCTTTCTACAAAGGTGGCTATTGTT
ATCCAGCTACAAGATCCCCAGTTCTTCTCATATTGCCATGTCTTGGTTCAAGCAATTTCCACCAACATCTTAT---CTGC
TCTAGGTAATTGGGAGATCAGACCCATGTTGGCAACCATACATGTA---TCTTCTTTTCAAGCAAACAGGGTAAACCACA
TCTCCAGAAGCTTGAATGTTAAAGCTCGTCATTTAGCTAGATTAGCTACTAGAATTAACTCAACATCTCTAGCTATAAGA
TGCCTATGCCGTGATGTAGGTCTTTGTCCAGGCAGAGATATCCTCTCTAATCATTCTCTAATTCCTTTCA----------
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>chr4A_1543
GCAGCA--------------------------------------------------------------------------
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-------------------------------------------------------------------------CTTTACG
ATATCAAT---GTGACACAGATCCCCTCTTTTGCTGTAGGTTGCTACATTG-TTGTGATGCAACATGGAAGGTTGACATA
GATGCTTAATTGGCTCCTGCTGGAATTGGGATTTATATTTAGGTGGATAATAATCAGCATTTCAAATAACTACATATTGC
AGCCATGTCCCCACCTGCTGCATCTGCCC-TTCAGGCTGAAGCTTTAGCTCTTA---TTGCTACAAAATTGGCT-ATGTT
ATCTAGATACAAGAACCCCAGTACTTCACAGATTGTCAGGTCTTGGCTCATGTGACTTCTACCAACAACATATTATCTAC
CACAGATCATTGGGAGATCAGGCCGCGGTTGGCGACAATACAAGCTTCCTCTTCTT------------------------
--TCCAGAAGCTTGAATGTTAAAGCTCATCATTTAGCTAGATTAGCTACAAGAATTAACTCTACATCTCTAGCTATCAGA
TGCCTATGTCAGGATGTAGGTCTTTGTGCAAGCAGAGATATCCTCTCTGATCTTTCTGTGAATCTTTTCACGATTCTTTC
TGTAAAGTGCTGCTGAGTTCAATAAAGTATTTCTGTTAAAAAAAA-----------------------------------
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>chr7A_1643
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---------TTGGCTCCTGCTGGAACTTGGATTTATATTCAGGTGGATAATAATTAGCATTTCAAATAACTACATATTGC
AGGCATGTCCACACCTGCTGCATCTGCCC-TTCAGGCTGAAGCTTTAGCTCTT---CTTGCTACAAAATTGGCT-ATGTT
ATCTAGATACAAGAACCCCAGTATTTCACAGATTGTCAGGTCTTGGCTCATGCGACTTCTACCAACAACATATTATCTAC
CATAGATCATTGGGAGATCAGGCCGCAGTTGGCGACAATACAAGCTTCCTCTTCTTTTCAAGCAAATAGAGTCAATCACA
TCTCCAGAAGCTTGAATGTTAAAGCTCATCATTTAGCTAGATTAGCTACAAGAATTAACTCTACATCTCTAGCTATCAGA
TGCCTATGTCAGGATGTAGGTCTTTGTGCAAGCAGAGATATCCTCTCCGATCTTTCTGTGAATCTTTTCACAATTCTTTC
TGTAAAGTGTTGCTGAGTTCAATAAAGTCTTCCTGATGAAAAAAATAC--------------------------------
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>SNPs
----SSS-SSSSSSS--SSSSS-SSSSSSSSSSS-SSSSSSS-SSSSSSSSS-S--S-SSSSSSS----S-SS-S-SSS-
S-SSSSSSS--SSSSSS--SSS-S--SSS-S-SS--S-SSSSS--SSSSSSSSSSSS-SSSSS-SSSS-SSSSS--S--S
SSS-SSSS--SS--SSSSSSS-SSS-SS-SSSS-S--SSS--S-SSSSSS-SSS---S-SS-SSSSSSSSS-SSSSSS-S
SS----S-SSS-S-SSSSSSSSSSSS-SS-S-SSS-SSS-SSSS-SSS-S---S-SS---S-SSS-SSSSS-S--S-SSS
S--SSSS-SSSSSSSSSSSSSSSSSS-SSS--SSSS-S-SS--SSS-SSS---SSSSS-S--SSSS---SSSS-SSSSSS
S-S-S----SS---------------------------------------------------------------------
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--------------------------------------------------------------------S-----S-S---
-----------------------------S--S-----------------------------------------------
--------------------S-------------------S-----S-------S-------------------------
-----------S-------------------------------------------------------------------S
S-S---------------S-------------------------------------------------------------
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---------------------------------------------------------------------S--S-------
S-----------------------------------------S-S------------S-----------S----------
--------------------------SSSSSSSSSS----------------------S----S----------------
-----S---------------------------------S----------------------------------------
--------------S--S--------S-------------S----------S---S------------------------
----------------------------------------S---------------------------------------
-----------------------------------------------S--S--S-SS--------S--------------
------------------------------------------------------S------S-----S----S------S
----------------------------------S--------------------------S----S------S--SS--
---S-----------------S----------------S-----------------------S--S-S--S---------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
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------------------------------------------S-S-----------------------------------
----------------------------------------------------------------------S---------
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--------------------------------S---------SS------------------------------------
-----S--------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------------------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------S--------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----SS--------------------------S-------S-----S-----SS-
--S--S---S--------S------SS----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----SS--------SS-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS----------------------S-S-SS----S--S---------S---------------S---------S
SS--S----------SS----SS---S---S-----SSS----SSSSSSS-----------S--S---------SS----
-----------------S-SS--S-SSSSSSSSSSSSSSSSSSS----S--S-----S------------S---S-----
---------S--S------------S-----S--------------------------------S---S-----------
-------------S-------------S-------S---------------S-----------------S----------
-SS--------S----S---------SS----S------S-S----------SSS---S-----------S--S-SS---
S-----S---SS-S---------------S--S------S---SS--S------------S--------SS---------
S--------S-----------S----------------------S-------------SS---------------S----
-----SS--S-----------------S-----------------S--S-------------------------SSS---
-----S-----------------S---S-------S-----------S------
>forward_384
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--------------------------------------------CGAGTGGCATACGAGGTTGA----------------
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>reverse_3102
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-------------------------------------------------------------ACCAAGTTGCTCCTCTCAG
C-------------------------------------------------------------------------------
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>forward_3011
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-------------------------------GAGCCTTGACCGAAGCAAGA-----------------------------
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>reverse_4371
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--------------------------------------------------TGGTTTTGACGGGTGAGGAG----------
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