>input_sequence_53744
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-------------------------------------------------------ATGGCCTCCCAACGAGGGCCACC--
----GTCGCCGGCGCCAGTGG---------CTACCACCATCGCCATTACTGATATCGGCGACGACCTCCTCTGCGAGATC
TTCCTCCGCCTCCCCTCCCTCCCGAGCCTCGTCCGCGCCGCCCTAGCGTGCCGCGCCTTCCTCCACGCCGTCCGATCGTC
TCCCGCCTTCCGCCGCCGCTTCCGGGCGGTCCACCCGCCCCAAATCCTTGGATTCTTGAACG------C-----------
-AGGCATTCATTCCCTCATTCCCCTCGACGGCCGCTCCGACCGTGACCTAGCCGCGGCCGT---CCACGGCAGCGATTTC
CGCTTCATCCGGCTCCCGAAAGACAGAGACCAC------TCCAGGTGGGAGATCCTCAATGGCTGCCACG----------
-------------A------------CCGCTGCGGCTACGTCTTCCTCTGCAACGAGGACACC------AACCAGATAGC
TGCCTACAACCCCCTCAAGCGGGCGCTGTATATCGTCCCTTGCCCTCCCCAAGAGACATGCGA-------TCCCCACTGC
CATGATTTCCGCATCATCTTCTCCGAAGATGACCAGAGGTCGTTCCGTGTGGTCTGTGT------------------GCA
GCAGAAGCTGGATCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGAGTATCTCTTGGGTGGAT------ACCT
CGAC---GC---CGCAGCATGGGGACGATGGAGGCGACAACTGCGTGCTCTCGTCTTACACAGATA---CTGTGATGACC
GAATTTGATAGATTAGCCTACTGGAAAGACAAAAATACAGGGTATATTGTCGTGCTCAACACTGTGACGCTGCAATTATC
TCGAA---------TGGATTTGCCGCAGCCCTTGAAAGATAAAGACTCCACGCAATTTGAACTTGGCCGGACCAACGCTG
GGAAGCTTTGCATGGTTTGCGCAGATGGCTTCGGTGCCGACAAAACAATGATCGCGGTTTGGATTTGGAGAGCCGATGGT
GATGGTG------TTGACAAGTGGATGCAGCACAAGGTGTTCCCACTGAACATGTTTATTGACGTCACGGCGTGCTCAGC
GGAGTATGGTGTCATCACGGTGCAGGTTGTGGTGGTCATCGATGGATTTGTGTTCCTGTGTATTGATTTTGGCAGCCTTA
CCAAGTTCTT---CCTGTCTTTCTGCCTGGAAACGGAGAATGTAAACGAGTTCTTCAATCATACATTTCACAACGATATC
CATCCCTATATCATGGCGTGGCCTCCTTCATTGCTAAGCAACAAGGTGAGCACTTGCTTG-AAGATACCG-----AGTAA
ATTTCTTCAGACA--GTTTGGTCCATGTATTGTATGCAGTTAATTAGGTTATTTGAGAGTAATGAATTATCTCATAGCTC
TGAACATCTACGATCAGGTTGAAATTTTGCAAGTCTAG------------------------------------------
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>chr5A_1_TraesCS5A01G344400
TAGATAGTCTTAAATACAACAAAGCTGGATAAAGACTAATTGGCAGTGATAACATTACTTTGTTGCTACATGTTCCACTC
ATGTTATGATGGTGTGGACTTACCCCTGGAAGTTGTTTTTTTTAATGTATATTCACTAGACTCTTGGGCATAAACATTTA
CTAATACTATAGTTGTTAATATACACAATTGGTATGCGGCCAGTCAACTCCGCCAGTAGGGCTCACATCACCTTATTTTC
CTGGCCTATAGGCCAACCTTTTGTACACAACTTTCTTCATAGTTTTTGTTTTTTACTTTCCCCAAATCTTGAAAATTTGT
TATGAATTTCATATGTCCTTTTTTATGGGAACTTGCTGCTTTATTTAAACATCATCTACGACAACATCCAACACCAAAAC
ATCCGAGATATAACCCGGTGCAACACAAAACCAAGTCTTAGTACGTTTATTTAAGTGGCTGTGCAAACAACTAAAAAAAA
GTAGCTGTCCCTCGCCAAAACATGAGCAGCCATGTTACCAGCATAGTTTTAAATAGCCGGCTATAGCTGTTTGAGAGTGT
TGCCGCCAAATGATTTCATGTATAATTTGCCGCTATAGCCCCTCTATAACCCGCTGTAGCCCAGCTATAGCTGTTTTTAA
GGGTTGCCGCTAAATGCCATAGCCCGCTATTTAAAACATTGGTTAATTACCAGGCATGAATTTCATACAATGTCATAGTT
GAATCCACACTTCAGCCCAAACCCTGCTGAATTGCCC-------------------------------------------
---------------------------------------TAGATCGATCGGCTGTTGCGCGTGGGATCCAATGACTCTA-
-TGCGGTCGATCGAATCCACACTTCAGTCAAACCCAGCTG----------------------------------------
------------------------------------------------GAATTACCCTAGATCAGTCGGCTGTCGACGCG
TGGGAT---ATAATGACTCGACTCTGTAGGCGGCCGATTCGATCCATGCTTCAGCCGGCCCATGCGTAGCGCTTTTCCTT
TTCTCTTTCCCCCGAAACAAAAATCTGCCGCCGCCGTCCGAGATCTTGACAAGCCATGGCCTCCCAACGAGGGCCACC--
----GTCGCCGGCGCCAGTGG---------CTACCACCATCGCCATTACTGATATCGGCGACGACCTCCTCTGCGAGATC
TTCCTCCGCCTCCCCTCCCTCCCGAGCCTCGTCCGCGCCGCCCTAGCGTGCCGCGCCTTCCTCCACGCCGTCCGATCGTC
TCCCGCCTTCCGCCGCCGCTTCCGGGCGGTCCACCCGCCCCAAATCCTTGGATTCTTGAACG------C-----------
-AGGCATTCATTCCCTCATTCCCCTCGACGGCCGCTCCGACCGTGACCTAGCCGCGGCCGT---CCACGGCAGCGATTTC
CGCTTCATCCGGCTCCCGAAAGACAGAGACCAC------TCCAGGTGGGAGATCCTCAATGGCTGCCACG----------
-------------A------------CCGCTGCGGCTACGTCTTCCTCTGCAACGAGGACACC------AACCAGATAGC
TGCCTACAACCCCCTCAAGCGGGCGCTGTATATCGTCCCTTGCCCTCCCCAAGAGACATGCGA-------TCCCCACTGC
CATGATTTCCGCATCATCTTCTCCGAAGATGACCAGAGGTCGTTCCGTGTGGTCTGTGT------------------GCA
GCAGAAGCTGGATCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGAGTATCTCTTGGGTGGAT------ACCT
CGAC---GC---CGCAGCATGGGGACGATGGAGGCGACAACTGCGTGCTCTCGTCTTACACAGATA---CTGTGATGACC
GAATTTGATAGATTAGCCTACTGGAAAGACAAAAATACAGGGTATATTGTCGTGCTCAACACTGTGACGCTGCAATTATC
TCGAA---------TGGATTTGCCGCAGCCCTTGAAAGATAAAGACTCCACGCAATTTGAACTTGGCCGGACCAACGCTG
GGAAGCTTTGCATGGTTTGCGCAGATGGCTTCGGTGCCGACAAAACAATGATCGCGGTTTGGATTTGGAGAGCCGATGGT
GATGGTG------TTGACAAGTGGATGCAGCACAAGGTGTTCCCACTGAACATGTTTATTGACGTCACGGCGTGCTCAGC
GGAGTATGGTGTCATCACGGTGCAGGTTGTGGTGGTCATCGATGGATTTGTGTTCCTGTGTATTGATTTTGGCAGCCTTA
CCAAGTTCTT---CCTGTCTTTCTGCCTGGAAACGGAGAATGTAAACGAGTTCTTCAATCATACATTTCACAACGATATC
CATCCCTATATCATGGCGTGGCCTCCTTCATTGCTAAGCAACAAGGTGAGCACTTGCTTG-AAGATACCG-----AGTAA
ATTTCTTCAGACA--GTTTGGTCCATGTATTGTATGCAGTTAATTAGGTTATTTGAGAGTAATGAATTATCTCATAGCTC
TGAACATCTACGATCAGGTTGAAATTTTGCAAGTCTAGTCAGCTGTTTTTGATTTAATTCTAAGTCCAGTTACAATAACA
CTGATTTGCATATAGCACATAATACAAGTGTTAAATTGCAGATTGTATACACGGATCCAATATTTTAGTCCGATTATATG
ATGTAAGCATTGGCTAC----------------------------------------ATAATGCTCTGTAATTCTGATCA
CTATAAT--------GTGTCGGTGTAGCAAGTGTCTTATTTAGGG-----------TCTGTCTTCTAACATTGCTAAACA
AATCTGTCTTGTACAATTTTTGTAGGCTCTGTCGTGTATCATTTGAGTCCATAACCTTGCACAGGTTGCCTGCACAAACA
CTTGAATCCTTCCTTACTGACACTGAAATCATTTTATCTTTCAGGAGAATTCAGAAACCAACATTACTGGAGGCGATGCG
ACAGACGATGGTCCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GTGGGTACAGAAGAAACTCTCTCTGTTCTCGGTGGCGGAGAAAGCATCCAAACAATTCGT
GTACAGAGTCCCCTAAAGATCACAGTTTTACTCGAGAATAGAAATGTATTTAATGTATACTGTTCTTGAGGATTAACAGA
TTCAAGAGATTGTATCTTGAGGATAAGTGCCGAATTTGATGTCTACACTACAGCATGTCAACAGATTTCAGCAAATCCAA
TGGGTATCCATTCTTTTGTTTGAATTGTTAAGTTTGTTCTGTTCTGCTCCGTGCTCGTGTTCAAAAACCCCTCACATCAT
ATCAGGAGTGAATTCGAACCTAATAATCTTGGTGGTCATAAATAGTGAAACAATGCTA--GGTTCATCGCGACATGATT-
----------GAGTGACCCTTTTTTATTT----TTCGAGATGCTGAGAGTTACACTTGGTCACATGAGCTTAGTTT--TT
TTATTGCTTGTAATTTTAACTTTGAGAGAAGATTGCATCACTGCGTATACCAAAATGATTTATTAGTTTGAATGTTTCAA
ATGACTTTTGTTCTGCATCTAGTTGTCTCAATTGAGAATCAATGTATTCCTCAGCAGATTATCTTTATTTGCAAGAAACG
A
>chr5D_721
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GAATCCACACTTCAGCCAAAACCCAGGTGAATTACCCTTACCCTAGATCGGTTGGTTGTCGCATGTGTGATCCCGGTCGA
TCGAATCCACACTTCAGTCAAAACCCAGCTGAACTACCCTAGACCGGTCGGCTGTCGCGCGTGGGATCCAATAACTCTAC
GTGCGGTCGATGGAATCCACACTTCAGCCGAAACCCAGCTGAATTACCCTTACCCTAGATCGGCCGGCTGTCGCGTGTGG
TATCCCGGTCGATCAAACCACACTTCAGTCGAAAGTCGAAACCCAGCTGAATTACCCTAGATCGGTCGGCTGTCGACGCG
TGAGAT---ATAATGACTCGACTCTGTAGGCGGCCGATTCGATCCATGCTTCAGCCGGCCCATGCGTAGCGCTTTTCTTT
TTCTCTTTCCCCCGAAACAAAAATCTGCCGCCGCCGTCCGAGATCTTGACAAGCCATGGCCTCCCAACGAGGGCCAAC--
----GTCGCCGGCGCCAGTGG---------CCACCACCACCGCCATTACTGCTATCTGCGACGACCTCCTCTGCGAGATC
TTCCTCCGCCTCCCCTCCCTCCCGAGCCTCGTCCGCGCCGCCCTCGCCTGCCGCGCCTTCCTCCATGCGGTCCGATCGTC
TCCCGCCTTCCGCCGCCGCTTCCGGGCGGTCCACCCGCCCCAAATCCTTGGATTCTTCAACGGGCAAAC-----------
-AGGTATTCATTCCCTCATTCCCCTCGACGGCCGGTCCGACCATGACCTAGCCGCGGCCGT---CCACGGCAGCGATTTC
CGCTTCATCCGGCTCCCGAAAGACAGAGACGAGTCCAGGTCCAGGTGGGAGATCCTCAATGGCTGCCGCG----------
-------------A------------CCGCTGCGGCTACGTCTTCCTCTGCAACGAGGACACC------AACCAGATAGC
TGCCTACAACCCCCTCAAGTGGGCGCTGTATATCTTCCCCTACCCTCCCCAACAGGCATGCGA-------TCCCCACTGC
CTTGATTTCCACATCATCTTCTCCGAGGATGGCCAGAGGTCGTTCCGTGTGGTCTGTGT------------------GCA
GCAGAAGTTGGCTCGCTTCTCTGTCTTCTTATCGGATAGCAGGGAGTGGCAGAGTTTCTCTTGGGTGG------------
------------CGCAGCCTGGGTACGATGGAGGCGACAACTGTGTGCTCTCGTCTTACACTGATA---CTGTGATGAAC
GAATTTGATAGATTAGCCTTCTGGAAAGACAAAAATACAGGGTATATTGTCGTGCTCAACACTGTGACGCTGCAAATATC
TCGAA---------TGGATTTGCCGCAGCCGTTGAAAGATAAAGACTCCACGCAATTTGAACTTGGCCGGACCAACGCTG
GGAAGCTTTGCATGGTTTGCGCAGATGGCTTCGGTGCCGACAAAACAATGATCGCGGTTTGGATTTGGAGAGCCGATGGT
GATGGTG------TTGACAGGTGGATGCAGCACAAGGTGTTCCCACTGAACACGTTTATTGACGTCACGACGTGCTCAGC
GGAGTATGGTGTCATCGTGGTGCAGGTTGTGGTGGTCATCGATGGATTTGTGTTCCTGTGTATTGATTTTGGCAGCCTTA
CCAAGTTCTT---CCTGTCTTTCTGCCTGGAAACGGAGAATGTAAACGAGTTCTTCAATCATACATTTCACAACGATATC
CATCCCTATATCATGGCGTGGCCTCCTTCATTGCTAAGCAACAAGGTGAGCACTTGCTTG-AAGATACCG-----AGTAA
ATTTCTTCAGACA--GTTTGGTCCATTTATTGTATGCAGTTAATTAGGTTATTTGAGAGTAATGAATTATTTCATAGCTC
TGAACATCTACGATCAGGTTGAAATTTTGCAAGTCTAGTCAGCTGTTTTTGATTTAATTCTATGTCCAGTTACAATAACA
CTGATTTGCATATAGCACATAATTCAAGTGTTAAATTGCAGATTGTATACACGGATCCAATAATTTAGTCCGATTATATG
ATATAAGCATTGCCTAC----------------------------------------ATAATGCTCTGTAATTCTGACCA
CTATAAC--------GTGTCGGTGTAGCAAGTGTCTTATTTAGGG-----------TCTGTCTTCTAACATTGCTAAACA
AATCTGTCTTGTACAATTTTTGTAGGCTCTGTCTTGTATCATTTGAGTCCATAACCTTGCACAGGTTGCCTGCACAAACA
CTTGAATCCTTCCTTACTGACACTGAAATCATTTTATGTTTCAGGAGAATTCAGAAACCAACATTACTGGAGGCGATGCG
ACAGATGATGGTCCT-----------------------------------------------------------------
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--------------------ATGGGTACAGAAGAAACTCTCTCTGTTCTCGGTGGCGGAGAAAGCATCCAAACAATTCGT
GTACAGAGTCCCCTAAAGATCACAGTTTTACTCGAGCGTAGAAATTTATTTAATGTATACTGTTCTTGAGGATTAACAGA
TGCAAGAGATCGTATCTTGAGGATAAGTGCCGAATTTGATGTCTACAGTACAGCATGTCAACAGATTGCAGCAAATCCCA
TGCGTATCCATTCTTTTGTTTGAATTGCTAAGTTTGTTCTGCTCTGCTCCGTGCTGACGTCAAAAAAACCCTCGCATCAT
ATCAGATGTGAATTCGAACCTAATAATCTTGGTGGTCATAAATAGTGGAACAATGCTA--GGTTCTTCGTGACATGATTT
ATTACTCTGAGAGTGAACCTTTTTT---T----TTCAAGATGCTGAGAGTTACACTTGGTTACATGAGCTTAATAG--TT
TTATTGCTTATAATCTAAACTTGGAGAGAAGATTGCATAACTGCCTGTACCAAAATCTTTTATTAGTTTGAATGTTTCAA
ATGACTTTTGTTGTGCATTTAGTTGTCTCAATTGAGAATCATTGTATTCCTCAGCAGATTGTCTTTATTTCGAAGAAACG
A
>chr5B_854
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-----------------------------------------------------------------TCGACTGTTGACGCG
TGGGTTATAATAATGACTCGACTCTGTAGGCGGCCGATTCGATCCATGCTTCAGCCGGCCCATGCGTAGTGCTTTTCTTT
TTCTCTTTCCCCCGAACCAAAAATCTGCCGCCGCCGCCCGA---CTTGACAAGCCATGGCCTCCCAACAAGGGCCACCAT
CACCGTCGCCGGCACCAGTGG---------CCACCACCACCGCCATTACTGCTATCGGCGACGACGTCCTCTGTGAGATC
TTCCTCCGCCTCCCATCCCTCCCTAGCCTCGTCCGCGCAGCCCTCGCCTGCCGCGCCTTCCTCCACGCCGTCCGATCGTC
TCCCGCCTTCCGCCGCCGCTTCCGGGCGGTCCACCCGCCCCAAATCCTAGGATTCTTCAACG------C-----------
-AGGCATTCATTACCTTATTCCCCTCGACGGCCGCT---------ACCTAGCCGCGGCCGT---CGACGGCAGCGATTTC
CGCTTCATCCGGCTCCCGAAAGACAGAGACGAG------ACCAGGTGGAAGA---------------------TCCTCAA
TGGCTGCCGCGACA------------CCGCTGCGGCTATGTCTTCCTCTGCAACAAGAACACC------AACCAGATAGC
TGCCTACAACCCCCTCAAGCGGGCGCTGTATATCTTCCCCTACCCTCCCCAAGAGACATGCGA-------CCTCCACTGC
CTTGATTTCCGCATCATCTTCTCCCAAGATGACCAGAGGTCGTTCCGTGTGGTCTGTGT------------------GCA
GCAGAAGCTGGCTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGAGTATCTCTTGGGTGGGC------ACCT
CGAC---GC---CGCAGCCTGGGGACGATGGAGGCGACAATTGGATGCTCTCGTCTTACACAGCTAATACTGTGATGGAT
GAA-TTGATAGATTAGCCTACTGGAAAGACAAAAATACAGGGTATATTGTCGTGCTCAACACTGTGACGCTGCAATTATC
TCGAA---------TGGATTTGCCGCAGCCCTTGAAAGATAAAGACTCCACGCAATTTGAACTTGGCCGGACCAATGATG
GGAAGCTTTGCATGGTTTGCGTAGATGGCTTTGGTGCAGACAAAACAATGATCGCGGTTTGGATTTGGAGAGCCGATGGT
GATGGTG------TTGAAAAGTGGATGCAGCACAAGGTTTTCCCACTGAATACGTTTATTGACCTCACGACGTGCTCAGC
AGAGTACGATGTCATCACGGTGCAGGTTGCGGTGGTAATCGATGGATTTGTGTTCCTGTGTATTGATTTTGGTAGGCTTA
CCAAGTTCTT---CCTGTCTTTCTGCCTGGAAACAGAGAATGTAAACGAATTCTTCAATCATACATTTCACAATGATATC
CATCCCTACATCATGGCGTGGCCTTCTACTTTGCTAAGCAACAAGGTGAGCACTTGCCTT-AAAATACTACTATAAGTAA
ATTAATTCAGACG--GTTTGGTCCCTGTATTGTCTGCTCTTGG----GTTACTTGGGAGCAATGAATTATAGCATAGATC
TGAATATCTGCCATCAGGTTTGTATTTTGCAAGTGTAGTCAGCTGTTTCTTAGTTAATTCTAAGTCTAGTTACACTAACA
CTGATTTGCATATAGCTCATAATACAAGTGTTCAGTTGCAGATTGTATACACGGATTCAGTATTTTAGTCCGATTAAATG
ATATGTGCATTCACAGTATCTTGGGCTAAAGCTTCTCTCCACTAAAATGTTGCGGCAATAATGCTTTGTAATCCTGACCA
CTATGGCACTATGAGGTATCGTTGTAACAAGTGTCTTCTAAACATTGCTAAACGAATCTGTCTTCTAACATTGCTAGACG
AATCTGTCTTGTACAATTTTTGTAGGCTCTGTCTTGTACCATGTGAGTCCATAGCCTTGCACACTTTGCCTACACAAACA
TTTGAATCCTTCCTTTCTGACACTGAAATCATTTTATGTTTCAGGAGAATTCAGTAACCAACATTACTGGAGGCGATGCG
ACAGATGATGGTCCTGTGGGTCAGTGGCGGAGCTTGGTCCAGAAATCTGGGCGGGCCGGCTGTAGGAAATTACTCTAGGG
GTTGTGTTTCATTGGCCGAAAATACGTATATACTGCAGGAACATCGCATGGGCTGGGCGGGCCACGGCCAATTCGGCCTT
GCCGTAGCTCCGCCACTGCTGTGGGTACAGAAGAAACTCTCTCTGTTCTCGGTGGCGGAGAAAGCATCCAAACAATTCGT
GTACGGAGTCCCCTAAAGATCACAGTTTTACTCAAGCATAGAAATTTATTTAACGTATACTGTTCTTGAGGATTAACAGA
TGCAAGAGATCGTATCTTGAGGGTAAGTGCCGAATTTGATGCCTACAGTACAGCATGTCAACAGATTGCAGCATATCCCA
TGCGTATCCATTCTTTTGTTGGAATTGTTAAGTTTGTTCTGCTCTGCTTCGTGCTCACGTCCAAAAACACCTCGCATCAT
ATCAGGTGTGAATTCGAACGTAATAATCTTGGTGGTCATAAATAGTGAAACAATGCTATAGGTTCGTCGTGACATGATTT
ATTACTCTGAGAGTGACCCTTTTTT---TATTTTTCGAGATGCTGAGAGTTACACTTGGTTACATGAGCTTAGTTCTTTT
TTATTGCTTATAATCTAAACTTGGAGAGAAGATTGTATCACTGCCTAGCCAAC-ATGATTGATTAGTTTGAATGTTTCAA
ATGACTTTTGTTGTGCATCTAGTTGTCTCAATTGAGAATCAATGTATTCCTCAGCAGATTATCTTTATTTCCAAGAAACG
A
>chr5B_995
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-------------------------------------------------CAAGCCATGGCCTCCCAACTAGGGCCACCGT
CGCCGTCGCAGGCGCCGGCGAAGTATGATCCAGCGGCCACCACCATCGCTGACATCGGCGACGACCTCCTGCGCGAGATC
TTCCTCCGCCTCCCCTCCCTCCCCAGCCTCGTCCGTGCCGCCCTCGCCTGCCGCACCTTCCTCCGCGCCGTCCGCTCCTC
CCCCGCCTTCCGCCGCCGCTTCCGGGCGCTCCACCCGCCTCAGATCCTTGGATACTTCAGCA------ACCCCTTGCGCA
CCGCCATCCCTGCCTTCGTCCCCTTCCGCAGCCGCTCCGACCCGGACCTCGCCGCCGCCGTGGTCCGCGGCTCCGACTTC
TTGTTCACCCGTCTACCGGAAGACGGCGACGAC------ACTAGGTGGGCGTTCAAGG---------GCG----------
-------------A------------CTGCTCCGGCTACGTCTTCATCCACAACCAGAGCACC------GACCAGATCGC
TGTTTACAACCCCCTCACACAGGCGCTGAATGTCTTCCCCTACCCACCTCAGGAGGCCTGCGA-------TTCCCGCTAT
CTTTATTTTCGCATCATCTTCTCGGAAGACGACCAGATGTCGTTCCGCGTGGTATGTGTTCGTCGCCGCAGGCGGCGGCG
AAGAACCATGGTTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGGGTTTCTCGTGGGTGGAC------ACCT
CAAT---GC---CGCAGGCTGGGGATGATGGAGGTGATAAGTGCATGCTCTCGTCTTACACTGCTA---CGCCGGTGGAT
GAATTTGATAGATTAGTCTACTGGAAACACAAAAATCAAGCATATATAGTCGTCCTCAATGCTGGGACGCTGCAGTTATC
TCGAA---------TGGATTTGCCGCCGCACTTGAAAGATATGGACTCCACAGAATTTGAGCTTGGTCTGACAAAGGATG
GGGAGCTCTGTATGGCTTTCACAGACCAGTTTGGTGCAAACGAAGGGATGCTTGCTGTTTGGTTTTGGAGAGCTGATGGT
GGTGGTG------TTGATAAATGGATGCCGCACAAGATTTTCCCACTGAACAAATTTGTTGATTTCTCTATGCGTTCAGA
AGAGTACTATGATGTCACAGCGCAGGTTATCCGAGTCATAGATGGTTTTGTGTACCTGTCTGTTTATTATCT---GTATA
CAAAGTGCTT---CCTATCCTTTTGCCTGGAAACAGAGAAGGTCAACAAGCTCTTTGAGTATGGACTTGGC------GTC
CATCCCTACATCATGCCGTGGCCTTCTTCTTTGGTATGCAACAAGGTGAGCCTGTGTTTC-AAGACGCCG-----GTAAA
ATTTAT---CCTGATGTTTGGTCCCTGAATCATATGCAATTGATTA----------------------------------
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>chr5B_1000
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------------------------------------------------------CATGGCCTCCCAACTAGGTCCACCAT
CGCCGTCGCTGGAGCCGGCGG---------CTACAACCGCCGACATCACTGCTATCGGCGAAGACCTCCTCCGCGAGGTC
TTCCTCCGCCTCCCCTCCCCCCCGAGCCTCGTCCGCGCCACCCTCGCGTGCCGCACCTTCCTCTGCACCGTCCGATCGTG
CCCCATCTTCCTCCACCGCTTCCTGGCGCTCCACCCGCCCCAAATCCTTGGATTCTTCGAAGGATGGAAA---------A
CAGGCATCCCTTTGTTCATCCCCTTCCGCGACCCCTCCGACCCTGACCTCGCCGCCGCCGT---CTGCGGTGCGGATTTC
CTCCTCACCCGCCTCCTGGAAGACAGCGGCGAC------CCAGGGTGGGACA---------------------TCAAGG-
----------------------ATTGCCGCTGCGGCCACCTCCTCCTCCACAACAGGCGCACT------AAGCAGATCGC
TGCCTACAACCCCCTCACGCAGGCGCTGGATATCTTCCCCCACCCGCCACGAGAGACCTGCGG-------TCCTCGCTAC
CTTCTTTACCGCATCATCTTCCCTAAAGAGGACCAGAGGGCGTTCCATGTGGTTTGTTTCCGTCGCCGCAAGTCGTGCCG
GGGTTCGCGACTTCGGATCTCTGTCTTCTCGTCAGTCAGCAGGGAGTGGCAGTGTTTCTCGTGGGTATGTGTACAAAACT
TGAC---GC---CGCAGCCTCGGAAGGATGGAGGCGACGTA---------TGGTCTTACATTGCTA---CACTGGTGAGT
GGATCTGACCGATTGGCCTATTGGAAAGACAAAGATCAAGCATACATGGTCGTGCTCAACACCCCCACGCCGCATTTATC
TCCAA---------TGGGTTTGCCGCCACCCTCGGAAGATTA---------------TGAGCTTGGTCGGACCAAGGATG
GGAAGCTCTGTTTGGTTTGCATAGATGACGTCTATGCAAACAAAGGAACACTTGCTGTTTGGTTTTGTAGAGTTGATAGT
GATGGTTCG------GACGAATGGATGCCGCACAAGGTTTTCCCACTGAGTGCTTTTATTGATGTCACCATGTGTTCAGA
AGAGTATGATGTTA---TGGTGCAAGTTGTGATGGTCTTGGATGGATTTGTGTTCCTGTCTGTTAGTTATGCGAGGTATA
CCGAGTGCCT---AATATCCTTCTGCCTGGAAACAGAGAATGTAAACAAGCTCTTCACTCATACATTGGACTGCAATATT
CATCCCTACTTCATGGTGTGGCCTCCTTCTTTGGTACGCAACGAGGTGAGCCCTTGCTTC-AAGATGCTG-----GTAAA
ATTTCT--------------------------------------------------------------------------
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>chr5A_1034
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--------------CCAGAGG---------CAACCGCCACCACCATTACTTCTATCGCGGACGACCTCCTCCGGGAGATC
TTCCTCCGCCTCCGTTCCCTCCCGAGCCTCGTCCGCGCCGCCCTCGCCTGCCGCACCTTCCTCGACGCCGTCCGTCTATC
CCCTGCCTTCCGCTGCCGTTTCCGGACGCTCCACCCGCCTCAGCTCCTTGGCTTCTTCAACT------ACCCCTTCCGCA
CAGGCATTCCTACCTTGCTCCCCTTCCGAAGCCGCTCCGACCCTGACGTAGCCGCCGCCGT---CCGCGGCGCCGATTTC
CTCCTCACCCGCCTCCCGGAAGACAGCGGCGAG------CCCAGTTGGGAGA---------------------TGAATTG
-----------------------TTGCCGCGGCGGCTTCGTCGTCCTCCACAACCAGAGCACC------AGCCAGATCGC
CGCCTACAACCCGCTCACGCAGGCGCTGCATATCATCCCCCGCCCGCCCCATGAGACGAGACCTGCCATCTCTCAGCAAT
CTCGATGTCCACTTCATCTCCTCCGAGGAGGACCAGAGGGCGTTCCGTGTTGTCTGCGACCGTCGCCGCAGGCGGCGGCG
GAGGACGCTGGCTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGTGTTTCCCTTGGGTGGAC------ACCT
CGAT---GCGGCGGCAGCATGGGGACGATGGAGGCGACGAGTGCATGCTCACGTGTTACACTGATA---CGCCGCTGAAT
GAACCTGATAGATTGGCCCGCTGGAAACACAAAGATCAGGCATATCTAGTCGTGCTCAACACCGCGACGCTGCAACTATC
CCGGA---------TGGACTTGCCGCCGCCATTGAAGGACATAGATCCTGTACGAACCGAACTTGGTCGGACCAGGGATG
GAAGGCTCTTTCTGCTTTGCATAGATGACTACGATGCATGCAAAGGGATGCTCGCTGTTTGGTTATGGAGAGCCGATGCA
TG---------------CAAATGGACGCCGCACAAGATTTACCCACTCAACAAATTCGTTGATTTCAATCTGTGTTCACA
AGAGCATGATGTCA---TGGCGTCGGTTGTGAGGGTCATGGATGGTTTTGTGTACCTGTCCATTAAGTACGATAGGTATA
CCGGGTGGCT---CCTATCCTTCTGCCTGGAAACAGAGCAGGTAAGCAAGCTTTTTGATCATAGGTTGGACTGCGGTATC
CATCCCTACATCATGGAGTGGCCTCCTTCTTTGATAGGCAACAAGGTGAGC-----------------------------
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>chr5A_1034
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--------------CCAGCGG---------CCACCGCCACCACCATCACTTCCATCACCGACGACCTCCTCCGCGAGATC
CTCGTCCGCCTCCCCTCCCTCCCGAGCCTCGTCCGCGCCGCCCTCGCCTGCCGCACCTTCCTCCGCGCCGTCCGTTTG--
-CCCGCCTTCCGCCGCCGCTTCCGGGCGCTCCACCCGCCACAACTCCTTGGCTACTTCACCG------ACCCCTGCCGCA
CCGCCTTCCCTGCCTTCATCCCCTTCCGAAGCCGCTCCGACCCCGACCTCGCCGCTGCTGT---CCGCGGCTCCGATTTC
TTCTTCACCCGCCTATCGGAGGACGGTGACGAC------AGTAGGTGG---------------------GCGTTCAACG-
----------------------GCTGCTGCTCCGGCTACGTCTTCCTCCACAACGAGAACACC------GACCAGATCGC
TGCTTACAACCCCCTCACGCAGGTGCTGCATATCTTCCCCTACCCGCCTCAGGAGGCCTGCGA-------CCCCTACTAT
CTTGATTTCCGCATCATCTTCTCGGAAGAGGACCGGAGGTTGTTCCGTGTGGTATGTGTTCGTCGCCGGAGGCGGCGGCG
GAGGACGCTGGCCCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGTGTTTCTCGTGGGTGGAC------ACCT
CGAT---GC---CGCAGCCTGGGGATGATAAGTC------------------------CACTGCTA---TGCCGCTGAAT
GAATTTGATAGATTAGTTTACTGGAAACACTTTAGTCAACCATATATAATCGTCCTCGACACTGGGACGCTGCAGTTATC
TCGAA---------TGGATTTGCCGCCACCCTTGCAAGATATGGGCTCCACGGAATTTAAGCTTGGCCAGACCAAGGATG
GGAGGCTATCTTTGGTTTTCATAGATCACCTTCTTGCAAGCAAAGGAATGCTCGCTGTTTGGTTTCGGAGAGCCGATGGT
GACGGCG------TTGAGAAATGGATGCTGCACAAGATTTTCGCACTGAGTGAATTTGTTGATTTCTCTATGTGTTCAGA
AGAGTATCATGATGTCATTGTGCATCCTGCGGAGGTCATAGGTGATTTTCTGTACCTGTATCTTTGTTATGATGGGTATA
CCAAGTGCTGCTGCCTATCCTTGTGCCTGGAAACAGACAAGGTTAACAAGTTCTTTGATCATAG------------TGTC
CATCCCTACATCATGGCGTGGCCACCTTCTTTGGTATGCAACAAGGTGAGCCCATGCTTCCAAGACACTA-----GCAAA
ATTTCTCCCCCTGGCGTTTGGTCCATGCATCATATGCATTTAA----GTTA-----------------------------
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>chr5D_1034
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--------------CCAGCGG---------CAACCGCCACCACCATTACTTCTATCGCCGACGACCTCCTCCGGGAGATC
TTCCTCCGCCTCCTCTCCCTCCCGAGCCTCGTCCGCGCCGCCCTCGCATGCCGTGCCTTCCTCCGCGCCGTCCGTTCGTC
CCCCGCCTTCCGCTGCCGCTTCCGGGCGCTCCATCCGCCCCAGCTCCTAGGCTTCTTCAGCG------CCCCCTACCGCA
CCGCCATCCCTGCCTTCATCCCCTTCCGAAGCCGCTCCGACCCCGACCTCACCGCCGCCGT---CCGCGGCTCCGATTTC
CTCCTCGCCCGGCTCCCGGAAGACAGCGGTGAC------CCCGGGTGG---------------------G----------
-------------A------------CCGCCGCGGCTACGTCGTCCTCCACAACCAGAGAACC------AGCCAGATCGC
CGCCTACAACCCCCTCACGCGGGCGCTGCACATCATCCCCCGCCCACCCCATGAGACCTGCCA-------TCTCAGCAAT
CTCGATGTCCACTTCATCTTCTCCGAGGAGGACCAGAGGGCGTTCCGTGTGGTCTGCGACCGTCGCCGCAGGCGGCGGCG
GCGGAAGCTGGCTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGTGTTTCCCGTGGGTGGAC------ACCT
CGAC---GC---CGCAGCCTGGGGACGATGGAGGCGACGAGTGCATGCTCACGTTTTGCACTGATA---CGCCGCTGAAT
GAACCTGATAGATTGGCCCACGATAAACACAAAGATCAATCATATCTAGTCGTGCTCAACACTGCGACGCTGCAACTATC
CCGGA---------TGAATTTGCCGCCGCCCCTGAAAGATATAGATCCTCTACAAATCAAACTTGGTCGGACCAAGGATG
GGAAGCTCTTTTTGGTTTGC---GACGACAGCGATGCAAGCAAAGGGATACTTGCTGTTTGGTTATGGAGAGCCGATGGT
GATGGTGATGGGGTTGAGAAATGGATACCGCACAAGATTTATCCACTCAATAAATTTGTTGATTTCACTCTGTGTTCAGA
AGAGTGTGATGTCA---TGGCGCGTGTTGTGGCGGTCATAGATGGTGTTGCATACTTGTGTATTGAGTATGACAGGGATA
CAGGGTGTCT---CCTATCCTTGTGCCTGGAAACAGAGAAGGTAAACAAGCTTTTTGATCATAGAGTTGACTGTGCTGTC
CATCCCTACATCATGGAGTGGCCTCCTTCTTTGGTAGGCAACAAGGTGAGC-----------------------------
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>chr5D_1034
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--------------CCAGCGG---------CGACCGCCACCACCTTCACTGCCATCACCGACGACCTCCTCCGCGAGATC
TTCGTCCGCCTCCCCTCCCTACCGAGCCTCATCCGCGCCGCCCTCGCCTGCCACACCTTCCTCCGCGCC-----------
-------TTCCGCCGCCGCTTCCGGGAGCTCCACCTGCCACAGCTCCTTGGGTACTTCACCG------ACCCCTGCCGCA
CTGCCATCCCTGCCTTCACCCCCTTCCGAAGCCGCTCCGACCCCGACCTGGCCGCGGTCGT---CCGCGGCTCCGATTTC
TTCTTCACCCGCTTACCGGAGGTCGGCGAC---------------TGG---------------------GCGTTCAACA-
----------------------GCTGCTGCTCCGGCCACGTCTTCCTCCACAACGAGAACACC------GACCAGATCGC
TGTCTACAACCCCCTCACACAGGCGCTGAATGTCTTCCCCTACCCGCCTCAGGAGGCATGCGA-------TTCCCGCTAT
CTTGATTTTCGCATCATCTTCTCGGAAGACGACCAGATGTCGTTCCGCGTGGTATGTGTTCGTCGCCGCAGGCGGCGGCG
AAGAACCATGGTTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGGGTTTCTCGTGGGTGGAC------ACCT
CAAT---GC---CGCAGGCTGGGGATGATGGAGGTGATAAGTGCATGCTCTCGTCTTACACTGCTA---CGCCGGTGGAT
GAATGTGATAGATTAGTCTACTGGAAACACAAAAATCAAGCATATATAGTCGTCCTCAATGCTGGGACACTGCAGTTATC
TCGAA---------TGGAT-------------------------------------------------------------
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>chr5D_1054
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-------------------------------------------CATCACTGCCATCGGCGACGACCTCCTGCGCGAGATC
TTCCTCCGCCTCCCCTCCCTCCCCAGCCTCGTCCGCGCCGCCCTCGCCTGCCGCACCTTCCTCCGCGCCGTCCGTTCCTC
CCCCGCCTTCCGCCGCCGCTTCCGGGCGCTCCACCCGCCCCAGATCCTTGGATACTTCACCG------TCCACTACCGCA
CTGCCATCCCTGCCTTCGTCCCCTTGCGCAGCCGCTCCGACCGGGACCTCGCCGCCGTGGT---CCGCGGCTCCGATTTC
TTCTTCACCCGTCTACCGGAAGACGGCGACGAC------ACTAGGTGG---------------------GCGTCCAATGG
CAAG-----------------------TGCTCCGGCTACGTCTTCATCCACAACCAGAGAACCGACCAGAGACAGATCTC
TGCCTACAACCCCCTCACACAGGCGCTGAATGTCTTCCCCTACCCGCCTCAGGAGGCCTGCGA-------TCCCAGCTAT
CTTGATTTTCGCATCATCTTCTCGGAAGACGACCGGAGGTCGTTCCGTGTGGTATGTGTCCGTCACCGCAGGCGGCGACT
GAGGACGCTGGCTCGTTTATCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGGGTTTCCCGTGGGTGGAC------ACCT
CAGT---GC---CGCAGCCTAGGGACGATGGAGGTGATAAGTGCTTGCTCTCGTCTTACACTGCTA---CCCCGGTGGAT
GAATTTGATAGATTAGTCTACTGGAAACACAAAAATCAAGCATATATAGTCGTCCTCAACGCTGCGACGTTGCAGTTATC
TCGAA---------TCGATTTGCCGCCGCACTTGAAAGATATGGACTCCATAGAATTTAAGCTTGGTCCGACCAAGGATG
GGAAGCTCTGTATGTCTTTCACAGATCACTTTGCTGCAAACGAGGGAATGCTCAATGTTTGGTTTTGGAGAGCTGATGGT
GATGGTG------TTGATAAATGGATGTCGCACAAGATTTTCCCACTGAGCAAATTTGTTGATTTCTCTATGTGTTCAGA
AGAGTATGCTGTCA---CAGCGCAGGTTAAGGGAGTCATAGATGATTTTGTGCACCTGTCTGTTTATTATCTCA---ATA
CCAAGTTCTT---CCTATCCTTTTGCCTGGAAACAGAGAAGGTCAACAAGCTCTTCGAATATGGACTTTGC------GTT
GATCCCTACATCATGCCGTGGCCTTCTTCTTTGGTATGCAACAAGGTGAGCCTGTGCTTC-AAGACGCTA-----GTAAA
ATTTAT---CCTGACGTTTGATCCCTGAATCATATGCATTTAA----GTTACTTGAGACCAATTGATTCTTACATAGTTG
TGAAAATCTGCCATCAGTTTGATATTTTGC--------------------------------------------------
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>chr5B_1163
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------------------------------------------------------------------------CGTTCGTC
CCCCGCCTTCCGCAGCCGCTTCCGGGCGCTCCATCCGCCCCTGCTCCTAGGCTTCTACAGCG------CCCCCTGCGGCA
CCGCCATCCCTGCCTTCATCCCCTTCCGAAGCCGCTCCGACCCGGACCTCGCCGCCGCCCT---CCGCAGCTCCGATTTC
CTCCTCACCCGCCTCCCGGAAGAAAGCGGTGAG------CCCGGGTGG---------------------G----------
-------------AGATGAATTGCTGCCGCGGCGGCTACGTCGTCCTCCACAACCAGAGGACC------AGCCAGATCGC
CGCCTACAATCCCCTCACGCAGGCGCTGCACATCATCCCCCGCCCGCCCCATGAGACCTGCCA-------CCTCATCAAT
CTCGATGTCCACTTCATCTTCTCGGAAGAGGATCAGAGGGCGTTCCGTGTGGTCTGTGACCGTCGCCGCCGGCGGGGGCG
GAGGAAGCTGGCTCGCTTCTCTGTCTTCTCATCGGACAGCAGGGAGTGGCAGTGTTTCCCGTGGGTGGAC------ACCT
CGACACGGC---GGCAGCCTGGGGATGATGGAGGCGACGAGTGCATGCTCACATTTTACACTGATA---CGCCGCTGAAT
GAACCTGATAGATTGGCCCACGATAAACACAAAGATCAGGCATATCTAGTCGTCCTCAACACTGCGACGTTGCAACTATA
CTTAGTCGTCCTGGTGGATTTGCCGCCGCCATTGAAAGACATAGACCCTGTAGGAATCATACTTGGTCGGACCAGGGATG
GAAGGCTCTTTTTGGTTTGCATAGATGACTACGATGCAAGCAAAGGAAGGCTTAATGTTTGGTTATGGAGAGCCGATGGT
GATGGTGATGGCGTTGAGAAATGGATGCCGCACAAGATTTACCCACTCAATAAATTTGTTGATTTCACTCTGTGTTCACA
AGAGTGTCATGTAA---TGGCGTCGGTTGTGAGGGTCGTAGATGGTTTTGTGTTCTTGTGTATTGAGTATGAGAGGGATA
CAGGGTGTCT---CCTATCCTTCTGCCTGGAAACAGAGAAGGTAAACAAGCTTTTTGATCATAGAGTTGACTGTGCTGTC
CATCCCTACATCATGGAGTGGCCTCCTTCTTTGGTAGGCAACAAGGTGAGC-----------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-----------------S------S-S------S----------------------------------------------
-------------------------------------------S--S--------S----------------S-------
-----------S---------------S-S--S--SSSSS----------------------------------------
---------------------------------------------------------------S----------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------------S------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------S----S----------------------------------------
-S------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
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----------------------------------------------------S----------------S----------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
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--S---------S----------------------------------------------------------------S--
------S-------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------------S------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------S----------------------------------
-S--------S------------------------------------S-------------------S----------S-
--S--------------------------------------S--------------SS--S------------S------
------S----------------------------------------------------------S---S----------
-------------------------SSS--------------------------------S--------------S----
---------S----S-S-----S---------------------S-----------------------------------
------------S---------------------------------------------------------S---------
-
>forward_524
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------------------------AGCAGCCATGTTACCAGCAT------------------------------------
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>reverse_2887
--------------------------------------------------------------------------------
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------TGTGTCGGTGTAGCAAGTGT------------------------------------------------------
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-
