>input_sequence_53721
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---------------------------------------------------------AGCTATCACTCACTCCAGCGCTA
-GCTCCGATGATGGCCGCCTCCTCCTTCCTCCCGCTCCACCTCCCGGCCTCCCCCAGGCCGGCCACCGTGGCCGCGAGGG
CAGCCTCGGGCGTCGCGTCGACGGTGCCCGCCGCT---ACGCAGACGTCGCAGCTGGAGGAGACCTTCGGCCGGAAGGGC
CTCCGGTTCGGGACGGACGCCACGGGCGCGCCCACGGCGGAGCTGAGCGTGCGCAACGGCAGCTCGCTGCAGCTGCGGCT
CAACGACGGGCTGGTCACGTCGTACCGGCCCAAGGTGTCCTGGGAGGGCGGGGACGGCTGCCGGGAGCTGCTGCACACCG
TGGCCGGCGCCGGCGCGGTCAAGGGCGGCGTCGGGCTCGTGCTCAACGAGGCCTCCTCCTCGTCGTCCGGCGGCGCGTCA
CTCCTCGGCGCGTCCGAGTGGTCCGTGGCGGACGTGGACTCGGACTCATACGACGCCGTGCAGGTGGAGCTCGGGTGCAG
CG---------CCAAGGGGGCCAAGCTGGAGGTGTCGTACGTGGTGACGCTGTACCCGCTGAGCATGGCGACGGCGGTGA
TCGTCAAGAACAACGGGGCCAAGCCGGTGGAGCTGACGGGCGCCGTGCTGAGCCACATCAAGTTCGACAAGCGGCGGGGC
ACGGCCGTGGAGGGGCTCCGCGGCTGCCCCTACTGCTCCCACCCGCCGCCGGCGTCCGGGTTCGCGCTGCTCACCCCCGC
CGAGGCCATGAAGCGGGAGGAGTCCGGGTGGTTCGGCGGCGGCGG---GGAGGAGCCCCGGCAGGGCGCCTGGACCGTGG
AGGAGAACCTCTACACCATCCTCAAGAAGAAGGTGAGCAGGGTGTACGCGGCGCCGCCCGAGGAGAGGAAGAAGCGCATC
TACAGCACCGCGCCGTCCAAGTTCACCACCATCGACCAGGTTCGTTCGTCTCTTGGCTTGGGATGCATCATCCAT-----
-------------------TCGCATTGCTCACTGATGATATATGGCTTGTGATTTGCTTGGACAGTCTAGCGGGCTGGGG
TTCAGGCTGGTGAGGATGGGGTTCGAGGACATGTACCTGAGCAGCCCGGGAGGATTGTACGAGAAGTTCGGCAACGACTA
CTTCCTCTGCACCGGGCCGGCGTCCATCCTCGTGCCCGTCGTCGTCGGCCCCGGCAAGGAGTGGAGGGGCGCTCAGGTCA
TCGAGCACGACAACTTGTAACACTTCCTTTTTCTTGCGTGCCAACAGAGTTAGAGAGGAAATCAATCATGTACATTCTTA
CACATGGGGATGAATCTTGTAACTGCCCACTGCGATCAATCTGTACACATGCGTAGTAGTACAAGTA-----------TA
ACATACAAATGAATTCTCAAACG---------------------------------------------------------
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----------------------------------------------------------------------
>chr4D_1_TraesCS4D01G273000
TACGTCCAACATGTACAATCTCAGTCTGAATGAACTTGGTACTGGATTTAAACTTGATGCCACGGAAGAGATCACCCGCA
AAAAGGAAAAGCGCCCGGCCAACTCCAAGCTGATCAGCCACGGGAGAGGGCCAAGGCCTACGCATGGAGGGCGTCAGTCA
GACCATTCGCTGAACATGGCTCCGGACAGTATTGGAATGCGTCAGTTTCCAGCCGTTTCTCACCGTGGTTGCCCCGATTA
CGTTCAGTCCACCATTGCCAAAGTAGGTATTGTCTGTCAGCAGTTTCTTCTCTTCTGCCAGCCGTAGGATAGCCTGAAGA
ATCTCGCAAAAGATAAATTATTGTCAGGAAA-------------------------------------------------
----------------------------------------TTAAGCAAGGAAAAAAGCAAAAATT---------------
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----------ATTGTCAGAAGTGGGGTTTGAACCCACGCCCTCGTTAGAGGACCAGAACTTGAGTCTGGCGCCTTAGACC
ACTCGGCCATCCTGACTTGTACGTACGGTTCGGTTTTAATGCCTTAATGTAGTCATAGCTACAACATC------------
--------------------------------ATGATATTGTATACAGTCCATCACTTTACATATACTTGTC-TTTTGTC
GTTGTTGTTGCGAAAGTGTACATATACTTGTAGAACTCCCATTTGAGATCCGTTCCTACAAGTAAATTCCTATCAACGCG
AACATTCATGAATTTAGCATCGGCCTCAGAGTTCCTCTGAATAAAAATTGAAACATACTACTCTCTCGGTTCCAAAA---
------TAGATGACCCAATTTTATATTAAAGTTAGTACAAAGTTGGGTCATCTATTTTGGAA------------------
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-----------------------------------------------------GTTTCTGAATTGCGAAAACAAAGATCA
T----TTTCTTTTCTGCATGCTCAT---TCCGGTATCAAGCTGTTGCTA-------------GGCAGGCTCGCAGTCGCA
GCAG----------------------------------------------------------------------------
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--------------------------------------------------------------------------AGCAAG
GAGAGGACACGGACAAGGAGCGAGCGCGAAACCACCTATCCTCAAGCCGGTGGATATGAGGCTGCAGTCAGTGACACCCA
ATCGGCCTCGACTCTCAAGGGGAAGGCC--------AGCACCTTCCCCTTCTCCGCTAGCTATCACTCACTCCAGCGCTA
-GCTCCGATGATGGCCGCCTCCTCCTTCCTCCCGCTCCACCTCCCGGCCTCCCCCAGGCCGGCCACCGTGGCCGCGAGGG
CAGCCTCGGGCGTCGCGTCGACGGTGCCCGCCGCT---ACGCAGACGTCGCAGCTGGAGGAGACCTTCGGCCGGAAGGGC
CTCCGGTTCGGGACGGACGCCACGGGCGCGCCCACGGCGGAGCTGAGCGTGCGCAACGGCAGCTCGCTGCAGCTGCGGCT
CAACGACGGGCTGGTCACGTCGTACCGGCCCAAGGTGTCCTGGGAGGGCGGGGACGGCTGCCGGGAGCTGCTGCACACCG
TGGCCGGCGCCGGCGCGGTCAAGGGCGGCGTCGGGCTCGTGCTCAACGAGGCCTCCTCCTCGTCGTCCGGCGGCGCGTCA
CTCCTCGGCGCGTCCGAGTGGTCCGTGGCGGACGTGGACTCGGACTCATACGACGCCGTGCAGGTGGAGCTCGGGTGCAG
CG---------CCAAGGGGGCCAAGCTGGAGGTGTCGTACGTGGTGACGCTGTACCCGCTGAGCATGGCGACGGCGGTGA
TCGTCAAGAACAACGGGGCCAAGCCGGTGGAGCTGACGGGCGCCGTGCTGAGCCACATCAAGTTCGACAAGCGGCGGGGC
ACGGCCGTGGAGGGGCTCCGCGGCTGCCCCTACTGCTCCCACCCGCCGCCGGCGTCCGGGTTCGCGCTGCTCACCCCCGC
CGAGGCCATGAAGCGGGAGGAGTCCGGGTGGTTCGGCGGCGGCGG---GGAGGAGCCCCGGCAGGGCGCCTGGACCGTGG
AGGAGAACCTCTACACCATCCTCAAGAAGAAGGTGAGCAGGGTGTACGCGGCGCCGCCCGAGGAGAGGAAGAAGCGCATC
TACAGCACCGCGCCGTCCAAGTTCACCACCATCGACCAGGTTCGTTCGTCTCTTGGCTTGGGATGCATCATCCAT-----
-------------------TCGCATTGCTCACTGATGATATATGGCTTGTGATTTGCTTGGACAGTCTAGCGGGCTGGGG
TTCAGGCTGGTGAGGATGGGGTTCGAGGACATGTACCTGAGCAGCCCGGGAGGATTGTACGAGAAGTTCGGCAACGACTA
CTTCCTCTGCACCGGGCCGGCGTCCATCCTCGTGCCCGTCGTCGTCGGCCCCGGCAAGGAGTGGAGGGGCGCTCAGGTCA
TCGAGCACGACAACTTGTAACACTTCCTTTTTCTTGCGTGCCAACAGAGTTAGAGAGGAAATCAATCATGTACATTCTTA
CACATGGGGATGAATCTTGTAACTGCCCACTGCGATCAATCTGTACACATGCGTAGTAGTACAAGTA-----------TA
ACATACAAATGAATTCTCAAACGAAATTACATGGGCGTGTGTGAAGAGGACTTGAAAACCTCAAACG-------------
------AACGAGCAATAAAAATGGAC--TCTCCCTCATAGAATTCATCGCATCAGCTCAACATAATCCACACAACTCCAG
ACACAAGCATCTGGTACAAAAGAAAGAACCCAAGTGCTGGTGACAACATAATCAAATAAGCGCGCAATTTGCCGCCACCT
ATTTCTGCCAGTAAACAGTTTACTCAAGTAAACCCGCATCCTTAAGAGCAGTCTCAAAATTGTCCTCGCTTTTCCAGTTG
GGGACCTCAGGCACTTTGTGCTGGAAGTAGTCCTCGATCTTTGTCATCACAACTTCATCAGTTTGACCACATAGCAGGTT
GAACACAGCTCCTGTCACCACCAAAATTTCAGT--------TAGGCCACAAGATAAGCAACTCTACTCAAC--AGCGATT
AACTCATAAACTGGTATATAACACAACTTATTATGTGTCCAACTGA----------------------------------
TAAATCATGAAAACTATCCAAGAAAATCAATTGAAAATCTCCAGAAATAGGAAATCACAACCTCTGAAGAAAAAAAATGA
AAATGAGCA-AACAAACGTGACATCTATAATCAACAAACAATGGTCACATCAGTTCTATCATAT--------AGGAAGCT
AAAAATCCTATTGCCAAATCCTACTCGCAGAAG------ACTGGTTCTGCTGACAAGTTCATCCTTAGGCTAGAACAAAC
AGGCATTACGATTGACTAAATGTAGCGTGTTTGCTTATCGATGGTTAACAGGTTCAATCTGTCATTAT-CCCAAGCCATT
TAATTCCTATTAACACCGCGACTGTCTGGCACGGTGTT-------GACCAATATGC-----TACAGTGGTGTATGTACAT
AATAGACTGATAAGAC----------------------------------------------------------------
----------ATAAATTTACCTTTTCGGCCAAAGCGCCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGTT
CATCTCTCGTATTATACTTGATTGGCATGTCGTAGTTGATGACCAGGTTAACCTTTCAAAGGAAGAATGT
>chr4B_119
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--------------------------------------CACGGGAGAGGGCCAAGGCCTCCGCATGTAGGGCGTCAGTCA
GATCATTCACTGAACATGGCTCCGGACAGTATTGGAATGCGTCAGTCTCCAGCCGTTTCTCACCGTGGTTGCCCCGATTA
CGTTCAGTCCACCGTTGCCAAAGTAGCTAT----TGTCAGCGGTTTCTTCTCCTCTGCCAGCCTTAGGATAGCCTGAAGA
ATCTCGCGAAAGAGAAAATTTTGTCAGAAAAAGTGATGTAATTGTTGAAGTAAATTTAAGCAAGGAAAAAAGCAAAAATA
ATTGTCGGAAGTGGGGTTTGATGTAATTGTTGAAGTAAATTTAAGCAAGGAAAAAAGCAAAAATTTAAGCAAGGAAAAAA
GCAAAAACAATTGTCGGAAGTGGGGTTTGATGTAATTGTTGAAGTAAATTTAAGCAAGGAAAAAAGTAAGCAAGGAAAAA
AGCAAAAACAATTGTCAGAAGTGGGGTTTGAACCCACGCCCTCGTTAGAGGACCAGAACTTGAGTCTGGCGCCTTAGACC
ACTCGGCCATCCTGACTTGTACGTACAGTTCGGTTGTAATATCTTAATGTAG-CATAACTACAACATC------------
--------------------------------ATAATATTGTATACAGTGCATCACTGTACATATACTTGTCT-------
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>chr4A_346
AGTAA---------------------------------------------------------------------------
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--------------------------------------ATGTAAGCAAGGAAAAAAAATAA-------------------
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---AAAAGAAATTGTCAGAAGTGGGGTTTGAACCCACGCCCTCGTTAGAGGACCAGAACTTGAGTCTGGCGCCTTAGACC
ACTCGGCCATCCTGACTTGTACGACAACTACAGTTTTAGAACATATCTATAGATTATTACTACTCCGCACCTGCATCTGT
ATAACAGTGTGTATTTTTTTTGCCTTCTCCGTATAACATTGTGTAAATTGAAGTACTAGTGCATGACAACTTATTCAGCA
GACACTCCATCTGAGAACCGTTCC----------------------------TTCCTACAAGTAAATTCCTATCCATGCC
AACATTTATCAGTTCAGCATCGGCTTCAGGGTTC--CTGAATAAAAACTGAAACACACTACA------------------
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------------------------------------------------TACATGTTTTTGAATTGCAAAAAACGAAGATC
ATGTAGTTCTTTTCTG-ATGCTCAT---TCCGGTATCGAGCTGTTCCTATCTACTCCCTTCATTTAGAATTACTTGTCGC
AGAAATGGATGTATCTAGACGTATTTTAGTTCTACAACAACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTA
GGCTAGAGGTGAAATCCATAAGATCTCACAACCAACTCATGGCTCTAGCACATGGATAGCAAGCTTCCACGCACCCCTGT
CCATAGCCAGCTCTTTGTCGATACTCCAATCCTTCAGGTCTCTCTTAACGGACTCCTCCCATGTCAAAATCGATCGACCC
CGCCCTCTCTTGACATTCTCCGCACGCGTTAGCCGTCCGCTATGCACTGGAGCTTCTGGAGGCCTGCGCTGAATATGCCC
AAACCATCTCAAACGATGTTGGACAAGCTTCTCCTCAATTGGTGCTACCCCAACTCTATCTCGTATATCATCATTCCGGA
CTCGATCCTTCCTCGTGTGGCCACACATCCATCTCAACATACGCATCTCCGCCACACCTAACTGTTGAACATGTCGCCTT
TTAGTCGGCCAACACTCCGCGCCATACAACATTGCGGGTCGAACCGCCGTCCTGTAGAACTTGCCTTTTAGCTTTTGTGG
CACTCTCTTGTCACAGAGAATGCCAGAAGCTTGACGCCACTTCATCCATCCGGCTTTGATTCGATGGTTCACATCTTCAT
CAATACCCCCATCCTCCTGCAACATTGACCCCAAATACCGAAAGGTGTCCTTCCGAGGTACCACCTGGCCATCAAGGCTA
ACCTCCTCCTCCTCACAGCTAGTAGTACTGAAACCGCACATCATGTACTCGGTTTTAGTTCTACTAAGCCTAAACCCTTT
CGATTCCAAGGTTTGTCTCCATAACTCTAACTTCCTATTTACCCCCGTCCGACTATCATCAACTAGCACCACATCATCCG
CAAAGAGCATACACCATGGGATATCTTCTTGTATACCCCTTGTGACCTCATCCATCACCAATGCAAAAAGATAAGGGCTC
AAAGCTGACCCCTGATGCAGTCCTATCTTAATCGGGAAGTCATCGGTGTCGACATCACTTGTTCGAACACTTGTCACAAC
ATTATTGTACATGTCCTTGATGAGGGTAATGTACTTTGCTGGGACTTTGTGTTTCTCCAAGGCCCACCACATGACATTCC
GCGGTATCTTATCATAGGCCTTCTCCAAGTCAATGAACACCATATGCAAGTCCTTCTTATGCTCCCTATATCTCTCCATA
AGTTGTCGTACCAAGAAAATGGCTTCCATGGTCGACCTCCCAGGCATGAAACCAAACTGATTTTTGGTCACGCTTGTCAT
TCTTCTTAAGCGGTGCTCAATGACTCTCTCCCATAGCTTCATTGTATGGCTCATCAGCTTAATTCCACGGTAATTAGTAC
AACTCTGAACATCCCCCTTGTTCTTGAAGATTGGTACTAATATACTCCGTTTCCATTCTTCTGGCATCTTGTTTGCCCGA
AAAATGAGGTTGAAAAGCTTGGTTAGCCATACTATCGCTATGTCCCCGAGACCTTTCCACACCTCAATGGGGATACAATC
AGGGCCCATCGCCTTGCCCCCTTTCATCCTTTTTAAAGCCTCCTTCACCTCAGACTCCTGGATGCGCCGCACAAAACGCA
TGCTGGTCTCATCAAAGGAGTCATTCAGTTCAATGGTAGAACTCTCATTCTCCCCATTGAACAGCTTGTCGAAGTACTCC
CGCCATCTATGCTTAATCTCTTCGTCCTTCACCAAGAGTTGGCCTGCTCCGTCCTTGATGCATTTGACTTGGCCAATATC
CCTCGTCTTCCTCTCCCGGATCTTAGCCATCTTATAGATGTCCCTTTCACCTTCCTTCGTGCCTAACCGTTGGTAGAGGT
CCTCATATGCCCGACCCCTTGCTTCACCAATAGCTCGCTTTGCGGCCTTCTTCGCCATCTTGTACTTCTCTATGTTGTCT
GCACTCCTATCCAGGTATAGGCGTCTGAAGCAATCTTTCTTCTTTTTAAGCGCCTTCTGGACATCATCATTCCACCACCA
GGTATCCTTATCTTCGCTTCTCCTTCCCCTGGACACTCCAAACTCCTCTGAGGCCACCTTACGAATGCAAGTCGCCATCT
TCATCCATACATTGTCCGCATCCCCTCCTTCCTCCCAAGGGCCCTCCTTAAATACCCACTCCTTGAACACCTGAGCTACC
TCCCCCTTGAGCTTCCACCACTTCGTTCTAGCGATCTTGGCACGCTTATCCCGCTGGACACGAATCCGAAAGCGGAAGTC
AGCAACCACCAGCTTATGCTGGGGTACAACACTCTCCCCAGGTATCACCTTACAGTCTAGGCACGCACGCCTATCTTCTC
TTCTCGAGAGGATGTATTTTAGTTCTAAATACATCTATTTCCAAGACAAATAATTTGGAACGGAGGGAATACCTAGCAAA
GAGAGCACAAGGACGAGGA--------GAAACCACCTATCCTCAAGCCGCTGGATATGAGGCTGCG----GTGACACCCA
ATCGGCCTCGAGTCTCAAGGGGAAGGAAGCTAGGCTAGCACCTTCCCCTTCTCCGCTAGCTATCACTCACTCCAGCGCTC
CGCTCC---GATGGCCGCCGCCTCCTTCCTCCCCCTCCACCTCCCGGCCTCCCCGAGGCCGGCCACCGTGGCCGCGAGGG
CAGCCTCGGGCGTGGCGTCGACGGTGCCCGCCGCC---ACGCAGACGTCGCAGCTGGAGGAGACGTTCGGCCGGAAGGGC
CTCCGGTTCGGGACGGACGCCACGGGCGCGCCCACGGCGGAGCTGAGCGTGCGCAACGGCAGCTCGCTGCAGCTGCGGCT
CAACGACGGGCTGGTCACGTCGTACCGGCCCAAGGTGTCCTGGGAGGGCGGGGACGGCTGCCGGGAGCTGCTCCACACCG
TGGCCGCCGCCGGCGCGGTCAAGGGCGGCGTCGGGCTGGTGCTCAACGAGGCCTCCTCGTCGTCATCG------------
CTGCTCGGCGCGTCGGAGTGGTCGGTGGCGGACGTGGACTCGGACTCGTACGACGCGGTGCAGGTGGAGCTCGGGTGCGG
CGTCGGC---------GGGGCCAAGCTGGAGGTGTCGTACGTGGTGACGCTGTACCCGCTGAGCATGGCGACGGCGGTGA
TCGTCAAGAACAACGGGGCCAAGCCGGTGGAGCTGACGGGCGCCGTGCTGAGCCACATCAAGTTCGACAAGCGGCGGGGC
ACGGCCGTGGAGGGCCTCCGGGGGTGCCCCTACTGCTCCCACCCGCCGCCGGCGGCCGGGTTCGCGCTGCTCACCCCCGC
CGAGGCCATGAAGCGGGAGGAGTCCGGGTGGTTCGGCGGCGGCGGCGGGGAGGAGCCCCGGCAGGGCGCCTGGACCGTGG
AGGAGAACCTCTACACCATCCTCAAGAAGAAGGCGAGCAGGGTGTACGCGGCGCCGCCGGAGGAGAGGAAGAAGCGCATC
TACAGCACCGCGCCCTCCAAGTTCACCACCATCGACCAGGTTCGTTCGTTT-----CTTGGGATGCATGCAATGTACTGT
-ATGATAATCATTCATCGATCGCTTTGCTCACTGATAATATTTGGACTGTGGTG--------CAGTCTAGCGGGCTGGGG
TTCAGGCTGGTGAGGATGGGGTTCGAGGACCTGTACCTGAGCAGCCCGGGAGGACTGTACGAGAAGTTCGGCAACGACTA
CTTCCTCTGCACCGGGCCGGCGTCCATCCTCGTGCCCGTCGTCGTCGGCCCCGGCGAGGAGTGGAGGGGGGCACAGGTCA
TCGAGCACGACAACTTGTAACTGCT--TTTTTCTTGCGTGCCAACAGAGTTACACAAGAAATCA----TGTACATTCT--
CACATGGGGATGAATCTTGTAACTACCCATTGCGATCAATATGTACACATGCAGTAGATTACTTGCCCATCTCGTAACTA
ACATACAAATGAATTTTCAAAA-AAATTACATGGTCACGTGTGAAGAAGACTTGAAAACCTCAAAGGAAGTTATGCTTTG
GAAAATAACAAGCA-TAAAGTTGGAC--ACTCCCTCATAGAATTCACTGTATCAGCTCAACATAATCCACATAACTCCAG
ACACAATCATCTGGTACAAAAGAA-----CCAAGCGCTGGTGGCAACATAATCGCGGTAAGCA-----------CCACCT
ATTTCTGAGAAT-----GTTTACTCAAGTAAACCCGCATCCTTGAGAGCAGTCTCAAAATTGTCCTCGCTTTTCCAGTTG
GGGACCTCAGGCACTTTGTGCTGGAAGTAGTCCTCGATCTTTGTCATCACAACTTCATCAGTTTGACCACATAGCAGGTT
GAACACAGCTCCTGTCACCACCAAAAATTCAGT--------TAGGCCACAAGATAAGCA-CTCTACTCAAC--ACAGATT
AGCTGATAAACTGGCATAACAAAATGTATGTTTCA-----AAATGA----------------------------------
TAAATCATGAACACAATCAAAGGAAATCAATTGACTGTCTCAAGAAATAGGAGATCACAACTTCTTAAGAAAAAATTAAA
TGGAACAAACAACATGAGGCCG----ATAATCAACAAACAATGGTCACATCAGTTCTATCTTATCCTAATAAAGGATGCT
AAAAATCCTATTGCAAAATCCTACTCACAGAAG------ACTGGTTCTGCCGACAAATTCAATCTTAGGCTAGGACAAAC
AGGCATTAGGATTGACTAAATGTAGCGTGTTTGCTTATCACTGA-TAACAGGTTCAATCTGCCATTAACCCCAAGCCATT
TAATTCCTATCAACACCATTAATGTCTGTCACAGCGTT-------GACAAAA--TATGC-TTACAATGGTGTATGTACAT
A---GACTGCTAG-------------------------------------------------------------------
----------ACAAATTTACCTTTTCGGCCAAAGCGTCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGTT
CATCTCTCGTATTATACTTGATTGGCATATCGTAGTTGATGACCAGGTTAACCTTTCAAAGTTAGAATGT
>chr4B_430
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---------------------------------------------------------------GTCTGGCGCCTTAGACC
ACTCGGCCATCCTGACTTGTACGTACAGTTCTGTTTTAACGCCTTAATGTAGTAGTATCTACAACATC------------
--------------------------------ATGATATTGTATACAGTCTATCACTGTACATATACTTGTCTTTTTGTT
GTTGTTGTTGCGAACGTGTACATATACTTGTCGAACTCTCACTTGAGATCCGTTCCTATAGGTAAACTCCTATCAACGCG
AACATTCATGAATT-AGCATCGGCCTCAGAGTCCCTCTGAATAAAAGCTGAAACATACTCCCTCTGTTTCTAAATATAAT
TTTTTCTAGAGATTCCAATAAAAAACAACATACAGAGCAAAGTGGGTGAATCAGCACTCTGAACTACTCCCTCTGTAAAC
TAATATAAGAGTGTTTAGATCACTAAAGTAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTATATCCTATGTA
GTCCATAGTAAAATCCCTAAAAAGACTTATATTTAGGAAGAGAGGGAGTACATGTTTCTGAATTGCGAAAACAAAGATCA
T----GTTCTTTTCTGCATGCTCATTCCTCCGGTACCAAGCTGTTGCTACCGTAGACAGGCAGGCAGGCTCCCGGTCGCA
GCAG----------------------------------------------------------------------------
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--------------------------------------------------------------------------AGCAAG
GAGAGGACACGGACAAGGAGCGAGAGAG---CCACCTATCCTCAAGCCGGCTGATATGAGGCTGC----AGTGACACCCA
ATCGGCCTCCAGCCTCAAGGGGAAGGGA--------AGCACCTTCCCCTTCTTTGCTAGCTATCACTCGCTCCAGCGCTA
-GCTCC---GATGGCCGCCTCCTCCTTCCTCCCGCTCCACCTCCCGGCCTCCCCCAGGCCAGCCACCGTGGCCGCGAGGG
CAGCCTCGGGCGTCGCGTCGACGGTGCCCGCCGCTACTACGCAGACGTCGCAGCTGGAGGAGACCTTCGGCCGGAAGGGC
CTGAGGTTCGGGACGGACGCCACGGGCGCGCCCACGGCGGAGCTGAGCGTGCGCAACGGCAGCTCGCTGCAGCTCCGGCT
CAACGACGGGCTGGTCACGTCGTACCGGCCCAAGGTGTCCTGGGAGGGCGGGGACGGCTGCCGGGAGCTGCTGCACACCG
TGGCCGGCGCCGGCGCGGTCAAGGGCGGCGTGGGGCTGGTGCTCAACGAGGCCTCCTCCTCGTCGTCG------------
CTGCTCGGCGCGTCGGAGTGGTCCGTGACGGACGTGGACTCGGACTCGTACGACGCGGTGCAGGTGGAGCTCGGGTGCGG
CGTGGGCGGCGCCAAGGGGGCCAAGCTGGAGGTGTCGTACGTGGTGACGCTGTACCCGCTGAGCATGGCGACGGCGGTGA
TCGTCAAGAACAACGGGGCCAAGCCGGTGGAGCTGACGGGCGCCGTGCTGAGCCACATCAAGTTCGACAAGCGGCGGGGC
ACGGCCGTGGAGGGGCTCCGCGGCTGCCCCTACTGCTCCCACCCGCCGCCGGCGTCCGGGTTCGCGCTGCTCACCCCCGC
CGAGGCCATGAAGCGGGAGGAGTCCGGGTGGTTTGGCGGCGGCGGCGGGGAGGAGCCGAGGCAGGGCGCCTGGACCGTGG
AGGAGAACCTCTACACCATCCTCAAGAAGAAGGTGAGCAGGGTGTACGCGGCGCCGCCGGAGGAGAGGAAGAAGCGCATC
TACAGCACCGCGCCCTCCAAGTTCACCACCATCGACCAGGTTCGTTCGTCTC----CTTGGGATGCATCCATCGTGCATG
AATGATCATCATTCGTCAGCCGCATTGCTCAGTGATGATATGCT--TTGTGATTTGCTTGGACAGTCTAGCGGGCTCGGG
TTCAGGCTTGTGAGGATGGGGTTCGAGGACCTGTACCTGAGCAGCCCGGGAGGATTGTACGAGAAGTTCGGCAACGACTA
CTTCCTCTGCACCGGGCCGGCGTCCATCCTCGTGCCCGTCGTCGTTGGCCCCGGCGAGGAGTGGAGGGGGGCGCAGGTCA
TCGAGCACGACAACTTGTAACTGTTTT-------------------GAGTTACACAAGGAGGAAATCATGTACATTCTCA
CACATGGGAGTGAATCTTGTAACTGCCAATTGCGATCAATCTGTACACATGCGGTACGCATCTCGTAGCACAAG----TA
ACATACAAATGAATTTTCAAAGGAAATTACATGGGCGTGTGTGAAGAAGACTTGAAAACCTCAAACG-------------
------AACGAGCA-TAAAAATGGACACACTCTCTCATAGAATTCATCGCATCAGCTCAGCATAATCC-----ACTCCAG
ACACAAGCATCTGGTGCAAAGGAAAGAACCCAAGTGCTGGTGACAAGATAATCAAATAAGCGCGC-ATTTGCCGCCACCT
ATTTCTGCCAGGAAAC-GTTTACTCGAGTAAACCCGCATCCTTAAGAGCAGTCTCAAAATTGTCCTCGCTTTTCCAGTTG
GGGACCTCAGGCACTTTGTGCTGGAAGTAGTCCTCGATCTTTGTCATCACAGCTTCATCAGTTTGACCACATAGCAGGTT
GAACACAGCTCCTGTCACCAGCGAAAATTCAGT--------TAGGCCACAAGATAAGCA-CTCTACTCAAC--AGCGATT
AGCTGATAAACTGGCATAACAAAACTTATGTTTCA-----AACTGA----------------------------------
TAAATCATGAAAACAATCAAAGCAAATCAATTGACAGTCTACAGAAATAGGAGATCACAACTTCTCAAGAAAAAAC--GA
AAACGAACA-AACATGACGCCA----ATAAACAACAAACAATGGTCACATCAGTTCTATCTTATCCTAATAAAGGAAGCT
AAAAATCCTATTGCAAAATCCTACTTGCAGAAG------ACTAGTTCTGCCGACAAGTTCAATCTTAGGCTAGGACAAAC
AGGCATCAGGACTAACTAAATGTAGCGTGCTTGCTTATCAATGA-TAACAG-----------------------------
----------------CATTAATGTTTGTCCCGGCGTT-------GACAAAA--TATGCTTTACAGTGGTGTATGTACAT
A---GACTGATAAGAC----------------------------------------------------------------
----------ACAAATTTACCTTTTCGGCCAAAGCGCCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGTT
CATCTCTCGTATTATACTTGATTGGCATGTCGTAGTTGATGACCAGGTTAACCTTTCAAAGGAAGAATGT
>chr4A_2570
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------------------TTTACTCAAGTAAACCAGCATCCTTAAGAACAGTCTCAAAATTCTCCTCGCTCTCCCAGCTG
GGGACCTCCTGTACTTTGTGTTGGAAGTAGTTCTCGATCTTTGTCATCAAAATGTCATCAGTTTCACCGCATAGCAGGTT
GAACACAGCTCCTGTCACGAGCATCGATTCAATTAGGAATATAGCCAACAAAATAAGCA-TTGTAATTGGACAACATGGT
AGCTGATAATATGGCATGAATAATACTCGTGAGTAGACATATTCTATGTTTTTAGTGTACAAAACCTATAAGTATTCAAG
TAAATTGTGTGAACAATCCTAGAAAATCAGTTTACAATCCAAACAAACATATAACATCC---------------------
--------------------------ATAATCGACAAGCAATGGTCACATAAGTTCTATCATATCCTCATAAAGAAGCTC
AGAAA---TTTTGCCAAATCTTATTCACAACATTACCAATCTAATTTTGGTGAGAAGTTCAATCTCAGGCTAGAACATCA
TTAGG------TTTACTAAAGGTAGCATGTTTTCTTATTACT------CAGGTTCAGTCTGCCTTTATCTCCAAGCCATT
TGCA--------------------TTTGTCACGATGTGG-------ACAATCATTATGC-TTATAACGGCTGC-ATGTGA
TATTCTTTACAATTTACACTTGATGTAATTCTAGAATAGAATACAGTAATCATCTCCCTCTATTTGTTTTGGAAAGTATG
CCATACATAAATAAATTTACCTTTTCGGCCAAAGCGCCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGCT
CATCTCTAGAATTATATTTGATTGGCATGTCGTAGTTGATGACCAGATTGACCTTTCAATGGGATAATGT
>chrUn_2570
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------------------TTTACTCAAGTAAACCAGCATCCTTAAGAACAGTCTCAAAATTCTCCTCGCTCTCCCAGCTG
GGGACCTCCTGTACTTTATGTTGGAAGTAGTTCTCGATCTTTGTCATCAAAATGTCATCAGTTTCACCGCATAGCAGGTT
GAACACAGCTCCTGTCACGAGCATCGATTCAATTAGGAATATAGCCCACAAAATAAGCA-TTGTAATTGGACAACATGGT
AGCTGATAATATGGCACGAATAATACTCGTCATTAGACATATTCTATGTTTTTAGTGTACAAAACCTATAAGCGTTCAAG
TAAATTGTGTGAACAATCCAAGAAAATCAGTTTACAATCCAAACAAACATATAACATCC---------------------
--------------------------ATAATCGACAAGCAATGGTCACATAAGTTCTATCATATCATCATAAAGAAGCTC
AGAAT---TCTTGCCAAATCTTATTCACAACATTACCAATCTAATTCTGGTGAGAAGTTCAAGCTCAGGCTAGAACATCA
TTAGG------TTTACTAAAGGTAGCATGTTTTCTTATTACT------CAGGTTCAGTCTGCCTTCATCCCCAAGCCATT
TGCA--------------------TTTGTCACGATGTGGAGTGTGGACCATCATTATGC-TTATAACGGCTGC-ATGTGG
TACTCATTACAATTT--ACTTGATGCAATTCTAGAATAGAATCCAGTAATCATCTCCCTCTATTTGTTTTGCAAAGTATG
CCATACATAAATAAATTTACCTTTTCGGCCAAAGCGCCCAGCTCTGCCAATTATGTGCAGGTACACCTCATAATCAGGCT
CATCTCTAGAATTATACTTGATTGGCATGTCGTAGTTGATGACCAGATTGACCTTTCAATGGAATAATGT
>chr5D_2570
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------------------TTTACTCAAGTAAACCAGCATCCTTAAGAACAGTCTCAAAATTCTCCTCGCTCTCCCAGCTG
GGGACCTCCTGTACTTTATGCTGGAAGTAGTTCTCGATCTTTGTCATCAAAATGTCATCAGTTTCACCGCATAGCAGGTT
GAACACAGCTCCTGTCACGAGCATCGATTCAATTAGGAATATAGCCCACAAAATAAGCA-TTGTAATTGGACAACATGGT
AGCTGATAATATGGCACGAATAATACTCGTCATTAGACATATTCTATGTTTTTAGTGTACAAAACCTATAAGTGTTCAAG
TAAGTTGTGTGAACAATCCAAGAAAATCAGTTTACAATCCAAACAAACATATAACATCC---------------------
--------------------------ATAATCGACAAGCAATGGTCACATAAGTTCTATCATATCATCATAAAGAAGCTC
AGAAT---TCTTGCCAAATCTTATTCACAACATTACCAATCTAATTCTGGTGAGAAGTTCAAGCTCAGGCTAGAACATCA
TTAGG------TTTACTAAAGGTAGCATGTTTTCTTATTACT------CAGGTTCAGTCTGCCTTCATCCCCAAGCCATT
TGCA--------------------TTTGTCACGATGTGGAGTGTGGACCATCATTATGC-TTATAACGGCTGC-ATGTGG
TACTCATTACAATTT--ACTTGATGCAATTCTAGAATAGAATACAGTAATCATCTCCCTCTATTTGTTTTGCAAAGTATG
CCATACATAAATAAATTTACCTTTTTGGCCAAAGCGCCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGCT
CATCTCTAGAATTATACTTGATTGGCATGTCGTAGTTGATGACCAGATTGACCTTTCAATGGAATAATGT
>chr5B_2570
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------------------TTTACTCAAGTAAACCAGCATCCTTAAGAACAGTCTCAAAATTCTCCTCGCTCTCCCAGCTT
GGGACCTCCTGTACTTTGTGTTGGAAGTAGTTCTCGATCTTTGTCATCAAAATGTCATCGGTTGCACCGCATAGCAGGTT
GAACACAGCTCCTGTCACGAGCACCGATTCAGTTAGGAATATATCCCACAAAATTAGCA-TTGTTATTGGACAACAGGGT
AGCTGTTAATTTGGCATGAATAATTTTCATGATTAGACAGATTCTATGTTTTTAGTGTACAAAACATATAAGAGTTCAAG
TAAATTGTGTGAACAATCCAAGAAAATCAGTTTACAATCCAAACAAGCATATAACGTCC---------------------
--------------------------ATAATCGACAAGCAATGGTCACATAAGTTCTATCATATCCTCATAAAGAAGTTC
AGAAT---TCTTGCCAAATCTTATTCACAACATTACCAAACTAATTCTGGTGAGAAGTTCAATCTCAGGCTAGAATATCA
TTAGG------TTTACTAAAGGTGGCATGTTTTCTTATTACT------CAGGTTTGGTCTGCCTTTACCCCCAAGCCTTT
TGCA--------------------TTTGTCACGATGTT-------GACCATTATTATGC-TTATAACGGCTGTTATGTGA
TACTCATTACAATTT--ATTTTATGTAATGCTAGAATAGAATACAGTCATCATCTCCCACTATTTGTTTTGGAAAGTATG
CGATACATAAATAAATTTACCTTTTCGGCCAAAGCGCCCAGCTCTGCCAATTCTGTGCAGGTACACCTCATAATCAGGCT
CATCTCTAGAATTATATTTGATTGGCATGTCGTAGTTGATGACCAGATTGACCTTTCAATGGGATAATGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S------S-------------
--S-----S-------------------------------------S---------------------------------
-------------S------------S---SSSS-------S----------S----------S----------------
-------S-----S---S-S-------S----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------S------------------------------S----------------------
---------------------------------------------------------S---------------------S
--------------S----------------S------S--S--------------------------------------
--------------S--------------------------------S-------------SSSSSSSSS-SS-S-S---
----------SSSS-----SSS-S-SS-S-SSS--SS------S--SSS---SSSSS-SSS-------------------
--------------------------------------------------------------------------------
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-----S-----------------------------------------------------------------S-S------
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------------------------S-S--------------------------------------SSSS-----------
-----------S--------------SS----------------------------------------------------
------SSS-----------------------------------------------------------------------
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-------------------------------------S-----------------------------SSSSSSSSSSSSS
--S-----------S--------------------------------S--------S---------------------S-
--------------------------------------------------------------------------------
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----------------------------------------------------------S---------------------
--------------S-------------------------------------SSSS-------------SSS-S------
-----------------------------------------S---S----------------------------------
------------------------------S-------------------------------------------------
-------------------------------------------------------S-------------S--S-------
---------------------SS--SS-------------------------S-S-S---------------------S-
-----------------------------S-----------------------SSSS-S---SS----------------
---------------S-----S-------------------------S--------------------------------
--------------S-------------S------------------------------------------S--------
-----------------------------------------------------------------S--------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------------------------------S--------------------
-S--S---------S---S--S-S-SSS-S--S-SSSSSS----------------------------------------
--------------S-------------------S--------------------------S---S---------SSS--
---S--S-------SSS-SSSSSSSS------------------------------------------------------
-------------------------------------------------------------SS-----------------
--------S------------------------------S---SS----------------S------------------
----------S------SSS-S------S-------------------------SS------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_304
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--------------------------------------------TTCTTCTCTTCTGCCAGCCG----------------
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>reverse_5063
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----------------------CTTCCTTTTTCTTGCGTGCCA-------------------------------------
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>forward_4790
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--------------------------------------------------TCTTGGCTTGGGATGCATCA----------
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>reverse_6102
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---------------------CTGTCTGGCACGGTGTTGA----------------------------------------
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----------------------------------------------------------------------
