>input_sequence_53698
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-------------------------------------------ATGGAGGATCTCCCGGAGGTACTGCAGGCAGAAATCG
TCCAGAGGATTACCAGGACAAGCGATCTGAATTCTCTTTCCCTTGTGTCAAAAAGTCTGTGCGTCGTTGAGGCGAATCAA
AGGGCCTCTATCCACTTAGGATGCAGCTTGTTTTCTGCTACAGAAACCTTGTCATCGCTTTGTTCCCGATTCTCCAATTT
GTCGAAAATGGAAATCAATTACACCGGTCAAACCTTGAGCTTCTTCTCATACATTGATGATTCTGGTCTTAGTTGTCTAG
CCAATTGTAAGAAGTTGATGTCGCTCACACTAAACTCTGTACCAAGCATAACTTCAAGGGGACTTCTCTCGGTGGCAATT
GGCTGCAACAATTTATCTGCTCTCCACCTTATTGATTGCAAGAAAATAAGCAGCGGAGAGTGGCTAGAGTACCTTGGCTG
GAATGGATCACTGGAAGAACTTGTAGTAAGGAATTGCAACAGAATCAGGCAGCCTGACCTACTAAAGTTTGGTCCAGGAT
GGATGAAGCTTTGGAAGTTTGAGTTTGAGAGCAAGGTAGAAATAGATGATATGCTTGGGTTTAATGATC-----------
----CCTTATATGATGTGCACAACCCGAGTGCATGTGATTTCCTCTGTGACAATTTGAAGGATTTGAGGTTGGTGCATAT
TCAAGCAAGGTCAGAGCTGAGACTTTGTCTTCTCTTGGGGAAATGCAAAGCATTGGAGAAGCTATGCCTTAAGTATGTTG
TAAGTCTAACCGACAATGACATGATTGCGCTATCCCACAGCTGCAACAATCTTAAAAGCATTTCACTATGGCTCATGCCT
CCTCAGTATGTTGCCGATGACAATGATTTTCTTTACATACCATCGGTTACTGATCACAGTCTTCAGGCTTTAGCTCTCGG
TTGTCCTATGCTTCAGAGCGTTGAACTTACATTTCATGAGGGCACATTCTACTTGC---CAGATATAGGCTTAACACTAG
AGTGCGTTAGGATTCTCATTCAGTCTTGTCAGATTCGTGTTCTTGTGCTTAACGGAGCTGACTTCTTTGATGATGAAGGG
ATGATGGTACTTTCATCCTCACCATTCCTGGAGACACTCGAGCTTGCGGTGAACGATCGGGTAACAGATGCTGGGATGCA
TTCCATTGCGCGCACCCCGTGCTTGAGGAGTCTGACACTCCGGTTGTGTAGTCAGGTGACTGATGCTGGATTAACCGAGC
TGGTACATTCACAGAAGTTGGATTCTCTGATCATCGAAGGATGTGCTTGCATCTCTCCGCAAGTTGCCCAAGGCGCAGCT
AGATCAGTTCACTACTCTCTGGAGTCAGCAAGCAGGAACCGTCTCAGTAGAATATAA-----------------------
--------------------------------------------------------------------------------
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-----
>chr5B_1_TraesCS5B01G105100
ATCAGGACGGGTCTCACCTGATTTATATGAGACCTGGTCTCATATAAATTTTTTCCCGTGCGTGGGCGACCGACCCAACA
CGTGATTGATGACTCGCAAGAATCGTTTACGTCATTTTTGGTAAGTATATAGTATTACTAAAACCATACCAAAATAATTT
GGTATTTATCGAAATCAAACGCATTTAAAGTCATATCGTATTTATCAAAATATAAATGCATATTTACCATATATATAACT
GAATGGCCAGGCTACCATTCCCCAGCCCCCAGTCCCCTCTCAACCAGAGAGGGGAGCCAAGTCCACAGCTGGCGTGGAGG
TGGTTCACCAATCCAAGATCAAGCAGAGGCGGAAGGCGCCGCCTGGCTTCTCTTGCTCCGATAGATCTATTGTTGTCGTC
TCTCCTTCTCTCCTACCGTCGCGTTTTCCAAATTCCAGGTACTAAAAAAAGCAACTCTTGTCCTTCTGTGTTCGTCTATT
GTGTTCCGTAGGTGTGCAGCCTTGTCTGCCCTCCTCTCTCTATATCTCTCGCTCTCTTTTGGTTCTTGATCCAAAAGTGA
TGAGCGTAAATGGAGCAAACCGGCCGGTAATATGCCTAAGCTGCAACGTTGAAGCAAATATTAACCAGACCTCATATTGC
CTTCTATGTCATTTACTTAATTAAGTGCTTCTAGATCATCGCATCAGTATGTCTGGGATCATCGTTATCTTAGTGAACAA
CCCCATTCTTTCTGGCCCAGCTGCCTTTGAATATGT-AAGATTAGTGCAACAGTTTTCTCTCACAAACTTGTGGCAGTTC
TAGTTTATATCTTTGTAGATTA--GCTGGAGTGATTTTTGTGACCAAGATTAGAACATAGATTTTCACCAGTGTGTTCTT
CGTGATTAACATTGGTGTGATATCATTGTCACATGCTTCGCTCTTGTATTTCATTAATTTCATTCCAGCACTTCGGTTAC
CCGCTGAACCTTGAGATTGCCCAATTTACAGCTGCATTGCTCGATGGAGGATCTCCCGGAGGTACTGCAGGCAGAAATCG
TCCAGAGGATTACCAGGACAAGCGATCTGAATTCTCTTTCCCTTGTGTCAAAAAGTCTGTGCGTCGTTGAGGCGAATCAA
AGGGCCTCTATCCACTTAGGATGCAGCTTGTTTTCTGCTACAGAAACCTTGTCATCGCTTTGTTCCCGATTCTCCAATTT
GTCGAAAATGGAAATCAATTACACCGGTCAAACCTTGAGCTTCTTCTCATACATTGATGATTCTGGTCTTAGTTGTCTAG
CCAATTGTAAGAAGTTGATGTCGCTCACACTAAACTCTGTACCAAGCATAACTTCAAGGGGACTTCTCTCGGTGGCAATT
GGCTGCAACAATTTATCTGCTCTCCACCTTATTGATTGCAAGAAAATAAGCAGCGGAGAGTGGCTAGAGTACCTTGGCTG
GAATGGATCACTGGAAGAACTTGTAGTAAGGAATTGCAACAGAATCAGGCAGCCTGACCTACTAAAGTTTGGTCCAGGAT
GGATGAAGCTTTGGAAGTTTGAGTTTGAGAGCAAGGTAGAAATAGATGATATGCTTGGGTTTAATGATC-----------
----CCTTATATGATGTGCACAACCCGAGTGCATGTGATTTCCTCTGTGACAATTTGAAGGATTTGAGGTTGGTGCATAT
TCAAGCAAGGTCAGAGCTGAGACTTTGTCTTCTCTTGGGGAAATGCAAAGCATTGGAGAAGCTATGCCTTAAGTATGTTG
TAAGTCTAACCGACAATGACATGATTGCGCTATCCCACAGCTGCAACAATCTTAAAAGCATTTCACTATGGCTCATGCCT
CCTCAGTATGTTGCCGATGACAATGATTTTCTTTACATACCATCGGTTACTGATCACAGTCTTCAGGCTTTAGCTCTCGG
TTGTCCTATGCTTCAGAGCGTTGAACTTACATTTCATGAGGGCACATTCTACTTGC---CAGATATAGGCTTAACACTAG
AGTGCGTTAGGATTCTCATTCAGTCTTGTCAGATTCGTGTTCTTGTGCTTAACGGAGCTGACTTCTTTGATGATGAAGGG
ATGATGGTACTTTCATCCTCACCATTCCTGGAGACACTCGAGCTTGCGGTGAACGATCGGGTAACAGATGCTGGGATGCA
TTCCATTGCGCGCACCCCGTGCTTGAGGAGTCTGACACTCCGGTTGTGTAGTCAGGTGACTGATGCTGGATTAACCGAGC
TGGTACATTCACAGAAGTTGGATTCTCTGATCATCGAAGGATGTGCTTGCATCTCTCCGCAAGTTGCCCAAGGCGCAGCT
AGATCAGTTCACTACTCTCTGGAGTCAGCAAGCAGGAACCGTCTCAGTAGAATATAAACATAATGCTGTTGATCAAGTAG
ATAAAGTTATTTTCGGTTGTGCCTCATTAGTGGATGTCGCTGGCGTTGACCCTGCTATCATTTTCATCATTTCTCAGAAC
CTGTGTCTAATGGTGAACTTTGGATCCAATGTGGCGAATGAAGTCTTTAAAATTGTCTGTTACTGGTGTACTGAACCTAC
TTATGTTGCTTTGCTCCTGTAGCTTAATTTCTCCATGTCCGCCATCTTGAAAATTGTCATAAGTCAACCACAAGATAAAC
ATTTCAGGTGTTCAACTTGTAGGTCCTAACAGTGCCTCTCGTTTCTATGTGGTGTATGAACATGACAACTTGTGTGTTAT
TATTGCCGTTATATTGTACTAGTAGCATACTTACGAAGTTGTGGTGTTACCAAGAGAAGGAGTAGGGATCATTGAACCCA
TGCATATCATATATTTCTCCGATCAGGATGTAATGTAAGTGTCATCCCAAAAGATGTACCATATTTGTAGCCTCCATAAT
GTATTGTATAATGTAGTATATTATAACTTATAAGCGCTCCATCATAGTTTGGATCGTTTTGGAGTCTGTCGAGGTGAGAG
TCTACCAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATGTGT
GTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTCACACCCAAATGGTACTTCTAAACTTTTAGGGGGAAAGCAAGCAAAAAA
AAAAAAACAAGTCG-ACAACAAGTGTAACCTTCAAATGGTACACTTAACATTGCTTTTTCCTCGACGAAGCACTGCTATC
CCGTTCCGCATGAAAATTGGCAGGAC-GCTTGTTACACTAATACGAACATCTAGAGAAGAAATCATAATTTTTAGAACTT
ACTTTCCGTTTGTTTTTAATGTATTGTTCACCGTAATGTCGATTAGCGATATTTTCATACATAATTAGTAGCAGAGGTGT
TGAAAATTTGCCTTACAAATATGTAGCAGCTATAGCCTGCATTTTGCACCCCAGCTGATGGTGAATGCTATGCACTGGGC
ACATG
>chr5D_58
GTA---------------------------------------------------------CGTGGGCGACCGACCCAACA
CGTGATTGATGGCTGGCAAGAATCGTTTACGTCATTTTTGGTAAGTATATAGTATTACCAAAACCATACCGAAATAACTT
GGTATTTATTGAAATCAAT-GCATTTAAATTCATATCGTATATAT---------------------------ATATAACT
GAATGGCCTGGCTACCATTCCCCAGCCCCCAGTCCCCTCACAACCGGAGAGGGGAGCCAAGTCCACAGCTGGCGTAGAGG
TGGTTCACCAATCCAAGATCAAGCTGAGGCGGAAGGTGCTGCCCGACTTCTCCTGCTCTGGCAGATCTACGGTTGCCGCC
TCTCCTTCTCTTCTGCCGTCGCGTTTTCGTGATTCTAGGTACTAAAG-AAGCAACTCTTGTCCTTCTGTGTTCGTCTATT
GTGTTCCGTAGGTGTGCAACCTTGTCTACCCTGCTCTCTCTATATCTCTCGCTCTATTTTGGTTCTTGATCCAAAAGTGA
TGAGCGTAAATGGAGCAAACCGGCCGGTAATATGCCCAAGCTGCAACGTTGAAGCAAATAGTAACCAGACCTCATATTGC
CTTCCATGTCATTTACTTAATTAAGTGCTTCTGGATCATCACATCAGTAT-------------GTTATCTTAGTGAACAA
CTCCATTCTTTCTGGCCCAGTTGCCTCTGAATATGTAAAGATCAGTGCAACAGTTTTCTCTCACAAACTTGTGGCAGTTC
TAGTTTATGTCTTTGTAGATTACTGCTGGAGTGATTTTT-TGACCAAGATTAGAACATAGATTTTCACCAGTATGTTCTT
CGTGATTAACATTGGTGTGATATCATTGTCACATGCTTCGCTCTTGTATTTCATTAATTTCATTCCAGCACTTTGGTTGC
CCGCTGAACCTTGAGATTGCCCAATTTACAGCTGCATTGCTCGATGGAGGATCTTCCGGAGGTACTGCTGGCAGAAATCG
TCCAGAGGATTACCAGGACAAGTGATCTGAATTCTCTTTCCCTTGTGTCAAAAAGTCTGTGCGAGGTTGAGGCGAATCAA
AGGGCCGCTATCCGCTTAGGATGCAGCTTGTTTTCTGCTACAGAAACCTTGTCATCGCTTTGTTCCCGATTCTCCAATTT
GTCAAAAATGGAAATCAATTACACCGGTGAAACCTTGAGCTTCTTCTCATACATTGATGATTCTGGTCTTAGTTGTCTAG
CCAATTGTAAGAAGTTGATGTCCCTCACACTAAACTCTGTACCAAGCATAACTTCAAGGGGACTTCTCTCGGTGGCAATT
GGCTGCAACAGTTTATCTGCTCTCCACCTTATTGATTGCAAGAAAATAAGCAGCGGAGAGTGGCTAGAGTACCTTGGCTG
GAATGGATCACTGGAAGAACTTGTGGTAAGGAATTGCAACAGAATCAGGCAGCCTGACCTACTAAAGTTTGGTCCAGGAT
GGATGAAGCTTTGGAAGTTTGAGTTTGAGAGCAAGGTAGAAATAGATGATATGCTTGGGTTTAATGATC-----------
----CCTTATATGATGTGCACAACCCGAGTGCATGTGATTTCCTCTGTGACAATTTGAAGGATTTGAGGTTGGTGCATAT
TCAAGCAAGGTCAGAGCTGAGACTTTGTCTTCTCTTGGAGAAATGCAAAGCATTGGAGAAGCTATGCCTTAAGTATGTTG
TAAGTCTAACCGACAATGACATGATTGCGCTATCCCACAGCTGCAACAATCTTAAAAGTATTTCACTATGGCTCATGCCT
CCTCAGTACGTTGCTGATGACAATGATTTTCTTTACATACCATCGGTTACTGATCACAGTCTTCAGGTTTTAGCTCTCGG
TTGTCCTATGCTTCAGAGCGTTGAACTTACATTTCATGAGGGCACATTCTACTTGC---CAGATATAGGCTTAACACTAG
AGTGTGTTAGGATTCTCATTCAGTCTTGTCAGATTCGTGTTCTTGTGCTTAATGGAGCTGACTTCTTTGATGATGAAGGA
ATGATGGTACTTTCATCCTCACCATTCCTGGAGACACTCGAGCTTGCGGTGAACGATCAGGTAACTGATGCTGGGATGCA
TTCCATTGCGCGCACCCCTTGCTTGAGGAGTCTGACACTCCGGTTGTGTAGTCAGGTGACTGATGCTGGATTAACCGAAC
TGGTACATTCACAGAAGTTGGATTCTCTGACCATCGAAGGCTGTGCTTGCATCTCTCCGCAAGTTGCCCAAGGCGCAGCT
AGATCAGTTCACTACTCTCTGGAGTCAGCAAGCAGGAGCCGTCTCAGTAGAATCTAAACATAATGCTATTGGTCAAGTAG
TTAAAGTTATTTTCGGTTGTGCCTCATTTGTGGATGTCGCTGTCATTGACCCTGCTATCGTTTTCATCATTTCTTAGAAC
CTGTGTCTAATGGTCAACTTTGGATCCAATGCGGTGAATGAAGACTTTAAAATTGTCTGTTACTGGTGTACTGAACCTAT
TTATGTTGTTTTGCTCATGTAGCATAATTTCTCCATGTCTGCCATCTTGAAAATTGTCATAAATCAACCACAAGATAAAC
ATTTCAGGTGTTCAACTTGCAGGTCCTAACAGTGCCTCTCGTTTCTATGTGGTGTATGAACATGACAATTTGTATGTTAT
TACTGCCTTTATATTG----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_1229
--------------------------------------------------------------------------------
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-------------------------------ACCTTAAGCTTCTGCTCATGCATCGATGACTCTGGGCTTGGTTGCTTAG
CGAATTGCAAGAAATTGGTGTCTCTCAGGCTGAACTCAACACCACAAATAACTTCGATTGGGCTTTTCTCGGTTGCAGTT
GGTTGCACAAGTCTATCTGCTCTCCACCTTATTGGTTGCGAGAAAATCAACAGTGTAGAGTGGCTGGAATACCTTGGTAG
GGATGGATCGTTGGAAGAGCTTGTAGTGGAGAATTGCAAAGGAATCAATCATCATGACATCCTAAAGTTTGGTCCAGGAT
GGATGAAGCTCCAGAAGTTTGAGTTTGAGAGGAAAAGAGGAAAATATGATAGTCTTATAGCCGTAGGTGGTAAGGTCTAT
GACTCCTCGTACGATGCTCACAGCATAGATATATATGATTTTTGCTGTGAGAGTTTGAAGGATTTAAGGTTGGCGCATAT
TAAAACTTGGCCAGATGTAGGACTTCGTGTTGTCCTAGGGAAGTGTAAAGCATTGGAGAAGCTTTGCCTTGAGTATGTTC
ATGCCCTAAATGATAATGACATGATTGCATTATCTCGGAGCTGCAGCAACCTTAAAAGCATCTCACTTTGGCTCAACCTG
CAGCTTTACTCTAGTGATGTCGGCTATTGTGAAACCAGGACGTCATTTACTGATAACAGCCTTTACGCTCTAGCCCTAAA
CTGTCGTATGCTTCAGATCATAGACCTCAGCTTTACAGGATGTTCTCGTGACTGGCCATCAGAAATAGGATTCACACAAG
AGGGTTTTCTGGTGCTCATTCAGTCTTGCCCGATTCGTGTTCTCGTGCTCAACAACGCCAACTTCTTTGATGACGAGGGG
ATGAAGGCCCTCGCATCCTCGCCTCATCTGGAGACACTCGAGCTTATATTGTGCCATGCGGTAACTGATGCTGGGATGCG
CTTCATTGCGCACAGCCCATGCTTGAGTAATCTCGCACTTCGGATGTGTCATAACGTTACTGATGTCGGAGTGGCTGAAC
TGGGACGTGTACATAAGTTAGAGTCTTTGGTCATTGAGTATTGTGGTGAGATCTCTCTGGAAGCTGCGCAGGGTGTTGCC
AAGTCGGTTCACTACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_1229
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-------------------------------ACCTTAAGCTTCTGCTCATGCATCGATGACTCTGGGCTTGCTTGTTTAG
CTTATTGCAAGACATTGGTGTCTCTCAGGCTCAACTCCGCACCAAAAATAACGTCAGTTGGGCTTTTCTCGGTTGCAGTT
GGCTGCACAAATCTTTCTGCTCTTCACCTTACTGATTGCGATGAAATCGACAATGTAGAGTGGATGGAATACCTTGGTAG
GGATGGATCGCTGGAAGAGCTTGTAGTGAAGAATTGCAAAGGAATCAATCATCATGACTTCCTAAAGTTTGGTCCAGGAT
GGATGAAGCTCCGGAAGTTTGAGTTTGAGAGGAAAAGAGGAAGATATGATCTTCTTGATCCAGGTAATGT---GGTCTAT
GACTCCTCGTACGATGCTCACAGCATGGATGTATACGATTTCTTCTGTGAGAGTTTGAAGGATTTAAGGTTGGCGCATAT
TGAAACTTGGCCAGAAGTAGGACTTCGTGTTGTCCTAGGGAAGCGTAAAGCATTGGAGAAGCTTTGCCTTCAGTATGTTC
GTGCCCTAAATGACAATGACATGATTGCATTATCTCGGAGCTGCAGCAACCTTAAAAGCATCTCACTTTGGCTCAACCTG
CAGCGCTACTCGAGTGATGTCAACTATTGTGAGACCAGGACGTCATTTACTGATAACAGCCTTTACGCTCTAGCCCTCAA
CTGTCGTATGCTTCAGATGATAGACCTCGGCTTTATAGGATGTGATGCTGACTGGCCATCAGAAATAGGATTCACACAAG
AGGGTTTTCTGGTGCTCATCCAGTCCTGCCCAATTTGTGTTCTTGTACTCAACAACGCCAACTTCTTTGATGACGAGGGG
ATGAAGGCCCTCTCATCCTCGCCTCATCTGGAGACACTCGAGCTTATATTGTGTCATGCGGTAACTGATGCCAGGATGCG
CTTCATTGCGCACACCCCATGCTTGAGTAATCTCACACTTCGGATGTGTCATAACATTACTGATGTTGGAGTGGCTGAAC
TGGAAGATGCACAGAAGTTAGAGTCTTTGGTCATCGA-------------------------------------------
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>chr1B_1229
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-------------------------------ACCTTAAGCTTCTGCTCATTCATCGATGACTCTGGGCTTGCTTGTTTAG
CTTATTGCAAGACATTGGTGTCTCTCAGGCTCAACTCCGCACCAAAAATAACGTCATTTGGGCTTTTCTCGGTTGCAGTT
GGCTGCACAAATCTTTCTGCTCTCCACCTTACTGATTGCGATGAAATCGACAATGTAGAGTGGCTGGAATACCTTGGTAG
GAATGGATCGTTGGAAGAGCTTGTAGTGAAGAATTGCAAAGGAATCAATCATCATGACTTCCTAAAGTTTGGTCCAGGAT
GGATGAAGCTCCAAAAGTTTGAGTTTGAGAGGAAAAGAGGAAGATATGATAGTCTTATAGCCATAGGTGATGAGGTCTAT
GACTCCTCGTACGATGCTCACAGCATGGATATATATGATTTCTGCTGTGAGAGTTTGATGGATCTAAGGTTGGCGCATAT
TGAAACTTGGCCAGAAGTAGGACTTCGTGTTGTCCTAGGGAAGTGTAAAGCATTGGAGAAGCTTTGCCTTGAGTATGTTC
GTGCCCTAAATGACAATGACATGATTGCATTATCTCGGAGCTGCAGCAACCTTAAAAGCATCACACTTTGGCTTAAGCTG
GAGCGCTTCTCGAGTGATGTCAGCTATTGTGAAAGCAGGACGTCATTTACTGATAACAGCCTTTACGCTCTAGCCCTAAA
CTGTCGTAAGCTTCAGATGGTAGACCTCAGGTTTACAGGATGTTCCCGTGACTGGCCATCAGAAATAGGGTTCACACAGC
AGGGTTTTTTGGTGCTCATTCAGTCCTGCCCGATTCGTGTTCTCGTGCTCAACAACGCCAACTTCTTTGATGACAGGGGG
ATGAAGGCCCTCTCATCCTCACCACATCTGGAGACACTCGAGCTTATATTGTGTCATGCGGTAAATGATGTTGGGATGCG
CTTCATTGTGCACACCCCATGCTTGAGTAGTCTCACACTTCGGGCGTGTCATAAGGTGACTGATGTAGGAGTGGCTGAAC
TGGGACGTGCACATAAGTTAGAGTCTTTGGTCATTGAGCATTGTGGTAGGGTCTCTTTGCAAGCTGCACAGGGTGTTGCC
AAGTCAGTTCACTACTC---------------------------------------------------------------
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>chr6A_1229
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-------------------------------ACCTTAAGCTTCTGTTCATGCATTGATGACTCTGGGCTTGGTTGCTTAG
CGAATTGCAAGAGATTGGTGTCTCTCAGGCTGAACTCCACACCACAAATAACTTCGATTGGGCTTTTCTCGGTTGCAGTT
GGTTGCACAAGTCTATCTGCTCTCCACCTTATTGATTGCGAGAAAATCGACAGTGTAGAGTGGCTGGAATACCTTGGTAG
GGATGGATCGTTGGAAGAGTTTGTAGTGAAGAATTGCAAAAGAATCAATCATCATGACTTCCTAAAGTTTGGTCCAGGAT
GGATGAAGCTCCAGAAGTTTGAGTTTGAGAGGAAAAGAGGAAAATATGATAGTCTTATAGCCGTAGGTGGTAAGGTCTAT
GACTCCTCGCACGATGCTCACAGCATGGATATATATGATTTTTGCTGTGAGAGTTTGAAGGATTTAAGGTTGGCGCATAT
TAAAACTTGGCCAGATGTAGGACTTCGTGTTGTCCTAGGGAAGTGTAAAGCATTGGAGAAGCTTTGCCTTGAGTATGTTC
ATGCCCTAAATGATAATGACATGATTGCATTATCTCGGAGCTGCAGCAACCTTAAAAGCATCTCACTTTGGCTCAACCTG
CAGCTTTACTCTAGTGATGTCGGCTATTGTGAAACCAGGACGTCATTTACAGATAACAGCCTTTACGCTCTAGCCCTAAA
CTGTCGTATGCTTCAGATCGTAGACCTCAGCTTTACAGGATGTTCTCGTGACTGGCCATCAGAAATAGGATTCACACAAG
AGGGTTTTCTGGTGCTCATTCAGTCCTGCCCGATTCGTGTTCTCGTGCTCAACAACGCCAACTTCTTTGATGACAAGGGG
ATGAAGGTCCTCGCATCCTCACCTCATCTGGAGACACTCGAGCTTATACTGTGCCATGCAGTAACTGATGTTGGGATGCG
CTTCATTGCGCACACCCCATGCTTGAGTAATCTCACACTTCGGATGTGTCATAACGTTACTGATGCCGGAGTGGCTGAAC
TGGGACGTGTACATAAGTTAGAGTCTTTGGTCAT----------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_2702
--------------------------------------------------------------------------------
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--TTCCCTTTATATTGTACTAGTAGCATATTTAAGAGGTTGTGGTGTTACCAAGAGAAGGACTAGGGATCATTGAACCCA
TGCATATCATATATTTCTCCGATCAGGATGTAA-----GTGTCATCCCAAAAGATCTGCCATATTTGTAGCCTCCATAAT
GTATTGTATAATGTAGTATATTG-------TAGGCGCTCCATAATAGTTTGGATCATTTTGGAGTCTGCCGAGGTGAGAG
TCTGCCATTGTAGAGCCTTCATTTTTTTGATGCATCAAATCAATAATCCTACACTCGATTGGATGGATTCAACATTTAAA
TTGGGATAAAATTTCATTGCCAAGTTCTTATATAGGGGCAAAAATGTCGGTTATTGCTTTTGGCTCAAGGGAGTATATGC
TCCTGCCGTCAAAAATGTATTTTGCCGAGATCAATATATATATATACACACACATATACATACATCCAGCCTATATGTGT
GTG-----------------------------------------------------------------------------
-AAAAAACAAGTCAAACAACAAATGTTACCTTCAATTGGTACACTTAACATTGTTTTTTCCTCGACAAAGCACTGCTATC
CTGTTCCGCATGAAAATTGGCAAGCATGCTTGTTACACTAACACAAACATCTAGAGAAGAAATCATAATTTTTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
-----------S--S-------------------------------------------S-----------S------S--
---------S--------SS---------S-----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------S------------------------------S-----S-----------------------------S----
------------------------S-----------S--S---S-S------S-----S-SS-------SS----S--S-
-----------S--S-------------SSS----S----------SS--------------------------------
------------------S--------S----S----------------------S------------------------
------------------------------------S-----------------------S-------------------
----S---------------------------S-------S---------SSSSSSSSSSSSS-----------------
-S------------------S-----S---------------S-------------------------------------
--------S------------------------------S--------------------------------S-------
-------------------------------------------------------------------------S----S-
------------------------------------------------------S-------------S-----------
----------------------S----------------------------------------SS---------------
------S------S------------------------------------------------------------------
---S------------------------S---------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
----------------------------------------------------------S------S--------------
------------------S-----------------------------------------------------------S-
----------------------------------------S---------------------------------------
-------------------------------------S---------------S-------------S---S--------
S---------------------------S-------------S-S--------------S--------------S-----
--------------S----------------S--S--------S-----------------------------------S
--------S-------S------S---------------S----------------------S-----------------
-------------------S------------------------------------------------S----S------
-------S---------------------S---S--S------------------------S------------------
---------------------------------SSSSS-----------------S-S----------------------
----------------------SSSSSSSS--S---------S------------S------------S-----------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S------------S--------S---S--------S-----------------S------------S-------------
-S--------------------S-SS---------------S--S-----------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_508
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------TAGGTGTGCAGCCTTGTCTG----------------------------------------------------
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>reverse_2281
--------------------------------------------------------------------------------
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----------------------------------------ATGTGCTTGCATCTCTCCGC--------------------
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>forward_1855
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TGCCT
CCTCAGTATGTTGCC-----------------------------------------------------------------
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>reverse_3581
--------------------------------------------------------------------------------
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------------------------------------------------------------GTGAATGCTATGCACTGGGC
-----
