>input_sequence_53694
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------------------------------------------ATGTGGGTGGCGGAGCGGGTGCTGGGGGAGCGCCGGAT
GCGGGAGATCCAGCGCTTCACCCGGAACGCCAAGCTCACCGTCGTCTGCCTCATGCTCACCATCCTCGTGCTCCGCGGCA
CCGTCGGGGCGGGCAAGTTCGGCACGCCGCAGCAGGACCTCACCGAGCTGCGCCACCGCTTCATCTCCCACCCGCAGCGC
GCGCTCTCCGAGCACCACGACGCCCGCTCCAAGGCCTCCGACGCCCAGGCCCAAGCCACCAAGG---CCGCGGGGAAGGC
CGCCGCCCGGGACGACGAGCCGGAGCCGCAGCCCAGGTCGCTCCGGGACCCGCCCTACACGCTCGGCCCCAAGATCTCCG
ACTGGGACGAGCAGCGGGCCGCCTGGAACCGCCGCCACCCGGAGACCCCGCCCTTCCTCAACGACGTCAAGCCGCGGGTC
ATGCTCGTCACGGGGTCCTCCCCCAAGCCCTGCGAGAACCCCGTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAA
AATCGACTACTGCCGCATCCACGGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGCTCGCCGGCTTCTGGG
CCAAGCTCCCGCTCCTCCGCGCGCTCCTCCTCGCGCACCCGGAGGTCGAGTTCTTCTGGTGGATGGACTCCGACGCCATG
TTCACCGACATGGCATTCGAGCTGCCGTGGGAGCGCTACGGCCCCTACAACTTCATCCTGCACGGCTGGGACGAGATGGT
CTACGACGACAAGAACTGGATTGGTCTCAACACCGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTCGATTACCTCG
ACACCTGGGCGCCCATGGGGCCGAAGGGCCCTGTTCGTATTGAGGCTGGAAAGGTGCTCACCAAGTACCTCAAGGACCGG
CCGGTCTTTGAAGCCGATGATCAGTCGGCCATGGTGTATATCCTCGCTACCCAGCGTGAGAAATGGGGTAACAAGGTGTA
TCTCGAGAATGGCTACTACCTCCATGGCTATTGGGGGATCTTGGTGGACAGGTACGAGGAGATGCTTGAGAATTACCAGC
CAGGGCTCGGCGATCATCGGTGGCCACTGGTCACTCACTTTGTCGGGTGCAAGCCATGCTCCAAGTTTGGGGATTACCCT
GTTGAGCGGTGCCTCAAGCAGATGGACCGTGCCTTCAATTTCGGGGATAACCAGGTGTTGCACATGTATGGGTTTGAGCA
CAAGTCTCTTGCGAGCAGGAGGATCAAGAGGATCAGGAATGAGACCAGTGACCCTCTTGATATGAAGGATGATTACGGGT
TGCTCCACCCAGCGTTCAAGGCCCTCAAGACTAC----------------------------------------------
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-------------------------------------TACATGA------------------------------------
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---------
>chr4D_1_TraesCS4D01G189500
AGACAAATTTAAGACAAGAATTTTGGGACGGAGGGAGTACAACTTATATTTTGTTAGTGAAATACACGGTTGAAGAAGAA
GACTAATAAACCAGGACGGTAGTAGCATGTTATACATGTTTTGGTTAATTTTTTTTTAAATCTCCAACGGACTTTTCATT
TTTCACCGTATGAAAA-GATTGTAAATTTAGGAGGGTGACATGTGACTATCATCGTCAGGCCTGTAACATCAAGTCTAAC
GTTGCAGTGGATATGGA---------------------------------------------------------------
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---------------------------------------------------------------------------ATTTT
TAGCTAGGAAAGCTACATTTCCATCGCTTTTATCCGTAACGAGCAGCTACTTATCGAAGTAGAAAT--------------
-------------------------------------------------GCATTACTAGCAGCAACGGGCAAACCCGGTT
ACCCGCAGAGCCAGAC------AGCAACCCAGACCCGGTCGCACCCATACGAGTACGAACGATTAACCCCTGACCCATCC
GAGCCCACTGAAAC------------------------------AACGGGCACCGTTCCTTCCCCCACGTCCCGCCAGGA
CCCATCCGTCATTGACCT----A----------------G---CATCAAATCAAACCAACCAACGGGAATTTATTATACC
AA-GGAATAATAAATTACT-----TGTATTACTTACCGGGCGAGGCGACACGGGGGAAGGGAAAAGG--AGGAGTAGAAG
CATCGGGTGC-----ATCTCCGCGTCCCGCTGCCATTCCTTCCTTCCTTC-----TCTGCTCT---TGGCCTTCTTCCTC
CTTCCCCAAGGCGAGAATCCGCGGCGGATTGACCCGATTTCGATCCCGTCTCCAGATTTCC--------TCCACCTCCAG
ACACCCACCGCAATCCGCTCCCCCTCAACGT----------GCGCGCCCGCGCAATCCCACTCGCCCCCATCCTTATTAA
TTCCCCTTCCCTTCCCCACCTCTAAACCTCCTCCTCCTCCTCTTCCTCCCCGGCCTCGTCCCCGTCCCCGTCCCGCA---
---CCGCCGCCGCATTGCTCGGCCGCGGCGTCGATCTAGACTCT-TAGGGGCGTCTGCATTTCT-GTGTTTTC-------
GTTCGATTCGGCTCGGCGCTCGATCCGAGAAGA-------AAATGTGGGTGGCGGAGCGGGTGCTGGGGGAGCGCCGGAT
GCGGGAGATCCAGCGCTTCACCCGGAACGCCAAGCTCACCGTCGTCTGCCTCATGCTCACCATCCTCGTGCTCCGCGGCA
CCGTCGGGGCGGGCAAGTTCGGCACGCCGCAGCAGGACCTCACCGAGCTGCGCCACCGCTTCATCTCCCACCCGCAGCGC
GCGCTCTCCGAGCACCACGACGCCCGCTCCAAGGCCTCCGACGCCCAGGCCCAAGCCACCAAGG---CCGCGGGGAAGGC
CGCCGCCCGGGACGACGAGCCGGAGCCGCAGCCCAGGTCGCTCCGGGACCCGCCCTACACGCTCGGCCCCAAGATCTCCG
ACTGGGACGAGCAGCGGGCCGCCTGGAACCGCCGCCACCCGGAGACCCCGCCCTTCCTCAACGACGTCAAGCCGCGGGTC
ATGCTCGTCACGGGGTCCTCCCCCAAGCCCTGCGAGAACCCCGTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAA
AATCGACTACTGCCGCATCCACGGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGCTCGCCGGCTTCTGGG
CCAAGCTCCCGCTCCTCCGCGCGCTCCTCCTCGCGCACCCGGAGGTCGAGTTCTTCTGGTGGATGGACTCCGACGCCATG
TTCACCGACATGGCATTCGAGCTGCCGTGGGAGCGCTACGGCCCCTACAACTTCATCCTGCACGGCTGGGACGAGATGGT
CTACGACGACAAGAACTGGATTGGTCTCAACACCGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTCGATTACCTCG
ACACCTGGGCGCCCATGGGGCCGAAGGGCCCTGTTCGTATTGAGGCTGGAAAGGTGCTCACCAAGTACCTCAAGGACCGG
CCGGTCTTTGAAGCCGATGATCAGTCGGCCATGGTGTATATCCTCGCTACCCAGCGTGAGAAATGGGGTAACAAGGTGTA
TCTCGAGAATGGCTACTACCTCCATGGCTATTGGGGGATCTTGGTGGACAGGTACGAGGAGATGCTTGAGAATTACCAGC
CAGGGCTCGGCGATCATCGGTGGCCACTGGTCACTCACTTTGTCGGGTGCAAGCCATGCTCCAAGTTTGGGGATTACCCT
GTTGAGCGGTGCCTCAAGCAGATGGACCGTGCCTTCAATTTCGGGGATAACCAGGTGTTGCACATGTATGGGTTTGAGCA
CAAGTCTCTTGCGAGCAGGAGGATCAAGAGGATCAGGAATGAGACCAGTGACCCTCTTGATATGAAGGATGATTACGGGT
TGCTCCACCCAGCGTTCAAGGCCCTCAAGACTAC----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TACATGATAACTATAGTACACTACTTCCACGTTTATTTTGTTC
GTTCGTTCTAGATTCTCTTGGATCAAAATCCTATAATTCTTCTTTTTGTAGACTCAGGGTAACAAGGAAATCTGGTTTTG
GTATCAGGGGACGGATATCTATGTTGTACTGTGAAATGTTAGAGAATGAAGTTATGTTGTTGATGGCACAATC--TATGT
CTTCCGCTTCTATAAATC--------------------GCTAACTGGTCACTTCTAAATAGCTCTATGGATTTCCTATTT
ATTTGTTATCGGTAAAACAGTTACCATTTTCGTTTGTCGCAAGTGTACATTTCACTTCCCTAAATGTTATTGTTGGTGTG
CTTATTGGTTCTTCTTCAGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTCCCTATTTGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTTTTGTC--ATATATGAGCT-GCTGGAAATCCTCGAAACTGTACCTGCCT---
----GATGTGTCCTAGCTTCAGCTTCATCA-GTTTAGTTTTGAAGCACTTAATATGGC-----TG-----CAATACATAA
GTTTTT-GTGTAGTTTGAAGTTCTCACCAAATTGAGAGTTGATATGAAC-TTGTTAGTGCTGGGTGGTCTATAAATCAGT
GATGATTCCCTCGTCATGAGATTATGGTTTGTTCAGCTATTGCCAATGCAGATGCCCTGTTAT----------GTA----
-----CCTTCTTCTGGATGAACTGCTACG-TTTTTCAGTTTCTAGTCTACCTGCAAATTCGCCCGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGCGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCAC-TTGAGACTTGTCTGGTTCATTTT
CATAGGGTAATTCGGTTATCTTC----------TCCTAGTAGTTGTAGAGTTCTGCATCTCCTAGTAG------AGTTCT
GCATACTTA-GAGGACCCCATAACTTTTGGCTCCATGTGTTATGTGGTGCTGCCAAGGATCTGGTCGGTGTTCAGTTTCA
GAATCCTAT
>chr4B_75
GAAGGG--------------------------------------------------------------------------
GACTAATAAATCAGGACGGTAGTAGCATGTTACACATGTTTCGGTTGCTTTT---TT-TATCTACAAGGGACTTCTCATT
TTTCACCGTATGAAAATGATTGTAAATTTAGGAGGGTGACATGTGACTATCACCGTCAGGCCTATAACATAAAGTCTAAC
GTTGCAGTCAATATGATCTCCTGTTCTCTTGTCACCGCCTCCTCCTTCTCCTCTACAAAAAGCTAGGGTATTTGCCTCCC
GCCGCCGTCGTCGTCGCAGGTCCGCCTCCTCTTCGATGGCCTTAGGGCCGGGCCGCAGTGGATCTCGGCAATGGTCGGCG
GGAGGGCTCCGTTGTTAATCGTTTCTTTCAGTTTTGCTAGGGTTTGTGTCCTGCTCAGGAAGACGAGACGGCGGCGGCTC
CCTGAAGATGGAATAAAGGTCTCCCTGTCTAGCCCCCGTTCCGGCGATGCGTCTAGCATCGTTGGTGGGCGTGTGGAGGT
GTGTCTCCGGCGGATCTATCTTTGGTGGATTTGCTCGGATCTCGTCGTTGTTCGTCTATGTTCGTGTGTCTTCGAATTGG
ATTTTTCTGATCTACGTTATTCTTCATCTGCGGCGGTTGCTGTTCTGGTGCGCTGGTCCTACGGGGCCTCAGCACGACGA
CTTCCCGACTGTCTACTACAACAAGTTGTGCGCGACTCCGGCGATGGAGGGGCGAGGACGGCGGCGCGCCTTCGGCTCGC
TTCAGTGCTGGTAGTTGTCGCTAGGTAGTCTACGGATCTGGATGTAATTTCTATTATTTCTGGTATTCGTTGTACTGTCA
TGATTGAAGATGAATAGATCGAAAATTTTCTCGCAAAAAAAAAAGAAAAAAAAAATAACGTTGCAGTCAATATGGATTTT
TGGCTACAAAAGCAGCATTTCCATGGCTTTTATCCGTAACGAGCAGCTACTTATCGAAGTAGAAAT--------------
-------------------------------------------------GCAT---TAGCAGCAACGGGCAAACCCGGTT
ACCCGTAGAGCCAGCC------AGCAACCCCGACCCGGTCGCACCCACACG-------GCCAGGACAGAAACTTGTACTG
CTAGTATACG-AACGATTAACCGTGCGGAACAGCCCACTGAAACAACGGCCACCCTTCCGTCCCCCACGTCCCGCCAGGA
CCCATCCGTCATTGACCTGTCTATCACCTCGCGACGCCCGCATCAACAAATCAAACCAACCAACGAGAATTTATTATACC
AA-GGAATAATAAATTACT-----CGTATTACTTACCGGGCGAGGCGACACGGGAGAAAAAAAAGAAAAAGGAGTAGAAG
CATCGGGCGC-----GTCTCCGCGTCCTGCTGCCATTCCTTCCTTCCTTCCTTCCTCTGCTCT---TGGCCTTCTTCCTC
CTCCCCCAAGGCGAGAATCCGCGGCG---------GATTTCGATCCCGTCTCCAGATTTCC--------TCCACCTCCAG
ACACCCACCGCAATCCGCTCCCCCTCAACGT----------GCAC----------TCCCACTCGCCCCCATCCTTATTAA
TTCCCCTTCCCTTCCGCACTTCTAAACCTCCTCCTCCTCCTCTTCCTCCCCGTCCTCGTCCCCGTCCC------------
GCACCGCCGCCGCATTGCTCGGCCGCGGCGTCGATCTAGACTCT--AGGGCCGTCTGCATTTCT-GTGTTTCC-------
GTTCGAATCGGCTGGGTGCTCGATCCGAGGGGCGGGGGAGAAATGTGGGTGGCGGAGCGGGTGCTGGGGGAGCGCCGGAT
GCGGGAGATCCAGCGCTTCACCCGGAACGCCAAGCTCACCATCGTCTGCCTCATGCTCACCATCCTCGTGCTCCGCGGCA
CCGTCGGGGCGGGCAAGTTCGGCACGCCGCAGCAGGACCTCACCGAGCTGCGCCACCGCTTCATCTCCCACCCGCAGCGC
GCGCTCTCCGAGCACCACGACGCCCGCTCCAAGGCCTCCGACGCCCAAGCCCAAGCCGCCCAGG---CCGCGGGGAAGGC
CGCCGCCCGGGACGACGAGCCGGAGCCGCAGCCCAGGTCGCTCCGGGACCCGCCCTACACGCTCGGCCCCAAGATCTCCG
ACTGGGACGAGCAGCGGGCCGCCTGGAACCGCCGCCACCCGGAGACCCCGCCCTTCCTCAACGACGTCAAGCCGCGGGTC
ATGCTCGTCACGGGGTCCTCACCCAAGCCCTGCGAGAACCCCGTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAA
GATCGACTACTGCCGCATCCACGGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGCTCGCCGGCTTCTGGG
CCAAGCTCCCGCTCCTCCGCGCCCTCCTCCTCGCGCACCCGGAGGTCGAGTTCTTCTGGTGGATGGACTCCGACGCCATG
TTCACCGACATGGCCTTCGAGCTGCCGTGGGAGCGCTACGGCCCCTACAACTTCATCCTGCACGGCTGGGACGAGATGGT
CTACGACGACAAGAACTGGATTGGCCTCAACACCGGCAGCTTCTTGCTGCGTAACTGCCAATGGTCGCTTGATTACCTCG
ATACCTGGGCTCCCATGGGGCCGAAGGGCCCTGTCCGTATTGAGGCTGGAAAGGTGCTCACCAAGTACCTCAAGGACCGG
CCGGTCTTTGAAGCCGACGATCAGTCCGCCATGGTGTATATCCTCGCTACCCAGCGTGAGAAATGGGGTAACAAGGTTTA
TCTCGAGAATGGCTACTATCTCCATGGCTATTGGGGGATCTTGGTGGACAGGTACGAGGAGATGCTTGAGAATTACCAGC
CAGGGCTCGGCGATCATCGGTGGCCACTGGTCACTCACTTTGTCGGGTGCAAGCCATGCTCCAAGTTTGGGGATTACCCT
GTTGAGCGGTGCCTCAAGCAGATGGACCGTGCCTTCAATTTCGGGGATAACCAGGTGTTGCACATGTATGGTTTTGAGCA
CAAGTCTCTTGCGAGCAGGAGGATCAAGAGGATCAGGAATGAGACCAGTGACCCTCTTGATATGAAGGATGATTACGGGT
TGCTCCACCCAGCGTTCAAGGCCGTCAAGACTAC----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TACATGATAACTATAGTACACTACTTCCACGTTTATTTTGTTC
GTTCGTTCTAGATTCTCTTGGATCAAAATCCTATAATTCTTCTTTTTGTAGACTCAGGGTAACAAGGAAATTTGGTTTTG
GTATCACGGGACGGATATCTATGTTGTACTGTGAAATGTTAGAGAATGAAGTTATGTTGTTGATGGCACAATC--TATGT
CTTCTGCTTCTAGAAATGGAGTTAGAGATGGGTACTCAGCTAACTGCTCACTTCTGAATAGCTCTATGGGTTTCCTAT--
--------------------TTAGCATTTTCATTTGTCGCAAGTGTGCATTTCACTTCCCTAAAAGATATTTGTCATGTG
CTTATTGGTTCTTC---AGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTTCCTATTTGCATTGCCATTGGTG
GTAGTTGGGTAGGAGGATATCCGG-TTTTTTGTC--ATATATGAGTTGGCTGGAATTTCTCGAAACTGTACCTGCCT---
----GATGTGTCCTAGCTTCAGCTTCATCA-ATTTAGTTTTGAAGCACTTAGTATGGCTGGTATG-----CAATACATCA
GTTTTT-GCGTACTTTGAAGTTCTAAACCAATTGAGAGTTGATGTGAGC-T-GTCAGTTCTAACCAAATTTAG-------
--TCATTTCTTTGTCATGAGA-TATGGTATGTTCAGCTATTGCCAATGCAAATGCCCTGTTTATGTAAAGCGCGTC----
-----TCTTCTTCTTGTTGTACTGTTACG-TTTTTCAGTTTCTAGTCCATCAGCAGATTCGCCA-AGGGGATTGTCAGTT
TTTGACTATGCTTTGGACCTAGTGTAGCAAGTTTGTCTTGACTATGCTACAATCAC-TCAAGACTTGTCTGGTTCATTTT
CATAGGGTAATTCGGTTATCTTC----------TCCTGGTAGTACCAGAGTTCTGCATCTCTTAGCAG------AGTTCT
GCATACTTG-GAGGACCCCGTAACTTTTGGCTCCATGTGTTGTGTGGTGCCGCCATGGATCTGGTCGGTGTTCAGTTTCA
GTATCCTAT
>chr4A_81
--------------------------------------------------------------------------------
GACTAATAAATCAGGACAGTGGTAGCATGTTACCCATGTTTCGGTTACTCTTTTTA-AAATCTCCAACGGACTTATCATT
TTTCACCGTATGAAAAGGATTGTAAATTTAGGAGGGTGACATGTGAGTATCATCGTTAGACCTGTAACATCAAGTGTAAA
GTTGCAATCGGTATGGA---------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ATTTT
TAGCTACAAAAGCAACATTTCCATCGCTTTTATCCGTAACGAGCAGGTACTTATCGAAGTAGAAAT--------------
-------------------------------------------------GCAT---TAGCAGCAACGGGCAAACCCGGTT
ACCCGCGGAGCCAGCCAGCCAGAGCAACCCAGACCCGGTCGCACCCACACCGCCAGGCGCCAGGACAGAAATTTGTACTG
CTAGCATACG-AAC------------------------------AACGGCCACCCTTCCTTCCCCCACGTCCCGCCAGGA
CCCACGCGTCATTGACCT----ATCACCTCGCGACGCCCG---CATCAAATCAAACCAACCAACGAGGATTTATTATACC
AAAGGGATAATAAATTACT-----CGTATTACTTACCGGGCGAGGCGACACGGGGGAAGGGGAAAGG--AGGAGTAGAAG
CATCGGGTGCATCTCGTCTCCGCGTCCCGCTGCCATTCCTTCCTTCCTTCCTTCCTTCCTCTGCTCTGGCCTTCTTCCTC
CTTCCCCAAGGCGAGAATCCGCGGCGGATTGACCCGATTTCGATCCCGTCTCCAGATTTCCCCTCCACCTCCACCTCCAG
ACACCCACCGCAATCCGCTCCCCCTCAACGTGCGCGCTCGCGCGC----------TCCCACTCGCCCCCATCCTTATTAA
TTCCCCTTCCCTTCCCCACCTCTAAACCTCCTCCTCC-CCTCTTCCTCCCCGGCCTCGGCCTCGTCCCCGTCCCCGTCCC
GCAACGCCGCCGCATTGCTCGGCCGCGGCGTCGATCTAGACTCTCTAGAGGCGTCTGCATTTCT-GTGTCTTCTTGTTCG
GTTCGATTTGGCTTGGTGCTCGATCCGAGGGGCGGGGGAGAAATGTGGGTGGCGGAGCGGGTGCTGGGGGAGCGCCGGAT
GCGGGAGATCCAGCGCTTCACCCGGAACGCCAAGCTCACCGTCGTCTGCCTCATGCTCACCATCCTCGTGCTCCGCGGCA
CCGTCGGGGCGGGCAAGTTCGGCACGCCGCAGCAGGACCTCACCGAGCTGCGCCACCGCTTCATCTCCCACCCGCAGCGC
GCGCTCTCCGAGCACCACGACGCCCGCTCCAAGGCCTCCGACGCCCAGGCCCAGGCCGCCCAGGCCTCCGCGGGGAAGGC
CGCCGCCCGGGACGACGAGCCGGAGCCGCAGCCCAGGTCGCTCCGGGACCCGCCCTACACGCTCGGCCCCAAGATCTCCG
ACTGGGACGAGCAGCGGGCCGCATGGAACCGCCGCCACCCGGAGACCCCGCCCTTCCTCAACGACGTCAAGCCGCGGGTC
ATGCTCGTCACGGGGTCCTCGCCCAAGCCCTGCGAGAACCCCGTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAA
GATCGACTACTGCCGCATCCACGGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGCTCGCCGGCTTCTGGG
CCAAGCTCCCGCTCCTCCGCGCGCTCCTCCTCGCTCACCCGGAGGTCGAGTTCTTCTGGTGGATGGACTCCGACGCCATG
TTCACCGACATGGCCTTCGAGCTGCCGTGGGAGCGCTACGGCCCCTACAACTTCATCCTGCACGGCTGGGACGAGATGGT
CTACGACGACAAGAACTGGATTGGTCTCAACACCGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTCGATTACCTCG
ACACCTGGGCGCCCATGGGGCCGAAGGGCCCTGTTCGTATTGAGGCTGGGAAGGTGCTCACCAAGTACCTCAAGGACCGA
CCGGTCTTTGAAGCCGACGATCAGTCCGCCATGGTGTATATCCTCGCTACCCAGCGTGAGAAATGGGGTAACAAGGTGTA
TCTCGAGAATGGCTACTACCTCCATGGCTATTGGGGCATCTTGGTGGACAGGTACGAGGAGATGCTTGAGAATTACCAGC
CGGGGCTCGGCGATCATCGGTGGCCACTGGTCACTCACTTTGTCGGGTGCAAGCCATGCTCCAAGTTTGGGGATTACCCT
GTTGAGCGGTGCCTCAAGCAGATGGACCGGGCCTTCAATTTCGGGGATAACCAGGTGTTGCACATGTATGGGTTTGAGCA
CAAGTCTCTTGCGAGCAGGAGGATCAAGAGGATCAGGAATGAGACCAGTGACCCTCTTGATATGAAGGATGATTACGGGT
TGCTCCACCCAGCGTTCAAGGCCCTCAAGACTTC----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TACATGATAACTATAGTACACTACTTCCACGTTTATTTTGTTC
GTTCGTTCTAGATTCTCTTGGATCAAAATCCTATAATTCTTCTTTTTGTAGACTCAGGGTAACAAGGAAATCTGGTTTTG
GTATCAGGGGACGGATATCTATGTTGTACTGTGAAATGTTAGAGAATGAAGTTATGTTGTTGATGGCACAATC--TATGT
TTTCCGCTTCTATAAATC--------------------GCTAACTGGTCACTTCTAAATAGCTCTATGGATTTCCTATTT
ATTTGTT------------GTTACCATTTTCATTTGTCGCAAGTGTACATTTCACTTACCTAAATGTTATTGTTCGTGTG
CTTATTGGTTCTTCTTCAGTAGGATATGGTCGTCCCTGTGAGCCAATTATTTTGCTTCCCTATTTGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTTTTGTC--ATATATGAGCT-GCTGGAAATCCTCGAAACTGTACCTGCCT---
----GATGTGTCCTAGCTTCAGCTTCATCA-GTTTAGTTTTGAAGCACTTAATATGGC-----TGGTATGCAATACATCA
GTTTTC-GTGTAGTTTGCAGTTCTGACCAAATTGAGAGTTGATATGAAC-TTGTTAGTGCTGGGTGGTCTATATATCAGT
GATGATTTCCTCGTCATGAGATTATGGTTTGTTTAGCTATTGCCAATGCAGATGCCCTGTTAT----------GTA----
--------TCTTCTGGATGAACTGCTACCTTTTTTCAGTTTCTAGTCTACCTGTGAATTCGCCTGAGCGGATTTTCAG-T
TTTGA-----------ACGTAGCGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCACTTTGAGACTTGTCTGGTTCATTTT
CATAGGGTAATTCGGTTATCTTC----------TCCTAGTAGTTGTAGAGTTCTGCATCTCCTAGTAGTTGTAGAGTTCT
GCATACTTAAGAGGACCCCATAACTTTTGGCTCCATGTGTTGTGTGGTGCTGCCATGGATCTGGTCGGTGTTCAGTTTCA
GAATCCTAT
>chr1B_81
--------------------------------------------------------------------------------
GACTAATAAACCAGGACGGTAGTAGCATGTTACACATGTTTCGGTTACTTTTTTGTT-AATCTCCAACGGACTTTTCATT
TTTCACCGTATGAAAAGGATAGTAAATTTAGGAGGGTGACATGTGACTATCATCGTCAGGCCTGTAACATCAAGTCTAAC
GTTGCAGTCGATATAGA---------------------------------------------------------------
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---------------------------------------------------------------------------ATTTT
CGGCTACAAAAGCAACATTTCCATTGCTTTTATCCGTAACGAGGAGGTACTTATCGAAGTAGAAATGCGTTACCCCGCAA
AAAAGAAGTAGAAATGCGTTAGCAGTGTGTTAAAAAAATAAAAATAAAAGCAT---TAGCAGCAACGGGCAAACCCGGTT
ACCCGTAGAGCCAGCC------AGCAACCCCGACCCGGTTGCACCCACACCGCCAGG-------ACAGAAACTTGTACTA
CTAGCATACG-AAC------------------------------AACGGCCACCCTTCCTTCCCCCACGTCCCTCCAGGA
CCCATCCGTCATTGACCT----A----------------G---CATCAAATCAAACCAACAAACGTGAATTTATTATAGC
AA-GGAATAATAAATTACTCGTACTGTATTACTTACCGGGCGAGGCGACACGGGGGAAGGGAAAAGG--AGGAGTAGAAG
CATCGGGTGC-----ATCTCCGCGTCCCGCTGCCATTCCTTCCTTCCTTCCT----CTGCTCT---TGGCCTTCTTCCTC
CTTCCCCAAGGCGAGAATCCGCGCCGGATTGACCCGATTTCGATCCCGTTTCCAGATTTCCCCT------CCACCTCCAG
ACACCCACCGCAATCCGCCCCCCCTCAACGTGCGCGCTCGCGCAC----------TCCCACTCGCCCCCATCCTTATTAA
TTCCCCTTCCCTTCCGCACTTCTAAACCTCCTCTTCCT---------------CCCCGGCCTCGTCCCCGTCCCCGTCCC
GCACCGCCGCCGCATTGCTCGGCCGCGGCGTCGATCTAGACTCC---GAGGCGCCTGCATTTTGCGTCTTCTT-------
GTTCGATTCGGCTTGGTGTTCGATCCGACAAGA-------AAATGTGGGTGGCGGAGCGGGTGCTGGGGGAGCGCCGGAT
GCGGGAGATCCAGCGCTTCACCCGGAACGCCAAGCTCACCGTCGTCTGCCTCATGCTCACCATCCTCGTGCTCCGCGGCA
CCGTCGGGGCGGGCAAGTTCGGCACGCCGCAGCAGGACCTCACCGAGCTGCGCCACCGCTTCATCTCCCACCCGCAGCGC
GCGCTCTCCGAGCACCACGACGCCCGCTCCAAGGCCTCCGACGCCCAGGCCCAAGCCACCCAGG---CCGCGGGGAAGGC
CGCCGCCCGCGACGACGAGCCGGAGCCGCAGCCCAGGTCGCTCCGGGACCCGCCCTACACGCTCGGCCCCAAGATCTCCG
ACTGGGACGAGCAGCGGGCCGCCTGGAACCGCCGCCATCCGGAGACCCCGCCCTTCCTCAACGACGTCAAGCCGCGGGTC
ATGCTCGTCACGGGGTCCTCCCCCAAGCCCTGCGAGAACCCCGTCGGCGACCACTACCTCCTCAAGTCCATCAAGAACAA
GATCGACTACTGCCGCATCCACGGCCTCGAGATCTTCTACAACATGGCGCTGCTCGACGCCGAGCTCGCCGGCTTCTGGG
CCAAGCTCCCGCTCCTCCGCGCGCTCCTCCTCGCGCACCCGGAGGTCGAGTTCTTCTGGTGGATGGACTCCGACGCCATG
TTCACGGACATGGCCTTCGAGCTGCCGTGGGAGCGCTACGGCCCCTACAACTTCATCCTGCACGGCTGGGACGAGATGGT
CTACGACGACAAGAACTGGATTGGCCTCAACACCGGCAGCTTCTTGCTGCGCAACTGCCAATGGTCGCTCGATTACCTCG
ACACCTGGGCGCCCATGGGGCCCAAGGGCCCTGTTCGTATTGAGGCTGGTAAGGTGCTCACCAAGTACCTCAAGGACCGG
CCGGTCTTTGAAGCCGACGATCAGTCGGCCATGGTGTATATCCTCGCTACCCAGCGTGAGAAGTGGGGTAACAAGGTGTA
TCTCGAGAATGGCTACTACCTCCATGGCTATTGGGGGATCTTGGTGGACAGGTACGAGGAGATGCTTGAGAATTACCAGC
CAGGGCTCGGCGATCATCGGTGGCCACTGGTCACTCACTTTGTCGGGTGCAAGCCATGCTCCAAGTTTGGGGATTACCCT
GTCGAGCGATGCCTCAAGCAGATGGACCGGGCCTTCAATTTCGGGGATAACCAGGTCTTGCACATGTATGGGTTTGAGCA
CAAGTCTCTTGCGAGCAGGAGGATCAAGAGGGTCAGGAATGAGACCAGTGACCCTCTTGATATGAAGGACGATTACGGGT
TGCTCCACCCAGCGTTCAAGGCCCTCAAGACTACTACTCCCTCCGTGTTCCTAAATATAAGTCTTTGTAAAAATTTTACT
ATGAATTAGATACGGATGTATATAGATGCATTTTAAGTGTGAATTCATTCATTTTGCTTCGTATGTAGTCCATCTAGTGG
AATTCCCACAAAGACTTACATTTAGGAACGGAGGGAGTACATGATAACTATAGTACACTACTTCCACGTTTATTTTGTTC
GTTCGTTCTAGATTCTCCTGGATCAAAATCCTATAATTCTTCTTTTTGTAGACTCGGGGTAACAAGGAAATTTGGTTTTG
GTATCAGGGGACGGATATCTATGTTGTACTGTGAAATGTTAGAGAATGAAGTTATGTTGTTGATGGCACAAAATATATGT
CTTCTGCTTCTAGAAATC--------------------G-----------------------------------------
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>chr1B_2611
--------------------------------------------------------------------------------
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ATTTGTTATCGGTAAAACAGCTAGGATTTTCATTTGTCGCAAGTGTACACTTCACTTCCCTAAAAGATATTCGTCATGTG
CTTATTGGTTCTTCTTCAGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTCCCTATTTGCATTGCCATTGGTG
GTAGTTGGGTAGGACGATATCTTG-TTTTTTGTC--ATATATGAGCA-GCTGGAAATCCTCGAAACTGTACCTGCCTGAT
GTGTGATGTGTCCTAGCTTCAGATTCATCA-ATTTAGTTTTGAAGCACTTAATATGGC-----TGGTATGCAATACATCA
GTTTTT-GTGTACTTTGAAGTTCTAAACCAATTGAGAGTTGATGTGAAC-T-GTTAGTTCTAACCAAATTTAG-------
--TCATTTCTTTGTCATGAGA-TATGGTATGTTCAGCTATTGCCAATGCAAATGCCCTGTTAT----------GTAAAGC
GCGTCTCTTCTTCTGGTTGAACTGTTACG-TTTTTCAGTTTCTAGTCCATCAGCAGATTCGCCA-AGGGGTTTGTCAG-T
TTTGACTGTGCTTTGGACGTAGTGTAGCAGGTTTGTCTTGACTATGCTACAAGCAC-TCAAGACTTGTCTGGTTCATTTT
CATAGGGTAATTCGGTTATCTTC----------TCCTAGTAGTTGTAGAGTTCTGCATCTCCTAGTAG------AGTTCT
GCATACTTG-GAGGCCCCCGTAACTTTTGGCTCCATGTGTTGTGTGGTGCTGCCATGGATCTGGTCGGTGTTCAGTTTCA
GAATCCTAT
>chr1A_2677
TTATTG--------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTCGTGTG
CTTATTGGTTCTTCTTCGGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTC-CTTTTTGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTTCTGTCATATATATGAGCT-GCTGGAAATCCTCGAAACTGTACCTGCCTGAT
A-------TGTCCTAGCTTCAGCTTCATCG-GTTTAGTTTTGAAGCAC----------------------------ATCA
GTTTTT-GTATACTTTGATGTTCTGACCAAATTGACAGTTGATGTGAACATTGTTAGTGTTGGGTGGTCTATATATTAGT
GATGATTTCCTCGTCATGAGATTATGGTGCGTTCGGCTCTTGCCAATGCAGATGCCCTGCTAT----------GTA----
-----TCTTCTTCTGGATGAACTGCTACG-TTTTTCAGTTTCTAATCTATCTGCAAATTCGCCCGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGTGTAGCAGGTTTGTCCTTGAGTGAAGCAAAAGAC-TTGA--CTTGTCTGGTTCATTTT
TGTAGGGTAA----------TTC----------TCCTAGTACTAGTAGAGTTCTACATCTCCTAGTAG------AG----
-------------GAGCCTGTAACTTTTGGCCCCATGTGTAGTTTCGTGCTGCCATGGATCTTGTCCGTGTTCAGTTTCA
GTATCCTAT
>chr5A_2677
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------------------------------------------------------------------TTATTGTTCGTGTG
CTTATTGGTTCTTCTTCAGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTA-CTTTTTGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTT-TGTCATATATATGAGCT-GCTGGAAATCCTCGAAACTATACCTGCCTGAT
A-------TGTCCTAGCTTCAGCTTCATCA-GTTTTGTTTTGAAGCAC----------------------------ATCA
GTTTTT-GTATACTTTGAGGTTCTGACCAAATTGAGAGTTGATGTGAACATTGTTAGTGATGGGTGGTCTATATATTAGT
GATGATTTCCTTGTCATGAGATTATGGTGCGTTCAGCTCTTGCCAATGCAGATGCCCTGCTAT----------GTA----
-----TCTTCTTCTGGATGAACTGCTACG-TTTTTCAGTTTCTAATCTATCTGCAAATTTGCCTGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGTGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCAC-TTGA--CTTGTCTAGTTCATTTT
CGTAGGGTAA----------TTC----------TCCTAGTACTAGTAGAGTTCTGCATCTCCTAGCAG------AG----
-------------GAGCCTGTAACTTTTGGCCCCATGTGTAGTGTCGTGCTGCCATGGATCTTGTCGGTGTTCAGTTTCA
GTATCCTAT
>chr3A_2677
TTATTG--------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTCGTGTG
CTTATTGGTTCTTCTTTGGTAGGATATGGTCGTCCCTCTGAGCCAAATATTTTGCTAC-CTTTTTGCATTGCTATTGGTG
GTAGTCGGGTAGGAGGATATCTTGTTTTT-TGTCATATATATGAGCT-GCTGGAAATCCTCGAAACTATACCTGCCTGAT
A-------TGTCCTAGCTTCAGCTTCATCATGTTTAGTTTTGAAGCAC----------------------------ATCA
GTTTTTTGTATACTTTGATGTTCTGACCAAATTGAGAGTTGATGTGAACATTGTTAGTGCTAGGTGGTCTATATATTAGT
GATGATTTCCTCGTCATGAGATTATGGTGGGTTCAGCTCTTGCCAATGCAGATGCCCTGCTAT----------GTA----
-----TCTTCTTCTGGATGAACTGCTACG-TTTTTTAGTTTCTAATCTATCTGCAAATTCGCCTGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGTGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCAC-TTGA--CTTGTCTGGTTCATTTT
TGTAGGGTAA----------TTC----------TCCTAGTACTAGTAGAGTTCTGCATCTCCTAGTAG------AG----
-------------GAGCCTGTAACTTTTGGCCCCATGTGTAGTGTCGTGCTGCCATGGATCTTGTCGGTGTTCAGTTTCA
GTATCCTAT
>chr7A_2677
TTATTG--------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTTGTGTG
CTTATTGGTTCTTCTTCAGTAGGATAT-GTCGTCCCTCTGAGCCAATTATTTTGCTTA-CTTTTAGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTT-TGTCATATATATGAGCT-GCTGGAAATCCTCGAAACTATACCTGCCTGAT
A-------TGTCCTAGCTTCAGCTTCATCA-GTTTAGTTTTGAAGCAC----------------------------ATCA
GTTTTT-GTGTACTTTGAGGTTCTGACCAACTTGAGAGTTGATGTGAACATTGTTAGTGCTGGGTGGTCTATATATTAGT
GATGATTTCCTCGTCATGAGATTATGGTGCGTTCAGCTCTTGCCAATGCAGATGCCCTGCTAT----------GTA----
-----TCTTCTTCTGGATGAACTGCTATG-TTTTTCAGTTTCTAATCTATCTGCAAATTCGCCCGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACATAGTGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCAC-TTGA---TTGTCTAGTTCATTTT
TGTAGGGTAA----------TTC----------TCCTAGTACTAATAGAGTTCTGCATCTCCTAGTAG------AG----
-------------GAGCCTGTAACTTTTGGCCCCATGTGTAGTGTCGTCCTGCCATGGATCTTGTCGGTGTTCAGTTTCA
GTATCCTAT
>chr6A_2677
TTATTG--------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTCATGTG
CTTATTGGTTCTTCTTCAGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTA-CTTTTTGCATTGCTATTGGTG
GTAGTTGGGTAGGAGGATAT----------TGTCATATATATGAGCT-GCTGGAAATCCTCGAAACTATACCTACCTGAT
A-------TGTCCTAGCTTCAGCTTCATCA-GTTTAGTTTTGAAGCAC----------------------------ATCA
GTTTTTTGTGTACTTTGATGTTCTGACCAACTTGAGAGTTGATGTGAACATTGTTAGTGCTGGGTGGTCTATATATTAGT
GATGATTTCCTCGTCATGAGATTATGGTGCGTTCAGCTCTTGCCAATGTAGATGCAGTGCTAT----------GTA----
-----TCTTCTTTTGGATGAACTACTACG-TTTTTCAGTTTCTAATCTTTCTGCAAATTCGCCCGAGCGGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGTGTAGCAGGTTTGTCCTTGAGTGAAGCAAATCAC-TTGA--CTTGTCTAGTTCATTTT
CGTAGGGTAA----------TTC----------TCCTAGTACTAGTAGAGTTCTGCATCTCCTAGTAG------AG----
-------------GAGCCTGTAACTTTTGGCCCCATGTGTAGTGTCGTCCGGCCATGGATCTTGTCGGTGTTCAGTTTCA
GTATCCTAT
>chr1A_2687
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----------------------------------------------------------------------------TGTG
CTTATTGGTTCTTCTTAAGTAGGATATGGTCGTCCCTCTGAGCCAATTATTTTGCTTCCCTATTTGCATTGCCATTGGTG
GTAGTTGGGTAGGAGGATATCTTG-TTTTTTGTC--ATATATGAGCT-GCTGGAAATCCTCGAAACTATACCTGCCTGAT
G-------TGTCCTAGCTTCAGCTTCATCA-GTTTAGTTTTGAAGCACTTAATATAGC-----TG-----CAATACATCA
G--TTTTGTGTAGTTTGAAGTTCTGACCAAAATGAGAGTTGATATGAAC-TTGTTAGTGCTGGGTGCTCTATATATTAGT
GATGATTTCATCGTCGTGACATTATGATTTGTTCAGCTATTGCCAATGCAGATGCCCTGTTAT----------GTA----
-----CCTTCTTCTGGATGAACTGCTACG-TTTTTCAGTTTCTAGTCTATCTGCAAATTCGCCCGAGCAGATTGTCAG-T
TTTGACTATGCTTTGGACGTAGCGTAGCAGGTTTATCCTTGAGTGAAGCAAATCAC-TTGAGACTTGTCTGGTTCATTTT
CATAGGGTAA----------TTCGGTTATCTTCTTCTAGTAGTTGTAGAGTTCTGCATACT----TAG------AG----
-------------GACCCCGTAACTTTTGGCTCCACGTGTTGTGTGGTGCTGGCATGGATCTGGTCGGTGTTCAGTTTCA
GAATCCTAT
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------S--------S-----S--------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
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------SS-----S------------------------------------------------------------------
-----------------------------------------------------SSS------------------------
--------------S--------------------------------S---SSS-S-SS-S-SS-SSSSSSSSSSS-SSS
SSSS-SSSS-S--------------------------------------S----S-------------------------
-----------------------------------------------------------------S--------------
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---------------------------------------------SSSSSSSSSS-------------------------
--------------------------------------------------------------------------SSS---
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-------------S--S---------------------------------------------------------------
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------------------------------------------------------------S-------------------
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S-------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
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-----------------S--------------------------------------------------------------
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-------------------------------S------------------------------------------S-----
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------------------------------------------------------------------------------S-
------------------------S------------------------------------------------S------
-------S------------------------------------------------------------------------
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-----------------------------------------S-------------S------------------------
---------
>forward_1179
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---------------------------------------CGCACCCATACGAGTACGAA---------------------
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>reverse_2818
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-----------------TGATCAGTCGGCCATGGTG--------------------------------------------
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>forward_1202
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--------------------------------------------------------------TTAACCCCTGACCCATCC
GA------------------------------------------------------------------------------
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>reverse_3712
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-------------------------------GTTTGTCGCAAGTGTACATTTCAC-------------------------
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---------
