>input_sequence_53693
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----------------------------------------CCGGAAATCTCAAAAGCCGACCGCGCCGCGCTCGGATCCA
TCGCAGCCGCAGCCTCCGCGAGAACCATC-------CAGATCGATCG------AGCCATTGCCATGGACGTCCTGAAGCG
CGAGCTGCAGCGCATGCGCCAGCAGCTGGACGCCGACTTCGGCGGCCGCAAGGTGCTCCGCCGCGCCGAGATCGAGGCGC
GCAAGGTCCAGCGCCTCCGCGTCGCCGAGCAGGAGCGCCTCATCCAGAAGAAGAAGAAGGAGGAGGAGCTCCGTTCCCAC
CCCGCCCCCGCGTCGTCTTCCTCCTCCTCGATGCCCGCGTTGCCTCCAGCCGCCGTGGCCGACGCGGCGAAGGCATGCGA
CGACCGCGCGGACGGTTCGAGGGAGTCGTCGTCGCTCCCGAGGGAGGAGGTGATCCGGCGCCTGCGCCTGCTGCGCCAGC
CGGCCACGCTCTTCGGCGAGGACGACGCCGCGCGCCTCCGCCGCCTCCACGACGCGCTCGAGGACCCCGCCGCGGTCGCG
GGCGTCGACGCCGCCGAGATCGGGGAGGGGCAGACCAACGACTTCCTCCGCGACATCCAGGCCCCGCGCGCCAAGGCCTT
GGCTGTGGCGTCCAAGCCCAAGCCCGGCGTTGCCGAGAGCAGCCACGGCGAGAGC---------GAGGAGGAGGCGCCGT
TCGACGAGCTCTGCGACGAGGACAAGATCGTGGCCTTCTTCAAGCGGCTGCTGAGCGAATGGAACCAGGAGCTGGACGAG
ACGCCCGAGGCGGAGCGGCGCACGGCCAGGGGCAAGGCCGCGGTGGCCACGTGCAAGCAGTGCGCGCGCTACCTGGAGCC
GCTCTTCAGGCTGTGCAGGAAGAAGGCCCTCCCCGGCGACGTCCGGCGCGCGCTGCTGGACGTGGTGCGGTGCTGCGCGC
GGCGGGACTACCTGGCGGCCACGGACAGCTACATCAAGCTGGCGATCGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCACGCCAACGGCGTCGCCCACGTGATGAACGACGAGACGACGAG
GAAGTACC------TGCAGTCGGTGAAGCGGCTCATGACCTTCTGCCAGCGGAGGTACCCCACGGACCCGTCCAGGTCGG
TCGAGTTCAACAGCCTCGCCAACGGCAGCGACCTGCACTCCCTCCTCCTCCTCGCCGAGAAGGGCGCCGAGAA---GCAC
CCGGAGGAGACGCTCCGGCTGGTGGCTGCCTCCTGAC----GACGAATCACCATCGCCAACCTCTGCATTTTAGAAGCTC
AA----AACTTTACTGCCATTTGAC---------------GAAAATTGTTCTCTTGCTTTCTTGTTGGCTGATAAAGATC
TGGCTGTGAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr4D_1_TraesCS4D01G035800
AATGCGAGCACCGCTACTTGAACCCTAATGAGTTGGGAATACCATCGTTCACCTAACCATCCAACCACATGTTGGTTCAC
AGGTCTTGGCGCAAAGCTGCCTTACGTATCGCTTTACATTTTTTGTAAGCCGGTACTAGGCGCCGGTCTTGCGTGTCCGT
AGTGCATTGCGTTCAACGATCTTACTTTCTCGTCTATTGGCGTGGGCGTCTCATATGGCGTGAGGTTAGTTAAGTTTGTA
CAGGCCTAGTTCGTTGCGACATTTTCTTTGGATGAGGAAAAGTAAAAATGTAAAATATGCAGCTAGTGTCAACGAGTTCA
AAGAGATTTTATGCAATTCCTTTTGTATTAGATATCTTGTTTTATACGTGTATATGGTTCAATTTTTTCGATCTAATGCA
ATTTATTTATTTAACAATTAAGATCGGCCTAAATACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCACCACG
AATTACATACGGATGTATATAGACACATTCTAAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCTATATTGAAGTCT
CTAAAAAGACTTACATTTAGGAACGGAGGAAGTAATACCGTGTGTATCATTCTTTCGCGAAACTTCACATGTGAGTAGAA
TGATCGGCCAGATTTGATACCCCAAAATTTAAGTTTTTTTTTTTTTTTTTTTTGCTATTCATTCACATTGGCGCCAATGG
AACTTTTTCAACCATGTTATGTATTTTCGCTATAGCACTTCTGTCGCTAGCCCCCCTGGGCCTCGCGTCACCTCGCCGGG
CTGCTGCTCGCTGGGCCTCGCGCCTTGTGCTTTCTGGGCCTGTTGTAGCGGGCCGAGAGTTACGTCGGCCTTCCGCGTCG
TAGGTTCAAAGAGGCTCGAGAAGGTTCGCGCGGGCTCGTTCGCTCCTCCGATTCCTTCTCCGGCACCACCACCACCGATC
CAGAACGCGAGCTCTATCACGAACCTTCCAGACCCCGCTCCCGGAAATCTCAAAAGCCGACCGCGCCGCGCTCGGATCCA
TCGCAGCCGCAGCCTCCGCGAGAACCATC-------CAGATCGATCG------AGCCATTGCCATGGACGTCCTGAAGCG
CGAGCTGCAGCGCATGCGCCAGCAGCTGGACGCCGACTTCGGCGGCCGCAAGGTGCTCCGCCGCGCCGAGATCGAGGCGC
GCAAGGTCCAGCGCCTCCGCGTCGCCGAGCAGGAGCGCCTCATCCAGAAGAAGAAGAAGGAGGAGGAGCTCCGTTCCCAC
CCCGCCCCCGCGTCGTCTTCCTCCTCCTCGATGCCCGCGTTGCCTCCAGCCGCCGTGGCCGACGCGGCGAAGGCATGCGA
CGACCGCGCGGACGGTTCGAGGGAGTCGTCGTCGCTCCCGAGGGAGGAGGTGATCCGGCGCCTGCGCCTGCTGCGCCAGC
CGGCCACGCTCTTCGGCGAGGACGACGCCGCGCGCCTCCGCCGCCTCCACGACGCGCTCGAGGACCCCGCCGCGGTCGCG
GGCGTCGACGCCGCCGAGATCGGGGAGGGGCAGACCAACGACTTCCTCCGCGACATCCAGGCCCCGCGCGCCAAGGCCTT
GGCTGTGGCGTCCAAGCCCAAGCCCGGCGTTGCCGAGAGCAGCCACGGCGAGAGC---------GAGGAGGAGGCGCCGT
TCGACGAGCTCTGCGACGAGGACAAGATCGTGGCCTTCTTCAAGCGGCTGCTGAGCGAATGGAACCAGGAGCTGGACGAG
ACGCCCGAGGCGGAGCGGCGCACGGCCAGGGGCAAGGCCGCGGTGGCCACGTGCAAGCAGTGCGCGCGCTACCTGGAGCC
GCTCTTCAGGCTGTGCAGGAAGAAGGCCCTCCCCGGCGACGTCCGGCGCGCGCTGCTGGACGTGGTGCGGTGCTGCGCGC
GGCGGGACTACCTGGCGGCCACGGACAGCTACATCAAGCTGGCGATCGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCACGCCAACGGCGTCGCCCACGTGATGAACGACGAGACGACGAG
GAAGTACC------TGCAGTCGGTGAAGCGGCTCATGACCTTCTGCCAGCGGAGGTACCCCACGGACCCGTCCAGGTCGG
TCGAGTTCAACAGCCTCGCCAACGGCAGCGACCTGCACTCCCTCCTCCTCCTCGCCGAGAAGGGCGCCGAGAA---GCAC
CCGGAGGAGACGCTCCGGCTGGTGGCTGCCTCCTGAC----GACGAATCACCATCGCCAACCTCTGCATTTTAGAAGCTC
AA----AACTTTACTGCCATTTGAC---------------GAAAATTGTTCTCTTGCTTTCTTGTTGGCTGATAAAGATC
TGGCTGTGATGATCAAGGCCTAAAGCCATCCTGATGACCGTATGTATGTTCATTATTTTGTTCTAGACGTGATAAAAATG
TTGGGA-----GTGTGATGATGATTACTAGTG---------TGCTGAACGTAGCAGCACTCTGTTCCTTGTTCTGAAAAC
CACATGGACTGGACTGTCCCTCAAAGAAACAAAATCACAGGTACTGTGAAACTGCAAATTCGTTTTAAGTTCGTCCGAAA
ATTCATTTTAAGATGTGAAATTGAATAAATTTGACCAAGTTCTAACTGCATGTAAATTTTCGTCGAGAATAGTCATGTGG
CAATCTTTGCAAAGAAAGGCAAAAAAGAGTGCTCTTAAAAGGTT------------T-TTTAGCACCA-TTTTTTTTCTT
TTTTGTCCATACAATCACACATCTTTTCTTTGCTATTTTTTCTTAAAAATGAGCTAATTGTAAAAAAAAAGTTTTTTTTT
TGCTTCC-----TTTTTTTTCTGAATTACGATTCATAGGGGG-CTCACACTTGAATTTCAGCATCTCGGTGAGCTGTTTT
TGAAAAACAT-GAGGAAAATGCGTACATGAAGGATCAGCTTTGGGTCACTATCTTAACAAACGCTTCGAAGCTTCCACCT
TTTATTTACCCAAATAATAACACCCACACGTATGATACGAAACAACATGGTCCAAATGCCTCTATTATCATTCATTTTGC
CACGTCAAAAAAGATGATATTAGCGGAAATCTTTTTGGTTTTCGGCTTAAAAATGTTTTATCTTTTAATTAAAAAATTCA
ATTAAAAATTCGTTTTCACCATTAAATCCGTCCGTCTTGACGAGATCCTCAAAACTAAATCCCATGTTGATATGTTTTGA
CGAAAAAGAAATTTGGTCAAAAGTTGTCATGATGTTTACACTGTAGTTACCATTGTGTTTACACTAAAGTTGCCATGCGG
CAATTTTACTTTATAGATCATGACAATTTTAGTATTTTGACCATGGCAATTTCAGTACTTTGACCATGAAAATTATTTTT
TATAT
>chr4A_590
AAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------TAATACTGTGTGCGTCATTCTTTCACGAAACTTCACATATGAGTAGAA
CGATCGACCAGATTTAATA-CCCAAAATTTAAGTCTTCTTTTTTGATC---TTGCTATTCATCCACATTGGCGCCAATGG
AACTTTTTCAACCATGTTATGTATTTTCGCTATAGCACTTCTGTCGCTAGC-CCCCTGGGCTTCGCGTCGCCTCGCCGGG
CTGCTGCTAGCTGGGCCTCGCGCCTTGTGCTGTCTGGGCTTGTTGTAGCGGGCCGAGAGTTGCGTCGGCCTTCCGCGTCG
TAGGTTCAA--AGGCTCGAGAAGGTTCGCGCCGGTTCGCTCGCTCCTCCGATTCCTTCTCCGGCACCACCACC---GATC
CAGAGCGCGAGA----TCACGAACCTTCCAGGCCCCGCTCCCGGAAATCTCAAAAGCCGACGGCGCCACGCTCCGATCCA
TCGCAGCCGCAGCCTCCGGGAGAACCATC-------CAGATCGATCG------AGCCATTGCCATGGACGTCCTGAAGCG
CGAGCTGCAGCTCAAGCGCCGGCAGCTGGACGCCGACTTCGGCGGCCGCAAGGTGCTCCGCCGCGCCGAGATCGAGGCGC
TCGAGATCCAGCGCCTCCGCGTCGCCGAGCGGGAGCGCCTCATCCAGAAGAAGAAGGAGGAGGAGGAGCTCCGGTCCCGC
CCCGCCCCCGCGTCGTCTTCCTCCTCCTCGATGCCCGCGTTGCCTCCAGCCGCCGTCGCCAACGTGGCGAAGGCGTGCAA
CGACCGCGCGGAAGGTTCGCGGGAGTCGTCGTCGCTCCCGAGGGAGGAGGTGATCCGGCGCCTGCGCCTGCTGCGCCAGC
CGGCCACGCTCTTCGGCGAGGACGACGCCGCGCGCCTCCGCCGCCTCCACGACGCGCTCGAGGACCCCGCCGCGGTCGCG
GGCGTGGACGCCGCGGAGATCGGGGAGGGCCAGACCAACGACTTCCTCCGCGACTTCCAGGCCCCGCGCGCCAGGGCCGC
GGCCGTGGCGTCCAAGCCCAAGGCCGGCGCGGCCGACAGGAGCGACGGCGACGGCGAGAAAGAGAAGGAGGAGGCGCCGT
TCGACGAGCTCTGCGACGAGGACAAGATCGTGGCCTTCTTCAAGCGGCTGCTGAGCGAGTGGGGCCAGGAGCTGGACGAG
ACGCCGGACGCGGAGCGGCGCACGGCCAGGGGCAAGGCGGCGGTGGCCACCTGCAAGCAGTGCGCGCGCTACCTGGAGCC
GCTCTTCAGGCTGTGCAGGAAGAAGGCCCTCCCCGGCGACGTCCGGCGCGCGCTGCTGGACGTGGTGCGGTGCTGCGCGC
GGCGGGACTACCTGGCGGCGACGGACAGCTACATCAGGCTGGCGATCGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCACGCCAACGGCGTCGCCCACGTGATGAACGACGAGACGACGCG
GAAGTACC------TGCAGTCGGTGAAGCGGCTCATGACCTTCTGCCAGCGGAGGTACCCCACGGACCCCTCCAGGTCGG
TCGAGTTCAACAGCCTCGCCAACGGCAGCGACCTGCACTCCCTCC---TCCTCGCCGAGAAGAGCGCCGAGAA---CCAA
CCGGAGGAGACGCTCCGGCTGGTGGCTGCCTCCTGAC----GACGAATCACCATCGCCAATCTCTGCATTTTAGAAGCTC
AA----AACTTTACTGCCATTTGAC---------------GAAAATTGTTCTCTGGCTTTCTTGTTGGCTGATAAAGATC
TGGCTGTGATGATCAAGGCCTAAAGCCATCCTGATGACCGTATGTATGTTCATTATTTTGTTCTAGACGTGATAAAAAAG
TTGGGA-----GTGTGATGATGATTGCTAGTG---------TGTTGAACGTAGCAGCACTCTGTTCCTTCT---------
---------TGGACTGTTCCTCGAAGAAACAAAATCACAGGTACTGTGAAACTGTAAATTCGTTTTAAGTTCGTCCGAGA
ATTCATTTTAAGATGTGAAATTGAATAAATTTGAGCAAGTTCTGACTGCATGTAAATTTTCGTCGAGAATAGTCATGTGG
CAATCTGTGCAAAGAAAGGTAAAAACGTGTGCTCTTAAATGGCTTTTTTAGCACCAT-TTT-----------TTTTTCTT
TTTTGTCCGTACCATCACACATCTTTTCTTCGCTAAAATTTAAAACAAATATGCTAATTGTAAAAAAGAAGTTATTTTTC
TTCCGTACCTA---CTTTTTCTGATTTACAATTCATAGGGGG-CTCGTACTTGAATTTCAGCATCTCGGTGAGCTGCTTT
TGAAAAACAC-GGGGAAAATGCGTGCATGAAGGATGAGCTTTGGGTCACTATATTCACGAATGCTTCCAAGCTTCCACTT
TTTTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr4B_766
--------------------------------------------------------------------------------
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---------------------------------------------GCTAGC-CCCTTGGGCTTCGCGTCGCCTGGCCGGG
CTGCTGCTAGCTGGGCCTCACGCCGTGTGCTGTCTGGGCTTGTTGTAGCGGGCCGAGAGTTGCGTCGGCCTTCCGCGTCC
GAGGTTCAA--AGGCTCGAGAAGGTTCGCGCTGGTTCGCTCGCTCCTCCGCTTCCATCTCCGGCACCACCACC---GATC
CATAACGCGACC----TCACGAACCTTCCAGACCCCGCTCCCGGAAATCTCAAAAGCCGACCGCGCCACGCTCTGATCCG
TCGCAGCC------TCCGGGAGGACCATCGACTCCGCAGATCGACCGAGCCATAGCCATAGCCATGGACGTCCTGAAGCG
CGAGCTGCAGCGCAAGCGCCAGCAGCTGGACGCCGACTTCGGCGGCCGCAAGGTGCTCCGCCGCGCCGAAATCGAGGCGC
GTGAGATCCAGCGCCTCCGCGTCGCCGAGCAGGAGCGCCTCCTACAGAAGCGGCAGAAGGAGGAGCAGCTCCGGTCCAAC
CCCGCCGCCGCCTCCTCCTCCTCCTCCTCGATGCCCGCGTTGCCTCCAGCCGCCGCCTCCGACGTGGCGAAGGC---CGA
CGACCGAGCGGACGGTTCGAGGGATTCGTCGTCGCTCCCGAGGGAGGAGGTGGTCCGGCGCCTGCGTCTGCTGCGCCAGC
CGGCCACCCTCTTCGGCGAGGACGACGCCGCGCGCCTCCGCCGCCTCCACGACGCGCTCGAGGACCCCGCCGCGGTCGCG
GGCGTGGACGCCACCGAGATCGGGGAGGGGCAGACCAACGACTTCCTCCGCGACATCCAGGCCCCGCGCGGCAAGGCCGC
GGCCGTGGCGTCCAAGCCCAAGCCCGGCGCGGCCGAGAGGAGCGG------CGGCGAGAAAGATAAGGACGAGGTTCCTT
TCGACGAGCTCTGCGACGAGGACAAGATCGTGGCCTTCTTCAAGCGGCTGCTGGGCGAGTGGAGCCAGGAACTAGACGAG
ATGCCCGACGTGGAGCGGCGCACGGCCAGGGGCAAGGCGGCAGTGGCCACCTGCAAGCAGTGCGCGCGCTATCTGGAGCC
GCTGTTCAAGCTGTGCAGGAAGAAGGACCTCCCCGGCGACGTCCGGCGCGCGCTGCTGGACGTGGTGAGGTGCTGCGCGC
GGCGGGACTACCTGGCGGCGACGGACGCCTACATCAGGATGGCGATCGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCACGCCAACGGCGTCGCCCACGTGATGAACGACGAGACGACCAG
GAAGTACC------TGCAGTCCGTGAAGCGGCTCATGACCTTCTGCCAGCGCAGGTACCCCACGGACCCGTCCAGGTCCG
TCGAGTTCAACAGCCTCGCCAATGGCAGCGACCTGCAGTC---CC---TCCTCGCCGAGAAGGGCGCCGAGAA---CCGC
CCGGAGGAGACGCTCCGGCTGGTGGCTGCCTCTTGACAGACGACGAATCACCATCTCCAATCTCTGCATTGTAGAAGCTC
AACTCCAACTCTATTGCCATTTGAGAAACAGCTGATTACTGAAAATTGTTCTCTTGCGCTCTTGTTGGCTGATAAA-ATC
TGGCTGTGATGATCAAGACCTAAAGCCATCCTGATGACAGTTTGTATATTCATTATTTTGTTGTAGACACGGTAAAAA-G
TTGGGA-----GTGTGATGATGATTACTTTACTTGGTGTGCTCCTGAACGCAGCAGCACTCTGTTCCTTGTTCTGAAAAC
CACA-----TGGACGGTCCCTCAAAGAAACAAAATCACAGGTACTGTGAAACTGCAAATTCGTTTTAAATTTGTCCGAGA
ATTCATTTTAAGATGTGAAACTGAGTAAATTTGAGCAAGTTCTAACTGCATGTAAATTTTCGTCGAGAATAGTCATGTGC
CAATCTGTGCAAAGAAAGGCAAAAACGAGTGCTCTTAAAAGGTT------------T-TTC-----------TTCTTCTT
TTTTGTCAGTATCATCACACATCTTTACTTCGCTAAAATTTGAAACAAGTGTGCTAATTGTAAAAAGAAGGTTCTTCCTT
ACCTA------TTTTTTTTTCTGATTTACGATTCATAGGGGGGCTCACACTTGAATTTCAGCATCTCGTTAAGCTGCTTT
TGAAAAACAC-GGGGAAAATGCTTATATGAAGGATGAGCTTTGGGTCACTATATTCACAAATTCTTCGACGCTTCCAACT
TTTTTTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1A_1317
--------------------------------------------------------------------------------
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-------------------------------------------------CCGTCGTCGCCGACGTGGCGAAGGC---CGA
AGACCGAGCGGACGGTTCGAGGGAGTT---GTCGCTCCCGAGGGAGGAGGTGATCCGGCGCCTGCGTCTGCTGCGCCAGC
CGGCCACGCTCTTCGGCGAGGACGACGCCGCGCGCCTCCGCGGCCTCCACGACGCGCTCGAGGACCCCGCCGCGGTCGCG
GACGTCGACGCCGCCGAGATCGGGGAGGGGCAGACCAACAACTTCCTCCGCGACATCCAGGTCATGCGCGCCAAGGCCGT
GGTCGTGGCGTCCAAGCCCAAGCTCGGCGCGGCCGAGAGGACCAGC---------------GAGGAGAAGGAGGTGCCGT
T------------CGACGAGGACAAGATCGTGGCCTTCTTCAAGTGGCTGCTGAGCGAGTGGAGCCAGGAGCTGGACGAG
ATGCCCGACGCGGAGCGGCGCACGGCCAAGGGCAAGGCCGCGGTGGCCACCTGCAAGCAGTGCGCGCGCTACCTGGAGCC
GCTCTTCAAGCTCTGCAGGAAGAAGGCCCTCCCCGGCGACGTCCGGCGCGCGCTGCTGGACGTGGTGTGGTGTTGCATGC
GGCGGGACTACCTGGCGGCCACGGACAGCTACATCAAGCTGGCGATAGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCATACCAACGGCGTCGCCCACGTGATGGACGACGAGACGACGCG
GAAGTACC------TGCAGTCCGTGAAGCGGCTCATGACCTTCTGCCAGCGGAGGTACCCGACGGATCCCTCGAGGTCGG
TCGAGTTCAACAGCCTCGCCAACGGCAGCGACCTGCAGTC---CC---TCCTCGCCGAGAAGGGCGCCGAGAAGAAGCAC
CCGGAGGAGACGCTCCGGCTGGTGGCTGCCTCCTGATGT----CGAATAACCATCGCCAATCTCTGCATTTTAGAAGCTC
AAC------TTCAGTACCATTTGAGAAACAGCTGATTACTGAAAATTGTTCTCTTGCTCTTCGTGTT-------------
-----------------GCCTAAAATCATCCCGGTGGCCAT----------AGTATTTTGTTGTAGACGTGATAAAAA-G
TTGGGAATGTGGTGTGATGATAATTACTAGC------ATGCTGCTGAACGCAGCAGCACTCTGC----TGTTTTGAAAAC
CACA-----TGGACTGTCCCTCGAAGAAACAAAATCACAGGTACTGTGAAGCTGCAAATTCGTTTTAAGTTCGTCCGAGA
ATTCATTTTAAGATGTGAAACTCAGGAAATTTAAGCAAGTTCAAACTGCATGTAAATTTTCGTCGAGAGTAGTCACGTGG
CAATCTTTGCAAAGAAAGGCAAGAACGAGTGCTCTTAAAAGGTT------------TATTTAGCACCATTTTTTTTTCTT
TTTTGTCCGTACCATCACACATCTTTTCTTTGCTAA---TTTTTTTAAATGAGCTAATTGTAAAAAGAGCCTTTTTTGCT
TCATTACTTCTTTTCTTTTTCTGATTTACTATTCATAA-GGGGCTCACACTTGAATTTCAGCATCTCGGTGAGCTGTTTC
TGAAAATGACGGGGGGAAATGCGGACATGAAGGATCAGCTTTGGGTTACTATCTTCACAACCGATTCGAAGCTTCCACCT
TATTTTTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_1325
--------------------------------------------------------------------------------
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---------------------------------------------------------GCCGACGTGTCGAAGGC---AGA
AGACCGAGCGGACGGTTCGAGGGAGTT---GTCGCTCCCGAGGGAGGAGGTGATCCGGCACCTGCGTCTGCTGTGCCAGC
CGGCCACGCTCTACGGCGAGGATGACGCCGCGCGCCTCCGCCGCCTCC------------------CCGCCGCGGTCGCG
GACGTCGACGCCGCCGAGATCGGGGAGGGGCAGACCAACGATTTCCTCCGTGACATCCAGGCCCTGCGCGCCAAGGTCGT
CGTCGTGGCATCCAAGCCCAAGCTCGGCGCGGCCGAGAGGAGCAGC---------------GAGGAGAAGGAGGTGCCGT
TCGACGAGCTCTGCGACGAGGACAAGATCGTGGCCTTCTTCAAGCGGCTGCTGAGCGAGTGGAGCCAGGAGCTGGACGAG
ATGCCCGACGCGGAGCGGCGCACGGCCAAGGGCAAGGCCGCGGTGGCCACCTGCAAGCAGTGCGCGC--TACCTAGAGCC
GCTCTTCAAGCTATGCAGGAAGAAGGCCCTCCCCGGTGACGTCCGGCGCGCGCTGCTGGACGTGGTGTGGTGCTGCATGC
GGCGGGACTACCTGGCGGCCACGGACAGCTACATCAAGCTGGCGATCGGCAACTCGCCGTGGCCGATCGGGGTGACCATG
GTGGGCATCCACGAGCGGTCGGCCCGGGAGAAGATCCACACCAACGGTGTCGCCCACGTGATGGACGACGAGACGACGCG
GAAGTACCTGCAGCTGCAGTTCGTGAAGCGGCTCATGACCTTCTGCCAGCGGAGGTACCCGACGGATCCCTCGAGGTCGG
TCGAGTTCAACAGCCTCGCCAACGGTAGCGACCTGCAGTC---CC---TCCTCGCCGAGAAGGGCGCCGAGAAGAAGCAC
CCAGAGGAGACGCTCCGGCTGGTGGCTGCCTCCTGATGC----CGAATCACCATCGCCAATCTCTGCATTTTAGAAGCTC
AAC------TTCAGTACCATTTGAGAAACAGCTGATTACTGAAAATTGTTCTCTTGCTCTCTTGTTGT------------
-----------ATCTTGTTGTAAGTTCATCCCGGTGGCCGT----------ATTATCTTGTTGTAGACGTGATAAAAA-G
TTGGGATTGTGGTGTGATGATAATTACTAGC------GTGCTGCTGAACGCAGCAGCACTCTGC----TGTTTTGAAAAC
CACA-----TGTACTGTCCCTCGAAGAAACAAAATCACAGGTACTGTGAAGCTGCAAATTCGTTTTAAGTTCGTCCGAGA
ATTCATTTTAAGATGTGAAACTCAGGAAATTTAAGCAAGTTCAAACTGCATGTAAAATTTCGTCGAGAGTAGTCATGTGG
CAATCTTTGCAAAGAAAGGCAAGAACGAGTGCTCTTAAAAGGTT------------TATTTAGCACAA-TTTTTCTTCTT
TTTTGTCCATACCATCACACATCTTTTCTTGCATATT-------------------------------------------
--------------------------------------------------------------------------------
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-----
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----SS----------S-------------S---------
S-----S--------S---S--------------S--S------SS-SSSS-----------S-----------------
---------------------------------------------------S---------S-------S----------
--------S----------------------S-------S---------------------S------------------
---------SS--------------------S--S---S----------------------------------SSS----
------------SSSS---------------------------------------------------S-----S------
------------------S-------------------------------------------------------------
--------------S-----------------------------------------------------------------
--S--S-------------------------------------------------------------------S------
--------------------------------------------------------S-------S---------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---S-------------------------SS--------S---S-------SS---------------------------
----------------------------------------------------------S----S----------------
--------S-----------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SSS--------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----SSSSS---------------------------------------------------------------------S-
----------------------------------S---------------------------------------------
-------------------------S------------------------------------------------------
------------S------------------------S---S---S----------------------------------
-S---S------------------S-------------------------------------------------------
---------S--S------------------------------------------S------------------------
---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_890
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TTCCGCGTCG
TAGGTTCAAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2567
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------GACTGGACTGTCCCTCAAAGA-----------------------------------------------------
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