>input_sequence_53639
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--------------------------------------------------------ATGCTCCCCATCGCCTCACATGTT
GTCGTCCATCGTGCCTACCACACCACCACCTGCAGATGGAGAAGACCTCGGCTTGCAGGTAGAGGAGGCCTCGACCTGCA
GTTCTACAGTAGATGTGTCCAGGTAACTCTGCCAGGTAGTTGTGCCGGCTTCCTACTGTTTGAAAGATC-GCAACACGGG
TCGGCATCAACATGTTTGTCGTAGTGCAGTCCTAGTTGAGCCTCCCTTGTCTTCCTCATTGCTTGCGTTGGTGTCCAGGC
CTCCAATCGAACGGCTGCTTGGCCGCAAGATCAGCACAAC---AGCATGCTGATGGCATCTATTACCATGTTCTCATGGG
AAAAGCAGCTAGCTTGCCTTGAAGCAGCATCCATTACCTCGCGTTCTCCTGGTTGCTTCCTCCAACACAAGGACGAACAA
AGTGATTAGTTGGTTTGCTGCTACTCTTCTTCTACTACAGTGTGTCTTTAGATTCAAAGAAGTTCAGCTTTGCGCCAGAT
-AAAAGTTCAGTTTTATGTCCCTGCTCGCTCCCTCTCCCGTTTGCGCATTTCTCCATGGCTTTATCTTTGTTGAATCATA
GATTAACTAGAGCGACACAGAACCTCCTGACATCAGCGAATAGTGTGTGTGGCGATGACCGCGGACGACATGTTGTGTGC
GTGCGTGATGTCACTATTGACTTCTGCTGTCATACAAAATTAG---TTGTTGTTTTGAAGATTCTATAC---AACAGAAA
TTTAGGGAAATCAACTTGTTGTGCTACTGTAGATGGGTAGCATTTGGCCGCCCATGTGGGTGTTTATTCTTATTCCTTAT
AAAGAGGAAATTGTATGTGCTAGCTCATCGGATTTGTATAGAAAAA--AATGAATGATTATGTATTCAACAATTATGTGA
TCTTTTAGGTTTTAGCATCTGAAATGTATTGAGTTTTCTATGTGTATTACAGCAGTCCAAAAAGTTGTTTACCAGCGGTT
TGCTAGGCCGTCCGATACAGGATCTGGACTTCGGACAGACAAGTGAGGCACGGATTGCAGGACACGATCTCACCTTGCTT
TTTGTGTGAGCAGGAGGAGGGCACGGTGGATCACATCCTCATACATTGCGTCTATGCCAGTCAGGTGTGGTTCCAATGCT
TCACCAAGGTTGAGATCCCTTTGGAGCTGTTGCCACATGGACATGAAAGGGTGGAGGACTGGTGGGTAGCTTCGAGGAAG
AGGGTACCGAAGGTACAGCGGAAGGACTATGATTCTT--GTCACGGTGGTTTGTTGGAATTTATGG-AGCAGAGGAATAG
TATGGTTTTTGGTAGGAGCAACATGTGTAATGAACTAGATACGGTCAGGGACATTCTCAGGGAACGCTAA----------
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>chr2A_1_TraesCS2A01G239400
GTCGCTAGGGAGGGAGGCGGCCGGAGCTGGGGAAGGAGGTCGTCAGAGTTGCGGGGGACGGCGCCCGACGGTGGAAGGTG
GAGGTGAATCGGGAGGCTATGGGGTGGCGAGTGGATAAGAGTTTTTTTTTTCTCCTTGGGTAGGACGGGAACATACCGGT
TCGGGTTGGTGTTTTTGTTTCTGATGGAAGGCGCCGTATATAGGGACGAGAGTAACAAAATATTATTATGTTACTAGTAA
CAAAATAGCTCTGTCTTATATAGATAGTAGCACTATTCTGATCCTAGGATCAAAATAGTTATTCTGATCACACCGTGGGT
CTGATCGCATGTTTCTGAATCTGGAAACGTTAAGAAGGCTACCCACTCGAACTTCCCACTCGAAGAAAAAAACACCTAAA
GTCATCGCCGATCCCCACACAACGCCGCCGCCGGCCGACAGCATCTGGCAACCACGCGCCACCACGGCCTCCACCG----
-----------CCATACGCCGTCGTGGACTCTGCGTTCGCGCTCTCCACCGGCGGTCTCCCTCCCCTGCTTATACCTACG
GCGGCGGCCTCCCTCCCACTGCTTCAACCCATGGCGGCGGCCACCACTGCGCCGCCTTCCTCGTGTCCCACGTCGCCGGT
GCGCTCTCTCCCCGGCGGCCGACTCGCCTCCTCTGGCCCACGCGTCGTGCTCCTGCGGCCGCCCGCCCACGCGCACTGCC
AACCAAGCTCCGCCCTTGCATCTCGCCGCCACGACCGCTCCTCCACATCTTGGGATGCCGGCGCACCACCACCCTCCAAA
GGTCACCGGGATCTCGCTGCAGCCCGCCCCTCTGTGGATGAAGACCCCCGCGAGCCACTTCTGCCACATCTGTGATCCAC
CTCCTAGCAAAGTCCTAGATCCTCCGACGAGGATCCAGCTCCTCCCTGGCGCGCCGACGGAGACCCGCACACTCCACACT
GGCGCCATCTTCCGCTCGCCTCGAGC-TCCCACCGGCTCGCCCTGCCGCTGGTGCTATGCTCCCCATCGCCTCACATGTT
GTCGTCCATCGTGCCTACCACACCACCACCTGCAGATGGAGAAGACCTCGGCTTGCAGGTAGAGGAGGCCTCGACCTGCA
GTTCTACAGTAGATGTGTCCAGGTAACTCTGCCAGGTAGTTGTGCCGGCTTCCTACTGTTTGAAAGATC-GCAACACGGG
TCGGCATCAACATGTTTGTCGTAGTGCAGTCCTAGTTGAGCCTCCCTTGTCTTCCTCATTGCTTGCGTTGGTGTCCAGGC
CTCCAATCGAACGGCTGCTTGGCCGCAAGATCAGCACAAC---AGCATGCTGATGGCATCTATTACCATGTTCTCATGGG
AAAAGCAGCTAGCTTGCCTTGAAGCAGCATCCATTACCTCGCGTTCTCCTGGTTGCTTCCTCCAACACAAGGACGAACAA
AGTGATTAGTTGGTTTGCTGCTACTCTTCTTCTACTACAGTGTGTCTTTAGATTCAAAGAAGTTCAGCTTTGCGCCAGAT
-AAAAGTTCAGTTTTATGTCCCTGCTCGCTCCCTCTCCCGTTTGCGCATTTCTCCATGGCTTTATCTTTGTTGAATCATA
GATTAACTAGAGCGACACAGAACCTCCTGACATCAGCGAATAGTGTGTGTGGCGATGACCGCGGACGACATGTTGTGTGC
GTGCGTGATGTCACTATTGACTTCTGCTGTCATACAAAATTAG---TTGTTGTTTTGAAGATTCTATAC---AACAGAAA
TTTAGGGAAATCAACTTGTTGTGCTACTGTAGATGGGTAGCATTTGGCCGCCCATGTGGGTGTTTATTCTTATTCCTTAT
AAAGAGGAAATTGTATGTGCTAGCTCATCGGATTTGTATAGAAAAA--AATGAATGATTATGTATTCAACAATTATGTGA
TCTTTTAGGTTTTAGCATCTGAAATGTATTGAGTTTTCTATGTGTATTACAGCAGTCCAAAAAGTTGTTTACCAGCGGTT
TGCTAGGCCGTCCGATACAGGATCTGGACTTCGGACAGACAAGTGAGGCACGGATTGCAGGACACGATCTCACCTTGCTT
TTTGTGTGAGCAGGAGGAGGGCACGGTGGATCACATCCTCATACATTGCGTCTATGCCAGTCAGGTGTGGTTCCAATGCT
TCACCAAGGTTGAGATCCCTTTGGAGCTGTTGCCACATGGACATGAAAGGGTGGAGGACTGGTGGGTAGCTTCGAGGAAG
AGGGTACCGAAGGTACAGCGGAAGGACTATGATTCTT--GTCACGGTGGTTTGTTGGAATTTATGG-AGCAGAGGAATAG
TATGGTTTTTGGTAGGAGCAACATGTGTAATGAACTAGATACGGTCAGGGACATTCTCAGGGAACGCTAATTATGGGCAT
TGGCGAGAGGGAGTGGAGTGCTGCATTTTTGTGAGTAGTCGCTTTGGAGCTGGTTGAGGAGGACGTAGGCACGCCTTCTG
GTGATGCTCGCGGCTTGTAATATCTTGTAAGTATTTTTCTCCCTTTCTATAAAGCTAAGGCACGTCTTTCACGTGCTCTC
--AAAAAAAC--AATTCAATATAAATAGGAATAAATTTAGTTAT--ATATGTGTGTACTTCAGTAGCAGTTTGGTAAAAA
AAGGCATTCAACATAAGGGTGCAATGCGACAGAAGAAAAAACAACATGGGATATTGAAACAGAGGGCC------------
-------------------------------------------------------------------------GTACCTT
AATTCCCAGAAACGAGTGCCTTTTCTATACGGATCACATTCCAAAAAATTGTT---CTATTATGGTTGTGTCCTTGCACT
CATTTTTTTCTTCTGAAAATGTCGAAACAAGAATGACGGAAAGATTATTGTTAATTTGTTCCTGTGACGCTATAGATGTT
TGTTTACACT-AAAAAAAGTTC-------AGAAAAACAACACACTTGCAGTTTGTAAAAAAAACAAAAAAGGGTCAAAAA
GGACGAAAGGTTCAAATTAA-AATAACATATCAGTTGAATGTTTATAA-CTTTTTGGAACTTTCCTATTTCCAAAAAATC
AAGAAGTTCAAATGAAGTAACAACAACATTTTT-TCACGTTTCTAAAGAAATGCAAAGAAGGTCAAACTATAAAAATAGA
GCAGTTCAAAAATTATTTAAAAAATGGATTTCCCCATTTCTAAAAGAACCTAGAAGTTGAAATTAAAAGAGCGGAGTGTT
CCATGTTTATTGAAAAACTAGGTTTTTTTGTAAACGAAAGAAATAAAACCAAGACGTCCAATATAGTAAATAGAGCAAAA
AAATAAAAAAC--CTTAGATCTTCCCTGTTACTGAAGAAATAAAATCATCAATTTGATGTTCAACTATTTGTTCTTGTGC
TTTTAGAGAAAATGGA--TTTTCCTCATTTCTACGAAAAACCTAGAGGCTCAAACTTAA
>chr5D_323
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--GATCGCATGTTTCTGAATCTGGAAACGTTAAAAAGGCTGCCCACTCGAACTTCTCACATGAACAAAAAAACACCTCT-
GTCATCCCCGATCCCCACACAACGCCGCCGCTGGCCAACACCGTCTGGCAACCACGCGCCACCACGGCCTCCACCGTCGT
GCACTCCACCGCCATACACCATCGTGGACTCTGTGTCCGCGCTCTCCGCCGGCGGTCTCACTCCCCTGCTTCTACCTACG
GCGGCGGCCTACCTCCCCTTGCTTCAACCCATGGCGGAGGCCACCACTGCGCCGCCTTCCTCGTGTCCCACATCGCCGAT
GCGCTCTCTGCCCGGCGGCCGACGCGCCTACTCTTGCCCACGCACCGTGCTCCTGCGGCCACCCTCCCACGCGCACCGCC
AACCGAGCTCCACCCTTACATCTCGCCGCCACGACCGCTCCTCCAAATCTTGGGCTGCCGGTGCACCACCACCCTCCACA
GGTCATCGGGATCTCGCTGCAGCCCGCCCCTCTGTGGATGAAGACCCTCGCGAGCCACTTCCGCCGCATCTGTGATCCAC
CTCCGAGCAAAGTCCCAGATCCTCCGAGGAGGATCCAGCTCCTCCCTGGTGCACCGATGGAGACCCGCACACTCCACACT
GATGCCATCTGCCGCTCGCCTCGAGC-TCCCACCGGCTCGCTCTGCCGCTGGCGCTATGCTCCCCATCGCCGCACATGTC
GTCGTCCACCGTGCCTACCTCGCCACCACCTGCAGATGGAGAAGACCTCGGCCTGCAGGTAGAGGAGGCCTCGACCTGCA
GCTCTACAGTAGACGTGTCCGGGTGACTCTGCCAGGTAGTTGCGTCGGTTTCCTACTGTTCGAAAGATC-ATAGCACGGG
TCGGCATCAGCAGGTTTGCCATAGTGCAGTCCTAGTTGAGCCTCCCTTGTCTTCCTCCTTGCTTGCGTTGGTATCCAGGC
CTCCAATCGAACGGTTGCTTGGCCGCAGGATCAGCACAAC---AGCATGCTGATGGCATCTATTACCATGTTCTCATGGG
AAAAGCAGCTAGCTTGCCTTGAAGCAGCATCCATTACCTCGCGTTCTCCTGGTTGCTTCCTCCAACACAAGGACGAACAA
GGTGATTAGCTGGTTTGCTGCTACTCTTCTTCTACTATAGGGTGTCTTTAGATTCAAAGAAGTTCAGCTTTGCGCCAGAT
-AAAAGTTCAGTTTTATGTCCCTGCTTGCTCCCTCTCCCATTTGCGCATTTCTCCATGGCTTTCTCTTTGTAGAATCATA
GATTAACTAGAGCGACACATGACCTCCTGACATCAGCGAACAATGTGCATGGCGATGACCGCGGACGGCATGTTGTGTGT
GTGCGTGATGTCACTATTGACTTCTGCTGTCATACAAAATTAGTTGTTGTTGTTCTGAAGATTCCATAC---AACAGAAA
TTTAGGGAAATCAACTTGTTGTGCTACTGTACATGGGTAGCATTTGGCCACCCATGTCGGTTTTTATTCTTATTCCTGAT
AAAGGGAAAATTTTATGTGCTAGCTCATCGGATTTGTATAGAAAAA--A-TGAATGATTCTGTATTCAACCATTCTGTGA
TCTTTTTGGTTTTAGCATCTGAAATGTATTGAGTTTTCTATGTGTATTACAGCAGTCCAAAAAGTTGTTTACCAGCGGTT
TGCTAGGCCGTCCAATACAGGATCTGGAATTTGGACAGACGAGTGAGGCACAGATTGCAGGACACGATCTCACCTTGCTT
TTTGTGCGAGCAGGAGGAGGACACGGTGGATCACATCCTCATACATTGCGTCTATGCCAGTCGGGTGTGGTTTCAATGCT
TCACTAAGGTTGAGATCCCTTTGGAGCTGTTGCCACATGGACATGAAAGGGTGGAGGACTGGTTGGTAGCTTCGAGGAAG
AGGGTACCCAAGGTACAGCGGAAGGACTTCGATTCTTTCGTCACGTTGGTCTGTTGGAATTTATGGAAGCAGAGGAATAG
TATGGTTTTTGGTAGGAGCAACATGTGTAATGAACTAGATACGGTCAGGAACATTCTCAGGGAACGCCAATTATGGGTAT
TTGCGAGAGGGAGTGGACTTCTGCATTTTTGTGAGTAGTCGCTTTGGAGCTGGTTGAGGAGGATGTAGGCACGCCTTCTG
GTGATGCTTGCGGCTTGTAATATCTTGTAAATATTTTTCTCCCTTTCTATAAAGCTAAGGCACGCCTTTCGCGTGCTCTC
GAAAAAAAAC--AGTTCAATATAAATAAGAATAAATTTAGTTAT--ATATGTGTGTACTGCAGTAGCAGTTTGGTAAAAG
AAGGCATTCAACGTAAGGGTGCAATGCGACAGAAGAAAAAATAACATGGGATATTGAAACAGAGGGCATGTGCAGTGGTC
AAAGTGGCAAAGGATGAGCATAAACAAATGAGTGGTGGATACAATTCACTACTTTTAGTGTATAAAACAAAATGTACCTT
AATTCCCAGAAACGAGTGTCTTTTCTATACGGATCACATTCCAAAAAATTGTT---CTATTATGGTTGTGTCCTTGCACT
CATTTTTTTCTTCTGGAAATGTCGAAACGAGAATGACGGAAAGATTGTTGTTAATTTGTGCCTGTGACGCTATAGATGCT
TGTTTACACT-AAAAAACA-AAAAGTTCAAAAAGAACAACACACTTGCAGTTTGTAAAATAAACAAAAAAAGGTCAAAAA
GGATGAAAGGTTCAAATTGA-AATAACATATAAGTTGAATGTTTATAA-CTTTTTGGAACTTTCCCATTTCCAAAAAATC
AAGAAGTTCAAATGAAGTAACAATAACATTTTTTTCACGTTTCTAAAGAAATCCCAAGAAGGTCAAACTATAAAAATAGA
GCAGTTCAAAAATTATTAAATAAATGGATTTCCCCATTTCTAAAAGAACCTAGAAGTTGAAATTAAAAGAGCGGAGTGTT
CCATGTTTATTGAAAAACTAGGTTTTTTTGTAAATGAAAGAAATAAAACCAAGACGTCCACTATAGTACATAGAGCAAAA
AGATATTTAAAATCTTAGATTTTCCCTGTTACTGAAGAAATAAAATAATCAATTTGATGTACAACTATTTGTTCTTGTGC
TTTTAGAGAAAATGGA--TTTTCCTCGTTTCTACGGAAAACCTAGAGGCTCAAACTTAA
>chr6A_538
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------------------------------------------------------------------------TACCTAAG
GCGGCAGCCTCCCTCCCCCTGCTTCAACCCATGGCGGCGGCCACCACTGCGCCGCCTTCCTCGTGTCCCACGTCGCCGGT
GCGCTCTCTCCCCGGCGGCCGACGCGCCTCCTTTTGCCCATGCGTCGTGCTCCTGCGGCCGCCCGCCCA--CGCACCGCC
AACCGAGCTCCGCCCTTACATCTCGCCACCACGACCGCTCCTCCACATCTTGGGCTGCCGGCGCACCACCACCCTCCATA
GGTTATCAGGATCTCGCTGCAGCCCGCCCCTCTGTGGATGAAGACCCCCATGAGCCACTTCTGCCGCATCTGTGATCCAC
CTTCGAGAAAAGTCCTAGATCCTCCGACGAGGATCCAATTCCTCCCTGGCGCGCCGACAGAGACCCGCACACTCCATGCT
GACGCCATCTGCCGCTCGCCTCGAGCTTCCCACCGGCTCGCCCTGCCGCTGGCGCTATGCTCCCCATTGCCGCACATCTC
GTCGTCCACCGTGCCTACCTCGCCACCACCTGCAGATGGAGAAGACCTTGGCCTGCAGGTAGAGGAGGCCTCGACCTGCA
GTTCTACAGTAGACGTGTCCGGGTGACTCTGCCAGGAAGTTGCGCCGGCTTCCTACTGTTCGAAAGATC-GCAGCACGGG
TCGGCATCAGCAAGTTTGTCGTAGTGCAGTCCTAGTTGAGCCTCCCTTGTCTTCCTCCTTGCTTGCGTTGGTGTCCAGGC
CTCGAATCGAACAGCTGCTTGGCCGCAATATCAGC---AC---AGCGTGCTGATGGCATCTATTACCATGTTCTCATGGG
AAAAGCAGCTAGCTTGCCTTGAAGCAGCATCCATTACCTCGTGTGCTCCTGGTTGCTTCCTCCAACAGAAGGACGAACAA
AGTGATTAGCTGGTTTATTGCTACTCTTCTTCTACTACAGTGTGTCTTTAGATTCAAAAAAGTTTAGCTTTGCGCCAGAT
-AAAAGTTCAGTTTTATGTCCCTGCTCGCTTCCTCTCCCGTTTGCACATTTCTCCATGACTTTCTCTTTGTTGAATCATA
GATTAACTAGAGCGACACAGGACCTCCTGACATCAGCGAACAGTGTCCGTGGCGATGACCACGGACGGCATGTTGTGTGC
GTGCGTGATGTCACTATTGACTTCTGCTGTCGTACAAAATTAGTTGTTGTTGCTCTGAAGATTATATAC---AACAGAAA
TTTAGGGAAATCAACTTGTTGTGCTACTGTAGGTGGGTAGCATTTGGCCACCCATGTGGGTGTTTATTCTTATTCCTGAT
AATT-GAAAATTGTATGTGCTAGCTCATCAGATTTGTATAGAAAAAT-A-TGAATGATTCTGTATTCAACCATTCTATGA
TCTTTTTGGTTTTAGCATTTGAAATGTATTGAGTTTTCTATGTGTATTACAGCAGTCCAAAAAGTTGTTTACCAGCGGTT
TGCTAGGCCGTCCAATACAGGATTTGGACTTCGGACAGACGAGTGAGGCACGGATTGCAGGACATGATCTCACCTTGCTT
TTTGTGCAAGCAGGAGGAGGACACGGTTGATCACATCCTCATACATTGCGTCTATGCCAGTCAGGTGTGGTTTCAATGCT
TCATCAAGGTTGAGATCCCTTTGGAGCTGTTGCCACATGGACATGAAAGGGTGGAGGACTAGTGGGTAGCTTCGAGGAAG
AGGGTACCCAAGGTACAGTGGAAGGACTTCGATTCTTTGGTCACGTTGGTCTGTTGGAATTTATGGAAGCAGAGGAATAG
TATGGTTTTTGGTAGGAGCAACATGTGTAATGAACTAGATACGGTCTGGAACATTCTCAGGGAACGTCAATTATGGGCAT
TGGCGAGAGAGAGTGGAGTGCTGCAATTTTGTGAGTAGTCGCTTTGGAGCTTGTTGAGGAGGATGTAGGCACGCCTTCGG
GTGATGCTTGCGGCTTGTAATATCTTGTAAATATTTTTCTCCCTTCCTATAAAGTTAAGGCACGCCTTTCGCGTGCTCTT
--GAAAAAAC--AGTTCAATTTAAATAGGAATAAATTTAGTTAT--ATATGTGTGTACTGCAGTAGCAGTTTGGTAAAAG
AAGGCATTCAACGTAAGGGCGCAATGCAACAGAAGAAAAAACAACATGGGATATTCAAACAGAAGGCATGTGCGATGGTC
AAAGTGGCAAAGGATGAGCATAAACAAATGAGTGGTGGATACAATTCACTACTTTTAGTGTATAAAACAAAATGTACCTT
AATTCCGAGAAACGAGTGTCTTTTCTATACGGATCACATTCCAAAAAATA-TT---CTATTATGGTTGTGTCCTTGCACT
CATTTTTTTCTTTTGGAAATGTCGAAACGAGAATGACGGAAAGATTGTTGTTAATTTGTTCCTGTGACGCTATAGATGTT
TGTTTACACT-AAAAAACA-AAAAGTTCAGAAAGAACAACACACTTGCAGTTTGTAAAATAAACAAAAAAAGGTCAAAAA
GGAAGAAAGGTTCAAATTAA-AATAACATATCAGTTGAATGTTTATAA-CTTTTTGGAACTTTCCCATTTCCAAAAAATC
AAGAAGTTCAAATGAAGTAACAACAACATTTTT-TCACGTTTCTAAAGAAATCCCAAGAAGGTCAAACTATAAAA-TAGA
GCAGTTCAAAAATTATTAAAAAAATTGATTTCGCCATTTCTAAATGAACCTAGAAGTTGAAATTAAAAGAGCGGAGCGTT
CCATGTTTATTGAAAAACTAGGTTTTTTT-TAAACGAAAGAAATAAAACCAAGACTTCCAATATAGTACATAGAGCAAAA
AAATATAAAAAAACTTAGATTTTCCCTGTTACTGAAGAAATAAAATCATCTATTTGATGTTCAACTATTTGTTCTTGTGC
TTTTAGAGAAAATGGA--TTTTCCTCGTTTCTACGAAAAACCTAGAGGCTCAAACTTAA
>chr6D_1053
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----------------------------CCTGCAGGTAGAGGAGGCCTCGACCTGCGTCTAGAGGAGGACTCAACCTGCA
GTTCTACAGTAGACGCGTCCGGGTGACTCTGCCAGGTTGTTGCGCCGGCTTCCTACTGTTCGAAAGATGGGCAGCGTGGG
TCGGCATCAGCAGGTTTGCCGTAGTGCAGTCCAAGTTGAGCCTCCCTTGGCTTCCTCCTTGCTTGCGTCGGTGTCCAGGC
CTCCAATCGAACGGCTGCTTGGCTGCAGGATCAGC---ACAGCAGCGTGCTGATGACATCTCTTACCATGTTCTCATGGA
AAAAACAGCTAGCTTGCCTTGAAGCAGCATCCATTACCTCGCGTGCTCCTGGTTGCTTCCTCCAACACAAGGACGAACAA
AGTGATT----GGTTTGCTGCTGCACTTCTTCTACTATAGTATGTCTTTAGATTCAAAGAAGTTCAGCTTTGCGCCAGAT
-AAAAGTTCAGTTTTATGTTCCTGCTCGCTCCCTCTCCCGTTTGCGCATTTCTCCATGGCTTTCTCTTTGTTGAATCATA
GATTCACTAGAGTGACACAGGACATCCTGACATCAGCGAATAGTGTGCGTGGCGATGACCACGGACGGCATGTTGTGTGC
GTGCGTGATGTCACTATTGGCTTCTGCTG-----------------TTGTTGTTCCAAAGATTCTGTAATTTAACAGAAA
TTTAGGGAAATCAGCTTGTTGTGCTA---TAGATGGGTAGCATTTGGCCACGCATGTGGGTGTTTATTCTTATTCCCGAT
AAAGGGAAAATTGTATGTGCTAGCTCATCAGATTTGGATAGAAAAAT-A-TGAATGATTCTGTATTCAACCATTCTGTGA
TCTTTTTGGTTTTAGCGTCTGAAATGTATTGAGTTTTCTATGTATATTACAACAGTCCAAAAAGTTGTTTACCAGAGGTT
TGCTAG--A-----------------------------------------------------------------------
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-AAAAAAAGC--AGTTCAATATAAATAGGAATAAATTTAGT--T--ATATGTGTGTACTGCAGCAGCAGTTTGGTAAAAA
AGA-CACTCAACGTAAGGGTGCAATGCGAGAGAAGAAAAAACAACATGGGATGTTGAAACAGAGGGCATGTGCGGTGGTC
AACGTGGCAAAGGATAAGCATAAAAAAATGAGTGGTGGATACAATTCACTACTTTTAGTGTATAAAACAAAATGTACCTT
AATTCCCAGAAACGAGTGT-TTTTCTATACGGATCACATTCCAAAGTTTTTTTTTCCTATTATGGTTGTGTCCTTGCACT
CATTTTTTTCTTCTCGAAATGTCGAAACGTGAATGATGGAAAGATTGTTGTTAATTTGTTCCTGTGACGCTATAGATTTT
TGTTTACACT-AAAAAATAGAAAAGTTCAAAAAGAACAACACACTTGCAGTTTGTAAAATAAACAAAAAGGAGTCAAAAA
GGACGAAAATTTCAAATTAA-AATAACATATCAGTTGAATGTTTATAA-TTTTTTGGAACTTCCCCATTTCCAAAAAATC
AAGAAGTTCAAATGAAGTAACAATAACATTTTT-TCATTTTTCTAAAGAAATCCCAAGAAGGTCAAACTATAAAAACAGA
GAAGTTCAAAA-TTATCTAAAAAATGGATTTCCCCATTTCTAAAAGAACCTAGAAGTTCAAATTAAAAGAGCGGAGCGTT
TCATGTTTACTGAAAAACTAGGATTTTTCGTAAATGAAAGAAATAAAACCAAGACGTCCAAAATAGTAGATAGATCAAAA
AATTATAAA-AAACTTAGATTTTCAATGTTACCGAAGAAATTAAATCATCAATTTGATGTTCAACTATTTGTTCTTGTGC
TTGTAGAGAAAATGGA--TTTTCCTCGTATCTACGCAAAACCTAGAGGCTCAAACTTAA
>chr4A_1053
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----------------------------CCTGCAGGTAGAGGAGGCCTCGACCTGCATTTAGAGAAGGACTCGGCCTGCA
GTTCTACAGTAGACGCGTCCGGGTGACTCTGCCAGGTAGTTGTGCAGGCTTCCTACTATTCAAAAGATGGGCAGCGCGGG
TCGGCATCAGCAGATTTCT-GTAGTGCAGTCCAAGCTGAGCCTCCCTTGGCTTCCTCCTTGCTTGCGTTGGTGTCCAGGC
CTCCAATCGAACGGCTGCTTGGCCGCAGGATCAGCACAAC---AGCGTGTTGATGGCATCTCTTACCATGTTCTCATGGA
AAAAGCAGCTAGCTTGCCTTGAAGCAGCATCCATTACCCCGCGTGCTCCTAGTTGCTTCCCCCAACACAAGGACGAACAA
AGTGATT----GGTTTGTTGCTGCTCTTCTTCTACTACAGTATGTCTTTAGATTCAAAGAAGTTCAGCCTCGTGCCAGAT
AAAAAGTTCAGTTTTATGTTCCTGCTCGCTCCCTCTCCCGTTTGCGCATTTCTCCATGGCTTTCTCTTTGTTGAATCATA
GATTCACTAGAGCAACACATGATATCCTGATATCAACTAACAGTGTGCATGGCGATGACCGTGGACGGCATGTTGTGTGT
GTGCGTGATGTCACTACTGGCTACTGTTG-----------------TTGTTGTTCTGAAGATTCTGTAATTTAACAGAAA
TTTAGGGAAATCAACTTGTTGTGCTACTGTAGATGGGTAGAATTTGGCCACCCATGTGGGTGTTTATTCTTATTCCTGAT
AAAGGGAAAATTGTATGTGCTCGCTCATCAAATTTGAATAT--AAAAAA-TGAATGATTCTGTATTCAACCATTATGTGA
TCTTTTTAGTTTTAGCGTTTAAATTGTATTGAGTTTTCTATGTGTATTACAACAGTCCAAAAAGTTGTTTACTAGCGGTT
TGCTAGA-------------------------------------------------------------------------
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--AAAAAAAAGAAGTTCAATATAAATAGGAATAAATTTACTTAT--ATATGTGTGTACTGCAGCAACAATTTGGTAAAAA
AAGGCATTCAACGTAAGGGTGCAATGCGACAGAAGAAAAAACAACATGGGATATTGAAATAGAGGGCATGTGCGGTGGTC
AAAGTGGCAAAGGATAAGCATAAA-AAATGACTGGTGGATACAATTCATGACTTTTAGTGTATAAAACAAAATGTACCTT
AATTCCCATAAACGAGTGTCTTTTCTATACGGATCCCATTCCCAAAAATTGTT---CTATTATGGTTGTGTCCTTGCACT
CATTTTTTTCTTCTGGAAATGTCGAAATAAGAATGATGGAAAAATTGTTGTTAATTTGTTCTTGTGACGCTATAGATTTT
TGTTTACACT-AAAAACAA-AAAAGTTCAAAAAGAACAACACACTTGCAGTTTGTAAAATAAACAAAAAAGGGTCAAAAA
GGACGAAAAGTTCATATTAAAAATAACATATCAGTTGAATGTTTATAA-TTTTTTGGAACTTTCCCATTTCCAAAAAATC
AAGAAGTTCAAATTAAGCAACAATAACAATTTT-TGCTATAAAAACAG--------AGAAGGTCAAACTATAAAAACAGA
GAAGTTCAAAAATTATCTAAAAAATGGATTTCCCCATTTCTAAAAGAACCTACAAGTTCTAATTAAAAGAGCGGAGAGTT
TCATGTTTACTGAAAAACTATGGTTTTTCGTAAATGAAAGAAATAAAACCAACACATCCAAAATAGTAGATAGATAAAAA
AAATATAAA-AAACTTAGATTTTCCCTGTTACCGAAGAAATAAAATCATCAATTTGATGTTCAACTATTTGTTCTAGTGC
TTGTAGAGAAAATGGATTTTTTTCTCGTTTCTACAAAAAACCTAGAGGCTCAAACTTAA
>chr1D_1792
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----------------------------------------------------------GGTGTTTATTCTTATTCCTGAT
AAAGGGAAAATTGTATGTGCTAGCTCATCAGATTTGTATAGAAAAAAAA-TGAATGATTCTGTATTCAACCATTCTGTGA
TCTTTTTGGTTTTAGCGTATGAAATGTATTGAGTTTTCTATGTGTATTACAGCTT---AAAAAGTTGTTTACCAACGGTT
TGCTAGAAA-----------------------------------------------------------------------
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-AAAAAAAGC--AGTTCAATATAGATAGGAATAAATTTAGT--TATATATGTGTGTACTGCAGTAGCAGTTTGGTAAAAA
G-GGCATCCAACGTAAGGGTGCAATGCGACAGAAGAAAAAACAACATGGGATACTGAAACAGAGGGCATGTGCGGTGGTC
AAAGTGGCAAAGGATGAGCATAAACAAATGACTGGTGGATACAATTCACTACTTTTAGTGTATAAAACAAAATTTACCTT
AATTCCCAGAAACGAGTGTCTTTTCTATACGGATCACATTCCAAAAAATTGTT---CTATTATGGTTGTGTCCTTGCACT
CATTTTTTCCTTGTGGAAATGTCGAAACGAGAATAACGGAAAGATTGTTGTTAATTTGTTCATGTGACGCTATAGATGTT
TGTTTACACTAAAAAACAA-AAAAGTTCAAAAAGAACAACACACTTGCAGTTTGTAAAATAAACAAAAAAGG-TCAAAAA
GGACGAAAAGTTCAAATTAA-AATAACATATCAGTTGAATTTTTATAAATTTTTTGGAACTTTCCCATTTCCAAAAAATC
AAGAAGTTCAAATGAAGTAACAATAACATTTTT-TTACATTTCTAAAGAAATCCCAAGAAGGTCAAACTATAAAGATAGA
GTAGTTCAAAAATTATTAAAAAGGTGGATTTCCCGATTTCTAAAAGAACCTAGAAGTTCAAATTAAAAGAGCGGAGTGTT
CCATGTTTATTGAAAAACTAGGATTTTTCGTAAATGAAAAAAATAAAACCAAGACGTCCAAAATAGTAGATAGAGCAAAA
GAATTATAAAAAACTTAGATTTTCCCTGTTACCGAAGAAATAAAATCATCAATTTGATGTTCAACTACTTGTTCTTGTGC
TTGTAGAGAAAATGGATTTT--CCTCGTTTCTACGAAAAACCTAGAGGCTCAAACTTAA
>chr1A_1809
CTTA----------------------------------------------------------------------------
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------------------------------------------------------------------------------AT
AAAGGGAAAATTGTATGTGCTAGCTCATCAGATTTGTATAG-AAAAAAA-TGAATGATTCTGTATTCAACCATTCTATGA
CCTTTTTAGTTTTAGTGTATGAAATGTATTGAGTTTTCTATGTGTATTACAGCAGTCCAAAAAGTTGTTTACCAGCAGTT
TGCTAGA-------------------------------------------------------------------------
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--AAAAAAGC--AGTTCAATATAAATAGGAATAAATTTAGT--TATATATGTGTGTACTGCAGTAGCAGTTTGGTAAAAA
G-GGCATTCAACGTAAGGGTGCAATGCGACAGAAGAAAAAACAAAATGGGATACTGAAATAGAGGGCATGTGGGGTGGTC
AAAGTGGCAAAGGATGAGCATAAACAAATGAGTGGTGGATACAATTCACTACCTTTAGTGTATAAAACAAAATTTACCTT
AATTCCCATAAACGAGTGTCTTTTCTATACGGATCACGTTCCAAAAAATTGTT---CTATTATGATTGCGTCCTTGCACT
CATTTTTTCCTTGTGGAAATGTCGAAACGAGAATAACAGAAAGATTGTTGTTAATTTGTTCCTGTGACGCTATAGATGTT
TGTTTACACTAAAAAACAA-AAAAGTTCAAAAAGAACAACACACTTG---------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>chr1D_1973
GCTGG---------------------------------------------------------------------------
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-------CCGTCCAATACAGGATTTGGACTTCGGATAGACGAGTACGACACGGATTGCAGGACATGATATCTCCATGTTT
TTTGTGTGAGCAGGAGGAGGACACGGTGGATCACATCCTCACACATTGTGTCTATGCAAGGCAGGTCTGGTTTCAATGCT
TCACCAAGGTTGAGATCCCTTTGGAGCTGATGCCAAATGGACATGAAAGGGTCGAAGACTGGTGGGTAGCTTCGAGGAAG
AGGGTGCCCAAGGCACAGCGGAAGGACTTCGACACCTTTGTCATTTTGATTTGTTGGAGTTTATGGAAGCAGAGGAATGG
TAGGGTTTGTGGTAGGAACAACTTGTGTAATGAACTAGAGTTGGTTAGGGACATTTTCAGGGAACGCCAATTATGGGCGC
TAGCGAGAGGGAGTGGGGTGCTACATTTTTGCGAGTAGTCTCTTAGGAGGTGGTCGAGGAGAATGTAGGCACGCCTT-TG
GTGATGCTTGCAGCTTGTAATATCTTATAAATATGTTTCTTCCCTTCTATAAAGCTAAGGCACGCCTTTCACGTGCTCTC
--AAAAAAAAAA--------------------------------------------------------------------
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>chr2B_1973
GCTGG---------------------------------------------------------------------------
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-------CCGTCCAATACAGGATTTGGACTTTGGATAGACGAGTATGGCACGGATTGCAGGACACGATATCTCCATGTTT
TTTGTGTGAGCAGGAGGAGGGCACGGTGGATCACATCCTCACATATTGTGTCTATGCAAGGTAGGTATGGTTTCAATGCT
TCACCAAGGTTGAGATCCCTTTGGAGCTGATGCCAAATGGACATGAAAGGGTGGAAGGCTGGTGGGTAGCTTCGAGGAAG
AGGGTGCCCGAGGCACAGCGGAAGGACTTCGATTCCTTTGTCATGTTGATTTGTTGGAGTTTATTAAAGCAGAGGAATGG
TAGGGTTTTTGGTAGGTACAACTTATGTAATGAATTAGAGTTGGTCAGGAACATTTTCAGGGAACGCCAATTATGGGCGC
TAGCGAGAGGGAGTGAAGTGCTACACTTTTGGGAGTAGTCTCTTAGGAGGTGGTCGAGGAGAATGTAGGCACGCCTT-TG
GTGATGCTTGCGGCTTGTAATATCTTGTAAATAATTTTCTCCCCTTCTATAAAGCTAAGGCACGCCTT--GCGTGCTCTC
--AAAAAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>SNPs
--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------------------------------S------S--------------S---SS---S------------SSS
------S------------------------S----S---S-S-------------------------------------
-----------------S--S------------S--S----------S-----------S-----------S--------
-----------------S--------------------------------------------------------------
-----------------------S----------S-----------------------------------------S---
----S------------S------------------------------------S-----------------------S-
-----S-----------------------------------------------------------S--------------
----S---------------------------------------------------------------------------
-S--------S-----------------------------------------S------------------S-------S
--------S----------S-S------------------------------S---------------------------
-------------S------S---S-----------------------------------S------------S------
---------S--S--------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------S--------------------------S-------------------S------------
------------------------------------------------------S-------------------------
-------------------------------------------------S---------------------------S--
----S-S------------------------------------------S---------S----------S---------
------S-------------------------------------------------------------------------
-------------S--------------------------S---------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------S-------------------SS---------------S----------------------------------
-------------------------------------------------------------------S------------
---------------------------------------------------------------S----------------
--------S---------------------S---------------------------------S---------------
-------------S---------------------------------------------S--------------------
------------S------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------S------------------------------S---------------------------------
------------------SSSS--------S--S-------------------------S--------------------
-----------------------------------------------------------------S--------------
----------------------------------------------------S-S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
----------S---------S-----------------------------------------------------------
--------------------------S--------------------------------
>forward_102
--------------------------------------------------------------------------------
--GGTGAATCGGGAGGCTATGG----------------------------------------------------------
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>reverse_1181
--------------------------------------------------------------------------------
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------------------------------------------------------------TGAAAGATCGCAACACGGGT
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-----------------------------------------------------------
>forward_1093
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------AGATGGAGAAGACCTCGGCT---------------------------
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-----------------------------------------------------------
>reverse_2249
--------------------------------------------------------------------------------
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--------GAAGGTACAGCGGAAGGACT----------------------------------------------------
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-----------------------------------------------------------
>forward_1258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------AGCCTCCCTTGTCTTCCTCA----------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_2653
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------ATAAGGGTGCAATGCGACAGA-----------------------------------------------
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-----------------------------------------------------------
