>input_sequence_53616
--------------------------------------------------------------------------------
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--------------------------------------------------------ATGACTTTCCCCATGGCCACCTCC
ACCGCCTCCACGGCCGCCGCCGCTTCCCTCCGCCTTCTCCCGGTGCCAGCCACCCCATCCTCCCGCACTCTCCGCTTCTC
GCCCATCCTCCGCCGCGCGCCCCGCGCCCTCTTATCCGTCTCCGCCCTCAGCAAGCTCTCCGAGGCGCCCCCCGTCCCCA
TCCCGCAGGAGGCCACCCAGACTTTGCCCGGCGAGGACGCGCTTCCCCCTAGGCCCGGGGTCTACGGCGTCTTCGACCCC
GCCGGGGACCTGCAGTTTCTCGGGATCTCGCGCAACGTCAGGGCCAGCGTCGAGGGGCACCGCAGAAAGGTGCCCGCTGA
CCTCTGCGCCTCCGTCAAGGTATACACAATTACGCATCTCCCATTCTGTAGGATTTCATTTACATCATGGAACTGGATTG
CGCAAAGGGT-------------------------------------GTCCTGTAGTGTTTGATGATGAAGGCTACTGAA
GTGATCATGGTTTCTTCTCAACAAGTTTACCTTAAGGGTTGGTTGCTATACACAAATATGTTGGCTGTCCCACGGTCTTG
CTATACACTTCTGCAAATGATTGCCCTGTCCCACGGTCTTGCTATACACA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTTA
ATCACTAATGACTACGTATCAACTCCCAGTTATCTCTCTAC-------------------------------CAGTCGAC
TGAGATTTAAGCAAGTCTCAGTCAAGTGACATAACATGCAAAAGAGAAAAAGAAAAAACTGAAAAGAAAATTTTGCACGA
ATCTTAATGTAAGATCTCACAGATATAGCATCGACTGAGACTTTGTTAAGTTTCAGTCGACTGAGACTTAGCAAGACTGT
TTGACATACTACTTGAGGATTTGATCACACCTATTTCTACAGGTTGCAATACCAGACGAGGAAACACCAGATAAAAGTGT
CCTGACTAATGCCTGGAAATCATGGATGGAAGAATACATAGCAGCCACTGGCAAGGCACCACCAGGGAACGTTGCCGGGA
ACCACACCTGGATCGGTCCTCCACAGAGACCTGCAGATTTGCGTTTGACTCCTGGTCGCCATGTTCAGCTAACTGTGCCA
CTTGAACAGTTGATTGATCGGTTAGTGAAGGAAAATAAAGTGGTTGCCTTCATCAAAGGATCAAGAAGTGCTCCCCAGTG
TGGGTTCTCGCAAAGAGTGGTGGGGATCCTGGAGGCACATGGAGTGGATTTTGCATCCGTAGATATTCTTGATGAGGAGC
ACAACCATGGGTTGAGAGAGACCCTCAAGACCTACAGCAACTGGCCAACCTTCCCACAGGTTTTTGTTGGAGGAGAACTT
GTGGGCGGATGTGATATTATTTCATCCATGGCTGAAAAGGGGGAGCTTGCTGCCCTATTTCAGAAATAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr5D_1_TraesCS5D01G159600
CAAAGAGCACCTATTTGAGGCTTTTTATGATTTATGATGGTGCGTCAAATAGATAGGATTTTTTTAT-GAGAAAATAGTC
AGGATTGGGACCTCCGATTCCCCGCCTTCGGCGCCGAGATGGCGTTATAACAGGCACACACGCTCGCTCTACACCCTTTG
ACCACTATGTTTTAGCATGGCGCTCA-CTCATCTAAAAAGCAGTTGTTGGTGGCTCAGTAAAAAATTGTGTATAGGTTTT
TGATAGATTTCAAAAAAAAATCCATTTAGAAAAATACAACCCAATAATGGGATGTTGACCACTGCTCCAGCATATGGGCC
GGGCAAAATACAACCCAATAATCTATAGTTTATTTTTAATCATTCCAAAACTTTTAAAAATATATACTTCAGAATTATGT
TGAGAAAATATTTTGTAACAACTTATAAAATAGAAATAAAAGACTAAAAGTGCATTTCAAGAATGTTTGTCATGTATCTA
AAAAATGTTTATCATGTGTTAAAAAAGTACAATGTATACTAAAAAT-CGTCGTTTTTTCTTCAAGAAGTGTCGTGTACAT
GGTAGAAAACTCAATGAAGATTTTAAAATAATGGCTAATTATAAGATGTTATAACCTTTTTACGAATCAGATGTTTATAG
AAGCGTTTCACTGTGTTTGTTCACTCATTTTAGTCTGTATGTAGTCCATATTGAAATATCCAAACATCTTATAATTCGTA
CGGAAGGAATAATAATGACCTGGAAAAATAAAAGGGAAAAGAAGACAGAAAAAAAAACGAAAACCGGCTGACAAAACCGG
CAAATGGGGCTGGCCCAGAGTATTTACCCGAAAAAAAAA--TAACATTTTGCGTATCGGAGCAACTAGTCCAATTTGTTA
AAAAGTTGGGCTTTTC-----------GCAGTCGGCCGTGTGCCATCGAGCCCAGTTCGAGAAGAAGAACACGCGGCTGG
ACATCATCGTCTCCACACACCTCCACCTCACCTTTCTCCGGCTCAACCGCGCTACCATGACTTTCCCCATGGCCACCTCC
ACCGCCTCCACGGCCGCCGCCGCTTCCCTCCGCCTTCTCCCGGTGCCAGCCACCCCATCCTCCCGCACTCTCCGCTTCTC
GCCCATCCTCCGCCGCGCGCCCCGCGCCCTCTTATCCGTCTCCGCCCTCAGCAAGCTCTCCGAGGCGCCCCCCGTCCCCA
TCCCGCAGGAGGCCACCCAGACTTTGCCCGGCGAGGACGCGCTTCCCCCTAGGCCCGGGGTCTACGGCGTCTTCGACCCC
GCCGGGGACCTGCAGTTTCTCGGGATCTCGCGCAACGTCAGGGCCAGCGTCGAGGGGCACCGCAGAAAGGTGCCCGCTGA
CCTCTGCGCCTCCGTCAAGGTATACACAATTACGCATCTCCCATTCTGTAGGATTTCATTTACATCATGGAACTGGATTG
CGCAAAGGGT-------------------------------------GTCCTGTAGTGTTTGATGATGAAGGCTACTGAA
GTGATCATGGTTTCTTCTCAACAAGTTTACCTTAAGGGTTGGTTGCTATACACAAATATGTTGGCTGTCCCACGGTCTTG
CTATACACTTCTGCAAATGATTGCCCTGTCCCACGGTCTTGCTATACACA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTTA
ATCACTAATGACTACGTATCAACTCCCAGTTATCTCTCTAC-------------------------------CAGTCGAC
TGAGATTTAAGCAAGTCTCAGTCAAGTGACATAACATGCAAAAGAGAAAAAGAAAAAACTGAAAAGAAAATTTTGCACGA
ATCTTAATGTAAGATCTCACAGATATAGCATCGACTGAGACTTTGTTAAGTTTCAGTCGACTGAGACTTAGCAAGACTGT
TTGACATACTACTTGAGGATTTGATCACACCTATTTCTACAGGTTGCAATACCAGACGAGGAAACACCAGATAAAAGTGT
CCTGACTAATGCCTGGAAATCATGGATGGAAGAATACATAGCAGCCACTGGCAAGGCACCACCAGGGAACGTTGCCGGGA
ACCACACCTGGATCGGTCCTCCACAGAGACCTGCAGATTTGCGTTTGACTCCTGGTCGCCATGTTCAGCTAACTGTGCCA
CTTGAACAGTTGATTGATCGGTTAGTGAAGGAAAATAAAGTGGTTGCCTTCATCAAAGGATCAAGAAGTGCTCCCCAGTG
TGGGTTCTCGCAAAGAGTGGTGGGGATCCTGGAGGCACATGGAGTGGATTTTGCATCCGTAGATATTCTTGATGAGGAGC
ACAACCATGGGTTGAGAGAGACCCTCAAGACCTACAGCAACTGGCCAACCTTCCCACAGGTTTTTGTTGGAGGAGAACTT
GTGGGCGGATGTGATATTATTTCATCCATGGCTGAAAAGGGGGAGCTTGCTGCCCTATTTCAGAAATAGCACTCTCACCT
TGGAGTTTAAGTAATGTCTTGTTTTATCAGGTGCAAAATGTGACCTTATCTCTTGTACTGTTGCAATAATGCTTAGCTTA
TTGTAAGGCACAAAGTTCTTGGCTCAGAAACACGTTGATTCAATTTAGATGAGGCAGCGTTGTACTGTGAAACTTGCTGG
TTGTTTTTGAGAGAGGGCTTAGCAAAGGTGGCTGTGTGTATTTTTGTGGTCGTTTCACATCTTGCACATGAATACATTGT
AGCTACATGAGAAAGTATGTGATGCATGAAGTGAGAAAATCGTTGGATTGAGTTCTAAGGTTCAACTCAGAAAAGTAAAA
TTGTGAATGAAACTTGGAATATTTTTCTAGGTTCACTTTACAACTAGCTGATAACTGAGATGTTTCCTGTTGCCTCAGTA
CTTCCTTTATTTTTCTTCTTTCAAATTAGAAGAAAACAAAGCTATTTGCACTTCAAGTGTCAGTTGATTTATTGTCACTG
TGCTCAAGAGTGTTCACCATGTTACCGAAGTGTTTGGATCTGTACAATGAGGAGTCAAGAGAGTAG-CCTTGTAGATTTC
TGGAACAGATTTATTTTCTGTTAATGAACTTTACTATTGGAATAAGTAACAGAAGAGAAGCAGCAAGCTTTCCTGTACCA
TATGTTGGCTGGTTATCTGTATAACTCTACCAGAAGCAAATATAGCAGGTAAGCTCAACACTTGATGCAGATTATCTGAA
TATTAAAGAGAAGATATGGCAATCAATCTTTACTAGTTTAGGGAAGTTTCTACTGGAGGCAAGATATCTTCCAAGCATGA
TTTATTCAATTAATTCCAGAATCAGGGTAAGCAATGACTCAACCTGTATCTTTTTGATTCAGTTCTGAGCACTCCTGTTT
TAACTTAAATCAGAATGGGTTCTCTACTGTTGCATTTTTGCCTTACTTTCTGCCATTACTAAAGAGTGTTTTTT-CCTCC
AGCAGAAGCCATCATAAATTTGCTGGGCCTT
>chr5A_1
CAAAGAGCACCTATTTGAGGCTTTTTATGAT-------GGTGCGTCAAATAGTTAGGATTTTTCTCGCGAGAAAATAGTT
AGGATTGGGACCTCCTATTCCCCGCCTTCAACGCCGAGCTGTCGTTATAACAGGCACACACGCTCACTCTACACCCTTTG
ACCACTATTTTTTTAGGATGGCGCTGGCTCATCTAAAAAGCAGCTGCTGGTGACTCAGTAAAAAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TTATAT
TGAGAAAAAATC-TATAACAACTTACAAAATTGAAATAAAAGACTAAAAGTGTATTTCAAGAATGTTCATCATGTATCTA
AAAAATGTTTATCATGTGTTAAAAAAGTACAATGCATACTGAAAAACCATCGTTTTTTGTTCAAGAAGTGTTGTGTACAT
AGTAGAAAATTGAATGAAAATTTAAAAATAATGGCTAATTATAAGATGTTCTAACCTTTTTATGAATCGGATGTTTGTAG
ATGCGTTTTAGTGTGTTTGTTCACTCATTTTAATCTGTATATAGTTTATATTAAAATATCCAAACATCTTA-AATTGGTA
TGGAAGGAATAATAATGACCTGAAAAAATATAAGGGAAAAGAAGACAGAAATAAATTAAAAAAAT--------AAACCGG
CAAATGGGGCTGGCCCAGAGCAATTACGGAAAAAATACTAGTAACATTTTGCGTATAGGAGCAACTAGTCTAATTTGTTA
AAAAGTTGGGCTTTTCTCCGCGATTAGGCCGTGGGCCATGTGCCATCCAGCCCAATTCGAGAAGAAGAAGGCGCGGCTGG
ACATCATCGTCTCCACACACCTCCACCTCACC-TTCTCCGACTCAGCCGCGCTACCATGACTTTCCCCATGGCCACCTCC
ACCGCCTCCACGGCCGCCGCCGCTTCCATCCGCCTTCTCCCGGTGCCAGCCACCCCATCCTCCCGCACTCTCCGCTTCCC
GCCCATCCTCCGCCGCGCGCCCCGCGCCCTCTTGTCCGTCTCCGCTCTCAGCAAGCTCTCCGAGGCGTCCCCCGTCCCCA
TCCCGCAGGAGCCCACCCAGACTTTGCCCGGCGAGGACGCGCTTCCCCCTAGGCCCGGGGTCTACGGCGTCTTCGACCCC
GCCGGGGACCTGCAGTTTCTCGGGATCTCGCGCAACGTCAGGGCCAGCATCGAGGGGCACCGCAGAAAGGTGCCCGCTGA
CCTCTGCGCCTCCGTCAAGGTATACACAATTGCGCATCACCCATTCTGTAGGATTTTAGCTACATCATGGAATTGGATTG
CGCAAAGGGTCCTATGAATTGAATCATGATAATTGATTGCTTGCCTCGTCCTATATTGTTTGATGATGAATGCTTCTGAA
GTGATCATGGTTTCTTCTCAACCAGTTAA-CTTAAGGGTTGGTTGCTATACAAAAATATATGCGCTCCTACACCCATTTT
GAT--CACTTCTGCAAATGATTGTCCTGTCCCGTGGTCTTGCTATACACACTTAGGGCGTGTTTGTTTGAGCCGCAACTT
CTCTGGCTGCAGCATGTAACGACTCCGGCTGGAAGAAGCAGCTGTACCTGCTAGGTGTGGCTGGAAGGTTCGAGCTGAGG
TGCAGTCATTTGGTAGTTATACTATAGCAGCTGCGGCTGGTGCAGAGACGCGTTGAAATGACCAGAGTGCCCTCTATTGG
TCTGTACATTGGGTTTAAGTGCTGACTGTATTACTATAACTGTAAACGATCTGATTAAGAGCTATTTTTGCACAAATGGC
CAAAATGAGGCACAGTTGTCTGGTAGTTGTGTTCATCTTTGTACATACAAATAAAAATAACAAATACTCCAGTTTTTTTA
GAGAATAAAATAACAAGTACTCCCTCCGTAAACTAATATAAGAGCATTTAGAACACTAAAGTAGTGATCTAAACGCTCTT
ATATTAGTTTACAGAGGGAGTACTTAATATCACATACCATCAATTAATCAATAGACACAATCTTCGGTGATACATTTTTT
GACGAAAGTTGGAGAGTTCGCACGCTGTATTAACTCAGTATGTATCAACTCTCAGTTATCTCTCTTAAACAAACACACTC
TTAGGCCCCCTTTGTTTGGGCTACAGATTCCTGATAATCACTATGGCTGTGGATTCCTGAGAATCAGTTGTAGCTATGGA
TTCCTGAGAATCAGAAACTGGTTGTTTGTTTACCCTGCTGTTGGATAGTTGTAGGAATTGTAGGGGTTATGAAATGTCAG
TAATGTCCCTGGATGCCGAGTATGACGTTTATATGCTGATTTGGTGCAAATTAAGTACTATTTTTATTTTAGACTGAAAT
GACATGTATGTATACTAGTTTTGGTTGGTTTTGTTAGGCCACTAGAAACTAGTCATTGCATTCTTTTGGATGCGCTGGTC
TGCAGCTAACAAGGATCAGAGCCAATACTAGTTCCTCAAAACAAGATACGGCTTGTTTGTACATTACTGACCAACACGAG
TGCTGCCAGGAAACTGACAAAATACAGCAATTTTTCTCTTGTGGACAATCTGGTTTCAGCTTCAGTTCATACAGCACGGC
TTCTAGCTGACCAACACGAGCGCTGCCAGGAAACTGTTAGCAGTCCATGGCGGCCACCGCCACCTGACCAACATGAGTGT
CGTTGAGGGAGAGGCCGAGGCAAAGGATGGGGGCGGGGCCACGCGCGCGGAGCCTGCGGTACTCCCTTGCGCCTCCGCCA
CCGTGCTCCGCTTGATCCTCCAGCCTCAGCAGGCGCGCCTCCTCCGTTGACGTTGTCGTCGTCGCGGTCACCATGGGGAG
GGAGACGAGACGATGGGGTTTTGGCGTGGTTGACCTGGCCTGCGGGGTGGATACTAGATGAGGTTGCGGTGGCAGTTTTA
TTGTAATTTCAACTGGAAATAGGGGCAAGGGCACAAAATGAATCGTTTTGTTTTGTGGGAATCTGTAGAATCGGCTGAAT
CACCAAAATCGCTGCTTCCGGATTCCCTTCGCTGGTAGTTCATTTTTGGAATCAAATTCTAGGAAGCTATACGGGAATCC
CACGTATTTGTTTGAGCTTCTGATTTTAGAAGCCTAGAATCTGAGAATCAGAAGCTGTAGCCCAAACAAAGGCCACCTTA
ATCACTAATGACTCTGTATCAACTCTTAGTTATCGCTCTTCACGTTTTGAC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CATGCTACTTGAGGATTTGATTGCACCTATTTCTACAGGTTGCAATACCAGACGAGGAAACGCCAGATAAAAGTGT
CCTAACTAATGCCTGGAAATCATGGATGGAAGAATACATAGCAGCCACCGGCAAGGCGCCACCAGGGAACGTTGCCGGGA
ACCACACCTGGATCGGTCCTCCACAGAGACCTGCAGACCTGCGTTTGACTCCTGGTCGCCATGTGCAGCTAACTGTGCCG
CTTGAACAGTTGATTGATCGGTTAGTGAAGGAGAATAAAGTGGTTGCCTTCATCAAAGGATCAAGAAGCGCTCCCCAGTG
TGGGTTCTCACAAAGAGTGGTGGGGATCCTGGAGGCACATGGAGTGGACTTTGCATCCGTAGATATTCTTGACGAGGAGC
ACAACCATGGGTTGAGAGAGACCCTCAAGACCTACAGCAACTGGCCAACCTTCCCACAAGTTTTTGTTGGAGGAGAACTT
GTGGGCGGATGTGATATTATTTCATCCATGGCTGAAAAGGGGGAGCTTGCTGCCCTATTTCAGAAATAGCACTCTCACCT
TGGAGTTTAAGTAATGTCTTGTTTTATCAGGTGCAAAATGTGACCTTATCTCTTGTACTGTTGCAATAATGCTTAGCTTA
TTGTATGGCACAAAGTTCTTGGCTCAGAAACACGTTGATTCAATTTAGATGAGGCAGTATTGTACTGTGAAACTTACTGG
TTGTTTTTGAGAGCGGGCTTAGCAAAGGTGGCTGTGTGTATTTTTTTGGTCATTTCACATCTTGCACATGAATACATTGT
AGCTACATGAGAAAGTATGTGGTGCA--AAGTGAGAAAATCGCTGGATTGAGTTCTAAGGTTCAACTCAGAAAATTAAAA
TTATGATTGAAACTTGGAACATTTTTCTAGGTTCACAATGTC--------------------------------------
--------------------------------------------------------------------------------
-----------------------ACCGAAGTGTTTGGATCTGTACAATGAGGAGTCAAGAGAGTAATCCTTGTAGGTTTC
TGGAACAGATTGATTTTCTGTTAATGAGCTTTACTATTGGAATAAGTAACAGAAAAGAAGCACTAAGCTTTCCTGTACCA
TATGTTGGCTGGTTATCTGTATAACTCTACCAGAAGCAAATATAACAGGTAAGCTCAACACTTGATGCAGATTATCTGAA
TATTAAAGAGAAGATGTATCAATCAATCTTTACTAGTTTAGGAAAGTTTCTACTGGAGGCAAGATATCTTCCAAGCATGA
TTTATTCAATTAATTCCAGGATCAGGGTAAGCAATGACTCAACCTGTTTCTTCTTGATTCAGTTTTGAGCACTCCTGTTT
TAACTTAAATCAGAATGGGTTCTCTACTATTGCCATTTTGCCTTACTTTCTG-CATTACTAAAGAATGTTTTTTGTCTCC
AGCAGAAGCCATCATAAATTTGCTGGGCCTT
>chr5B_391
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AATTATAT
TGAGAAAATGTTTTATAACAACTTACAAAATTGAAATAAAAGACTAAAAGTGTATTTCAAGAATGTTCATTGTGTATCTA
AAAAATGTTTATCATGTGTTAAAG--GTACAATGTATACTGAAAAACCGTCATTTTTCCTTCAAGAAGTGTTGTGTACAC
AGTAGAAAATCGAATGAAAATTTTAAAATAATGGCTAATTATAAGATGTTCTATACTTTTTATGAATCGGATGTTTATAG
ACGCGCTTTAGTGTGTTTGTTCACTCATTTTAGTCTGTATGTAATTCATATTGAAATATCCAAACATCTTATAATTGGTA
CGGAAGGGAT-ATAATGACCTGAAAAAATAAAAGGGAAAATAAGACAAAAAATG------------------AAAACCGG
CGAATGAAGCTGGCCCAGAGTATTTACCGAGAAAAAAAA--TAACATTTTGCGTATAGGAGCAAGTAGTTCAATTTGTTG
AAAAGTTGGGCTTTTCTCAACGATTAGGCCGTCGGCCGTGTGTCATCCAGCCCAGTTCGAGAAGAAGAACACGCGGCTGG
ACATCATCGTCTCCACACACCTCCACCTCACCTTTCTCCGGCTCAACCGCGCTACCATGACTTTCCCCATGGCCACCTCC
ACCGCCTCCACGGCCGCCGCCGCTTCCCTCCGCCTCCTCCCGGTGCCAGCCACCCCATCCTCCAGCACTCTCCGCTTCGC
GCCCATCCTCCGCCGCGCGCCCCGCGCCCTCTTGTCCGTCTCCGCCCTCAGCAAGCTCTCCGAGGCGTCCCCCGTCCCCA
TCCCGCAGGAGCCCACCCAGACTTTGCCCGACGAGGACGCGCTTCCCCCTAGGCCCGGGGTCTACGGAGTCTTCGACCCC
GCCGGGGACCTGCAGTTTCTCGGGATCTCGCGCAACGTCAGGGCCAGCGTCGAGGGGCACCGCAGAAAGGTGCCCGCTGA
CCTCTGCGCCTCCGTCAAGGTATACACAGTTACGCATCTCCCATTCAGTAGGATTTCATTTACATCATGGAACTGGATTG
CGCAAAGGGT-------------------------------------GTCCTGTAGTGTTTGATGATGAAGGCTTCTGAA
GTGATCATGGTTTCTTCTCAACAAGTTTACCTTAAGGGTTGATTGCTA-------------------TCCCACGGTCTTG
CTATACACTTCTGCAAATGATTGCCCTGTCCCACGGTCTTGCTATACACA------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CTTA
ATCACTAATGACTACGTATCAACTCCCAGTTATCTCTCTACACGTTTTGACATTGAGGGTGTGGCTAGGTCTCAGTCGAC
TG------------------------------------------AGAAAAAGAAAAAACTGAAAAGAAAATTTTGCACGA
ATCTTAATGTAAGATCTCACAGATATAGCATCGACTGAGACTTTATTAAGTTTCAATCGACTGAGACTTAGCAAGACTGT
TTGACATACTACTTGAGGATTTGATAACACTTATTTCTACAGGTTGCAATACCAGACGAGGAAACACCAGATAAAAGTGT
CCTGACTAATGCCTGGAAATCATGGATGGAAGAATACATAGCAGCCACTGGCAAGGCGCCACCAGGGAATGTTGCCGGGA
ACCACACCTGGATCGGTCCTCCACAGAGACCTGCAGATTTGCGTTTGACTCCTGGTCGCCATGTTCAGCTAACTGTGCCA
CTTGAACAGTTGATTGATCGGTTAGTGAAGGAAAATAAAGTGGTTGCCTTCATCAAAGGATCAAGAAGTGCTCCCCAGTG
TGGGTTCTCGCAAAGAGTGGTGGGGATCCTGGAGGCACATGGAGTGGATTTTGCATCCGTAGATATTCTTGATGAGGAGC
ACAACCATGGGTTGAGAGAGACCCTCAAGACCTACAGCAACTGGCCAACCTTCCCACAGGTTTTTGTTGGAGGAGAACTT
GTGGGCGGATGTGATATTATTTCATCCATGGCTGAAAAGGGGGAGCTTGCTGCCCTATTTCAGAAATAGCACTCTCACCT
TGGAGTTTAAGTAATGTTTTGTTTTATCAGGTGCAAAATGTGACCTTATCTCTTGTACTGTTGCAATAATGCTTAACTTA
TTGTAAGGCACAAAGTTCTTGGCTCAGAAACACGTTGATTCAATTTAGAAGAGGTGGCATTGTACTGTGAAACTTGCTGG
TTGTTTTTGAGAGAGGGCTTAGCAAAGGTGGCTGTGTGTATTTTTGTGGTCGTTTCACATCTTGCACATG-ATACATTGT
AGCTACATGAGAAAGTATGTGGTACATGAAGTGAGAAAATCGCTGGATTGAGTTCTAAGGTTCAACTCAGAAAAGTAAAA
TTATGATTGAAACTTGGAATATTTTTCTAGGTTCACTTCACAACTAGCTGATAACTGAGATGTTTCCTGTTGCCTCAGCA
CTTCCTTTATTTTTCTTCTTTCAAATTAGAAGAAAATAAAGCTATTTGCACTTCAAGTGTCAGTTGATTTATTGTCACTG
TGCTCAAGAGTGTTCACAATGTTACCGAAGTGTTTGGATCTGTACAATGAGGAGTCAAGAGAGTAGTCTTTGTAGATTTC
TGGAACAGATTGATTTTCTGTTAATGAACTTTACTATTGGAATAAGTAACAGAAGAGAAGCAGCAAGCTTTCCTGTACCA
TATGTTGGCTGGTTATCTGTATAACTCTACCAGAAGCAAATATAGCAGGTAAGCTCAACACTTGATGCAGATTATCTGAA
TATTAAAGAGAAGATATGTCAATCAATCTTTACTAGTTCAGGAAAGTTTCTACTGGAGGCAAGATATCTTCCAAGCATGA
TTTATTCAATTAATTCCAGAATCAGGGTAAGCAATGACTCAACCTGTATCTTCTTGATTCAGTTCTGAGCACTCCTGTTT
TAACTTAAATCAGAATGGGTTCTCTATTGTTGCATTTTTGCTTTACTTTCTGCCATTACTAAAGAGTGTTTTTT-TCTCC
AGCAGAAGCCATCATAAATTTGCTGGGCCTT
>SNPs
-------------------------------SSSSSSS--------------S----------S-SS------------S
---------------S-------------SS-------S--S-----------------------S--------------
--------S----SSSSSS-SSSSSS-----------------S--S-----S-----------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-
--------------S----------S-----S--------------------S--------------SS-----------
----------------------------------------S----S-------------------------S--------
S--------S-S------S-------------------------------S-----------S-----S-----------
-S------S-S----------------------------------S------------------------------S---
----------------------S--------------------------------SSSS----SSSSSSSSS--------
----------------------------SS--------------------------S-----------------------
-----------------------------S-----------------S--------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------S---------------------------------S------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------------------------------------------------S------S-SS---S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
--------------------------------------------S----------S------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------------------S--------------------S-------------------------------------
--S---S-----------------------------------------------------------------------S-
------------------------------------S-------------------------------------------
-----------------S--------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------------------S-------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------------------------------------S----
-------------------------------
>forward_307
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TGGGATGTTGACCACTGCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------
>reverse_1587
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTCCCACGGTCTTG
CTATACA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_309
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGATGTTGACCACTGCTCCA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>reverse_3658
--------------------------------------------------------------------------------
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---------------------------------------------------------ACCACCAGGGAACGTTGC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_332
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TATGGGCC
GGGCAAAATACA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>reverse_4219
--------------------------------------------------------------------------------
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----------------------------------------------------------GTTGTACTGTGAAACTTGCTGG
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
