>input_sequence_53589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATGGTTACTTCTGCAAACTATTTTGTTAATGTTCTCTTCAGTTTGTTGATGTTTTT---TATA
TTAATGTAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCTAGGAAGAGGGTTGCAGACAAACAAAT
CAATAAGGATCACCCCGAGCCTGATGATGACTCATCGGAACAAGAGACGGGAACATTTAAGAAAGCTAGTGAAGAAGTGA
TGGCAACCCGGAAGATTGTAAAGGTTCGGCGTCAGCAGCCATCAGCAGCTGCTTCTTCAAATCCTTTCTCTGCAATTAGA
TTCACGCCCAGTGATTCCATTGCTCAAGCAAGTATCATAGTCTCAGAGCCTCCACCTTCTGATGTTAGCAATGGCA----
------------------------AGTCCAGTGCCTTAACTGAAGCACCCTCTCAACTTGTTGAGTCAGATGGCAAGATA
GAAGTTACAGTGGATGGAACTGGTGATGACAAAGTGGTTGTTGAAGAACCCAAGGAAGATAACAGCAAGACATCTGAAAT
CGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGCTGCAGGTGAAGATAAAGTTAGCAAGG
ATGATGATGAGAAAAATGGTGAAGCTGAATCGGGAACCAAGGATGGATCATCTGAGCAGAAGGATGCTGATAACAAAGGG
CAGTCATCATCGCCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAAAATGCTTTCACAGGACTGGCTGGAAC
TGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAATGCTCCCCTATTTGGGCTAAAGAGTG
ATGGCTCATCATTCCCTTCTTTCAACATTGGTGCTACCAACAAT---GGGAGTTCTGCCCCATCACTCGCCACTGCAGCA
GACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACCGGCGAAGAGAACGAGAAGGCTGTATTCACTGCTGA
CTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAGGGGTGAACTGAAGCTGAACATCCCGGTATCTG
GCGGTGAGAGATCTCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTCATTCTGAATGCAAGCCTTTATGATGACATG
ACACTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATCGGCGAATCACCGAGCGGGCTCACCAC
ATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGTGGAGACGCACAAGGCGAAGAAGGCTT
CGGACACG---CCAAAGACTCATGAGGGCTCCCCGAAGGCGCCCGACGTTTGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr1A_1_TraesCS1A01G224800
TATCTGCGAATAAAACATTCAAACTATGCTATAA--TGAGCTCCAGCTTTGGTGCTTTCCCTTCTATATCAATAAGATGT
ACTGTAACTTGTCC-----ACCTACCTATGTCGCTTGGCTAATGTCCAGTATTATAGTTTTGTTTGTTATGTCA--ATTA
TCCAATACAGAAAAAAAACTTAGACAAATTTAGCTTAGTGTTTTCTATTC----------------ACATAAGTTTGCCA
TTTTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTATTGCCATGTCAATCAAGTTT------------
-----GC--------ACTGCAGCTTGGCTGCCATTAGGAGTTTTCCTCTACATCAGTATATTTGGGTAGGCTAGATTTTT
ATTTGTACTCTGATTGAATATTTGTCGTTGTTGTATACTCCCTCCATTCCTAAATATAAGTCCTTTTAGAGATTTCAATA
TGGACTATATACGGATGTATATAGACATATTTTAGAGTATAGATTCACTCATTTTGCTCCGAATGTAGTCTCTATTGTAA
TATTTAAAAAGACTTATATTTAGGAACAGAGGGAATATAAATTATTCTGCTTTAGCTGCCAAAGAGCACCTATATGGCTA
TGTCTTTAAGCATAATGTTGCACACATGACATGTGCAAGACAG-GGGAGTTGTCTGACTGACAGATACTGGGAACACATG
GCTTGTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCCAGCATCGTGTCACATGAAAAGATTTG
TTCCCCACT-TGTGCCAACCCAGAAATTACCATTTGACATATTGTTATTGGCAACATAGTTTTCCTTCACAAATCTTGTT
TAGTCTTTAGTTACAGAGATGCTGGGTGAAGTCGGGAAAGTATTCATGTTTAGTTCT-----CTTTCAACTTTTTAGTTT
GCTTTATGGTTTATTCTGTAGGTGGGTTGGAGCAATACAAAAAGAAGGAATCTGCATAATCAAAATCCTTTAAAACTGTG
CTGATCTCTGATGTTGCATGGTTACTTCTGCAAACTATTTTGTTAATGTTCTCTTCAGTTTGTTGATGTTTTT---TATA
TTAATGTAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCTAGGAAGAGGGTTGCAGACAAACAAAT
CAATAAGGATCACCCCGAGCCTGATGATGACTCATCGGAACAAGAGACGGGAACATTTAAGAAAGCTAGTGAAGAAGTGA
TGGCAACCCGGAAGATTGTAAAGGTTCGGCGTCAGCAGCCATCAGCAGCTGCTTCTTCAAATCCTTTCTCTGCAATTAGA
TTCACGCCCAGTGATTCCATTGCTCAAGCAAGTATCATAGTCTCAGAGCCTCCACCTTCTGATGTTAGCAATGGCA----
------------------------AGTCCAGTGCCTTAACTGAAGCACCCTCTCAACTTGTTGAGTCAGATGGCAAGATA
GAAGTTACAGTGGATGGAACTGGTGATGACAAAGTGGTTGTTGAAGAACCCAAGGAAGATAACAGCAAGACATCTGAAAT
CGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGCTGCAGGTGAAGATAAAGTTAGCAAGG
ATGATGATGAGAAAAATGGTGAAGCTGAATCGGGAACCAAGGATGGATCATCTGAGCAGAAGGATGCTGATAACAAAGGG
CAGTCATCATCGCCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAAAATGCTTTCACAGGACTGGCTGGAAC
TGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAATGCTCCCCTATTTGGGCTAAAGAGTG
ATGGCTCATCATTCCCTTCTTTCAACATTGGTGCTACCAACAAT---GGGAGTTCTGCCCCATCACTCGCCACTGCAGCA
GACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACCGGCGAAGAGAACGAGAAGGCTGTATTCACTGCTGA
CTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAGGGGTGAACTGAAGCTGAACATCCCGGTATCTG
GCGGTGAGAGATCTCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTCATTCTGAATGCAAGCCTTTATGATGACATG
ACACTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATCGGCGAATCACCGAGCGGGCTCACCAC
ATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGTGGAGACGCACAAGGCGAAGAAGGCTT
CGGACACG---CCAAAGACTCATGAGGGCTCCCCGAAGGCGCCCGACGTTTGAAACCC-ACCCCGGTGTTCCGTGTTT--
-TGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCTTCCCGGAGTCGTC--AAGTTAAAACATATCGTAC
CCATGTCATATGGTTTCTGGCGTGTCCTGTCGCTGGTCTGGAACGGTGGGTGGTCTGTTGAACTTTAATTAAAGTCATAA
ATCTTGGTAAACTGGAGAAATGGGTCTCGTTTCGGGC--TATGCTTCTTCTGCTATGCGATGTGTATTATATTCAGTAGT
AATGTATTTGAGCGAGTCTGTCACCAAGTCACTGTTTTATGCATGTTCGTCG-----TTTGCACATGTTTTTTCACCGGT
TGCTGCATTTCGCAGCTCTTCTACTTC------------------------AGAATAGATGGACTATGCCGCTGGATGGC
TTGTCTGTATTGTGAATTCATTCTCTTGGGGAGGTTTTACCATTTAGTGTCCACAACAGTGCCATCATGC-ACTAGTTTT
ACATTGACACACTTCAGGTTCTTTTGAACTTGCAACATGAGTTTTTGTTTGTTTTACAAATATTTGTGAAAAGTG-TTTT
TACCAGGTCGAGCATCTGCACACTCTTTATCAAGCGCGGGCTGAGCCTGTTTGAACTTGGGCGTGTCTCTAGAACCCTTT
TGATCCAATTCTTTTTATGTGGTATTGAACCTGTTTGGTTTACAGGACTAGAATCCTTGGAAAATTCTCACGTGGGTCGC
TTTCGTACTCAGCTCAAAAGAATTTTCCTTTCCCATGGACCCCAAGCTTCAGGAAATGTTCTTTCATGTCTACGACAGCC
ATGCATGTTTTTAGACAGCTTGAATTATTTATTGCTAGTACGTTTGCAGTTCAGGCA------AA--AAGAAAAAACACG
CCATGGACGCTTTTCCTACTCCT----GGAATCC----TGCCAAGAGCCAATAAAACATTCTCTAGTGGAGCAGTAGTAC
TAAT-------------TTGCAAGTCATGACTGGACATCCTATCAATC----TTTTTCATTTTGGGATCACTCATCATTC
AAGTC
>chr1D_1
TATCTGCAAATAAAACATTCAAACTATGCTATATATTGAGCTCCAGCTTTGGTGCTTTCCCTTCTATATCAATAAGATCT
ACTGTAACTTGTCC-----ACCTACCTATGTCACTTGGCTAATGTCCAGTATTATAGTTTTGTTTGTTATGTCA--ATTA
TCCAATACAGAAAACAAACTTAGACAAATTTAGCTTAGTCACACAAGTTTGTTATGTCAGCATGTTACATAAGTTTGCCA
TTGTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTCTTGCCATGCCAATCAACTTT------------
-----GC--------ACTGCAGCTTGGCTGCCATTAGGAGTTTTCCTCTACATCAGTATATTTGGGTAGACTAGATTTTT
ATTTGTACTCTGATTGAATATTTGTGATTGTTGCTGTATAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AAATTATTCTGCTTTAGCTGCTAAATAGCACCTATATGGCTA
TATCTTTAAGCATAATGTTGCACACATGACATATGCGAGACAGCGGGAGTTGTCTGACTGACATATAATGGGGACGCATG
GCTTCTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCCAACACTGCGTCACAGGAAAATATTTG
TTTCCCACGCGGCGCCAACCCAGAAATTACCGTTTGACATGTTGTTATGGGCAACATAGTTTTCCTTCACAACTCTTGTT
TAGTCTTTAGTTACAGAGATGCCGAGTGAAGTCAAGAAAGTATTCATGTTAGCTTC-----CCTTTCAATTTTTTAGTTT
GCTTTATGGTTTATTCTGTATGTGGGTTGGTGCATTACAAAAAGAAGGAATC-------------------AAAACTGTG
CTAATCTCTGATGTTGCATGGTTACTTCTGCAAACTATTTTGTTAATTTTCTCTTCAGTTTGTTGATGTTTTTCATTATT
TTAATGTAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCTAGGAAGAGGGTTGCAGACAAACAAAT
CAACAAGGATCATCCTGAGCCTGATGATGACTCATCGGAACAAGAGACAGGAACATTTAAGAAAGCTAGTGAAGAAGTGA
TGGCAACCCGGAAGATTGTAAAGGTTCGGCGTCAGCAGCCATCAGCAGCTCCTTCTTCAAATCCTTTCTCTGCAATTAGA
TTCACCCCCAATGATTCCATTGCTCAAGCGAGTATCACAGTCTCAGAGCCTCCACCTTCTGATGTTAGCAATGGCA----
------------------------AGTCCAGTGCCCTAACTGAAGCACCCTCTCAACTTGTTGAGTCAGATGGCAAGGCA
GAAGTTACAGTGGATGGAACTGGTGAGGACAAAGTGGTTGTTGAAGAACTCAAGGAAGATAACAGCAAGACATCTGAAAT
TGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGCTGGAGGTGAAGATAAAGTTAGCAAGG
ATGATGATGAGAAGAATGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTGAGCAGAAGGACGCTGATAACAAAGGG
CAGTCATCATCGCCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAAAATGCTTTCACAGGACTGGCTGGAAC
TGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAATGCTCCCCTATTTGGGCTAAAGAGTG
ATGGCTCATCATTCCCTTCTTTCAACATTGGTGCTACCAACAAT---GGGAGTTCTGCCCCATCACTCGCCACTGCAGCA
GACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACCGGCGAAGAGAACGAGAAGGCTGTATTCACTGCTGA
CTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAGGGGTGAACTGAAGCTGAACATCCCGGTATCTG
GCGGTGAGAGATCTCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTCATTCTGAATGCAAGCCTTTACGACGACATG
ACGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATCGGCGAATCACCGAGTGGGCTCACCAC
ATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGTGGAGACGCACAAGGCGAAGAAGGCTT
CGGACACG---CCAAAGACTCCCGAGGGCTCCCCGAAGGCGTCCGACGTTTGAAACCC-ACCCCGGTGTTCCGTGTTT--
-TGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCATCCTGGAGTCTTATAAAGTTAAAACATATCGTAC
CCATGTCATATGGTTTCTGGCGTGTCCTGTTGCTGGTCTGGAACGGTGGGTGGTCTGTTGAACTTCAATTAAAGTCATAA
ATCTTGGTAAACTGGAGAAATGGGACTCGTTTCAGGCTATATGCTTCTTCTGCTATGCGATATGTAGTATATTCAGTA--
-ATGTATTTGAGTGAGTCA-TCACCACATCACTATTTTATGCATGTTAGTCGTCGCGTTTGCACATGTTTTTTCACCGGT
TGCTGCATTTCGCAGCTTTTCTACTTC------------------------AGAATAGGTGGACTATGGCGCTGGATGGC
ATGTCTGTACTGTGAATTCAGTCT--------GGTTTTACCATTTAGTGTCCACAACAGTGCCATCATGC-ACTAGTT--
---TTGACACACTTCATGTTATTTTGAAGTTGCAACATGAGTCTTTGTTTATATTGCAGATATTTGTAAAAAGTG-TTTT
TATGAGGTCGAGCATCTGCATACTC--TATCAAGCGCGGGCTGAGCTTGTTTTAACTTGGGTGTATCTGTAGAACCCTTT
TGATCCAATTCTTTTTCTGTGGTATTGAACTTGTTTGGTTTTAAGGATTAGAATCCTCGGAAAGTTTTCACGTGGGTCGC
TTTCGTACTCAACTCAAAAGAATTTTCCTTTCCCGTGGACCTCGAGCTTTTGGAAATGTTCTTTCATGTCTACGACGACC
ATGCATGTTTT-AGACAGCTTTGATTATTTATTGCTAGTACGTTTGCAGTTCGGGCAAAAAAGAA--AAAAAAAAACACG
CCATGGACGCTTTTCCTACTCTGGGAGGGAATCC----TGCCAAGAGCCAACCAAACATTCTCTAGTGGAGTT---GTAC
TAAT-------------TTGCAAGTCATGACTGGACATCCTATCAAACAATGTTTTTCGTTTTGGAATCACTTGATTCAA
GTC--
>chr1B_1
TATCTGCGAATAAAACATTCAAACTATGCTAT--ATTGAGCTCCAGCTTTGGTGCTTTCCCTTCTATACCAATACGATCT
ACGTCACTT------------------------------TAATGTCCAGTATTATAGTTTTGTTTGTATGTCCATTATTA
TCCAATACAGAAAACAAA--------------GCTTGGTGTGTTCTATTC----------------ACATAAGTTTGCCA
TTTTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTATTGCCATGCCAATCAAGTTT------------
-----GCACTGCACTACTGCAGCTTGGCTGCCATTAGGAATTTTCCTCTACATCAGTATATTTGGGTAAGCTAGATTTT-
ATTTGTTCTCTGATTGAATATTTGTCATTGTTGTTGCATAG---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AATCAATCTGCTTTAGCTGTTAAATAGTACCTATATGGCTA
TATCTTTAAGCATAATGTTGTACATGTGACATGTGAGGGACAGCGGGAGTTGTCTGACTGACATGTACTGGGGACGCATG
GCTTCTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCCAACACTGTGTCTCAGGAAAAGATTTG
TTTCGCATGCTGCGCCAACCCAGAAATTACCATTCGGCATGTTGTTATAGGCAACATAATTTTCCTTCACAAATCTTGTT
TAGTCTTTAGTTACAGAGATGCCGGGTGAAGTCGGGGAAGTATTCATGTTTGCTTCCCTTTCCTTTCAACTTTTTAGTTT
GCCTTATGGTTTATTCTGTAGTTGGGTTGGTGCAATACAAAAAGAAGGAATCTGCATAATCAAAGTCCTTTAAAACTATG
CTAATCTTTGATGTTGCATGGTTACTTCTTCAAACTATTTTTTTAT-GCTCTCTTCAGTTTGTTGATGTTTTT---TATT
TTAATGCAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCTAGGAAGAGGGTTGCAGACAAACAAAT
CAACAAGGATCATCCTGAGCCTGATGATGACTCATCGGAACAAGAGACAGGAACATTTAAGAAAGCTAGTGAAGAAGTGA
TGGCAACCCGGAAGATTGTAAAGGTTCGACGTCAGCAGCCATCAGCAGCTCCTTCTTCAAATCCTTTCTCTGCAATTAGA
TTCACCCCCAGTGATTCCATTGCTCAAGCAAGTATCACAGTCTCAGAGCCTCCACCTTCTGATGTTAGCAATGGCA----
------------------------AGTCCAGTGTCCTAACTGAAGCACCCTCTCAACTTGTTGAGTCAGACGGCAAGGCA
GAAGTTACAGTGGATGGAACTGGTGAGGACAAAGTGGTTGTTGAAGAACCCAAGGAAGATAACAGCAAGACATCTGAAAT
TGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGCTGGAGGTGAAGATAAAGTCAGCAAGG
ATGATGATGAGAAAAATGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTGAGCAGAAGGATGCTGATAACAAAGGG
CAGTCATCATCACCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAAAATGCTTTCACAGGACTGGCTGGAAC
TGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAATGCTCCCCTATTTGGGCTAAAGAGTG
ATGGCTCATCATTCCCTTCTTTCAACATGGGTGCTCCGAACAAT---GGGAGTTCTGCCCCATCACTCGCCACTGCAGCA
GACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACTGGCGAAGAGAATGAGAAGGCTGTATTCACTGCTGA
CTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAAGGGTGAACTGAAGCTGAACATCCCGGTATCTG
GCGGCGAGAGATCTCGGCTCGTCATGAGGGCGAAGGGCAACTACCGGCTCATTCTGAATGCAAGCCTTTACGACGACATG
ACGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATCGGGGAATCACCGAGTGGGCTCACCAC
ATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGTGGAGACACACAAGGCGAAGAAGGCTT
CGGACACG---CCAAAGACTCCTGAGGGCTCCCCGAAGGCGTCCGACGTTTGAAACCCCACCCCGGTGTTCCGCGTTT--
-TGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCTTCCTGGAGTCTTATAAAGTTAAAACATATCGTAC
CCATGTCATGTGGTTTCTGGCGTGTCCTGTGGCTGGTCTGGAACGGTGGGTGGTCTGTTGAACTTTAATTAAAGTCATAA
ATCTTGGTAAACTGGAGAAATGGGACTCGTTTCAGGCTAT--GCTTCTTCTGCTATGCGATATGTAGTATATTCAGTA--
-ATGTATTTTAGTGAGTCA-TCACCACATCACTGTCTTATGCATGTTCATCGTCGCGTTTGCACATGTTCATCTTTGTGT
TTGCACTAATGTAGTGTCAAAAACGTTTTTATATTATGGGACGGAGGGAGTAGAATAGACGGACTATGCCGTTGGATGGC
TTGTCTGTATTGTGAAGTCAATCTCTTGGGGAGGTTTTATCATTTAGTGTCCACAACAGTGCCATCTTGCCACTAGTTTT
ACGTGGACACACTTCAGGTTCTTTTGAACT-------TGAGTGTTTCTTTATTTTACAAATTTTTGTAAAAAGTGTTTTT
TATCCGGTCGAGCATCTGCACACTCTTTATCAAGTGCGGGCTGAGCTTGTTTGAACTTGGGTCTTG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ATTTATTGCTAGTACGTTTGCAGTTCAGGCAAAAAAGAACGAAAGAAAAACACG
GCATGGACGCTTTTCCTACTCTCGGAATCCTGCCAAAGTGCCAAGAGCTAGCAAAACATTCTCTAGTGGAGTA---GTAG
CACTAGTTATGCAAGGATTGCAAGTCATGACTGGACATCCTATCAAGCAATGTTTTTCGTTTTGGAATCA----------
-----
>chr6B_5
----TGCGAATAGAATATTCAAACTATGCTAT--ATTGAACTTCAGCTTTGTTATTTTCCCTTCTATATCAATAATATGT
ACCGTAATTTGTCACCGCAACCTACTTGCGTCACTTGCAAATGGCTTGTACTGTACTTTTTATTGGTTATTTCA--ATTA
TCCAGAACAGAAAACCAATTTAGAGAAATTTAGCTTAGTGTGCTCTATTC----------------ACATAAGTTTGCTA
TTTCACATAATTTGGCAATATGTACGTGCTTAA---TTTCATAACTACTTGCCATGCCACAAAAATGAAGAAACATTTTC
TGTCCGC--------ACTGCAGCTTGGCTGCCATTAGGAGTTCTCCTGTAGATCAGTATATTTGAATTC--------TT-
ATTTGTATTCTGATTAAATGGTTCACATTGTTTTTATATAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AAATTTAGCAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TAC-GTTCTCTTTAGTTTGTTCTAATTTAT---TTTC
ATGTAGA----AAATCTTGTAAGGATGGCGGACAAGAAACATGCTCAAACTTCTAGGAAGAGGGTTGCAGACAAACAAAT
CAACAAGGATCACCCTGAGCATAATGACAACTCATCGGAACAAGAGACATGAACATTTAAGAAAGCTTGTGAGGAGGTGA
TGGCGACCCGAGAGTTTGTAAAGGTTAAGAATTAGCAGCCGTCAACAGCTC---CTTCAAATCCTTTCTCTGCAATTATA
TTCAAGCCAAGTGATTCCACTGTTCAAGCAAGTATGGCAGTCTCAGAGCCTCCACCTTCTGATGTTAGCAATGGCAGTGG
GAAAGAGTCGGATGAAAAAAAACAAGTCCAGTGACATAACTGAAGCACCGTCT---------------------------
------------------------------------------GAACAACACAAGGAAGATAATAGCAAGATATCTGGAAT
CAAGGACAAACCAGAAGATGGAGATGCTGTAGAGAAG---GCAGTAGATGAAGCTGGAGGTGAAGGTAAAACCAGCAACG
ATGATGATGAGAAGAAAGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTGAGCAGAAGGATGCTGATAATAAAGGG
TAGTCATCATTGCCGACAGCTCTTTTCTCCTCAATGAATTTGTCAACTGGCCAAAATGCTTTTATGGGGCTGGCTGGAAC
TGGATTTTCAGGC------------------------TCTAAAGAAAGCTCAAATACTCCCCTGTTTGAGCTAAAGATTG
ATGGCTCATAATTCCCTTCTCTCAACATTGGTAGTACGAACAAT---GGGAGTTCTACCCCAGTACTCGCCACTGCAGCA
GAGGCACCACAGAAATTTGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr7D_1681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATCACCAACACCTCTGTTCTCTTTTATGAATGTGTCAAGTGGTCATAACGCCTTCACAGGACTGGCTGGAAC
TGGGTTTTCAGCCTCGTCATTTTCCTTTGGCTCAGCTTCTAAAGAAAGCACAAATGCTCCCCTATTTGGGCTAAAGAACG
ACAGCGCATCCTTCCCTTCTTTCAATATCGGTGGTACGAACAACAACGGGAGTTCTGTTCCATCGCTTGTCGCTGCAGCA
GAAGCACCAAAGAAATTCATCATGCCAGAGGGCCCAGTGGAGACAGGCGAAGAGAACGAGATGGCCGTGTTCACCGCGGA
CTCTGCAATGTACGAGTACCTCGACGGGGGCTGGAAAGAAAGAGGAAAAGGGGAGCTAAAGCTGAACATCCCAGTGTCCG
GCGGCGAGAGGTCCCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTGGTCCTGAACGCGAGCCTGTACGATGACATG
TCGCTGAAGGACATGGAGAAGAAGGGCGTGACGTTCGCCTGCATCAACAGCACCGGCGACTCGCCGGGCAGGCTCACCAC
GTTCGCCCTCAAGTTCAAGGACACTGGCGTCAGGGATGATTTCAAAGCCGCGGTGGAGGCGCACAAGGCGAAGAAGGCCT
CGGACGCGATGCCCAAGACGCCTGAGAGCTCCCCCAAGGTGTCTGATGACTGAAAGAGACCGCCCTGGTTGCGTGTTTCG
ATGATGTGTATG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr7A_1681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATCACCAACACCTCTGTTCTCTTTTATGAATGTGTCAAGTGGCCATAACGCCTTCACAGGACTGGCTGGAAC
TGGGTTTTCAGCCTCATCATTTTCCTTTGGCTCAGCTTCTAAAGAGAGCACAAATGCTCCCCTATTTGGGCTAAAGAGCG
ATGGTTCATCCTTCCCTTCTTTCAATATCGGTGGTACAAACAACAACGGGAGTTCTGTTCCATCGCTTGTTGCTGCAGCA
GAAGCACCAAAGAAATTCACCATGCCAGAGGGCCCAGTGGAGACAGGCGAAGAGAACGAGATGGCCGTGTTCACCGCAGA
CTCCGCAATGTACGAGTACCTCGATGGGGGCTGGAAAGAAAGAGGAAAAGGGGAGCTAAAGCTGAACGTCCCCGTGTCTG
GCGGCGAGAGGTCCCGGCTCGTTATGAGGGCCAAGGGTAACTACCGGCTGGTCCTGAACGCGAGCCTGTACGACGACATG
GCGCTGAAGGACATGGAGAAGAAGGGCGTGACGTTCGCCTGCGTCAACAGCACCGGGGACTCGCCGAGCGGGCTCACCAC
ATTCGCCCTCAAATTCAAGGACACTGGCATCAGGGATGATTTCAAAGCCGCGGTGGAGGCGCACAAGGCGAAGAAGGCCT
CGGACGCGATCCCCAAGACGCCCGAGTGCTCCCCCAAGG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>SNPs
---------------------------------S----------------------------------------------
--------------------------------S-----------------------------------------------
--------------S--------------------------S--------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------S-------SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S---S----------------
-S----------------------------------S--------------------------S--------S--S----
----S--------------------------------------------------S--SS--------S-----------
--S-----S---S---------------------------S-------S-------------------------------
----------------------S----------------------------SS---S-----------------------
------------------------------S---------------------------------S---------------
--S----------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---S-----------S--------------------------------S-------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------S------------------------------------------
-----------------------------------S-----------------------------------------SS-
--------------------------S-----------------------------------------------------
--------------------------------------------------------S-----------------------
------------------S------------S--S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-------------------S--------------------------------------
-------------------------------------------------S------S-S---------------------
------------------------------S-------------------------------------------------
------------------------S--------S---------------------------S----S-----------SS
S-----------S-----SS------SS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--S---------------------------------------S-------S----------------S------------
--S-------------------------------------------S--------------S--S---S-----------
----------------S-------------S----------SS----S---------S-----S--S-------------
-----------S----------------------S------S-S-----SS-------------------------SS--
-----------S---------SS----------------------------------------------S----------
---------------------SS----------------------------S-------------------S-SSS----
----------------------------------------------S-----------S------S------SSSSSSSS
SSSSS
>forward_779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGTCAGTACTGTGCCAGCAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_2665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCTCGTTTCGGGCTATGCTT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
