>input_sequence_53578
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-----------------------------------------------AT-------------------------------
--GGCGGCCAAGAACCCCAAGGTCTTCTTCGACATCCTCATCGGCCAGGCCAAGGCGGGCCGGGTCATCATGGAGCTCTA
CGCCGACAAGGTGCCCAAGACGGCGGCCAACTTCCGGCAGCTCTGCACGGGCGAGAAGGGCCTGGGCAAGAGCGGCAAGC
CGCTCCACTACAAGGGGTCGGCCTTCCACCGCATCATCCCGGGCTCCATGTGCCAGGGCGGCGACTTCACCCGCGGCAAC
GGCACCGGCGGCGAGTCGGTCTACGGCCAAAAGTTCGCCGACGAGAACTTCCTGCTCCGCCACACGGGCCCCGGGGTCCT
CTCCATGGCCAACGCCGGGCCCGGCACCAACGGCTCCCAGTTCTTCATCTGCACCGCCAAGACGCCGTGGCTCGACGGCA
AGCACGTCGTGTTCGGGCAGGTTGTCGATGGATACCGCGTCGTGGAGAAGATGGAGGCCGTCGGCTCGTCCGGTGGCGCC
ACCGCCGAGCCCGTCGTCATCGAGGACTGCGGCCAGCTCCCCGACGGCGAGTAACCAGTGCCTGGCTGATCTGATGATTC
ATTCAGCTTGTTTTTT------------TACTT--------ACTACTGAAGCTGAGACAGTTGATATGGATCC----GAT
GGACT-ACTAGTTTGTTTAGGCGTGTGTAA----------------------TGACTGAA----TGAATGAATAAATTTA
CAGATTCAGTTTCATCAATCTCTAAAGTTTTAGTGAGAGATTCTTTCTCTTGTTATGCCTAACCTGC-AAGATTTCACTA
TCCATGCTTAGTCTA----------------------------------------------GCTGCTTGAAGATGAGAA-
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--------------------------------------GAATAGACTAGAGATGGTCCCATCTTTTCTCTGGTTGAAAAA
TATGTTGACATGTTGACATGTTGAGTGGTTCAACATGTTGAAAAATATAGGAATCAGCAGCAGGATTACAAATTAT-G-T
TGACATGTTGAGTGGTTCAGGCATGAATTCAGT-----------------------------------------------
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---------TCACATTGACATGATCCAACATAAGATTAACTGGTTCTGATTCAACAGACTACTAAGACTAGAAGACCATG
GTATGAAGATTCTACTAGGAAA--TAGAATTAAAAATTATAAAT------GTCTGAATCTTGTTCAGGCTTGTTCATCGT
TTGCCTGAGAGA------------------------------AACTCTGTGGAACCAGCATCCCTGTTTCTATGCACGCC
CCGCCCCAAGGATGTAGATTGAATTGCCAAGTGATGCCATTGGATGACAAAAGGCTTGACACATTGATTATGCAGTAGCA
TAAGTTCTTTTATCAT---CGATTCTATGATAGTTTCAATCATACGCTAGAGCTACTATGATTGTTTCATTCATATGCTC
GAGCTAGCTAAATCTGAATATATTTCTTTCTGCTGTTGCTGTTTAATTTCGCCTGG-CAGGTTCAGTCGGAGGATGA---
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------------------
>chr4A_1_TraesCS4A01G312600
TGTGCACTTAGTCATCTATGTTCCCAGGCTGTTATGCATACTTGTTTGTCGCGTAACCACCATTATTAGTGGTGCTTTGC
TCGACACATAGAAGACAT---ATGCAGCTGTGTTCAGTTTATTTCAAAAATTATTAGTATTGTACTTAAAAAGTAAAATT
AGCATATAAGCACAAATTAAA-GGTGTTGCTTTCCAGAGTATATATATAGAAAGTTAAAG--------------------
-------CCCAGTCTGACATCCTACAAAGTAGCTAGAGCTAATTTCTTGTTAATGGAA----------------------
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--------------------------------------AATATTTGTTGTTAATTTAATTTCTTTTGAGACGAAAAGATT
A-------------------------------------------------------------------------------
--------------------------------------------TTAATTAATTTATAATTTTGGG--------------
-------CTCCCAGTGGAATGGGCCGCCATAATTGACACAGAACAGGGCTGTTAGTTGAGTCAGGTGCGGCTGAGA----
----------------TGAGATGGGCCGCTATTTATTGGTAGGTGCGTGCTCGAGCCACCTACCAATTAGAGCCCAGGCC
CATTAGAGC----------------CTGAAAACCCTAAACCCT-CCCCTTTTTATCTCCCCC-ATCCAGCCGCCGTTTTC
CCCATCT---------TCTTCCTCCTCCTCCTCCTCACAACTCAACTAGCATCACCACTGCTGGGGATTTTCTTCCTCCT
CCTCCTCCTGACAACTCAACTAGCATCACCACTGCTGGAAATCAAGAAAGGTAGGATTTTTCTTCTTATCTCGACTAGAT
TTCTCTCTATCCTCACAGCTGTGTTTGTTTCTTGTGACTCGATTTGGTTTTGGTTTTGGTTTCCTTGTCTCTGCACATAT
CGAAGGCTTTCTAGGCGTCATTATCCATAGGCCTCCTGAGCTCAATGTTTGTGCCAAATCAAATCTTACAATCTTCATGA
TCCTCGCCCTGTGACCTCCAGCAGTGCTACCCTGGAGGCCACGCAAGGACCATGACCACATT-----------------C
CCCAATTTGTTTTC----TTGAATTGTTGATTCGTTTTAACTCCAATACCTTGGAGGCAAATCTTAGATTCCCCAATTTG
ATTCCCCAGCAGAAAGAGT------------------------AGCCAT-------------------------------
--GGCGGCCAAGAACCCCAAGGTCTTCTTCGACATCCTCATCGGCCAGGCCAAGGCGGGCCGGGTCATCATGGAGCTCTA
CGCCGACAAGGTGCCCAAGACGGCGGCCAACTTCCGGCAGCTCTGCACGGGCGAGAAGGGCCTGGGCAAGAGCGGCAAGC
CGCTCCACTACAAGGGGTCGGCCTTCCACCGCATCATCCCGGGCTCCATGTGCCAGGGCGGCGACTTCACCCGCGGCAAC
GGCACCGGCGGCGAGTCGGTCTACGGCCAAAAGTTCGCCGACGAGAACTTCCTGCTCCGCCACACGGGCCCCGGGGTCCT
CTCCATGGCCAACGCCGGGCCCGGCACCAACGGCTCCCAGTTCTTCATCTGCACCGCCAAGACGCCGTGGCTCGACGGCA
AGCACGTCGTGTTCGGGCAGGTTGTCGATGGATACCGCGTCGTGGAGAAGATGGAGGCCGTCGGCTCGTCCGGTGGCGCC
ACCGCCGAGCCCGTCGTCATCGAGGACTGCGGCCAGCTCCCCGACGGCGAGTAACCAGTGCCTGGCTGATCTGATGATTC
ATTCAGCTTGTTTTTT------------TACTT--------ACTACTGAAGCTGAGACAGTTGATATGGATCC----GAT
GGACT-ACTAGTTTGTTTAGGCGTGTGTAA----------------------TGACTGAA----TGAATGAATAAATTTA
CAGATTCAGTTTCATCAATCTCTAAAGTTTTAGTGAGAGATTCTTTCTCTTGTTATGCCTAACCTGC-AAGATTTCACTA
TCCATGCTTAGTCTA----------------------------------------------GCTGCTTGAAGATGAGAA-
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--------------------------------------GAATAGACTAGAGATGGTCCCATCTTTTCTCTGGTTGAAAAA
TATGTTGACATGTTGACATGTTGAGTGGTTCAACATGTTGAAAAATATAGGAATCAGCAGCAGGATTACAAATTAT-G-T
TGACATGTTGAGTGGTTCAGGCATGAATTCAGT-----------------------------------------------
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---------TCACATTGACATGATCCAACATAAGATTAACTGGTTCTGATTCAACAGACTACTAAGACTAGAAGACCATG
GTATGAAGATTCTACTAGGAAA--TAGAATTAAAAATTATAAAT------GTCTGAATCTTGTTCAGGCTTGTTCATCGT
TTGCCTGAGAGA------------------------------AACTCTGTGGAACCAGCATCCCTGTTTCTATGCACGCC
CCGCCCCAAGGATGTAGATTGAATTGCCAAGTGATGCCATTGGATGACAAAAGGCTTGACACATTGATTATGCAGTAGCA
TAAGTTCTTTTATCAT---CGATTCTATGATAGTTTCAATCATACGCTAGAGCTACTATGATTGTTTCATTCATATGCTC
GAGCTAGCTAAATCTGAATATATTTCTTTCTGCTGTTGCTGTTTAATTTCGCCTGG-CAGGTTCAGTCGGAGGATGAAGA
TGAAG---------CGGGCGACTATGAAGAGGTGTTGTAGTGGAGGCCAGATGCAAGGATATGTATGTCCCTCTGTTGCT
GCTTATTCTCTTTTATCTATTCTTCTGAACTTCTTTTGGTATCAGAAG----TCCATAACGTTGTTGTTATCATGTCCAT
GGTGAATTGTGTTTTTTGGAGTATTTTCTTTCACAAGATTTGTGATTTTAGTTGGTCATAAGGACCAAAAAGGATAGGAA
TAGGGCATTATGAACCTGAATTGTCCATGAGAGACCTTAGCGACCAAGTGATGCTCTTACATAGTATGCAGTTAGAATCC
AGAAAATGTATTGAACAATCCATGGTCCCATGTTCGGCATTTCTTGGATAATGAACCAACAGTTCTGAATTCTGAAGCTG
CATTATTATTGTTCAGCTAGACTAAACAAAAAACATTCAGCTGTTAATTAATTATAAGCACAGCAAAGTTCTTATTTTAC
ATTTAAGCAGCCTCAGTTTCATAATCTTGACGGTTGGTTACAGTTTAGAGTTTACAT-CCAAATCTGGACAGGTGCTAGA
CGGAGGAAACAGCAGCAGCAGCATCACAGTAGAACAAGTGATGATGCCCAGTGTGCTCCAAATGCACAATTTTTTTTTAA
CAACAGATTAGCTGATGTCCGCCAGATATGCGAAGATTCTAATATTGTCGGCGGGCAGGAGGTCGCACAAAGAGCAAGCT
GGTCCATCACCGTTTGGACGTGAGTGAGTTTGCTCTCGGCGACGACAGAGGCGCGGGGACGGAGGTAGAGCCCGGCCTCC
GCAACAGCGGCGAT-----------------AGTGTAGGGGGACAAGCAGTAATTGGGACACCAAGTTGACAAGCAGTAA
CATCAGCTGGCTAG----------------------------TTGCTCTGTGTTTTGTCTCTGTTTGTGTG--TTCGTTT
CAGTTTTGCACATACTAGTGAAGCTGCTGCTGTTTATGTTGGTTTAGGATTCCATTTGGTATCGAATATGATGATATGAA
GTGAAGGTGTCCCTGACC
>chr4B_18
ATC-----------------TTCCCAGGCTGTTATGCATACTTGTTTGCCGCATAACCACCATACTGCA-----CTTTGT
TCGACACATAGAAGACAT---ATGCAGCTGTGTTCAGTTTATTTCAAAAATTAATGCTA--GTATTTAAAAAGTAGAATT
AGCATATAACCAC-----AAA-GGTGTTGCTTTCCAGAGTATATATAGAAAGGAAAAGCTGAAAGGGAG-----------
-----------------------------TAAAGTAGAACTAATGATGATGCGATGTTCTTAATGTCATTTCTCCCTTTT
GACTCTG--TATTGTTGGACTGATCTGGTTGCTGTGAGG---TAATATTATGTCAAAGAAGTACTAGCAGTGTTGGTTA-
-------------------------------------TTTTTGCTAAAGAAGAATGTGATGTTTGATTACAGGACTAAGT
TGGTAAATATGCTCGCAGCTGTTTTTTTGGGCACTGGACTGGAAGTTATTACAGTAATTGCTTTGCTGGTATTAAAATGC
AAGGAATCACATAAATGTGGGGAAGAAAACCTAGTGAAGTGGGATAGTAGGTTAGGTTGGTACAGAAAAAAAAAGTGGAG
GCAGCCTAACAGAGCTCAGCAGCGTGTGATCATTGTAAAGTACAGCAAGTGTTTTATGGTTTGTGTTGCCTTTGTTAATA
G-TGTCATCCATGC---TTATCGTATAGTATATGATTATAGCTTGCTAATGAATGATTAACACACGCTCAGTAGTGCCTT
TTCGATAAGGCAAAATGGACTGAATGTGGGAGTCCCAGCTGCTACTGAAGATGGATGCAGGTGT----------------
------------------TTTGTTGGTGCAAGTTGTTGGCTCATGTTGAGTTTCAAGCAGTCTGTCTGTATGTGCAAACC
TCTTGCGGCCAGGTGCACACATCCTTGATCTTGAATCCTTGTACATTACATGACTTTGTCAGATGAAGGAAAAAAAAGGC
ACTTGCATTTCATTCCACTTTACAAAATGTCCGCTTACCACATTTCTCAAAGTTGATGTGTAGGCGAATAATTATTTTTA
TTTTTATTTAATATTCCCTCTTAGTGATATAAACTCTCTTATATTTCTTTACGGAGGGAGTAATAAATAG----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTTTCATTCATTTTTCTCTCTTAATTTTTTTAAGGTTTCTCTCG------------------------------------
---------------------------------------------TAATTAATCTCTCACTTTTTTACATGGGCTCTCTC
TCTCTCTCTCTCAGTGGAATGGGCTGGGATACTTGACAACAACAAGGTGCGGGCTGAGAAGAAGAAGGGCCGCGGAG---
--------------------------------------------CCACCAGATAG----------------GCCCAGGCC
CGTTAGAGCCCATGGAGTGGGCGCTCTGAAAACCCTAAACCCTCCCCCTTTTTATCTCCCCCCACCCAGCCGCCGTTTCC
CATCCTCCTCCTTCGCTCTTCTTCTTCTCCTCCTCCTC------------------------------------------
----------------------------------------GTCAATCAAGGTAGGATTTTGTGCTTCGATTTGTCAAG--
----------------------GTTTCTTTCTTGTGATTGGATTTGGTTTTGGTTTTGTGTCTC--------GCACATAT
CGAAGGCTTTCTAGGCGTCATTATCCAAAGGCCTCCTGAGCTCAATGTTTGTGCCAAATCAAATCTATTT-TCTTCAT-A
TCCTCGCCCTGTGATCTCCAGCAGTGCTACCCTGGAGGCCACGCAAGGACCATGAACACATTTGTCCAATCGAACAATTC
CACAAATTTTTCTCTTCTTTCCTTTGTTGATTCGTTCTTTCTT-------TGACAAATCTCAAGAATTTTCCTTTTGTTG
GTAGATTTGATCTGACCGAGCGTATGTATGTATGTTTGATCCATTGATCCAGTAAAGAAAGCAGCAAGTAGAAATCCATG
GCGGCGGCCAAGAACCCCAAGGTCTTCTTCGACATCCTCATCGGCCAGGCCAAGGCGGGGCGGGTGGTCATGGAGCTCTA
CGCCGACAAGGTGCCCAGGACGGCGGCCAACTTCCGGCAGCTCTGCACGGGCGAGAAGGGCCTGGGCGCCAGCGGCAAGC
CGCTCCACTACAAGGGCTCGGCCTTCCACCGCATCATCCCGGGCTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAAC
GGCACCGGCGGCGAGTCGGTCTACGGCGCCAAGTTCGCCGACGAGAACTTCCTCCTCCGCCACACGGGCCCCGGCGTGCT
CTCCATGGCCAACGCAGGGCCCGGCACCAACGGCTCCCAGTTCTTCATCTGCACCGCCAAGACGCCCTGGCTCGACGGCA
AGCACGTCGTGTTCGGGCAGGTCGTGGACGGGTACGGCGTCGTGGAGAAGATGGAGGCCGTCGGGTCGTCCGGCGGCTCC
ACCGCCCAGCCCGTCGTCATCGAGGACTGCGGCCAGCTCCCCGACG---ACCACT---------GCTGATCTCATGATTC
ATTCAGCCTTGTTTTTTTTTTTACTTGCTACGT--------ACTACTGAAGCTGAGACGGTTAATATGGAGGGATCCGAT
GGAGGGACTAGTTTGTTTGTTTAGGTGTGTGCGTTGTGCG--TGCGTGTAATTGACTGAA----TGAATGAATAAATTTA
CAGATTCAGTTTGATCAATCTCAAAAGAGTTC--GAGAGATTATTTCTCTT-------CTAACCTGCAAAGATTC----A
TCCATGCTCTAGCT------------------------------------------------------------------
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-------------------------------------------GCCTGTAGATATTCCAATCTTTGATTGAA--------
----------------------------------------AAAAAAATGGAAACCAGCAGCAGCACTAGAAATTTT-GTT
TGACATGTTGAGTGGTTCAGGCATCAAG----------------------------------------------------
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------------------------------------TTAAGTTCACATCAAATGCATGCTTACTATACTTTGTGTCACCT
CTTTTTAGCTCACATTGACATGATCCAACAAAAGATTAACTGGTTCTGATTCAACA---TACTAAGACTAGAAGACCTAG
GTAAGAACATTACACAAGGAAA--TACAATCAAAGTTAAACGTCGGCTTGTTCTGAATCTTCTTCAGGCTTCTTCATCAT
TTGTCAGAGAAACGCAGTATGATCCATTGCCTGAGATAAACTAACTCTGTCGAACCAGCATCCCTGTTTCCATGCACA--
---CCCCAAGGATGTAGCTT----------------------------------CTTGAGACATTGATTATGCACTAGTA
TAAGCCCTTTTATCACTACCGATTCTGTGATAGTTTCA-------------------------------TTCATATGCTA
GAGCTAGCTAAATCTGAATATATTTCTTTCTTTC--TGCTGTTTAATTTCGCCTTGTCAGGTTCAGTCGGAGGATGAAGA
TGAAGAGGTCGAAGCGGGCGACCATGAAGAGGGGTTGTAGTGGAGGCAAGATGCAAGGATATGTATGTCCCTCTGCTGCT
GCTTATTCTCTTTTGTGTATTCTTCTTACCCTTTTTTTTTGGGTACCGGAACTCCATAACATTGTTGTTATCATGTCCAT
GGTGAATTGTGTTTTCTATAAGGG----------------------------------------CCAAAAAGGATCAGAA
CAGGGCATTCTGAATCTGAATTGTCCATCATAGAGCTTAGCAACCAAGTGATGCTCTTACATATGCAGTT-TTAGAATCC
AGAAAACGTATTGAACGATCCATGGTCTAAA------------------AATGAACCAACAGTTCTGAATTCTGAAGCTT
C---ATTATTGTTCAGCTAGACTAAA--AATAACATCCAGCTATTAATTAATTA--AGCACAGCAAAGTTCTTAGTTTAC
ATTTAAGCAGCCTCAGCTTCATCCTCTTGACGGCTGGTTACAGTTTAGAGTTTACATACCAAATCTGGACAG--------
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------------------
>chr4D_28
---------------------------GCTGTTACGCATACCTGTTTGCCGCGTAACCACCATACTGCA-----CTTTGT
TCGACACATAGAAGACATAATATGCAGCTGTGTTCAGTTGATTTCAAAAATTAATAATA--------AAACAGTAGAATT
AGCATATAACAAC-----AAAAGGTGTTGCTTTCCAGAGTATATATAGAAAGGAAAAGCTGAAAGGGAGTAGTCACTAGT
TGCTAGTCCCACTCTGGCATCCTACAAATTAAAGTAGAACTAATGATGATGCGATGTTCCTAATGACATTTATTTTCCAC
TTTTGATTCTATGGTTTGACTGATCTGATTGTTGTCAGATAATAATATTATGTCAAAGAAGTA---GCAGTATTGGTTTT
CTCACATTTTCTATGTACATACACAGGTCCCCTGAGTTTTTTCCTGAAGAAGAATGAGATGATCGATT----------GT
TTGTAAATATGGTCTCGCAGTCGCAGAGGCCTCCATCGTACGCCGTCTGCAAGGAAGA----------------------
-------------------------AAAACTGAGTGAAGT-GGATAGTAGGTTAGGTTGGTACAGAAAA-----GTGGAG
GCAACCTTACATAGCTCAGCAGCGTGTGATCATTGTAA-----AGTAAGCGTTTTCTGATTTTTGGTGCCTTTGTTAATA
GGTGCCATCCATGCTAATTATGGTATAATATATGATAGCACTTGCACTAAATGAATGAGGCGAAATGA------------
------------------------------AGTCCCAGCTGCTAATTAATCATCTTCTGTAGATAAAAGATATGTTTCAT
TGATTACTGATGCAGCTCTTAGTTGGTGCAAGTGC------------------CATGCAGTCTGTGCAAATCG-------
-CTTGCAGCCAGGTACATACATCCTTGATCTTGAATCCTTGTGTGTGTGCAAATCTATCTCCTGTTTGTACA--------
--------------------------------------------------------------------------------
----------------------AGTGATCTAAACACTCTTATATTAGTTTACAGAGGGAGTACGTTGTATTATTTGGTAC
TGCACATTGCAACTATTTTCAGAGATGAAGGAGAAAAGGGCACTTGCACTTTGTTCCACTGTGCAAAATGATTGTTGGCC
ACTTGTTCCAAAACCGCTGTGTCGCTTTCATGGGAAACAAAATTAGTTTTGTATTTATTTTATTTTATAAGAAATAATTT
TTTAGTTACATTTTACTCCCTCCATTCCTTTATGTAAGGCGTATTATTTGCGGCACGTTGATCAAGGCACATAATTATAC
ACATGTTAGGACATAATTATACTCCTTTATGTTAGGAGTATCATTTAATTAATTTCTTTTTTAGAAAAAAAAGGAAACTG
ATGGG--CTCTCAGTGGAATGGGCTGGGATACTTGACACAGAACAGGGCTGTTTGGTAAGGTTCGTTTTTTTTTCTGAGA
AATGTTAAGGTTCGGCTGAGATGGGCCGTTATTGGGAACTGTAACCACCAGATAG----------------GCCCAGGCC
CATTAGAGCCCGTAGAGTGTGTGCTCTGAAAACCCTAAACCCT-CCCCTTTTTATCTCCCCCCACCCAGCCGCCGTTTCC
CCCATCT---------TCTTCTTCCTCCTCCTCACAAC------------------------------------------
----------------------------------------ATCAAGCAAGGTAGGATTTTTTCTTCTTGTCTCCTTGGTT
TCTCTCAGCCTTTGATA----TGTGTTTTTCTTGCGATTGGATTTGGTTTTGC-------TCTC--------GCACATAT
CGAAGGCTTTCTAGGCGTCATTATCCATAGGCCTCTTGAGCTCAATGTTTGTGCCAAATCAA-TCTATTT-TCTTCATGA
TCCTCGCCCTGTGATCTCCAGCAGTGCTACCCTGGACGCCACGCAAGGACCATGAGCACACT-----------------C
CACAATTTGTTTACTTGATTGAATTGTTGATTCGTTTCTCCTCCAATACATGACAAATCTCAAGAATTTATCTGTTGTTA
GATTGGACTGAACTTTTGATCTGCCCTGCAGCAAGCAGCATCCAGCCAT-------------------------------
--GGCGGCCAAGAACCCCAAGGTCTTCTTCGACATCCTCATCGGCCAGGCCAAGGCGGGGCGGGTCATCATGGAGCTCTA
CGCCGACAAGGTGCCCAGGACGGCGGCCAACTTCCGGCAGCTCTGCACGGGCGAGGCCGGCCTGGGCAAGAGCGGCAAGC
CGCTGCACTACAAGGGGTCGGCCTTCCACCGCATCATCCCGGGCTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAAC
GGCACCGGCGGCGAGTCGGTCTACGGCGAAAAGTTCGCCGACGAGAACTTCCTCCTCCGCCACACGGGCCCCGGCGTGCT
CTCCATGGCCAACGCCGGGCCCGGCACCAACGGCTCCCAGTTCTTCATCTGCACCGCCAAGACGCCCTGGCTGGACGGCA
AGCACGTCGTGTTCGGGCAGGTCGTGGATGGGTACGGCGTCGTGGAGAAGATGGAGGCCGTCGGGTCGTCCGGCGGCGCC
ACCGCCGAGCCCGTCGTCATCGAGGACTGCGGCCAGCTCGCCGACGGCGACCAGA---------GCTGATCTCATGATTC
ATTCAGCTTGTTTTTT------------TTTGCTTGCTACCACTGTTGAAGCTGAGACGGTTAATATGGATGGATCGGAG
GGACT-ACTAGTTTGTTTGTTTAGGTGTGTGCGTCGTGCGGGTGCTTGTAATTGACTGAATGATTGAATGAATAAATTTA
CAGATTCAGTTTCATCAATCTCAAAAGT---------------------TTGTCATGTCTAACCTGC-AAGATTT----A
TCCATGCTCTAGTCTTTTGAGATCATGACTGAATGATTGAATAAATTTACAAAATTGTAGTGCTGCTTGAAGATGAGAAT
AGACTACAGATGGTCCAATCTTTTTCTGGATTGAAAAACATAGAACCCAGCAGCAGCACTACATTTTTTTTGACAATGTT
GGTTCAGGCATCAATTAAGTTCACATCACAGGCATGCTTACTATACTTTGTGTCACCTCTTTTTAGCTCAGATTCACATG
ATCCAACACAAGATTAACTGGTCCTGATTCAACATTCTAAGGAAATAGAATCAAAATTAAATGGTCTTGGTCTGAATCTT
CTTCAGGCTTGTTCATCATTTACCTGAGAGAAACGTGGGCGGGCGATCCATTCTAGATGATCCATTGCCTGACACAAACT
CTCTCGGCGACGACACCAAGTTGACAAGGAGACAAGCAGTGTTTTGTAAGGCAGCTATCGCCCCTCTTCATTTCTGCTAC
AAAACAGCAGTGCTAACCTAGATTTTATTTCTTTTCTGTTGGATTCATGCATTGTTGGGGCTTAGTGTTGTTTTGTTTGT
ATTCCAATTTTGTTGACATGAGGTGGATGAATGTTTTCTGTTGAGTTTGTCCTTTCAGTTGTTGCTTGCCCAGATTGTTC
CAGTACAAGGCCTGTGGGATGTGCGTCGTGACTCAGTGGGTGTAATGACTGAATGAATAATTCTGCTCTGCAGATCCAAT
TCCAGTTCCAAGCTAAGCTCCTACATGTTACCAATTGTTTGAGTTTCAGACATTTTCTCCTGTATGTCTAACCTGGAAGA
GCTGTCCATGATGTAACTTGAAGATCAGAAGAAAATTTATTCACATGATCCCATCTTGGAAAAATAATAAACCACCATCA
CTACAAATTTCGTTGAAAATGCCGAGTTTTGGGGGGTTGGATAGTAGAATCATGCACATTATTAGTTTTTGCAAGTAACA
AGAAGTATTGGCAGAATCGCACAAATAGTGATTATAATCGAGAACGCTCTACTGCACGATGAGAGAAACGTTGGATGATC
CTCCCAAGGCATGTAAGCTCAGATTAAAGTGATTTACCTTGTTCAGGTTTCAGTAAAACATGTTACATACGTCTAAAAAT
TAAATTAAATCAAGTGACAGTATCAATGCAGCAACCAAAAATGCTCATCTCACTTGCTCTACCTGTGTAGGAGTATTTCA
TTCAACCAAATATGGTTATCTCACGGCAAGCGTCTTCGGCCAGGTCGTCGACGACCATGGTGTCGTGGAGAAGACGGAGG
AGGCCGTCAGATCCTCCAGGGCACCACCGAGGACTCTGGCCAGATGAAACTGCTGCTGAGTTTTTCTTTCTTTCTTTCTT
TTTTAGGTGTGCGTCGTGCGTCGTGCGTGTAATGACCAAATGAACAAATCTACAGATCCAATTCCAATTCCATGGTGTAT
GATACACATTACCAGGTGCTCTAGCTTCTTGAAGATGAGAATAGACTACAGATGGTCCAATCTTTTTCTGGA--------
-------------------------------------TTGAAAAATATAGAAACCAGCAGCAGCACTAGAAATTTTAG-T
TGACATGTTGAGTGGTTCAGGCATCAATCTTTGTCACCTCTTTGTAGCTCACATTGACATGATCCAACACAAGATTAACT
GGTTGTGATTCACCAGACTAATAAGACTAGAAGACCGTGGTAAGAAGATTCTAAGTAAATAGAATCAAAATAAGACTAGA
AATTTTGTTGACATGTTGTGTGGTTGAGGCATCAATTTAAGTTGACATCACATGCATGCTTGCTATACTTTGTGTCACCT
CTTTTTAGCTCACATTGATATGATCCAACACAAGATTAACTGGTCCTGATTCACCAGACTAATAAGAGTAGACGACCGTG
GTAAGAAGATTGTAAGGAAATACGTAGAATCAAAGTTAAATGGA--CTTGGTCTGAATCTTCTTCAGGCTTGTTCATGAT
TTTACT--------------------------------------------------------------------------
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-----------------------------------------------------------------------------GCT
GGTCCATCACCGTTTGGTCCATCCTTGGGGTCAAGAGAGGCCAAGAGCCTGGCCT----------------CCGCCCTCC
GCAACAGCAGCGATAGAAGCATTCGCCTGACAGTGTAGGGGGACAAGCAGTAATCGAGACACCAAGTTGATAAGCAGTAA
CATCAGCTGGCTAGGTTGGAGGCGTTTGACTTAACACTCCTTTTGCTCTGTGTTTTGTCTCTGCTTCTTGTGTTTCGTTT
CAGTTTTGTACATACTAGTGAACCTGCTGCTGTTTATGTTGGTTTAGGATTCCATTTCGTATCAAATATGTTG-------
------------------
>chr6A_1013
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------------AACCCGAGGGTGTTCTTCGACATGACCGTCGGCGGCGCGCCGGCGGGGCGCATCGTGATGGAGCTGTA
CAAGGACGCGGTGCCGCGGACGGTGGAGAACTTCCGCGCGCTCTGCACCGGCGAGAAGGGCGTCGGCAAGAGCGGCAAGC
CGCTGCACTACAAGGGCAGCGCCTTCCACCGCGTGATCCCCGACTTCATGTGCCAGGGCGGCGACTTCACCAGGGGCAAC
GGCACCGGAGGCGAGTCCATCTACGGCGAGAAGTTCGCCGACGAGAAGTTCGTCCACAAGCACACCAAGCCCGGGATCCT
CTCCATGGCCAACGCCGGGCCCAACACCAACGGCTCCCAGTTCTTCATCTGCACCGTCCCCTGCAATTGGCTCGACGGCA
AGCACGTGGTCTTCGGCGAGGTCGTCGAGGGCATGGACGTCGTCAAGAACATCGAGAAGGTGGGCTCCCGCAGCGGCACC
TGCTCCAAGCAGGTCGTCATCGCCGACTGCGGCCAGCTC-----------------------------------------
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------------------
>SNPs
SSSSSSSSSSSSSSSSSSSS----------------------------S--------------SS-SSSSSSSS-----S
-----------------------------------------------------S--S--SS---S----------S----
---------S---SSSSS-----------------------------S-S-SSSSS-SSS--------------------
-----------S----S-----------S--SSSSSSSSSS-S-SS-SS-SSSSS-SS----------------------
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----------------------------------------S---S---S-SS-----S---S----SSS-SS--S-SS--
S-------------------------------------------------------------------------------
-------------------------------------------------------S-S------SS--------------
----------S-------------S-SS---S---------------------S-S----SS-----S-S--SS------
----------------------------S----SSSSSS-SSSSS-SSSSSSS--SSSSSSSSSSSSSSSS---------
----------------------------------------------------------------S-------------S-
---------------------S-----------SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--------------SS-S--SSS-S-S----S-
-SSSSSSSSSSS-S-S-SSSS-----S----------S-S------------------SS-SS-SSSSSSSS--------
------------------------------------------------------------------SSSSS---------
--------------S----------------------------------------S------------------------
-S------------------------------------SS---------S-SSS-SSSSSSSSSS-SS----SSSSS---
S--SSSSS-S-SSS-SS-S-------------------------------------------------------------
-----------------------------------------------------------S--------------------
-----------------S--------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------------S-------------------------S--------------------------
------------------------------------------------------------------S-------------
----------------------S--------S---S-------------------------------------S------
--------------------------------------------------SS-SSSSSSSSSSS--------S-------
-------------------------------S--------------------------S---S--------SS-------
------------------SSSSSS----SS--------------------------------------------------
----------------------S-----S--SSS--------S----------S---S-----------------SSSS-
--------SSSS--S-----------------------------------------------------------------
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------------------------------------------------S---------S-------S-SS-SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--S---------S-S--S-----S-----
------------------------S---SSSSS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S----------------------------------------------S--
---S-------S---S--------------S---SS-S-SSSSS-----------------S----------------S-
---S------S---------------------------------------S-------------------S------SSS
SSS--------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------------S---S-
----SS---------S----------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S
-------------------------------SSSSS------------------S-------------------------
----------------------S---------S--------------S---------------------------S----
--------------S-S---------S-S-S-S----SS-SSSSSSS-------------S-------------------
---------------S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------SS---
S--------S----S-------------S-S---S------S---------------------SSSS-SSS---------
------S---------S----------SS-SSSSSSSSSSSSSSSSSSS------------------------------S
-SSS----------------------SS--S-----S-----S-----------SS------------------S-----
----------------S-----SS---------S--------------------------------------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
-----------------S-SSSSS-SS-SS-SSSSSSS-SSSSSSSSSSS-SS-SSSSSSSSSSSSSSSSS---S-----
--------S---------------------------------------------S-S-------------S---------
---------------------------------------------------------------S--S-SSS---------
--------S-------------S----------------------------------S-----S------S--SSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_1800
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--------------------CCTCCTCCTCCTCCTCACAA----------------------------------------
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>reverse_2858
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---------------------------------------------------------GTGCCTGGCTGATCTGATGA---
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>forward_1854
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--------------------------------------------------------------------------CCTCCT
CCTCCTCCTGACAA------------------------------------------------------------------
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>reverse_5201
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CCGCCCCAAGGATGTAGATT------------------------------------------------------------
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>forward_2095
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---------------------------------------------------------------------------CATGA
TCCTCGCCCTGTGAC-----------------------------------------------------------------
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>reverse_5715
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----------------------------------CCTTAGCGACCAAGTGATGC--------------------------
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------------------
