>input_sequence_53546
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-----ATGGCCGCCGCACTCTCCTC-------------------------------------------------------
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-------------------------------------CCCCCACCTCGCCGCGACCCTGCCGTCTCTCCGGCCCCCTGCC
CGCCGGCCTTCGCGCGCGGCCTCTCTACTCCCGCCCCGGGGCGCCCGCATCGCCCTCCGTCGCTCCTCCAGGTGCGTGCC
GGCCGTATGATGCCCTCCCTCCTCACCCCCTTCCTTACCCTAGCGTTCCTTCTAACAACGGGCATTGGCCGGAGGCAGGG
GAGGTACC------ATCAGTAGTTACGCTC--------------------------------------------------
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------------------------------------------------------------------------TACTCCGC
CGCTTTCTTTCTTGATTGATGTATTTGGAGTTGCGGCGGCCGTGCGGGCACCCCATTTTGCCAATACCGGCGCAGGGGAA
GAAAGGG----GGTGGATTTCTGGGATCTGTAGGTTTTCGTA--------------GTGTTGCAGAAACCAACTGGAAGA
ATTGACAACATAGGCTCCCCCTTCTTGCCAAACAATTAGCTGCGCCAGTCTTGGAAATACGTAGCATATCACAGTGATTT
ATCCCGTGCTTCATGATGCATCGGGGTTAACTC---------AGTCTTAGGAATACCTAACATGCTACTACAGTAGTATT
TAAATTTATACACTGATTTTGGT-AAAGGAG--AAAAGATCATAGAATGCCTGGAGGAAGGAAACACA------------
------------------------GTAGGATTGGTTT------------TAGGAATTAGTACAAGTGCAATCCCCATGCA
CTGGAACCGGC-TTCTGCTGAACAACATACCCAGTTCATGCTGCAGCACGGCTCAGGAGGCATGGGCCC-TTTTTACAGG
AAGGTTGACGCGATGTTTCTAGACCACGGTGGAGGGCGCAGCACGTTACTGTTCGTCTCAAAACCGGAGGGGTTGCTCCC
AATCGTTATATTTAGAAGACCAACGGATAGGATTGACACTT-AGTTCAGTTCAAAATTAATACACCACA-------TACT
AGTATAGATAAGTTTTGTTATTTGGCTTATCTGATGCACCTATGTGGATCGAATCTGTCATCTGTGGCTTTGCAAAATTG
GGATAACTGCTAACAGCAAAAGAATCACCTACATGTTAGAAATTTCAGTTGTCCATTTTGTGCGCAACCTCATGCCACTT
GAAAATATTTGAGTCGT---------------------------------------------------------------
-CACCTATCTGTTTATCACTCTCACTGATTTGCGCTGCAGGCATCCTTACCCTTCGTCAAGAAATTCTGGATGGTTTGAG
AATGCGGCAAGG--------------------------------------------------------------------
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-----------------------------------------AAGAAAGCTCTGTTTGCATCAGAGACAGATTCCCCTAGC
ACCGAGGTTTCAAAACAGAGCAGCACCGGCGACGCCAACTCTTCTCCACATGGCCCGCCAGTCCTGACCATTTTGGCCGG
TATCGCTGTGTTCTTCCTGCTCTTGTGGGTCATCGGATCGATCTTCACCTGGATCGTCGGTCTCGTCTTCGGGGCTGCGA
AATCTTAG------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G490600
GTTTACAATCTATTAATGGTTTGCTCTGTTACTTTTAAACAATAATAATAACTGCATGAAGTAGAACAAAAGGCTAGCTA
TGAGACCATAAGCTCCATTCCTCTGTTCTGTTTTTTTAA--------------------TATAAAATGTGTGATTGTAGT
TTGCTGACAAGCATATCCGTATGTATGTTA-ATGCAGCTCAACTTGAGGAACTTGGAATGCAGCACCTTGAGCTTCTCAA
CAAGCTTCGA---CGCCTGACTCTGCTCCATGCATGGAGTGCACACAAGAAGGTTCTGTTGTAGCGCTACTATGCAGATC
CAAATCTTGAATTTTAAGGTTTCACGAGGGAACAAGCTATTGTGTTACCCGTAGAGGCTCATGTAAGGGCTACCTGTATC
TGTAGCTTAGCAGCTCATTGTTAGA------TGTGATGACCT-AGGT-----------------TTGGTAGCCCTGTGCT
TGGTTGTAGCTAAGAAACAAATAGAAGAAGCTCATGCTTCTATTCCCAGTT-----------------------------
---------------------------------------------------------TTCTTGTGTAGTATGCCTGTCTG
GAAGCACACCGGCAGGTATGGCCAG-----------------------------------------GAGTGCATATTCAC
ATTCTCGTTGGTGCAAATGGTCACCTGTTTTATCCATACATGTACTAC--------------------------------
-----------------------------------------------CTTGAG-AAACAGGAGCACTCCTTAGGTCGGAA
TTC---------TCATCAAGAAATAGAACTATTTGTTCCCGCAAAAAAAGAAAGAGAAACAAAACTACTCCCTCCGTTCC
TAAATATTTGTCTTTCTAGACATTTCAAATGACTACTACATACGGATGTATGTAGACATATTTTAAAGTGTAGATTCACT
CACTTTGCTCCGTATGTAGTTACTTGTTGAAATGCAAAGACAAGTATTTAGGAATGGAGGGAGTATTTTTCTCTTCGAGA
GCCCCTCCTGATCCTGAAACCCCAAAACCTGTGGTCGCAGCTCGTCATCGCACGCAGCAAAGTGCCAAAACCAGAGCAGG
AGCTGGGCCGACTAGACTACTGAACCAATCCGCGC-------------GCCCTCGCCCTGCT--------CCCCCCTCTG
TCGCCATGGCCGCCGCACTCTCCTC-------------------------------------------------------
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-------------------------------------CCCCCACCTCGCCGCGACCCTGCCGTCTCTCCGGCCCCCTGCC
CGCCGGCCTTCGCGCGCGGCCTCTCTACTCCCGCCCCGGGGCGCCCGCATCGCCCTCCGTCGCTCCTCCAGGTGCGTGCC
GGCCGTATGATGCCCTCCCTCCTCACCCCCTTCCTTACCCTAGCGTTCCTTCTAACAACGGGCATTGGCCGGAGGCAGGG
GAGGTACC------ATCAGTAGTTACGCTC--------------------------------------------------
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------------------------------------------------------------------------TACTCCGC
CGCTTTCTTTCTTGATTGATGTATTTGGAGTTGCGGCGGCCGTGCGGGCACCCCATTTTGCCAATACCGGCGCAGGGGAA
GAAAGGG----GGTGGATTTCTGGGATCTGTAGGTTTTCGTA--------------GTGTTGCAGAAACCAACTGGAAGA
ATTGACAACATAGGCTCCCCCTTCTTGCCAAACAATTAGCTGCGCCAGTCTTGGAAATACGTAGCATATCACAGTGATTT
ATCCCGTGCTTCATGATGCATCGGGGTTAACTC---------AGTCTTAGGAATACCTAACATGCTACTACAGTAGTATT
TAAATTTATACACTGATTTTGGT-AAAGGAG--AAAAGATCATAGAATGCCTGGAGGAAGGAAACACA------------
------------------------GTAGGATTGGTTT------------TAGGAATTAGTACAAGTGCAATCCCCATGCA
CTGGAACCGGC-TTCTGCTGAACAACATACCCAGTTCATGCTGCAGCACGGCTCAGGAGGCATGGGCCC-TTTTTACAGG
AAGGTTGACGCGATGTTTCTAGACCACGGTGGAGGGCGCAGCACGTTACTGTTCGTCTCAAAACCGGAGGGGTTGCTCCC
AATCGTTATATTTAGAAGACCAACGGATAGGATTGACACTT-AGTTCAGTTCAAAATTAATACACCACA-------TACT
AGTATAGATAAGTTTTGTTATTTGGCTTATCTGATGCACCTATGTGGATCGAATCTGTCATCTGTGGCTTTGCAAAATTG
GGATAACTGCTAACAGCAAAAGAATCACCTACATGTTAGAAATTTCAGTTGTCCATTTTGTGCGCAACCTCATGCCACTT
GAAAATATTTGAGTCGT---------------------------------------------------------------
-CACCTATCTGTTTATCACTCTCACTGATTTGCGCTGCAGGCATCCTTACCCTTCGTCAAGAAATTCTGGATGGTTTGAG
AATGCGGCAAGG--------------------------------------------------------------------
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-----------------------------------------AAGAAAGCTCTGTTTGCATCAGAGACAGATTCCCCTAGC
ACCGAGGTTTCAAAACAGAGCAGCACCGGCGACGCCAACTCTTCTCCACATGGCCCGCCAGTCCTGACCATTTTGGCCGG
TATCGCTGTGTTCTTCCTGCTCTTGTGGGTCATCGGATCGATCTTCACCTGGATCGTCGGTCTCGTCTTCGGGGCTGCGA
AATCTTAGGTGTTTATCAATGTTAGGATAGTTCTGCACCTTTTCAGTTGTATATACACTTGTCCCCGGCTGCTGTTTGAT
GATAGCCCTGGATCATTGCATCCTCTGCTGTCATTTCCATCCGAGA-TTCTTGAATAATTGTATTACATATTCCTAGCCA
AAAGTCACGGATTAC-------CACACTGTTATTTCTAGCCATATCTT-GGCTCATGACAGCAAGTGTTGTTATTTTGGA
GAAAGACAGTGCCTGTGTTCGTTCCATTTCTTCTTTGCTGCTGCGTGCGTGCATGCGTGCCTATTGTTGCTGCCAGATTA
TTGCAAGCACATAAACTTTCCCTTTTTCT---------------------------------------------------
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-----------------TATTGATGAGGTGCAATCGAACGTGATCTGAATTTAGTTTTTCTTTTTACCCTGAACTTAGTT
ACTGCAATGGCATGACTA---------------------------------GATGCAGGCTGTCATGGGCCCTATCTCCG
TGCCTGTTGGTGTTTGGATTGTCACCAAAGTCCATCCTA-------------------CGAATTCTCGACCGCTTGCTTT
TTGATATACCT--ATGGCAATGCTCTTTTGACGACCCCAGTTCATTTTTTGGAGCTGATGTTGGCCTCT-----------
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----------------------------------------------------------------------------TCAT
GGCAAGCGAAAGCTCAACAAAAATCTTGGCTAATCTCAGAATATTTTTTTTGGTAGGGGTAAAGTTGGGCACGAACCAAA
CACACCCGGTACC--------TGTGACGTCTGTGTACCAGATCAGA-----GGCCACACTCGATCATTGTGTTGGCA--T
GCCTCCTCGGCCGTGTTTATCAC-----CCACAACGATATGTACTTGGAACAGAGTTACTCGCCTGCAG-----------
---TGCACGACGGAGCAAGTATGTACCACTAC-GTACTCCACTCCACGGCTCACGGGCGCCGTGCT---GTCAGTGC-TG
CTGTCATTTATTATGCCG-------------------GCCGGTCAGCAGATCTAGCCTAACGGCCTGAATCCCGTGGGC-
---GACGACGAGCGATGATGATGGAGATTCCCTTCCGTTCCGCCCGCCGGTGTCACGGGACAAGT--AAACGGTGGTCAT
CACCCGCAAA
>chr4D_1
GTTTATAATCTATCAATGGTTTGTTCTGCTACATTTACACAG---TAATAACTGTATAAAGTAAAACAAAAGGCTAGCTA
TGAGACCATAAGCTCCATTCCTCTGTTCTGTTTGTTT-A--------------------TATAAAATGTGTGGTGGTAGT
TTGCTGACAAGCATATCCATGTGTATGTTTAATACAGCTCAACTTGAGGAACCTGGAATGCAGCACCTTGAGTTTCTCAA
CAAGCTTCGA---CGCCTGACTCTGCTCCATGTATGGGGTGCACACAAGAAGGGTCTGGTGTGGCGCTACTACG------
CAGATCTTCATCTGTAAGGTTTCACAAGGGAACGAACTATTGTGTTGCCCGTAGAGGCTTGTGTAAGGGCTACCTGTATC
TGTAGCTTAGCAGCTCATTGTTAGA------TGTGATGACCTAAGGT-----------------TTGGTAGCCCTGTGCT
TCGTTGTAGCTAACAAACAAAT---AGAAGATCATGCTTGTTTTCCCAGTTTCCATGAGCTGATGCGTTATTCAGAACTT
GTGTTTTGTTCTCATTAGTGTTAGCAAATGTATCAGTCTTTTACGAAACAGATTGTGTTCCTGTGTGGTATGCCTGTCTG
GAGGCACATCCGCAGGTCTCCGGCGGCGGAGCAAACACTGGCCAGGAATCAGGTTCCAGAATGTCCAAGAGCATATTCAG
ATTCTCGTTGGCGCAAATGGTCACCTGTTTTATCCATACATGT---GTTATTTTTGTGTTAAG-AAAAGGCGATGCTCCC
TGACGCTGACGCTTTGTTTGCTACTGGTACATCTCCAAGTGGAAATCCTTGAAAAAACAGGAGCACTCGTTAGGTCGGAA
TTCATACTCTCATCATCAAGAAATAAAACTAAATTTTCCCGAAAAAAAAGAG--AGAAATAAAACTACT-----------
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---------------------------------------------------------------TATGTTTCTCTGCGAGA
GCCTCTCCTGATCCTGAAACCCCAAAACCTGTGGCCGCAGCTCG---TCGCACGCAGCAAAGTGCCAAAACCAGAGCAGG
AGCTGGACCGACTAGACCACTGAACCAATCCGCGCTTGTGTGTGTTGCGCCCTCGCCCTGCCCCCTGCTGCCCCCCTCTG
TCGCCATGGCCGCCGCACT---CTC-------------------------------------------------------
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-------------------------------------CCCCCACCTCGCCGCGACCCTGCCGTCTCTCCGCTCCCCTGCC
CGCCGGCCTTCTCCCGCAGCCTCTCTACTCCCGCCCCGGGGCGCCCGCATCGCCCTCCGTCGCTCCTCCAGGTGCGCGCC
GTATGATGCTCTCCCTCCCCG----CCCCCTTCCTTACCCTAGCGCTCCTTCTACCAACGGGCATTGGCCGGAAGACAGG
GAAATACCATCTCGATTAGTAGCTATGCTC--------------------------------------------------
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------------------------------------------------------------------------TACTCCAC
CACTTTCTTTCTTGAC----GTATTTGGAGTTGCGGCGGCCGTGCGGGCACCCCATTTTGTCACTACGGCTGCAGGGGAA
GAAAGGG----GGCGGAGCTCTGTGATCTGTAGGGTTTGGTA--------------ACGTCGCATAAATGAACTGACAGA
TTTGGCCACGTATGTTAGG--------------------------CGGTCTTGCAAATACCTAACATATCGTAGTGATTC
ATCCCGTGCTTCATGATGCATCGAGGTCAG-TCAGTCAGTCAAGTCTTAGGAATACCTAGCGGGCT-----AGTAGCATT
TTGTATTCTATACTGATTTTGCT-AAAGGAAAAAAAAAATCATAGAATGCCTTGAGAAATGACTCAAGGCAAAGGAATTT
TTCTGAATCTAGAAAGAAAATATGGTAGGATTGACTTTACAGTGAAAAGTAGGAATTAGTATAAGTGCCGTCCCCATCGA
CTGGAATGGGCTTTCTGCTGACCAGCATACTCAGTTCAAGCTGCAGCACGGCTCAGGAGGCATGGGCCCATTTTTACAGG
AAGGTTGACGCGATGTTTCTAGACCACGGTGGAGGGAGGAGCACGTTACTGTTCGTCTCGAAACCGG-----TTGCTCCC
AATCGTTATATTTAGAAGACCAACGGATAGGATTGACACTTGAGTTCAGTTCAAAATTGATACACCATA-------TACT
AGTATAGATAAGTTTTA--ATTTGGCTTATC-GATGCACCTATGTGGATCGAATCTGTCATCTGTGGCTTTGCAAAATTG
GGATAACCACTAACTGCAAAAGAATCACCTACATCT----------------------------------------ACTT
ACAAATACTTGAGTCGTGACATGGTCGTTGAGAGAGCCCATATGGCATCGGTTGTCTCCATGTTAAGTGAATTGGCAAGG
ACACCTATCTGTATATCACTCTCACTGTTTTGCGCTGCAGGCATCCTTACCCTTTGTCAAGAAATTCTGGGTGGTTTGAG
AATGCAACAAAG--------------------------------------------------------------------
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-----------------------------------------AAGAAGGCCCTGTTTGCATCAGATTCAGACTCTCCTAAC
ACCGAGGTTTCAAAACAGAGCAGCACTGGTGACGCCAGCGCTTCTCCGGATGGCCCGCCAGTCCTCACCATTTTGGCCGG
TATCGTCGTGTTCTTTCTGCTCTTGTGGGTAATCGGATCGATCTTCACCTGGATTGTTGGTCTCGTCTTCGGGGCTGCGA
AATCTTAGATGTTCATCAATCTTAGGATAGTTCTGCACCTTTTCAGTTGTATATACACTTGTCTCAGACTGATGCTTGAT
GATAGCCCTGGATCATTGCATCCTCTGCTGTCATTTCCAGCCGAAATTTCTTGAATAATTGTATCACATGTTTCTAGCCA
AATGTCGTGGATCACCGTGTTTCACGCTGTTATTTCTAGCCATATCTTTGGCTCATGGCAGTAAGTGCTGTTATTTTGGA
GAAAGACGGTGCCTGTGTTCGTTCCATTTCTTCTTAGCTGCTGCGTGT--------GTGCCTATTGTTGCTGCCAGATTA
TTGCAAGCGCGTAGACTTC-------------------------------------------------------------
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-------AACTTTTTCATATTGATGAGGTGCAATCGAACTTGATCTGAATTTAGTTT----TTTTTACCTGAACTTAGTT
ACTGCAATCAATGTCATGCCTAGATGCACCAGTACAGGCGATGGCATGGCTGATGCAGGCTGTCATTCTCT--------G
TGCGTGTTGGTGTTTGGATTGTCACCGAAGTACATCCTAGGAATTCTTTGGTCATGGCCGAAACATTGGTCGTTTGCCTT
TTGATATGCCTACATGCCAATGCTCTTTTGACGGATCTAGTTCATTTTGTCGAGCTGATGTTGGCCAAT-----------
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----------------------------------------------------------------------------TCAT
GGCAAGGGAAAGCTCAGTCAAAATA-----------------------TTTGGTAGGGGTAAAGTTGGGCACGAACCAAG
CACACACCAGTGCTTGTGAGTTGTGACGTCTTTGTACCATAACAGA-----GGCCACACTCGATCATTGTGTTGGCACAT
GCCTCCTCGCCCGTGTTTATTACTGTACCCGCAACGATGTGTACTTGGAGCAGAGTTACTCGCCTGCAGAGAGGTACCGC
CGGTGCACGACGGGGCAAGTATGTGCGTACTCGGTACTCCACTCCACGGCTCACGGGCGCCGTGCGTCAGTCAGTGC-TG
CTGTCATTTATTATGCCG-------------------GCA-GTCAGCAGATCTAGCCTAACGGCCTGAATCCCGTGGATG
GATGACGACGAGCGATGATGATGGAGATTCCCTTCCGTTTCGCCCGCCGGTGTCACGGGACAAGT--AAATGGCCGTCA-
----------
>chr4B_1
GTTTATAGTCTATCAATGGTTTGATTTGTTGCTTTTCCACAACAATAACAACTGTATAAAGTAAAACAGAAGGCTAGCTA
TGAAACCATAAGTTCCATTCCTCTGTTCTGTTTTTATTACCACCCGTGGTTGATTTTTGTATGGAATGCGTGGTGGTAGT
TTGCTGACAAGCATATC----TGCATGTTG-ATACAGCTCAACTTGAGGAACTTGGAATGCAGCACCTTGAGCTTCTCAA
CGAGCTTCGAGGACGCCTGACTTTGCTCCGTGTATGGAGCGCACACAAGAGGGTCTGCTTTATGCAGAGCTTAATC----
---------------------------------------TTTTGTAACCTGTAGAGGCTTATGCAAGGGCCACCGTGGAA
GGATGTTTTGTAGACAAACAATTCTTAGACGTGTGATGACCT-AGGTTTCTCCAAATTTACCTGTTGGTAGCCCTGTGCT
TGGTTGTAGCTAGCAAACAAATGGAAGAAGCTCATGCTTGTTTTCCCAGTTTCCATCGACTGATTCATTCGTCAGATCTT
GTGTCCTGTTGCCATCGGTGTTGGCAAATGTATCAGTCTCCTCCGAAACAGATTGTGTTCTTGTGTAGTATGCCTGTCTG
GAAGCACATCTGTGGGTATCCGGCAGATGCGTTCGC-------------CAGGTTGCAGAATATCCGAGAGCATATTCAG
ATTCTCGTTGGTGCAAACGGCCACCTGTTTTATCCATAAATGTACTGTTATTTTTGTGTTAAAAAAAAGGCGGTGCTACC
TGACGTTTAGTTTG---------------CATCTCCAAGTGAAAATTCTTGAG-AAGCAGGAGCACTCTTTAGGTCAGAA
TTTATAATCTCATCATCAAGAAATGAAACTATTTTTTCCCGCAAAAAAAGAA--AGAGAAATAATAC-------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TATTTTTCTCTGCGACA
GCCTCTCCTGATCTTGAAACCCCAAAACCTGTGGCTGCAGCTCG---TCACGCACAGCAAAGTGCCAAAACCAGAGCAGG
AGCTGGACCGGCTAGACTACTGAACCAGTCCGCGCTTGTGTGTGTTGCGCCCTCGCCCTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCCAGCTCGCCGCGACCCTGCCGTCTCTCCGCCC-------
--------TTCGCCCTCGGCCTCTCTACTCCCGCCCCGGGGCGCCCGCATCGCCCTCCGTCGG---TCCAGGTGCGTGCC
GGCCGTATGATGCCCTCCTCG----CCCCCTTCCTTACCCTAGCGTTCCTTCTAACAACGGGCATTGGCCGGAGACAGGG
--AATGCCATCTTGATTAGTAGAGTACTCCCTCCGTCCGAAAATACTTGTCATCAAAATGGACAAAAAAGGATGTATCTA
GAATTAAAATACATCTAGATACATCCCTTTTTATTCATTTTGATGACAAGGAGTATTTAACCAAAAACTACCACAATTCG
CGGAAACGTGACAGAAAACTACCACTTTACAATTTTGTCCCGAAAACTACCACTTTTTTATTAATCCGTGACAAAAAACT
ACCAAGTGTGAAAACTGCTCGCTTTGCCTGCAATCGGGTCCCTAGTTTTTTTTCAAAAAAGCAATCGGGTCCTCCGCCTC
CTTCTCCTCGTCGCCGGCCTCCTCCTTCCCCAGCCGTCCGCAGCTTGCTCGCCATCGCTCGCCATCGAACGGGTCCTTCC
CCTGCGGCCGTCCCCACCCACAACGACGTTGCGGTAGAGGAAGACGGGGAGCGCGTCGATGAAGGCCTGGGGAAGGAGGC
TGGGCATGGGGAAGAAGAGCTATCCTCCTCCCGATCTCGTCCCACTTCTTCTTCTTGGACGGCGGTGCTGTGATCGTCGC
CAGCGCCATTGACGAGGGCGACGAAGAAGATGGCGGCGATGGCGAGGGCGAGGCCGTCGAGCCCAGCCCAGGGGCGCCGA
CCGAGGGACTTGCTCTTCGCCAGGTCCTGCTCGTAGCGGATGTACTTGACGGCGGCCATGGCAAAGTTGAGCCCCTGGGC
GAGCTGGATGCCGCGGACGACGGGGAGCGGCACGAACCAGTAGACGAGCTTCATAAGGCGGGTGACCCCGAGGACGAATA
CGAACGCCGAGGTGAGGATGCCGGCGGCCATCATCTCGGGGACCCCGAAGGAGGCGTCGGAGAGGGCGACGGCGGCGATG
GTCTTCATGGGCTGGACGGGCATGGGGACGCCGTAGAGGAGGCCCGCCGCCCAGTGCCCCTCCACCTTCGCCGCCTGGGT
TGGTGGTGCAGGGTTCACCGGAGCAGGAGGGGACGACGCTGGTGGCGCTGGGTTCACTGGTGATGTCGGAGGCGATGTTG
GTGGCGTTGGCTGTGCTGGCGACGAGGAGGAGAAGGAGGCGGAGGACCCGATTGCTTTTTTGAAAAAAAACTAGGGACCC
GATTGCATTTTTAGCCCGTTTATGTGTGGGGTCGGGCAGTCAGATTCGCGTTTAACCCAGGCAAAGCGAGCAGTTTTCAC
ACTTGGTAGTTTTTTGTCACGGATTAATAAAAAAGTGGTAGTTTTCGGGACAAAATCGTAAAGTGGTAGTTTTCTGTCAC
GTTTCCGCGAATTGTGGTAGTTTTTGGTTAAATACTCGATGACAAGTATTTCCGGACGGAGGGAGTAGTTATTACTCCGC
CGCTTTCTTTCTTGAC----GTATTTGGAGTTGCGGCTGCCGTGCGGGCGTTCCATTTTGCCGATACGGGTGCAGGGGAA
GGAAGGGAAGGGGTGAAGTTCTGCGATCTGTATCTGTAGTAGGGTCTGGTAATTTCGTACTGTAGAGATGAACTGAAAAA
ATTGACCACATATGC-----CTTCCTGCTAACCAGTCAGCTGTGCCAGTCTTGGAAATACCTAACATGTCGTAGTGATTG
ATACCGTGCTTCATGATGTATCGAGGTCAA-TC---------AGTCTTAGGAATACCTAACTTGCTGTTATGTGGA----
--GTATTTTATACCGCTTTTGGTAAAAGGAA--AAAAGATCATAGAATGCCTTGCGAAATGATTCAAGGCAAAATATTGT
CGAATCTAC------------------------------------AAAGGAGGAATTTGTATAAGTGCAATCCCCATTGA
TTGGAACCGGCTTTCTGCTGACCAACATACTCAGTTCAAGCTGCAGCACGGCTCAGGAGGCATGGGCCC-TTTTTACAGG
AAGGTTGATGTGATGTTTCTAGACCACGGTGGAGGGAGCAGCACGTTACTGTCTGTCTCAAAACCGG-----TTGCTCTC
AATCGTTATATTTAGAAGACCAACTGATAGGATCGACACTTGAGTTCAGTTCAAAATTGACACACCATAGTCCACATAGT
AGTATAGATAAGTTTTGTTATTTGGCTTATCTGATGCACATATGTGGATCGAATCTGTCATCTGTGGCTTTGCAAAATTG
GGATAACTGCTAACTGCAAAAGAATCACCTACATGTTAGAAATTTCAGTTGTCCATTTTGTGCGCAACCGCATGCCACTT
GAAAATATTTGAGCGGTGACATGGTTGTGGAGAGAGCCCATATGGCATCGGTTGTTGCCATGTTTAGTGAATTGGCAAGG
GCACCTATCTGTTTATCACTCTCACTGGTTTGCACTGCAGGCATCCTTACCCTTCGTCAAGAAATTCTGGATTGTTCGAG
AGACAGATTCCCCTAACACCGAGGTTTCGAAACAGAGCAGCACTGGCGACACCGACTCTTCTCCAGATGGGCCGCCAGTG
CTCACCATTCTGGCCGGTATCGCTGTGTTCTTCCTGCTCTTGTGGATAATCGGATTGATCTTCACCTGGATCGTTGGTCT
GGTCTTTGGGGCTGCGAAATCTTAGATGTTCAGCAATCTTAGGATAGTTCTGCTCCTTTTCAGTTGTATATACACTTGTT
CCCGACTGATGCTTGATGATAGCCCTGGATCATTGCATCCTCTGCTGTCATTTCCAGCCGAAACTCTTGAATAATCGTAT
CACATATTTCTAGCCAAATTTCATGGATTAACGCGTTTCACGCTGTTATTTCTGGCTATATCTTTGGCTCATGGCAGCAA
GTGCTGTTATTTTGAAGAACGACAGTGCCTGTGTTGGTTCCATTTCTTCTTTGCTTGTCTCCGCGCAGGCTAAGAGAATG
GGCCCTGGAAATTGAATGCGAATAGGCAAGGGCACCTATCTGTGCCCATACGCACATCGGTTCTCTCCATGTTAAGTGAA
ATGGCAAGGAAACCTATATCAGTATGTCACTCTAGTTGTTTTGTACTGCAGGCATCCTTACCCTTTGGCAAGAAATTCCG
GGTGGTTTCAGAATGCAACAAGGTTGAGGACAGAAGACCCAAAGAAGACTCTGTTTGCATCAGATTCAGATTCTCCTAGC
ACCGAGGTTTCAAAACAGAGCAGCACTGGTGACGCCAGCGCTTCTCCGGATGGCCCGCCAGTCCTCACCATTTTGGCTGG
TATCGTTGTGTTCTTCCTGCTCTTGTGGGTAATCGGATCAATCTTCACCTGGACCGTCGGTCTGGTCTTCGGGGCTGCGA
AATCTTAGATGTCCATCAATCATAGGATAGTTCTGCACCTTTTCAGTTGTATATACACTTGTCCCTGGCTGCTGTTTGAT
GATAGCCCTGGATCATTGCATCCTCTGCTGTCATTTCCAGCCGAAA-TTCTTGAATAATTGTATCACATGTTT-TAGCGA
AATCTCATGGATTACCGCGTTTCACGCTGTTATTTCTAGCTAATTTTTTTAAATAATACAATTTTTATATTAAATTTCAG
AAATATTACGCCGTAATTATATTTTTTAAAAATATTACCCAATCGGCCTACTGCTGACTGATTGGATCCAGTCGACCTAC
TGCTGACCGATTGCCCCCCAGTCGGCCCACTGCCGGCTGATTGGATCCAATCGGCCCACTGCTGGCCGATTGGCCCCAGT
CAGCCCACTGGTGGCCGATTGGCATCCAGTCTGCTTCCTCTAGGCCGACAGGTGCATGCACCCATCTATCTGTTGAGTAG
GTATTTTAAAAATGTTGAAAAAGTATTTGAAAAAAATGTTGATCATGCATATAAAAATGTTAATCAAGAATTTTAAAAAA
ATGTGGCACAAGTATTTGAAAATGTTGAACAAATATTTGAAAACTGTTGAATAGGTATTTGAAAAATGTTGAAGAATTAT
TTTAAATTTTTTTGATCATGTATATATAAAAATGTTAATCAAGCATTTGCAACAAATGTTGAAGAAGTATTTGAAAAAAA
TGTTGAACAGGTATTTGAAAAAAATGTTGAACAAGTGCAACAACATTTTTTCAAATAATTGTTCAACATTTTTTCAAATG
CTTGGTTAACATTTTTATATACATGATCAACATTTTTTAAAATGCCTCTTTAATA-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTT
TTCAAATACCT--ATTCAACATTTTTCAAATATTTGTTCGACATCTTTAAAATACTTGTTCAATATTTTTTTAAATGCTT
GATTAACATTTTTATATGCATGATCAACATTTTTTTCAAATACTTCTTCAACATTTTTCAAATACGTATTTAACATATAA
ATGGGTAAATGCACCAGTCGGCCTAGAGGAAGCAGACTGGGTGTCAATCGACCAGCAGTGGGCCGACTGAGGCCAATCGG
CCAGCAGTGGGCCGACTGGATCCAATCAGCCGGCAGTGGGCCGACTGGGGGGCAATCGGCTAGCAGTAGGCCGACTGGAT
CCAATCGGTCATCAGTAGGCCGATTGGGTAATATTTTTAAAAAATATAATTACGGCATAATATTTCTAGCTGCTGCCATG
TCATCAAGAGTTAGTATAAGGTTACAACCTTTTCTCACTTTCTCTCAATCTCTCTCCTCACATTAAATGTTTTCTTTTAC
CTTTTTCATGTTTCTCTTCTCCACATAGGCAAAAGTGCCATGCAAGCAGGCTTATAGCCTACTATTGTACTTGCTCTCAT
GGCAAGCGGCCACTGTGTTGGCATGCCTAA-----TCAGAATATTTTTTTTGGTAGGAGTGAAGTTGGGCACGAGCCAAA
CACACCCGTGC---------TTGTGACGTCTTTGTACCAGAACAGAAGAGAGGACACACTCGATCATTGCGTTGGCT---
------------GTGTTTATTAC-----CCCCGACGATGTGTACTTGGGACAGAGTTACTCGCCTGCAGA-AGGTACTGC
CGTTGCACGACGGAGCAAGTGTGCAGTACACGTACGTC---CTCCACGGCTCACGGGCGGGCGCTGTGCGTGCGTCAGTG
CTGTCATTTATTACGCCGCCGTCGTCGTCGCGGGCCAGCCGGTCAGCAGATCTAGCCTAACGGCCTGCATCCCGTGGATG
ACA----ACGAGCGATGATGATGGAGATTCCCTTCCGTTTTGCCCGCCGGTGTCACGGGACAAATGAAAATGGTGGTCAC
AC--------
>SNPs
-----S-------S---------S-------------S----S-----------S--S-----S----------------
-------------------------------------S----------------------------------S-S-----
------------------S-S--------S---S----------------------------------------------
--------------------------------S-----------------------------S---------S-SSSSSS
--S-----S-SS-S-----------S-------S-S-----------------------S--------------------
--------------------------------------------------------------------------------
-------------S--------S----------------S-S--------------------------------------
--------------------------------------------------------------------------------
--------S-S--------SSSSS---------------------------------------------S---------S
----------------------------------------------SS--------------------------------
--------------------------------------------------------------------S-----------
-------------------------S--------S-----------------SS-----S---------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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---------------SSSSS-----------------------------------------------S--S---------
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>forward_649
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---------------------------------------------------------------------ATGCCTGTCTG
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----------------------------------------------------------------GACAGATTCCCCTAGC
ACCG----------------------------------------------------------------------------
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--------------------------------------------------GTCCATTTTGTGCGCAACCT----------
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--------------------------------------------------GGAGCTGATGTTGGCCTCTT----------
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--------------------------------------------------------------------------------
----------
