>input_sequence_53460
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------------------------------------ATGTTGCATGGTTACTTCTTCAAACTATTTTTTTA-TGCTCTCT
TCAGTTTGTTGATGTTTTT---TATTTTAATGCAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCT
AGGAAGAGGGTTGCAGACAAACAAATCAACAAGGATCATCCTGAGCCTGATGATGACTCATCGGAACAAGAGACAGGAAC
ATTTAAGAAAGCTAGTGAAGAAGTGATGGCAACCCGGAAGATTGTAAAGGTTCGACGTCAGCAGCCATCAGCAGCTCCTT
CTTCAAATCCTTTCTCTGCAATTAGATTCACCCCCAGTGATTCCATTGCTCAAGCAAGTATCACAGTCTCAGAGCCTCCA
CCTTCTGATGTTAGCAATGGCA----------------------------AGTCCAGTGTCCTAACTGAAGCACCCTCTC
AACTTGTTGAGTCAGACGGCAAGGCAGAAGTTACAGTGGATGGAACTGGTGAGGACAAAGTGGTTGTTGAAGAACCCAAG
GAAGATAACAGCAAGACATCTGAAATTGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGC
TGGAGGTGAAGATAAAGTCAGCAAGGATGATGATGAGAAAAATGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTG
AGCAGAAGGATGCTGATAACAAAGGGCAGTCATCATCACCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAA
AATGCTTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAA
TGCTCCCCTATTTGGGCTAAAGAGTGATGGCTCATCATTCCCTTCTTTCAACATGGGTGCTCC---GAACAATGGGAGTT
CTGCCCCATCACTCGCCACTGCAGCAGACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACTGGCGAAGAG
AATGAGAAGGCTGTATTCACTGCTGACTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAAGGGTGA
ACTGAAGCTGAACATCCCGGTATCTGGCGGCGAGAGATCTCGGCTCGTCATGAGGGCGAAGGGCAACTACCGGCTCATTC
TGAATGCAAGCCTTTACGACGACATGACGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATC
GGGGAATCACCGAGTGGGCTCACCACATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGT
GGAGACACACAAGGCGAAGAAGGCTTCGGACACG---CCAAAGACTCCTGAGGGCTCCCCGAAGGCGTCCGACGTTTGA-
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G238000
CAAGGTATACAAGCTCCAAAGGAACTTGCTGCTATTCATTAAGTAATATCTCATGTAGGTTTACCATAATACATTTTGTG
TAAGATATGTTA---AATCATTGAGTTTCTGCTTCTGAGGTTAATTTCGTTAACATGGTGTAATGAAGACTGGCTGCTTT
GGTCTATATGACTATGGCTGCAAAGTTTTGTTATCTGCGAATAAAACATTCAAACTATGCTAT--ATTGAGCTCCAGCTT
TGGTGCTTTCCCTTCTATACCAATACGATCTACGTCACTT-------------------------TAATGTCCAGTATTA
TAGTTTTGTTTGTATGTCCATTATTATCCAATACAGAAAACAAA--------------GCTTGGTGTGTTCTATTC----
------------ACATAAGTTTGCCATTTTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTATTGCCA
TGCCAATCAAGTTTG----------------CACTGCACTACTGCAGCTTGGCTGCCATTAGGAATTTTCCTCTACATCA
GTATATTTGGGTAAGCTAGATTTT-ATTTGTTCTCTGATTGAATATTTGTCATTGTTGTTGCATAG--------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AATCAATCTGCTTTA
GCTGTTAAATAGTACCTATATGGCTATATCTTTAAGCATAATGTTGTACATGTGACATGTGAGGGACAGCGGGAGTTGTC
TGACTGACATGTACTGGGGACGCATGGCTTCTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCC
AACACTGTGTCTCAGGAAAAGATTTGTTTCGCATGCTGCGCCAACCCAGAAATTACCATTCGGCATGTTGTTATAGGCAA
CATAATTTTCCTTCACAAATCTTGTTTAGTCTTTAGTTACAGAGATGCCGGGTGAAGTCGGGGAAGTATTCATGTTTGCT
TCCCTTTCCTTTCAACTTTTTAGTTTGCCTTATGGTTTATTCTGTAGTTGGGTTGGTGCAATACAAAAAGAAGGAATCTG
CATAATCAAAGTCCTTTAAAACTATGCTAATCTTTGATGTTGCATGGTTACTTCTTCAAACTATTTTTTTA-TGCTCTCT
TCAGTTTGTTGATGTTTTT---TATTTTAATGCAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCT
AGGAAGAGGGTTGCAGACAAACAAATCAACAAGGATCATCCTGAGCCTGATGATGACTCATCGGAACAAGAGACAGGAAC
ATTTAAGAAAGCTAGTGAAGAAGTGATGGCAACCCGGAAGATTGTAAAGGTTCGACGTCAGCAGCCATCAGCAGCTCCTT
CTTCAAATCCTTTCTCTGCAATTAGATTCACCCCCAGTGATTCCATTGCTCAAGCAAGTATCACAGTCTCAGAGCCTCCA
CCTTCTGATGTTAGCAATGGCA----------------------------AGTCCAGTGTCCTAACTGAAGCACCCTCTC
AACTTGTTGAGTCAGACGGCAAGGCAGAAGTTACAGTGGATGGAACTGGTGAGGACAAAGTGGTTGTTGAAGAACCCAAG
GAAGATAACAGCAAGACATCTGAAATTGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGC
TGGAGGTGAAGATAAAGTCAGCAAGGATGATGATGAGAAAAATGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTG
AGCAGAAGGATGCTGATAACAAAGGGCAGTCATCATCACCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAA
AATGCTTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAA
TGCTCCCCTATTTGGGCTAAAGAGTGATGGCTCATCATTCCCTTCTTTCAACATGGGTGCTCC---GAACAATGGGAGTT
CTGCCCCATCACTCGCCACTGCAGCAGACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACTGGCGAAGAG
AATGAGAAGGCTGTATTCACTGCTGACTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAAGGGTGA
ACTGAAGCTGAACATCCCGGTATCTGGCGGCGAGAGATCTCGGCTCGTCATGAGGGCGAAGGGCAACTACCGGCTCATTC
TGAATGCAAGCCTTTACGACGACATGACGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATC
GGGGAATCACCGAGTGGGCTCACCACATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGT
GGAGACACACAAGGCGAAGAAGGCTTCGGACACG---CCAAAGACTCCTGAGGGCTCCCCGAAGGCGTCCGACGTTTGAA
ACCCCACCCCGGTGTTCCGCGTTTTGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCTTCCTGGAGTCT
TATAAAGTTAAAACATATCGTACCCATGTCATGTGGTTTCTGGCGTGTCCTGTGGCTGGTCTGGAACGGTGGGTGGTCTG
TTGAACTTTAATTAAAGTCATAAATCTTGGTAAACTGGAGAAATGGGACTCGTTTCAGGCTAT--GCTTCTTCTGCTATG
CGATATGTAGTATATTCAGTA---ATGTATTTTAGTGAGTCA-TCACCACATCACTGTCTTATGCATGTTCATCGTCGCG
TTTGCACATGTTCATCTTTGTGTTTGCACTAATGTAGTGTCAAAAACGTTTTTATATTATGGGACGGAGGGAGTAGAATA
GACGGACTATGCCGTTGGATGGCTTGTCTGTATTGTGAAGTCAATCTCTTGGGGAGGTTTTATCATTTAGTGTCCACAAC
AGTGCCATCTTGCCACTAGTTTTACGTGGACACACTTCAGGTTCTTTTGAACT-------TGAGTGTTTCTTTATTTTAC
AAATTTTTGTAAAAAGTGTTTTTTATCCGGTCGAGCATCTGCACACTCTTTATCAAGTGCGGGCTGAGCTTGTTTGAACT
TGGGTCTTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATTTATTGCTAGTACGTTTGCAGTTCAGGCA
AAAAAGAACGAAAGAAAAACACGGCATGGACGCTTTTCCTACTCTCGGAATCCTGCCAAAGTGCCAAGAGCTAGCAAAAC
ATTCTCTAGTGGAGTA---GTAGCACTAGTTATGCAAGGATTGCAAGTCATGACTGGACATCCTATCAAGCAATGTTTTT
CGTTTTGGAATCATTCGACTCGTACCG----------CGCAGTTTTCACCTCGCCATTCACGCGCCCTCCGCGTACCTAG
GCAC------------------------------------------CCGAAAGCGACGGCGATCGATCGAGTGCGACGTG
GACCAGACTTATCTTGGGTAGGAGTAT---------GTAACAACAAACACGCGGACGTGGCTCCGCGGCGCGATAG
>chr1D_1
CAAAGTATCCAATCTCCAAAGAAACTTGGTGCTATTCATTAAGTAATGTCTCATGTAGGTTTACCATAATGCATTTTGTG
TAAGATATGTTATTAAATCATTGAGTTTCTGCTTCGAGAGTTAATTTCGCTAACATGGTGTAATGAAGACTGGCTGCTTT
GGTCTATATGACTATGGCTGCAAAG-TTTGTTATCTGCAAATAAAACATTCAAACTATGCTATATATTGAGCTCCAGCTT
TGGTGCTTTCCCTTCTATATCAATAAGATCTACTGTAACTTGTCCACCTACCTATGTCACTTGGCTAATGTCCAGTATTA
TAGTTTTGTTTGTTATGTCA--ATTATCCAATACAGAAAACAAACTTAGACAAATTTAGCTTAGTCACACAAGTTTGTTA
TGTCAGCATGTTACATAAGTTTGCCATTGTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTCTTGCCA
TGCCAATCAACTTTG----------------C--------ACTGCAGCTTGGCTGCCATTAGGAGTTTTCCTCTACATCA
GTATATTTGGGTAGACTAGATTTTTATTTGTACTCTGATTGAATATTTGTGATTGTTGCTGTATAG--------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AAATTATTCTGCTTTA
GCTGCTAAATAGCACCTATATGGCTATATCTTTAAGCATAATGTTGCACACATGACATATGCGAGACAGCGGGAGTTGTC
TGACTGACATATAATGGGGACGCATGGCTTCTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCC
AACACTGCGTCACAGGAAAATATTTGTTTCCCACGCGGCGCCAACCCAGAAATTACCGTTTGACATGTTGTTATGGGCAA
CATAGTTTTCCTTCACAACTCTTGTTTAGTCTTTAGTTACAGAGATGCCGAGTGAAGTCAAGAAAGTATTCATGTTAGCT
TC-----CCTTTCAATTTTTTAGTTTGCTTTATGGTTTATTCTGTATGTGGGTTGGTGCATTACAAAAAGAAGGAATC--
-----------------AAAACTGTGCTAATCTCTGATGTTGCATGGTTACTTCTGCAAACTATTTTGTTAATTTTCTCT
TCAGTTTGTTGATGTTTTTCATTATTTTAATGTAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCT
AGGAAGAGGGTTGCAGACAAACAAATCAACAAGGATCATCCTGAGCCTGATGATGACTCATCGGAACAAGAGACAGGAAC
ATTTAAGAAAGCTAGTGAAGAAGTGATGGCAACCCGGAAGATTGTAAAGGTTCGGCGTCAGCAGCCATCAGCAGCTCCTT
CTTCAAATCCTTTCTCTGCAATTAGATTCACCCCCAATGATTCCATTGCTCAAGCGAGTATCACAGTCTCAGAGCCTCCA
CCTTCTGATGTTAGCAATGGCA----------------------------AGTCCAGTGCCCTAACTGAAGCACCCTCTC
AACTTGTTGAGTCAGATGGCAAGGCAGAAGTTACAGTGGATGGAACTGGTGAGGACAAAGTGGTTGTTGAAGAACTCAAG
GAAGATAACAGCAAGACATCTGAAATTGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGC
TGGAGGTGAAGATAAAGTTAGCAAGGATGATGATGAGAAGAATGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTG
AGCAGAAGGACGCTGATAACAAAGGGCAGTCATCATCGCCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAA
AATGCTTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAA
TGCTCCCCTATTTGGGCTAAAGAGTGATGGCTCATCATTCCCTTCTTTCAACATTGGTGCTAC---CAACAATGGGAGTT
CTGCCCCATCACTCGCCACTGCAGCAGACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACCGGCGAAGAG
AACGAGAAGGCTGTATTCACTGCTGACTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAGGGGTGA
ACTGAAGCTGAACATCCCGGTATCTGGCGGTGAGAGATCTCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTCATTC
TGAATGCAAGCCTTTACGACGACATGACGCTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATC
GGCGAATCACCGAGTGGGCTCACCACATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGT
GGAGACGCACAAGGCGAAGAAGGCTTCGGACACG---CCAAAGACTCCCGAGGGCTCCCCGAAGGCGTCCGACGTTTGAA
ACCC-ACCCCGGTGTTCCGTGTTTTGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCATCCTGGAGTCT
TATAAAGTTAAAACATATCGTACCCATGTCATATGGTTTCTGGCGTGTCCTGTTGCTGGTCTGGAACGGTGGGTGGTCTG
TTGAACTTCAATTAAAGTCATAAATCTTGGTAAACTGGAGAAATGGGACTCGTTTCAGGCTATATGCTTCTTCTGCTATG
CGATATGTAGTATATTCAGTA---ATGTATTTGAGTGAGTCA-TCACCACATCACTATTTTATGCATGTTAGTCGTCGCG
TTTGCACATGTTTTTTCACCGGTTGCTGCATTTCGCAGCTTTTCTACTTC------------------------AGAATA
GGTGGACTATGGCGCTGGATGGCATGTCTGTACTGTGAATTCAGTCT--------GGTTTTACCATTTAGTGTCCACAAC
AGTGCCATCATGC-ACTAGTT-----TTGACACACTTCATGTTATTTTGAAGTTGCAACATGAGTCTTTGTTTATATTGC
AGATATTTGTAAAAAGTG-TTTTTATGAGGTCGAGCATCTGCATA--CTCTATCAAGCGCGGGCTGAGCTTGTTTTAACT
TGGGTGTATCTGTAGAACCCTTTTGATCCAATTCTTTTTCTGTGGTATTGAACTTGTTTGGTTTTAAGGATTAGAATCCT
CGGAAAGTTTTCACGTGGGTCGCTTTCGTACTCAACTCAAAAGAATTTTCCTTTCCCGTGGACCTCGAGCTTTTGGAAAT
GTTCTTTCATGTCTACGACGACCATGCATGTTTT-AGACAGCTTTGATTATTTATTGCTAGTACGTTTGCAGTTCGGGCA
AAAAAGAA--AAAAAAAAACACGCCATGGACGCTTTTCCTACTCTGGGAGGGAATCC----TGCCAAGAGCCAACCAAAC
ATTCTCTAGTGGAGTT---GTACTAAT-------------TTGCAAGTCATGACTGGACATCCTATCAAACAATGTTTTT
CGTTTTGGAATCACTTG--ATTCAAGTCGTGCTAGTACGCAGTTTTCACCTCGCCATTCACGCGC---CCGCGTACCTAG
GCATGGCAATTTTTTTGAACACTAGGCATGGCAATTGGCAAGGCATCCGAAAGCGACGGCGATCGATCGAGTGCGACGTG
GACCGGACTTATCTTAGGTAGGAGTATAT-------GTAACAACAGACACGCGGACGTGGCTCCGCGGCGCGATAG
>chr1A_1
CAAAGTATACAAGCTTCAAAGGAACTTGGTGCTATTCATTAAGTAATATCTTGTGTAGGTTTACCATAATACATTTTGTG
TAAGATATGTTA---AATCATTGAGTTTCTGCTTCGAGAGTTAATTTTGTTAACAT-GTGTAATGAAGACTGGCTGCTTT
GGTCTATATGACTATGGCTGCAAAG-TTTTGTATCTGCGAATAAAACATTCAAACTATGC--TATAATGAGCTCCAGCTT
TGGTGCTTTCCCTTCTATATCAATAAGATGTACTGTAACTTGTCCACCTACCTATGTCGCTTGGCTAATGTCCAGTATTA
TAGTTTTGTTTGTTATGTCA--ATTATCCAATACAGAAAAAAAACTTAGACAAATTTAGCTTAGTGTTTTCTATTC----
------------ACATAAGTTTGCCATTTTACTTAATTTTCGAAATAGTTATGTTTTTAATTTTGCATAACTTATTGCCA
TGTCAATCAAGTTTG----------------C--------ACTGCAGCTTGGCTGCCATTAGGAGTTTTCCTCTACATCA
GTATATTTGGGTAGGCTAGATTTTTATTTGTACTCTGATTGAATATTTGTCGTTGTTGT-ATACTCCCTCCATTCCTAAA
TATAAGTCCTTTTAGAGATTTCAATATGGACTATATACGGATGTATATAGACATATTTTAGAGTATAGATTCACTCATTT
TGCTCCGAATGTAGTCTCTATTGTAATATTTAAAAAGACTTATATTTAGGAACAGAGGGAATATAAATTATTCTGCTTTA
GCTGCCAAAGAGCACCTATATGGCTATGTCTTTAAGCATAATGTTGCACACATGACATGTGCAAGACAG-GGGAGTTGTC
TGACTGACAGATACTGGGAACACATGGCTTGTAGCTCTCTAGGAGATGATACCATGCCTTTGGTATGTCAGTACTGTGCC
AGCATCGTGTCACATGAAAAGATTTGTTCCCCACT-TGTGCCAACCCAGAAATTACCATTTGACATATTGTTATTGGCAA
CATAGTTTTCCTTCACAAATCTTGTTTAGTCTTTAGTTACAGAGATGCTGGGTGAAGTCGGGAAAGTATTCATGTTTAGT
TCT-----CTTTCAACTTTTTAGTTTGCTTTATGGTTTATTCTGTAGGTGGGTTGGAGCAATACAAAAAGAAGGAATCTG
CATAATCAAAATCCTTTAAAACTGTGCTGATCTCTGATGTTGCATGGTTACTTCTGCAAACTATTTTGTTAATGTTCTCT
TCAGTTTGTTGATGTTTTT---TATATTAATGTAGCCAAAACTTGTAAGGATGGCGGACGAGGAACATGCTCAAACTTCT
AGGAAGAGGGTTGCAGACAAACAAATCAATAAGGATCACCCCGAGCCTGATGATGACTCATCGGAACAAGAGACGGGAAC
ATTTAAGAAAGCTAGTGAAGAAGTGATGGCAACCCGGAAGATTGTAAAGGTTCGGCGTCAGCAGCCATCAGCAGCTGCTT
CTTCAAATCCTTTCTCTGCAATTAGATTCACGCCCAGTGATTCCATTGCTCAAGCAAGTATCATAGTCTCAGAGCCTCCA
CCTTCTGATGTTAGCAATGGCA----------------------------AGTCCAGTGCCTTAACTGAAGCACCCTCTC
AACTTGTTGAGTCAGATGGCAAGATAGAAGTTACAGTGGATGGAACTGGTGATGACAAAGTGGTTGTTGAAGAACCCAAG
GAAGATAACAGCAAGACATCTGAAATCGAGGGCAAAACAAATGATGGAGATGCTGAAGAGAAGAAAGCAGTGGATGAAGC
TGCAGGTGAAGATAAAGTTAGCAAGGATGATGATGAGAAAAATGGTGAAGCTGAATCGGGAACCAAGGATGGATCATCTG
AGCAGAAGGATGCTGATAACAAAGGGCAGTCATCATCGCCGACACCTCTTTTCTCCTTCACCAATCTGTCAAGTGGCCAA
AATGCTTTCACAGGACTGGCTGGAACTGGATTTTCAGGCTCATCATTTTCATTTGGCTCGGGCTCTAAAGACAGCTCAAA
TGCTCCCCTATTTGGGCTAAAGAGTGATGGCTCATCATTCCCTTCTTTCAACATTGGTGCTAC---CAACAATGGGAGTT
CTGCCCCATCACTCGCCACTGCAGCAGACGCACCGAAGAAATTTGCCATGTCAGAGGGCCCAGTTGAAACCGGCGAAGAG
AACGAGAAGGCTGTATTCACTGCTGACTCTGCTATATACGAGTACCTCGACGGCGGCTGGAAGGAAAGAGGAAGGGGTGA
ACTGAAGCTGAACATCCCGGTATCTGGCGGTGAGAGATCTCGGCTCGTCATGAGGGCCAAGGGCAACTACCGGCTCATTC
TGAATGCAAGCCTTTATGATGACATGACACTGAAGGACATGGACAAGAAGGGCGTGACGTTTGCTTGCATCAACAGCATC
GGCGAATCACCGAGCGGGCTCACCACATTTGCTCTGAAGTTCAAGGATACCGGCATCCGGGAAGATTTCAAGGCTGCAGT
GGAGACGCACAAGGCGAAGAAGGCTTCGGACACG---CCAAAGACTCATGAGGGCTCCCCGAAGGCGCCCGACGTTTGAA
ACCC-ACCCCGGTGTTCCGTGTTTTGATGTGTATGTGTCGGAGCAAGGAGCCGAGGCGTTCCTTGCTCTTCCCGGAGTCG
TC--AAGTTAAAACATATCGTACCCATGTCATATGGTTTCTGGCGTGTCCTGTCGCTGGTCTGGAACGGTGGGTGGTCTG
TTGAACTTTAATTAAAGTCATAAATCTTGGTAAACTGGAGAAATGGGTCTCGTTTCGGGC--TATGCTTCTTCTGCTATG
CGATGTGTATTATATTCAGTAGTAATGTATTTGAGCGAGTCTGTCACCAAGTCACTGTTTTATGCATGTTCGTCG-----
TTTGCACATGTTTTTTCACCGGTTGCTGCATTTCGCAGCTCTTCTACTTC------------------------AGAATA
GATGGACTATGCCGCTGGATGGCTTGTCTGTATTGTGAATTCATTCTCTTGGGGAGGTTTTACCATTTAGTGTCCACAAC
AGTGCCATCATGC-ACTAGTTTTACATTGACACACTTCAGGTTCTTTTGAACTTGCAACATGAGTTTTTGTTTGTTTTAC
AAATATTTGTGAAAAGTG-TTTTTACCAGGTCGAGCATCTGCACACTCTTTATCAAGCGCGGGCTGAGCCTGTTTGAACT
TGGGCGTGTCTCTAGAACCCTTTTGATCCAATTCTTTTTATGTGGTATTGAACCTGTTTGGTTTACAGGACTAGAATCCT
TGGAAAATTCTCACGTGGGTCGCTTTCGTACTCAGCTCAAAAGAATTTTCCTTTCCCATGGACCCCAAGCTTCAGGAAAT
GTTCTTTCATGTCTACGACAGCCATGCATGTTTTTAGACAGCTTGAATTATTTATTGCTAGTACGTTTGCAGTTCAGGCA
------AA--AAGAAAAAACACGCCATGGACGCTTTTCCTACTCCT----GGAATCC----TGCCAAGAGCCAATAAAAC
ATTCTCTAGTGGAGCAGTAGTACTAAT-------------TTGCAAGTCATGACTGGACATCCTATCAATC----TTTTT
CATTTTGGGATCACTCATCATTCAAGTCGTACTGGTACACAGTTTTCACCTCGCCATTCACGCGC---CCGCGTACCTAG
GCATCAGGCAA-------------------------GGCAAGGCATCCGAAAGCGACGGCGATCGATCGAGTGCGACGTG
GACCGGACTTATCTTCGGTAGGAGTATATATATAAGGTAACAACAAACACGCGGACGTGGCTCCGCGGCGCGATAG
>chr6D_334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------AGCTTAGTGTATTCTATTC----
------------ACATAAGTTTGCCATTTTACATAATTTAGCAATATGTACGTGCTTAA--TTTTCATAACTTCTTGCCA
TCCCACAAAAATGAAGAAACATGTCTGTCCAC--------ACTGCAGCTTGGCTGCCATTAGGAGTTATCCTGTAGATCA
GTATATTTG--------------TTTTTTTTACTTTGATTAAATGTTTCTCATTATTTT-GTATAG--------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AAATTTAGCAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TA-TGTTCTCT
TTAGTTTTT---------------TTTTCATGTAGACAAAACTAGTAAGCATGGCGGACAAGAAACCTGCTCAAACTTCT
AGCAAGAGGGTTGCAGACAAACAAATCAACAAGGATCACCCTGAGCATAATGACAACTCATCGTAACAAGAGACAGGAAC
ATTTAAGAAAGCTAGTGAGGAAGTGATGGCAACCCGAGAGATTGTAAAGGTTCAGAATCAGCAGCCGTCAATAGCTCCTT
CTTCAAATCTTTTCTCTGCAATTATATTCAAGCCAAGTGATTCCACTGTTCAAGCAAGTATGGCAGTCTCAGAGTCTCCA
CCTTGTGATGTTAGCAATGGCA----------------------------------------------------------
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>chr6B_1061
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------TT---TATTTTCATGTAGA-AAATCTTGTAAGGATGGCGGACAAGAAACATGCTCAAACTTCT
AGGAAGAGGGTTGCAGACAAACAAATCAACAAGGATCACCCTGAGCATAATGACAACTCATCGGAACAAGAGACATGAAC
ATTTAAGAAAGCTTGTGAGGAGGTGATGGCGACCCGAGAGTTTGTAAAGGTTAAGAATTAGCAGCCGTCAACAGCTC---
CTTCAAATCCTTTCTCTGCAATTATATTCAAGCCAAGTGATTCCACTGTTCAAGCAAGTATGGCAGTCTCAGAGCCTCCA
CCTTCTGATGTTAGCAATGGCAGTGGGAAAGAGTCGGATGAAAAAAAACAAGTCCAGTGACATAACTGAAGCACCGTCTG
AAC---------------------------------------------------------------------AACACAAG
GAAGATAATAGCAAGATATCTGGAATCAAGGACAAACCAGAAGATGGAGATGCTGTAGAGAAG---GCAGTAGATGAAGC
TGGAGGTGAAGGTAAAACCAGCAACGATGATGATGAGAAGAAAGATGAAGCTGAATCAGGGACCAAGGATGGATCATCTG
AGCAGAAGGATGCTGATAATAAAGGGTAGTCATCATTGCCGACAGCTCTTTTCTCCTCAATGAATTTGTCAACTGGCCAA
AATGCTTTTATGGGGCTGGCTGGAACTGGATTTTCAGGC------------------------TCTAAAGAAAGCTCAAA
TACTCCCCTGTTTGAGCTAAAGATTGATGGCTCATAATTCCCTTCTCTCAACATTGGTAGTACGAACAA---TGGGAGTT
CTACCCCAGTACTCGCCACTGCAGCAGAGGCACCACAGAAATTTGC----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr7B_1561
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AGTGAATGAAGG
TGGAGATGAAGATAAAAGCAGCAAGGACGGCGCTGAGAAGAAAGATGAATCTGAATCAGGGACCAAGGATGTATCATGTG
AGCATAAGAACGCTGATAATAAAGGGCAGTCATCATCACCGACACCTCTCTTCTCTTTTATGAATGTGTCAAGTGGCCAT
AATGCCTTCACGGGACTGGCTGGGACAGGGTTTTCAGCCTCATCATTTTCCTTTGGCTCAGCTTCTAAAGAAAGCACAAA
CGCTCCCCTATTTGGGCTAAAGAGTGACGGTTTGTCCTTCCCTTCTTTCAATATGGGTGGTACGAACAACAACGGGAGTT
CTGTTCCATCGCTTGTCACTGCAGCAGAAGCACCAAAGAAATTCACCATGCCAGAGGTCCCAGTGGAGACAGGCGAAGAG
AACGAGATGGCTGTGTTCACCGCAGACTCCGCAATGTACGAGTACCTCGATGGGGGCTGGAAAGAAAGAGGAAAAGGGGA
GCTAAAGCTGAACGTCCCTGTGTCTGGCGGCGAGAGGTCCCGGCTCGTTATGAGGGCCAAGGGTAACTACCGGCTGATCC
TGAATGCGAGCCTGTACGACGACATGGCGCTGAAGGACATGGAGAAGAAGGGCGTGACGTTCGCCTGCGTCAACAGCACC
GGGGACTCGCCGAGCGGGCTCACCACGTTCGCCCTCAAGTTCAAGGACACTGGCGTCAGGGATGATTTCAAAGCCGCGGT
GGAGGCGCACAAGGCGAAGAAGGCCTCGGACGCGATGCCCAAGACGCCCGAGAGCTCCCCCAAGGTGTC-----------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr7A_1687
--------------------------------------------------------------------------------
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----------------------------------ATCACCAACACCTCTGTTCTCTTTTATGAATGTGTCAAGTGGCCAT
AACGCCTTCACAGGACTGGCTGGAACTGGGTTTTCAGCCTCATCATTTTCCTTTGGCTCAGCTTCTAAAGAGAGCACAAA
TGCTCCCCTATTTGGGCTAAAGAGCGATGGTTCATCCTTCCCTTCTTTCAATATCGGTGGTACAAACAACAACGGGAGTT
CTGTTCCATCGCTTGTTGCTGCAGCAGAAGCACCAAAGAAATTCACCATGCCAGAGGGCCCAGTGGAGACAGGCGAAGAG
AACGAGATGGCCGTGTTCACCGCAGACTCCGCAATGTACGAGTACCTCGATGGGGGCTGGAAAGAAAGAGGAAAAGGGGA
GCTAAAGCTGAACGTCCCCGTGTCTGGCGGCGAGAGGTCCCGGCTCGTTATGAGGGCCAAGGGTAACTACCGGCTGGTCC
TGAACGCGAGCCTGTACGACGACATGGCGCTGAAGGACATGGAGAAGAAGGGCGTGACGTTCGCCTGCGTCAACAGCACC
GGGGACTCGCCGAGCGGGCTCACCACATTCGCCCTCAAATTCAAGGACACTGGCATCAGGGATGATTTCAAAGCCGCGGT
GGAGGCGCACAAGGCGAAGAAGGCCTCGGACGCGATCCCCAAGACGCCCGAGTGCTCCCCCAAGGTGTCTGATGACTGAA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>SNPs
---S------------------------S---------------------------------------------------
-----------------------------------SSSS-----------------------------------------
-------------------------S------------------------------------------------------
-------------------S-----S-------SSS-SS-----------------------------------------
-------------SSSSS--SS----------------------------------------S----S------------
--------------------------------------------------------------------------------
--------------------------------SSSSSSSS------------------------S---------------
-------------S-----------------S-----------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
----S-------S---------------------------------S---SS---------S-S----------------
----------S---------------------------------------------------------------------
-----------S------------------S--S--------------------------S-S-----------S-----
----S---------------------------------------------------------S-----------------
--SSSSS---------------------S------------------S--------------------------------
----------S------------S---------S---------------------S-----------S------S-----
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S----S-------------
----------------------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----S--------------S------------------------------------------------------------
--------------------------------S--------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------S-------------------------S------------S--------
------------SS-SSSSSS---SSSS-SSS-SSSSSS--SSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSS------
--S-----------S------------------------S---S------------------S-----------------
---------S---S-----------S-S-------------------------------------S---S----------
----S-------------S--------S-----------------------------S----------------------
-----S-SS-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SS---S---------S---------------------S---SSSSSS--SSSS----------S-S------
----------------------SS-S-SSSSSSSSSSSSS-----------------------------S----------
-------------S---S-SSSS-SSS--------------------------------------SSS------------
---S----------------------------------------------------------------------------
----S----------S------------------------------------------------------------
>forward_545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AGCTTGGCTGCCATTAGGAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2567
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACACAAGGCGAAGAAGGCTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_2231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAGAGGGCCCAGTTGAAACT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3575
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCCAAAGTGCCAAGAGCTAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
