>input_sequence_53431
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----------------------------------------------------------------------ATGAGCGGCG
G------AGCGGG------GGCGGCGGCGGCGGTGAGCAGGTTCATCAAGTGCGTGGCCGTGGGCGACGGCGCCGTGGGC
AAGACCTGCATGCTCATCTGCTACACCTGCAACAAGTTCCCCACCGTTGAGTACCACCACTCTCCCTCTCCCTCTCCCTT
CTTGGCCTGGCTAGCTTGATCTGGTTTCATTCTGACGAAATGGCTGCTCCTGTTGATGCGGGGGTGGATGCAGGACTACA
TCCCCACAGTGTTCGACAACTTCAGCGCCAATGTCTCCGTGGACGGCAGCATCGTCAACCTCGGCCTCTGGGACACCGCA
GGTC---------------TCCTTCTCTTCTTCCTCCACTCCCCGTCCCCGATGTGGGGTGTTTTTCTTCC---------
-TGTAATGGTGGTCCGTCTTGGGTTGCTGCAGGTCAGGAGGATTACAGCAGGCTGAGGCCTCTGAGCTACAGGGGAGCCG
ATGTCTTCATCCTCTCCTTCTCCCTCACCAGCAGAGCAAGCTATGAGAATGTGCACAAGAAGGTACACTCACTCACATTG
TGTTGCTCTTCTGAACAGGCGCATTGAGATTACTAACGGCCTGCCTTCAATTTGTTC-TGCGCAGTGGATGCCGGAGCTT
CGCCGGTACGCCCCCGGCATTCCTGTACTACTTGTTGGAACCAAGTTGGGTATGCTCTTGAGCTCCTTCTACAGATTTTT
AGTTGGATGCCATTCAAATCCACACATTTTGGTGTGCTATCCAGTAGTGCATGTGTGTCTTTGGCTGCTCTTGAGCCATC
AATTTCCCGTATAAATGCGCAGATCTCCGAGAAGATAGAGCATATCTTGCTGATCATGCAGCTGATTCCATCATAACAAC
TGAGCAGGTTTATGCCTTTTACACTCGGATGACAGCAACCAGCTTGGCATTTTGAAATGATACTAGTACCAAATTAACTT
TCCACATGT--TAGGGTGAGGAGCTTCGGAGACAAATAGGTGCGGTGGCATACATAGAATGCAGCTCCAAGACACAAAGG
GTATGGCTTCTGCTGCATCCAAACAATAAAAAGCCCTGGGATTTCAAAGAGTTCTAGTACACATGTCTAAAAACATTCTC
TCTTTTTTTCCCTTGATTGATAATTGTCGACAGAACATTAAGGCTGTTTTCGACACCGCAATCAAGGCAGTTCTTCAACC
TCAAAGGCACAAGGAGGTAGCCAGAAAGGAAATTCGGACTCGCTCTAGTCGGTCAGTAAGGTAGGGTTCAAGTTTATGCT
ATTTTCTCAAACCAATCACCGGTCGTTTCGAACAAAATTCTCGACATCTTGATTTCCATTCACGTCCCCGCTTCATTTTG
TAGGCGCTACTTCTGCGGGAGTGTTTGCTTAGCATAG-------------------------------------------
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>chr3D_1_TraesCS3D01G161900
TCATTTGGACTCCGTTTGATATTCCTTTTCTGTAAAACTCAAAAACAAAGGAAAAACAGAAACTTGCACTGGGCTCTAGG
TTAATAGGTTAGTCCCAAAAATCATATAAAATATCATATAAATGCATATAAAACATCCAAGATAAATAATATAATATTAT
GAATACTTTATAAATTATAGATACGTTGGAGACGTATCAGACCGGTGTCGGTCAAAGGCGCCTTGGCGGACGGCACGGCG
ACGTGCAAATGTGGCGCTTAACGGCCCGACGTGAATGAGTCCGACGACGAAATAAGTTTTTGAGGGGTCAGTGGACGAAA
TAAGTACGTCCAGGGATCATTTAGTAAAAATAATA---------------------------------------------
-------------------------------------------------------------CCATACCACCCGTGCTGTC
CGTGCATTCTACTCCCTCCGTTTCTAAATATTTGTCTTTTTAGGGATTTCAACAAATGACTACATACGAAGTCAAATGAG
TGAATCTATGCTCTAAAATATGTCTATATACATTCATATGTTGTGTCCATGATGTCCATTTAAAATCTCTAAAATGACAA
ATATTTAGGAACGGAGAGAGCAGATTGTAACGGGGATAGGATAG-GAGATCCAAACCTGAAAACAAATCATGATTAGGCA
GAGACGCGTTGAGAGTGAGGGGCCACGTGCACCGCAGTTCTTTTACCATTAAAAGCAGAATCTTGGCACGGCAGCCCGGG
TTCAAATGTACTTCCTCCGTTCCTAAATATAAGTTTTTTTAGACATTTCAAATGGACTGTACGTAGACATATTTTAGAAT
GTAGATTCATTCATTTTACTCCATGCGTAGTCATTTGTTGAAACTTATATTTAAGAACGGAGGGAGTAGCAGTAAAAA-G
TCCTCC--TTCTGGGAGACCCACCCACTGATGTTATGTAGCAGCAGTGCTTTCACTGGAGCAAGCATCCAGACGCACTCC
AGAGACAGAGACAGAGAGGGAGAGGCTGTGGCTGACTGGGTGTGGCTGGAGAGAAGAGGAGAGGAGAGACATGAGCGGCG
G------AGCGGG------GGCGGCGGCGGCGGTGAGCAGGTTCATCAAGTGCGTGGCCGTGGGCGACGGCGCCGTGGGC
AAGACCTGCATGCTCATCTGCTACACCTGCAACAAGTTCCCCACCGTTGAGTACCACCACTCTCCCTCTCCCTCTCCCTT
CTTGGCCTGGCTAGCTTGATCTGGTTTCATTCTGACGAAATGGCTGCTCCTGTTGATGCGGGGGTGGATGCAGGACTACA
TCCCCACAGTGTTCGACAACTTCAGCGCCAATGTCTCCGTGGACGGCAGCATCGTCAACCTCGGCCTCTGGGACACCGCA
GGTC---------------TCCTTCTCTTCTTCCTCCACTCCCCGTCCCCGATGTGGGGTGTTTTTCTTCC---------
-TGTAATGGTGGTCCGTCTTGGGTTGCTGCAGGTCAGGAGGATTACAGCAGGCTGAGGCCTCTGAGCTACAGGGGAGCCG
ATGTCTTCATCCTCTCCTTCTCCCTCACCAGCAGAGCAAGCTATGAGAATGTGCACAAGAAGGTACACTCACTCACATTG
TGTTGCTCTTCTGAACAGGCGCATTGAGATTACTAACGGCCTGCCTTCAATTTGTTC-TGCGCAGTGGATGCCGGAGCTT
CGCCGGTACGCCCCCGGCATTCCTGTACTACTTGTTGGAACCAAGTTGGGTATGCTCTTGAGCTCCTTCTACAGATTTTT
AGTTGGATGCCATTCAAATCCACACATTTTGGTGTGCTATCCAGTAGTGCATGTGTGTCTTTGGCTGCTCTTGAGCCATC
AATTTCCCGTATAAATGCGCAGATCTCCGAGAAGATAGAGCATATCTTGCTGATCATGCAGCTGATTCCATCATAACAAC
TGAGCAGGTTTATGCCTTTTACACTCGGATGACAGCAACCAGCTTGGCATTTTGAAATGATACTAGTACCAAATTAACTT
TCCACATGT--TAGGGTGAGGAGCTTCGGAGACAAATAGGTGCGGTGGCATACATAGAATGCAGCTCCAAGACACAAAGG
GTATGGCTTCTGCTGCATCCAAACAATAAAAAGCCCTGGGATTTCAAAGAGTTCTAGTACACATGTCTAAAAACATTCTC
TCTTTTTTTCCCTTGATTGATAATTGTCGACAGAACATTAAGGCTGTTTTCGACACCGCAATCAAGGCAGTTCTTCAACC
TCAAAGGCACAAGGAGGTAGCCAGAAAGGAAATTCGGACTCGCTCTAGTCGGTCAGTAAGGTAGGGTTCAAGTTTATGCT
ATTTTCTCAAACCAATCACCGGTCGTTTCGAACAAAATTCTCGACATCTTGATTTCCATTCACGTCCCCGCTTCATTTTG
TAGGCGCTACTTCTGCGGGAGTGTTTGCTTAGCATAGTCGAGAACAACATTGTGGGGTCTTTCCTCGAC-----------
----------------------ATGGGATAGACAGTGATGGTAGAAGCATCTCATTGCTAGCACCTAGACGGAACTACTA
GTTCTCTCGTGCACTGTGGTGTGGACCGTGGAGCACCCTGAATCCTTGATGATGTAAGATAGGC-----ATCAAGTTTTG
CCTCTGTAATAAGGCATGCTCTTGTGGATGATCAAATTTGAAATCTCCCACTCCTTGGGCAGGCTTGAAAATCTCAGGGT
AATATGCACAAACAAGATAATCTCGTT-GTCTAACAAGGTTTCTGCCTATTTTCCCCGCAAAAAAAAAAGGTTTCTGCCT
A-TTTTACCATTTTGTTTAACAAATTAAAAAAGGCACTTCCGTGGCTATTTTTTCAACACCCCAAAACAAGTCCAGCACA
ACTTAGTTTTTCTAGTA--CAAACTTAACCTAAATAAAGAGAAAAACACAACTGGAACAATAGTGGAAACAACCTCCTGA
CGCCTAGAGTAACTCTATTCAACAAAACGAACGGAAATCATATCCGGTCGAATCATCGTCCTTCTCGGCGTGATATACAA
ATCAGTGGTATGCATGCTTTAACAGAGTTAAATTTCACTCAAAAATATCTAATGAAATTATATTCAACAGAATCATCAGT
ATAATATGCCACCAGCAGGACAAGCAACAAGACAATTGTATGATTAATGAGTCACACAAAGTATAATCTTCTTAAATATT
GGACTGAACCATCCTTCATGACTTACGAGTAAAACTACGGCGGCAGTAGTTTACAACATCTTACAGCTATAACCATTCAG
CAAACATTACCACTGACAAACCATCCTTTAGAAGTAAGCGACTGCAATTCGATAGTTTACAACATCTGGCAGCTAGAAGT
AATCTGCCGATATTACCACCACTAACCATCCTTGGCACCAGTCACAACAATTGTAAACAAAAATAATGTTAATCACACAA
TAGGCAAGCCCTAAAATCAAAAGCTTACACACTTTCTCT
>chr3A_209
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CGGTCAAAGGCGCCTTGGCGGACGGCACGGGA
CGTGTAAGT--TGGTGCCTAACGGCCCGGCGCGAATGGGTCAGACGACGAAATAAGTTTTTGAGGGGTCAGTGGGCGAAA
TAAGTACGTCCAGTGATCATTTAGTAAAAATAATACTCCCTCTGTTCACTTTTATAAGACCTTGAAGACATTTCAGACAA
TGTGTAAAACAGCCTATTTTGAGCTGTCTGAAAGAACTTACAAAAGTGAACGGAGGGTGTACCATACCACCCGTGCCGTC
CGTGCATTCTAGATTTGTAATG----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GGCGATAGGATAGAGAGATCCAAACCTGAAAACAAATCATGATTAGTCA
GAGACGCGTTGAGAGTGAGGGGCCACGTGCACCGCAGTTCGTTTACCATTAAAAGCAGAATCTTGGCATGGCAGCCCGGG
TTCAAATGTA----------------------------------------------------------------------
--------------------------------------------------------------------GTTGTAAAAAGG
TCCTCC--TTCTGGGAGACCCACCCACTGATGTTATGTAGCAGCAGTGCTTTCACTGGAGCAAGCATCCAGACTCACTCC
AGAGACAGAGACAGAGAGGGAGAGGCTGTGGCTGACTGGGTGTGGCTGGAGAGGAGAGGAGAGGAGAGACATGAGCGGCG
GAGCGGCAGCGGG------GGCGGCGGCGGCGGTGAGCAGGTTCATCAAGTGCGTGGCCGTGGGCGACGGCGCCGTGGGC
AAGACCTGCATGCTCATCTGCTACACCTGCAACAAGTTCCCCACCGTTGAGTACCACCCCTCTCCCTCTCCCTCTCCCTT
CTTGGCCTGGCTAGCTTGATCTGGTTTCATTCTGACGAAATGGCTGCTCCTGTTGATGCGGGGGTGGATGCAGGACTACA
TCCCCACCGTGTTCGACAACTTCAGCGCCAATGTCTCCGTGGACGGCAGCATCGTCAACCTCGGCCTCTGGGACACCGCA
GGTCGGGCTCCCGTCCGGCTCCCTCTCTTTTTCCTCCACTCCCCGTACCCGATGCGGAGTGTTTTCCTTCCCGTAATGCC
ATGTAATGGTGGTCCGTCCTGGGT---TGCAGGTCAGGAGGATTACAGCAGGCTGAGGCCTCTGAGCTACAGGGGAGCCG
ATGTCTTCATCCTCTCCTTCTCCCTCACCAGCAGAGCAAGCTATGAGAATGTGCACAAGAAGGTACACTCACTCACATTG
TGTTGCTCTTCTGAACAGGCGCATTGAGATTACTAACGGCCTGCCTTCAATTTGTTC-TGCGCAGTGGATGCCGGAGCTT
CGCCGGTACGCCCCCGGCATTCCTGTACTACTTGTTGGAACCAAGTTGGGTATGCTCTTGAGCTTCTTCTACAGATTTTT
AGTTGGATGCCATTCAAATCCACACATTTTGGTGTGCTATCCAGTAATGCATGTATGTCTTTGGCCGCTCTTGAGCCATC
GATTTCCCATATAAATGTGCAGATCTCCGAGAAGATAGAGCTTATCTTGCTGATCATGCAGCTGATTCCATAATAACAAC
TGAGCAGGTTTGTGCCTTTTACACTCGGATGACAGCAACCAGCTTGGCATTTTGAAATGATAC---TACCAAATTAACTT
TCCACATGTTTTAGGGTGAGGAGCTTCGGAGACAAATAGGTGCGGTGGCATACATAGAATGCAGCTCCAAGACACAAAGG
GTATGGCTTCTGCTGCATCCAAACAATAAAAGGCCCTGGGATTTCAAAGAGTTCTAGTACATATGTCTAAAAACATTCTC
TCTCTTTTTCCC----TTGATAATTGTTGACAGAACATTAAGGCTGTTTTCGACACCGCAATCAAGGCAGTCCTTCAACC
TCAAAGGCACAAGGAGGTAGCCAGAAAGGAAATTCGGACTCGCTCTAGTCGGTCAGTAAGGTAGGGTTCAAGTTTATGCT
ATTTTCTCAAACCAATCACCGGTCGTTTTGAACAAATTTCTCGACATCTTGATTTCCGTTCACGTCCCCGCTTCATTTTG
TAGGCGGTACTTCTGCGGGAGTGTTTGCTTAGCATAGTCGAGAACAACATTGTGGCGTCTTTCCTCGACATGATGCTCAG
ATGGCGCGCGGTTGTTCTCGAAATGGGACAGACAGTGATGGTAGAAGCATCTCATTGCTAGCAGCTAGACGGAACTCCTA
GTTCTCTCGTGCACTGTGGTGTGGACTGTGGAGCACCCTGAATCCTTGATGATGTAAGATAGGC-----ATCAAGTTTTG
CCTCTGTAATAAGGCATGCTCTTGTGGATGAACAAATTTGAAATATCCCACTCCTTGGGCAGGCTTGAAAATCTCAGGGT
AATATGCACAAACAAGATAATCTCGTTTG-CTAACAAGGTTTCTGCCTATTTTCCCAGCAAAAAAAAAAGGTTTCTGCCT
A-CTTTACCATTTTGTTTAACAAATTAAAAAAGGCACTTCCGTGGCTATTTTTTCAACAGCCAAAAACAAGTCCAGCACA
ACGTAGTTTTTCTAGTA--AAAACTCAACCTAAATAAAGAGAAAAACACAACTGGAACAATAGTGGGAACAACCTCCTGA
CGCCTAGAGTAACT--ATTCAACAAAACGAACGGAAATCATATCCGGTCGAATCATCGTCCTTCTCGGCATGATATCCAA
ATCACTGGTATGCCTGCTTTAACAGAGTTAAATTTCACTCAAAAATATCTAATGAAATTATATTCAACAGAATCATCAGT
ATAACATGCCACCAGCAGGACAAGCAACAAGACAATTGTGTGATTAATGAGTCACAC--AGTATAATCTTCTTAAATATT
GGACTGAACCATCCTTCATGACTTAAGAGTAAAACTACGGCGGCAGTAGTTTACAACATCTTACAGCTATAACCATTCAG
CAAACATTACCACTGACAAACCATCCTTTAGAAGTAAGCGACTGCAATTCGATAGTTTACAACATCTGGCAGCTAAAAGT
AATCTGCCGATATTACCACCACTAACCATCCTTTGCACCAGTCACAACAGTTGTAAACAAAAATAATGTTAATCACACAA
TAGGCAAGCCCTAAAATCAAAAGCTTACACACTTTCTCT
>chr3B_552
GAGTAGATTGT---------------------------------------------------------------------
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-----------------------------ACGGGGATAGGATAG-GAGATCCAAACCTGAAAATAAATCATGATTAGTCA
GAGACGCGTTGAGAGTTAGGGGCCACGTGCACCGCAGTTCGTTTACCATTAAAAGCAGAATCTTGGCACGGCAGCCCGGG
TTCAAATGTA----------------------------------------------------------------------
--------------------------------------------------------------------GCAGTAAAAAGG
TCCTCTGGTTCTGGGAGACCCACCCACTGATGTTATGTAGCAGCAGTGCTTTCACTGGAGCAAGCATCCAGACTCACCCC
AGAGACAGAGACAGAGAGGGAGAGGCTGTGGCTGACTGGGTGTGGCTG-----GAGACGAGAGGAGAGACATGAGCGGCG
GAGCGGGAGCGGGGGCGGCGGCGGCGGCGGCGGTGAGCAGGTTCATCAAGTGCGTGGCCGTGGGCGACGGCGCCGTGGGC
AAGACCTGCATGCTCATCTGCTACACCTGCAACAAGTTCCCCACCGTTGAGTACCACCA------CTCTCCCTCTCCCTT
CTTGGCCTGGCTAGCTTGATCTGGTTTCATTTTGACGAAATGGCTGCTCCTGTTGATGCGGGGTTGGATGCAGGACTACA
TCCCCACCGTGTTCGACAACTTCAGCGCCAATGTCTCCGTGGACGGCAGCATCGTCAACCTCGGCCTCTGGGACACCGCA
GGTC---------------TCCCTCTCTTCTTCCTCCACTCCCCGTCCCCGATGTGGGTGC-TTTTCTTCC---------
-TGTAATGGTGGTCCGTCTTGGGT---TGCAGGTCAGGAGGATTACAGCCGGCTGAGGCCTCTGAGCTACAGGGGAGCCG
ATGTCTTCATCCTCTCCTTCTCCCTCACCAGCAGAGCAAGCTATGAGAATGTGCACAAGAAGGTACACTCACTCACATTG
TGTTGCTCTTCTGAACAGGTGCATTGAGATTACTAACGGCCTGCCTTCAATTTGTTCCTGCGCAGTGGATGCCGGAGCTT
CGCCGGTACGCCCCCGGAATTCCTGTACTACTTGTTGGAACCAAGTTGGGTATGCTCTTGAGCTTCTTCTACAGATTTTT
AGTTGGATGCCATTCAAATCCACACATTTTGGTGTGCTATCCAGTAATGCATGTGTGTCTTTGGCTGCTCTTGAGCCATC
AATTTCC-GTATAAATGCGCAGATCTCCGAGAAGATAGAGCTTATCTTGCTGATCATGCAGCTGATTCCATCATAACAAC
TGAGCAGGTTTATGCCTTTTACACTCGGATGACAGCAACCAGCTTGGCATTTTGAAATGATACTAGTACCAAATTAACTT
TCCACATGT--TAGGGTGAGGAGCTTCGGAGACAAATAGGTGCGGTGGCATACATAGAATGCAGCTCCAAGACACAAAGA
GTATGGCTTCTGCTGCATCCGAACAATAAAAGGCCCTGGGATTTCAAAGAGTTCTAGTACATATGTCTAAAAACATTCTT
TCTTTTTTTCCC----TTGATAATTGTTGACAGAACATTAAGGCTGTCTTTGACACCGCAATCAAGGCGGTTCTTCAACC
TCAAAGGCACAAGGAGGTAGCCAAAAAGGAAATCCGGACTCGCTCTAGTCGGTCAGTAAGGTAGGGTTCAAGTTTATGCT
ATTTTCTCAAACCAATCACCGGTCGTTTTGAACAAAATTCTCGACATCTTGATTTCCATTCACGTCCCCGCTTCATTTTG
TAGGCGGTACTTCTGCGGGAGTGTTTGCTTAGCATAGTCGAGAACAACATTGTGGAGTCTTTCCTCGACATGATGCTCAG
ATGGCGCGTGGTTGTTCTCGAAATGGGATAGACAGTGATGGTAGAAGCATCTCATTACTAGCAGCTAGACGGAACTCCTA
GTTCTCTCGTGCACTGTGG-------TGTGGAGCACCTTGAATCCTTGATGATGTAAGATACAGTAGGTATCAAGTTTTG
CCTCTGTAATAAGGCATGCTCGTGTGGATGATCAAATTTCAAACCTCCCACTACTTGGGCAGGCTAGAAAATCTCAGGGT
AATATGCACAAACAAGATAATCTCGTTTGTCTAACAAGCTTTCTGCCTATTTTCCCTGCAAAAACAAA--GTTTCTGCCT
ATTTTTACCATTTTGTTTAACAAATTTAAAAAGGCACTTCCGTGGCTATTTTTTCAACACCCAAAAACAAGTCCAGCACA
ACTTAGTCTTTCTAGTACAAAAAGTCAACCTAAATGAAGAGAAAAACACAACTGGAACAATAGTGGAAACAACCTCCTGA
CGCCTAGAGTAACTCTATTCAACAAAACGAACGTAAATCATATCCGGCAGAATCATCATCCTTCTCAGCGTGATATCCAA
ATCAGTGGTATGCATGCTTGAACAGAGTTAAATTTCACTCAAAAATATCTAATGAAATTATATTCAACAGAATCATCAGT
ATAACATGCCACCAACAGGACAAGCAACAACACAATTGTATGATTAATGAGTCACACAAAGTATAATCTTCTTAAATATT
GGACTGAACCATCCTTCATGACTTAAGAGTAAAACTACGGCGGCAGTTGTTTACAACATCTTACAGCTATAACCATTCAG
CCAACATTACCACTGACAACCCATCCTTTAGAAGTAAGTGACTGCAATTCGATAGTTTACAACATCTGGCAGCTAGATGT
AATCTGCCGATATTACCACCACTAACCATCCTTTGCACCAGTCACAACATTTGTAAACAAAAATAATGTTAATCACACAA
TAGGCAAGCCCTAAAATCAAAAGCTTACTCACTTTCTCT
>SNPs
SSS-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------SS
SSSSSS-SSSS---S--S----------S--S-----S---S--------------------------------S-----
-------------S------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------SSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------S--
----------------------------------------S---------------------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
-------------------------------------------------------------------------S------
-----------------------------------------------------S--------------------------
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-------S------------------------------------------------------------------------
----------------------S---------------------------------------------------------
------------------------SSS-----------------------------------------------------
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----------------------------------------------------------------S---------------
----------------------------------------------S---------------------------------
-----------------------------------------S--------------------------------------
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-------------------------------S-----------------------------S------------------
------------SSSS-----------S----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
------S------------------------------------------------S------------------------
---------------------------------------------------------------S------------S---
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------S-----------------
-------------------S-----S------------------------------------------------------
----------------------------------------------------------------------------S---
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----S---------------------------------------------------------------------------
-------------------------S------------------------------------------------------
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---------------------------------S---------------S------------------------------
---------------------------------------
>forward_206
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--------------------------TGGAGACGTATCAGACCGGT----------------------------------
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>reverse_1887
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----------------------------------------------GTGCATGTGTGTCTTTGGCT--------------
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>forward_499
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-------------------------------------------------------------------------------C
CGTGCATTCTACTCCCTCC-------------------------------------------------------------
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>reverse_2536
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-------------------------------------------------------GGTCTTTCCTCGACATGGGA-----
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