>input_sequence_53406
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----------------------------------------------------------------------------ATGG
TCCACCAGGACGAAGGCTCCTCCTCGTCGGTCACCTCCTCCCCGCTGCACAACTTCTCCAACATGCCGCTCCACCCGCAC
CCTGGCGCGAACGGCGCCGGCGCAGGCGCCACG---------------CCGCCCTGGATGCTCCGGGAGCTCCGCTCCGA
CGAGCGCGGCCTCTGCCTCATCCACCTCCTGCTCAACTGCGCCGCCGCGGCCTCGGCCGGCCGGCTCGACGCCGCCAACG
CCGCGCTCGAGCACATCGCCACGCTCGCGGCGCCCGACGGGGACGCCATGCAGCGCGTCGCCGCGGCCTTCGCGGAGGCG
CTGGCCCGGCGCGCGCTCCGTGCGTGGCCCGGGCTGTGCCGCGCGCTGCTCCTGCCCCGCGCGGGCCCCACGCCCGCCGA
GGTCGCCGTCGCGCGCCGACACTTCTTGGACCTCTGCCCCTTCCTCCGCCTCGCCGGCGCGGCGGCCAACCAGGCGATCC
TCGAGGCCATGGAGTCGGAGAAGATCGTGCACGTCATCGACCTCGGCGGCGCCGACGCCACGCAGTGGCTCGAGCTGCTC
CACCTCCTCGCCGCGCGCCCCGAGGGCCCGCCGCACTTCCGCCTCACCGCCGTGCACGAGCACAAGGACCTGCTCTCGCA
GACGGCCATGGCGCTCACCAAGGAGGCGGAGCGGCTGGACGTGCCGTTCCAGTTCAACCCCGTGGTGTCCCGCCTGGACG
CGCTGGACGTTGAGTCCCTCCGCGTGAAGACCGGCGAGGCGCTGGCCATCAGCTCCAGCCTGCAGCTCCACCGCCTGCTC
GCCACCGACGACGACTCCATCCCCGCCGCAGCCGCGGCCGCCGACAAGGACCGGCGCAGGAAGAGCAGCCCGGACTCGTC
GGGGCTGCTGTCCCCGTCGACCTCCCGGGCCGACGCGTTCCTGGGGGCGCTGTGGGGGCTGTCGCCGAAGGTGATGGTGG
TGGCGGAGCAGGAGGCGAGCCACAACACGCCGGGGCTGACGGAGCGGTTCGTGGAGGCGCTCAACTACTACGCGGCGCTG
TTCGACTGCCTGGAGGTGGGCGCGGCGCGCGGGTCGGTGGAGCGCGCGCGCGTCGAGCGGTGGCTCCTGGGCGAGGAGAT
CAAGAACATCGTGGCCTGCGACGGCGCGGAGCGCCGCGAGCGGCACGAGCGGCTGGACCGGTGGGCGGCGCGCATGGAGG
GCGCC------------------------------------------------------------------------GGC
TTCGGGCGCGTGCCGCTGAGCTACTACGCGCTGCTGC-------------------------------------------
-----------------------------AGGCCCGGCGGGCGGCGCAGGGGCTCGGGTGCGACGGCTTCAAGGTCCGCG
AGGAGAAGGGCACCTTCTTCCTCTGCTGGCAGGACCGCGCCCTCTTCTCCGTCTCCGCATGGCGCGGCCGCCGCTTCGAC
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>chr3D_1_TraesCS3D01G482600
TGGCAAGGCTGACCGGCGGCAGCCTTGCCATTGATTCCCCGCAGGAAACCGAGGCGTTGGGGGAAGACGAGGCGCGGTGT
CGCTGACGTGGCTGGCCCGCGGCTCTTTCGCGCCAAAACCGCTCGCCAGTCGCCCAGCGCGCCGGGTTCGGGTTGGGTCC
GCCGGCGCTGATTTCGGCCCAGTCCAGCGAAAATCGGGCTCCTGATACGCGACTGGGCCGTTTTTTCGGCGTCGGCGCGA
AAAAATCGTCTAGGAAGGCCTTTCTGGGGCGCGGCTGGAGATGCTGTGACTCTGGGCTCCGTTGTGAATTACCGCTCTCA
GCTTCGCTCTCTCTCACCTTCTCCTGCTATATTTGCATCCTTTGCTGCACGGGGATCTGACGGAGGTGAGCATTTGTTTT
ATGGTTTTTCCTCTTACCATGGTATTTTCTCCAGAGAATGCTTTGCTCGCTGTGTTTTCCTGCCTGCCATGTTCCCCCCT
CTCTCTGCCACTACTACATTCAGTAAAGGCCCCTGAATACTGATGCATGCGTGCCCGACGAATGCATGCAGAAATAAATG
GCCCTGATTTCCCCTTTGTCCGCTCC-----TCGCTCTGACCAGA----------GTGAATTGTATTCTTGTTCCTCGAG
CCATTGCCTCTTGTTGCCGTCCTCTTGGACCTCTGCCGCTTGTTCCTCTCTGCTTGTTTCCTTCCCTT----------CC
CTGCCGTGTCCTCCCACTCCTCTCCTCTCTGCTTGGCCTACTCCTCCACACCCGTCTATTTAAGCCTGCTGCCTTGGTTT
GTTAATTGGATTTCTCCTTTGCAGTTTGCATCAGT--------AGCCT-TCCGCAGCGAGCCAACACCTCAGAG--ACGG
CCGCCGTATAAATCCTCCGTCATCCACCACGCCACGGCCGGCATCGGAGAGATAGATAGATAGATAGATAGACACGGAAA
GGAAGCAAGTTTGCTAGTAGCTTCGTGAGCCGAGCGGGATCGCCGAGCAGAGCGGGCGGCAGCGCTGGCGAGGCTGATGG
TCCACCAGGACGAAGGCTCCTCCTCGTCGGTCACCTCCTCCCCGCTGCACAACTTCTCCAACATGCCGCTCCACCCGCAC
CCTGGCGCGAACGGCGCCGGCGCAGGCGCCACG---------------CCGCCCTGGATGCTCCGGGAGCTCCGCTCCGA
CGAGCGCGGCCTCTGCCTCATCCACCTCCTGCTCAACTGCGCCGCCGCGGCCTCGGCCGGCCGGCTCGACGCCGCCAACG
CCGCGCTCGAGCACATCGCCACGCTCGCGGCGCCCGACGGGGACGCCATGCAGCGCGTCGCCGCGGCCTTCGCGGAGGCG
CTGGCCCGGCGCGCGCTCCGTGCGTGGCCCGGGCTGTGCCGCGCGCTGCTCCTGCCCCGCGCGGGCCCCACGCCCGCCGA
GGTCGCCGTCGCGCGCCGACACTTCTTGGACCTCTGCCCCTTCCTCCGCCTCGCCGGCGCGGCGGCCAACCAGGCGATCC
TCGAGGCCATGGAGTCGGAGAAGATCGTGCACGTCATCGACCTCGGCGGCGCCGACGCCACGCAGTGGCTCGAGCTGCTC
CACCTCCTCGCCGCGCGCCCCGAGGGCCCGCCGCACTTCCGCCTCACCGCCGTGCACGAGCACAAGGACCTGCTCTCGCA
GACGGCCATGGCGCTCACCAAGGAGGCGGAGCGGCTGGACGTGCCGTTCCAGTTCAACCCCGTGGTGTCCCGCCTGGACG
CGCTGGACGTTGAGTCCCTCCGCGTGAAGACCGGCGAGGCGCTGGCCATCAGCTCCAGCCTGCAGCTCCACCGCCTGCTC
GCCACCGACGACGACTCCATCCCCGCCGCAGCCGCGGCCGCCGACAAGGACCGGCGCAGGAAGAGCAGCCCGGACTCGTC
GGGGCTGCTGTCCCCGTCGACCTCCCGGGCCGACGCGTTCCTGGGGGCGCTGTGGGGGCTGTCGCCGAAGGTGATGGTGG
TGGCGGAGCAGGAGGCGAGCCACAACACGCCGGGGCTGACGGAGCGGTTCGTGGAGGCGCTCAACTACTACGCGGCGCTG
TTCGACTGCCTGGAGGTGGGCGCGGCGCGCGGGTCGGTGGAGCGCGCGCGCGTCGAGCGGTGGCTCCTGGGCGAGGAGAT
CAAGAACATCGTGGCCTGCGACGGCGCGGAGCGCCGCGAGCGGCACGAGCGGCTGGACCGGTGGGCGGCGCGCATGGAGG
GCGCC------------------------------------------------------------------------GGC
TTCGGGCGCGTGCCGCTGAGCTACTACGCGCTGCTGC-------------------------------------------
-----------------------------AGGCCCGGCGGGCGGCGCAGGGGCTCGGGTGCGACGGCTTCAAGGTCCGCG
AGGAGAAGGGCACCTTCTTCCTCTGCTGGCAGGACCGCGCCCTCTTCTCCGTCTCCGCATGGCGCGGCCGCCGCTTCGAC
TGACCGCCGGCCGGGC--------------GGACTCTGGATTCGATTTCACCGCTACTAGTACC---ACCACCCATGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATC---------GCATCTGAAATTCCATTTCTTCTTCTGATTGTTTTGTTTAGTAG
TACTATGTTATGTTGTAGACTGAACTTGGGGCATGCATATGCATGCGCTGCTTGTTTTGGGCTGAACTT-GCTGCATGCG
TACGCATGCCATGGGTGTGTGTCTGT----TCATAGTACTCCATA----------GTGTGCGTGCCTTCCCG-TTTTGGT
TCGGATTAGTGCATAGATTTTGGCAGGGATGATGAAGTGATCGATCTATGC----------GGATTGACGGGTTGGATCG
CTTGGTGGTTTATCTATC--TA--ACTGTCTATGT-TTGATCTTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----A
ATCGAA-----CCCAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCGATCAGTTCCTGACGAGTT
ACGTAAGGCTAATTGTGAGCCGAATGACTGACAAGAGGGCTGATTGAAAACTTTCTGGTCATCGAAAGAAAGAAGGCGAT
TACGGGACGCCAGCTGATGCCTCGTGTCGAATTCAACAATT---TCGTCTTCTTGACTTTGTTGAAATC----TAATTGT
CGGGGTAAGGGGAGAAATTGCTGGC-----TTGTCTGAACGACTGAACTTTCAGGGCAC----TGCACCTCTGGGGAGCT
TCCGCTACGTTTTGCCATTCACGCTTGATTTTTCAGAGAAAAGTAGTATAGATAGATGTAAAACATGCTGAACCGTCCTT
GTCGATGGCTCATCCGAAACTGATCGTGCCGGGCAC--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATATTTTGACAAGTGTGCGATGT
TATCAGCTATCACGAGCCATCTTTGAGCTGGACACGAGCATAGCATGGCACTGTTCTCCAATTAGTGCACCGCACAGTGG
AGGAGTAGCA----TCTATGCTTTGGTTCCCCGTCTTGTCC----ATGGACACAAGGCAACACGTGGCGATGGCACCGTC
CGTTGGATCCCACGCAGCCA
>chr3B_523
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------ATGCATACATGCCCGACGAGCGCGTGCAGAAATAATAG
GCCCTGATTTCCCCTTTGTCCGCTCCGCTCCTCGCTCTGACCCGA----------GTGAATTGTATTCTTGTTCCTCGAG
CCATTGCCCCTTGTTGCCGTCCTCTTGGACCTCTGCCCTTTGTTCCTCTCTGCTTGTCTCCTTCTCTTCCCTGCCCTGCC
CTGCCGTGTCCTCCCGCTCCTCTCCG-TCTGCTTGGC---CTGCTCCACACCCGTCTATTTAAGCCTGCTGTCTCGGTTT
GTTAATTGGATTTCTCCTTTGCG-------CCACGCAGCACGCAGCCT-TCCGCAGCGAGCCAAAACCTCTGAGCCACGG
CCACCGTATAAATCGTCCGTCGTCCACCACGCGACGGCCGGCATCGGAGAGATAGATAGATAGATAGATAGACACGGAAA
CGAAGCGACTTTGCTACTAGCTTCGTGAACCGAGCGGCATCGCCGAGCAGAGCGGGCGGCAGCGCTGGCCAGGCTGATGG
TCCACCAGGACGAAGGCTCCTCCTCGTCGGTCACGTCCTCCCCGCTGCAGAACTTCTCAAACATGCCGCTCCACCCGCAC
CCGGGAGCC---------------GGCGCCGCGGGCGCCGGCGCCACGCCGCCCTGGATGCTCCGGGAGCTCCGCTCCGA
CGAGCGCGGCCTCTGCCTCATCCACCTCCTGCTCAACTGCGCCGCCGCGGCGTCGTCCGGCCGGCTCGACGCCGCCAACG
CCGCGCTCGAGCACATCGCCACGCTCGCCGCGCCCGACGGCGACGCCATGCAGCGCGTCGCGGCCGCCTTCGCGGAGGCG
CTGGCCCGGCGCGCGCTCCGTGCGTGGCCCGGGCTGTGCCGGGCGCTGCTCCTGCCCCGCGCGGGCCCCACGCCGGCCGA
GGTCGCCGTCGCGCGCAGGCACTTCTTCGACCTCTGCCCCTTCCTCCGCCTCGCCGGCGCAGCGGCCAACCAGGCGATCC
TCGAGGCCATGGAGTCGGAGAAGATCGTGCACGTCATCGACCTCGGCGGCGCCGACGCCACGCAGTGGCTCGAGCTGCTC
CACCTCCTCGCCGCGCGTCCCGAGGGCCCGCCGCACTTCCGCCTCACCGCCGTGCACGAGCACAAGGACCTGCTCTCGAA
GACGGCCATGGCGCTCACCAAGGAGGCGGAGCGGCTGGACGTGCCGTTCCAGTTCAACCCCGTGGTGTCCCGCCTGGACG
CGCTGGACGTGGAGTCCCTCCGCGTGAAGACCGGCGAGGCGCTGGCCATCAGCTCCAGCCTGCAGCTCCACCGCCTGCTC
GCCACCGACGACGACA------CCCCCGCCGCCCCGACCGCCGACAAGGAGCGGCGCAGGAAGAGCAGCCCGGACTCCTC
CGGGCTGCTGTCCCCGTCCACCTCGCGGGCGGACGCGTTCCTGGGCGCGCTGTGGGGGCTGTCGCCCAAGGTGATGGTGG
TGGCGGAGCAGGAGGCGAGCCACAACACGCCGGGGCTGACGGAGCGGTTCGTGGAGGCGCTCAACTACTACGCGGCGCTG
TTCGACTGCCTGGAGGTGGGCGCGGCGCGCGGGTCGGTGGAGCGCGCGCGCGTCGAGCGGTGGCTCCTGGGCGAGGAGAT
CAAGAACATCGTGGCCTGCGACGGCGCGGAGCGCCGCGAGCGGCACGAGCGGCTGGACCGGTGGGCGGCGCGCATGGAGG
GCGCC------------------------------------------------------------------------GGC
TTCGGCCGCGTGCCCCTCAGCTACTACGCGCTGCTGC-------------------------------------------
-----------------------------AGGCCCGGCGGGCGGCGCAGGGGCTGGGGTGCGACGGCTTCAAGGTACGCG
AGGAGAAGGGCACCTTCTTCCTGTGCTGGCAGGAGCGCGCCCTCTTCTCCGTCTCCGCCTGGCGCGGCCGCCGCTTCGAC
TGACCGCCGGCCCTG--------------------------TCGATGTCACCACTACTAGTACCACCACAACCCATGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATCTTCATCATCACATCTAAAATTCCATTTCTTCTTCGGATTGTTTTGTTTAG---
--------TTTGTTGTAGACTGAACTTGGGGCATGCATATGCATGCGCTGCTTGTTTTGGACCAAACTT-GCTGCATGCG
TACGCATGCTCC----GTGTGTCTGT----CCATACTGCTCGTGTGTGTGTGTGTGTGTGTGTCCCTTCCCC-TGTTGGT
TCGGATCAGTGCACAGATTTCAGCAGGAATGATGAAGTGGTCGATCCATGC----------GGA--------TTGGATCG
TCTGGTGGTTTATCTATC--TA--TCTAACTGTCAATCTATATTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCGATCGA
ATCCT-TCGTGCCTAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCAAATC-----------GTT
AGGTAAGGCTAATTGTGAGCCGCATGACTCACAAGACGGCTGATTGAGAACTTTGTTTTCATC----GAAAGAAGGTGAT
TACGGGACGCCAGTTGATGCCTCTGGTCGGATCCAACGCTT---ACGTCTTGTTAACTTTGTTGAAATCTACGTAATTGT
CGGGTTAAGGGGAGAAATTTGTTGCTTGCGTTGTCTGAACGACTGAACTTTCAGGGCACGTACTGCACCTCTGGGGACCT
TCCGCTATGTTTCCAG-TTCACGCATGATTTTTCATACTACTTTT-------TAGATGTAAAACATGCTGAGCCGTCCTT
GTCGATGGCTCATCCAAAACTGATCCTGCTGGCTGGGCATACG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TATATTTTGACAAGTGTGCGATGG
TATCGGC--TCACGAGCCATCTTGGAGCTGGAGTGGACACGAGCATGCCACTGTTCTCCAATTAGTGCACTGCACAGTGG
AGGAGTTGCA----TCTATGCTTTGGTTCCCCGTCTTGTCCGTCCTTGTGCACAAGGCAACAGGTGGCCATGG-------
--------------------
>chr3A_524
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGCATGCATGCCCGACGAGTGCATGCAGAAATAAATG
GCCCCGATTTTCCCTTTGTCCGCTCCGCTCCTCGCTCTGACCTGACGGGGACGGGGTGAACTGTATCCTTGCTCCTCGCG
CCATTGCCCCTTGTTGCAGTCCTCTCGGACCTCTGCCCTTTGTTCCTCTCTGCTTGTCTCCTTCTCCT----------CC
CTGCCGTGTCCTCCCACTCCTCTC-----TGCCTGGC---CTCCTCCACCCCCGTCTATTTAAGCCTCCTGCCTTGGTTT
GTTCATTGGATTTCCCCTTTGCAGTTTGCACCACGCAGCAGCCACCCGCTCCGCAGCGAGCCAAAACCTCAGAG--ACG-
CCGCCGTATAAATCCTCCGTCGTCCACCACGCCACGGCCGGCATCG------------GAGAGATAGATAGACACGGAAA
GGAAGCGACTTTGCTGGTAGCTTCGTGAGCCGAGCGGGAACGCCGAGCGGAGCGGGCGGCAGCGCTGGCGAGGCTGATGG
TCCACCAGGACGAAGGCTCCTCCTCGTCGGTCACCTCCTCCCCGCTCCAGAACTTCTCCAACATGCCGCTCCACCCGCAC
CCTGGCGCC---------------GGCGCCACG---------------CCGCCCTGGATGCTCCGGGAGCTCCGCTCCGA
CGAGCGCGGCCTCTGCCTCATCCACCTCCTGCTCAACTGCGCCGCCGCCGCCTCCGCCGGCCGGCTCGACGCCGCCAACG
CCGCGCTCGAGCACATCGCGACCCTGGCCGCGCCCGACGGCGACGCCATGCAGCGCGTCGCCGCCGCCTTCGCGGAGGCG
CTGGCCCGGCGCGCGCTCCGTGCGTGGCCCGGCCTCTGCCGGGCGCTGCTCCTGCCCCGCGCGGGCCCCACGCCGGCCGA
GGTCGCCGTCGCGCGTCGCCACTTCCTCGACCTCTGCCCCTTCCTCCGCCTCGCCGGGGCAGCTGCCAACCAGGCGATCC
TCGAGGCGATGGAGTCGGAGAAGATCGTCCACGTCATCGACCTCGGCGGCGCCGACTCCACGCAGTGGCTCGAGCTGCTC
CACCTCCTCGCCGCGCGCCCCGAGGGCCCGCCCCACTTCCGCCTCACCGCCGTGCACGAGCACAAGGACCTGCTCTCGCA
GACGGCCATGGCGCTCACCAAGGAGGCGGAGCGGCTGGACGTGCCGTTCCAGTTCAACCCGGTGGTGTCCCGCCTGGACG
CGCTGGACGTGGAGTCCCTCCGCGTGAAGACCGGCGAGGCGCTGGCCATCAGCTCCAGCCTGCAGCTCCACCGCCTGCTC
GCCACCGACGACGACA------CCTCCTCCGCCGCCCCAGCCGACAAGGAGCGGCGTCG---GAGCAGCCCGGACTCGTC
GGGGCTGCTGTCCCCGTCCACCTCGCGGGCGGACGCGTTCCTGGGCGCGCTGTGGGGGCTGTCGCCCAAGGTGATGGTGG
TTTGCGAGCAGGAGGCGAGCCACAACACGGCGGGGCTGACGGAGCGGTTCGTGGAGGCGCTCAACTACTACGCGGCGCTG
TTCGACTGCCTGGAGGTGGGCGCGGCGCGCGGGTCCGTGGAGCGCGCGCGCGTCGAGCGGTGGCTCCTGGGCGAGGAGAT
CAAGAACATCGTGGCCTGCGACGGCGCGGACCGCCGCGAGCGGCACGAGCGGCTGGACCGCTGGGCGGCGCGCATGGAGG
GCGCC------------------------------------------------------------------------GGC
TTCGGGCGCGTCCCGCTGAGCTACTACGCGCTGCTGC-------------------------------------------
-----------------------------AGGCCCGCCGGGCGGCGCAGGGGCTGGGCTGCGACGGCTTCAAGGTCCGCG
AGGAGAAGGGCACCTTCTTCCTGTGCTGGCAGGACCGCGCCCTCTTCTCCGTCTCCGCCTGGCGCGGCCGCCGCTTCGAC
TGACCGCCGGCCGGCCGGCCATGTCTGCCTGGACTCTGGGTTCGATTTCACCACTACTAGTAGT---ACCACCC-TGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATC---------GCGTCGAAAATTTCATTTCTTCTTCTGATTGTTTTGTTTAGTAC
TCC--TACTTTGTTGTAGACCGAACTTGGGGCATGCATATGCATGCGCTGCTTGTTTTGGGCTGAACTT-GCTGCATGCG
TACGCATGCCATGGGTGTGTGTCTGT----TGATAGTACT-----------------GTGTATGCCTTCCCG-TTTTGGT
TCGGATTAGTGCATAGATTTTGGTAGGAATGATGAAGTGATCTGCCGATTGATCATCGATTGGA--------TTGGATC-
----------------------------------T-TTGATCTTTCCG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCGATCGA
ATCGAATCGTGCCCAAGAGGGCAGGCTGCA-TTTG-GTGAAAAGGGGACAAACCCAGATGCGATCGGTTCCTGATGAGTT
AGGTAAAAGGC-TTGTGAGCCGAAC----------------GATTGAATGCTTTCTTGTCATCCAAAGAAAGAAGGCGAT
TGCGGGACGCCAGCTGATGCCTCGGGTCGAATTCAACGCTTTCGTCGTCGTCTTAACTTTGTTGAAATC----TAATTGA
CGGGTTAAGGGGAGAAATTTTTGGC-----TTGTCTGAACGACTGAACTTTCACG----GTCCTGCACCGCCGGGGAGCT
TGCGCTATGTTTCGG-ATTCACGCGTGATTTTTCATAGAAAATAGCATGTACAT-ATGTAAAACATGCTGAACTGTCCTC
GTCGATGGCTCATCCGGAACTGATGCTGCTGTGATGGCATATATTTTGGGTATGTCTAGGACACATGTAGATGTAACATT
CTAACCTAATAAGCATTATGTTTGTGGTCTATTTTTTTTGTCCTAGCTTTTTTTCTTTTGTTTTTTGTTGCTGCGTAGTT
ATTTTTGGGAGGTTAGATGTGACATCCTTAAAAAACATCTAGATGTGACAAACTGATATATTTTGACCGGTGTGCGATGG
TATCGGC--TCACGAGCCGTCTTTGAGCTGGACACGAGCATGGCC-----CTGTTCTCCAATTAGTGCACCGCACAGTGG
AGGAGTTGCACCTATCTATGCTTTGGTTCCTCGCCTTGTCA----TTGGACACAAGGCAACACGTGGCGATGGCATCGGC
CGTTGGATCCTAGGCAGCCA
>chr6B_1994
--------------------------------------------------------------------------------
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--------------------------------------------CGGTTTGTGGAGGCGCTCAACAACTACGCGGCGCTG
TTCGGCTGCCTGGAGATGGGCATGGCGCACGGGCCCGTGGAGCGT--GCGCGTCCAGCGGTGGCTCCTCGGCGAGGAGAT
CAAGAACATCATGGCCTGCGACAACGCGGAGCGCCGCGAGCGGCACGAGCGGTTGGACCGCTGGGTGGCGCGCATGGAGG
GCGCCGACTTAGGGCGCGTCCTGCTGAGCTAATACGTGCTGCTGCAGGCGCGGCGGGCGGCACACATGGAGGGTGCCGGC
TTCGGGCGCGTCGCGCTGAGCTACTACGTGCTGCTGCAAGCGCGGCGGGAGGAGCGCATGGAGGGCACCGGCTTCTGGTG
CGTCCCGCTGAGCTACTACGCGCTCTTGCAGGCACGGCGGGCGGCGCAGGGGCTGGGCTGCGACGGCTTTAAGGTCCGCG
TGGAGAAGGGCACCTTCTTCCTGTGCTGGCAGGACCGCGCCCTCTTCTCCGTCTCCGCCTGGCGCCGCCGCCGCTTTGAC
TGACCGCCGGCCGGCCCTGTTGTT-----TGGACTCTGGATTCAATTTCACCACTACTAGTAGT---ACCACCCATGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATC---------ACATCCAA-----------TTCTTCTAATCATTTCGTTG-----
--G--TACTCTGTTGTAGACTAAAGTTGGGACTTGCATATGCATGCGCTGCTTGTTTTGGTCTGAACTT-GCTGCATGCG
TACGCATGCCATGGGTGTGTGTGTGTGTGTTCATAGTAGT-----------------GT-----CCTTCCCG-TTTTGGT
TCAGATTAGTGCATAGATTTTGGCAGGAATGATGAACT----TGCCGATTGATCATCAATTGGA--------TTGGATGG
TTTGGTGGTTTATCTATC--TA--ACTG----TGT-TTGATCTTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----G
ATCGAATCGAGCCCAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACC-AGATGCAATCAGGTCCTGATGAGAT
CAGTAAGGCTAATTGTGAGCCGAATGACTGACACAAGGGCTGATTGAAAGCTTTCATGTCATA----ATAAGAAGGCGAT
TACGGTACGCCAGCTGATGCCTCATGTCGAATTCAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr6B_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGGACCGTGCCCTGTTCTCCGTCTCCGCCTGGCACGGCCGCCGCTTCGAC
TGCCCGCCGGCCGGCCCTGTCCT-----ATGG--TCTGGATTCGATTTCACTACTACTGGTAAT---ACCACCCATGGAC
ATTAGCTAGCTAGCTAGGCATTTCATC---------ACATCCAAAATCTCATTTCTTCTTCTGATTGTTTCGTCG-----
--G--TACTCTATTGTAGACTGAATTTGGGG---------GCATGCCCTGCTTGTTTTGGACTGAACTT-GGGG---GCG
TACCCATGCCATGGGTGTGTGTCTGT----TCATAGCAGG-----------------GTGCATGCCTCCCCGTTTCTGGT
TCAGATTAGTGCATAGATTTTTGCAGGAATGATGAAGTGATCTGCCGATTGATCATCGATGGGAT-------TTGGATGG
TTTGGTGGTTTATTTTTCTATA--ACTG----TGT-TTGATCTTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----A
ATTGAATCGTGCCCAAGACAGCAGGTTGCATTTTG-GTGAAAAGGGGATAAACCCAGATGCAATTAGGTCCTGATGAGTT
CGGTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr6D_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGGACCGCGCCCTCTTCTCCGTCTCCACCTGGCGCGGCCGCCGCTTCAAC
TGCCCGCCGGCCGGCCCTGTCCT-----CTGGACTCTGGATTCGATTTCACCACTACTGGTAGT---ACTACCCATGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATC---------ACATCCGAAATTTCATTTCTTCTTTTGATTGTTTCGTTG-----
--C--TACTCTGTTGTAGACTGAATTTGGGG---------GCATGCGCTGCTTGTTTTGGACTGAACTTGGGGG---GCG
TACCCATGCCATGGGTGTGTGTCTGT----TCATAATAGG-----------------GTGCGTGCCTTCCCTTTTTTGGT
TCAGATTAGTGCATAGATTTTGGCAGGAAAGATGAAGTGATGTGCGGATTGATCATCGATTAGA--------TTGGATGG
TTTGGTGGTTTATCTATC--TA--ACTG----TGT-TCGATCTTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----G
ATCGAATCGTGCCCAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCAATCAGGTCCTGATGAGTT
CGGTAAGGCTAATTGTGAGCCGAATGACTGACACGAGGGCTGATTGAAAGCTTTCTTGTCATC----ATAAGAAGGCGAT
TACGGTACGCTAGTTGATGCCTCGGGACGAATTCAAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr4B_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGGACCCCGCCCTCTTCTCCGTCTTCGCCGAGCGTGGCCGCCGCTTCGAC
TGCCCGCCGACCGGCCCTGTCCT-----ATGGACTCTGGATTCGATTTCACCACTACTTGTAAT---ACCACCCATGGAC
ATTAGCTAGCTAGCTAGGTGTTTCATC---------ACATGCAAGATCTCATTTCTTCTTTTGATTGTTTCGTTG-----
--G--TACTCTGTTGTAGACTGAATTTGGGG---------GCATGCACTGCTTGTTTTGGACTGAACTT-GGTG---GCG
TACCCATGCCAGGGGTGTGTGTCTGT----TCATAGCAGG-----------------GTGCGTGCCTCCCCGTTTCTGGT
TCAAATTAGTGCATAGATTTTTGCAGGAATGATGAAGTGATCTGCCGATTGATGATGAATGGGAT-------TTGGATGG
TTTGGTGGTTTATCTATC--TATAACTA----TGT-TTGATATTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----A
ATCGAATCGTGCCCAAGAGTGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCAATTAGGTCCTGATGAGTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr4B_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------AGGACCACGCCCTGTTCTCCGTCTCCGCCTGGCGCGGCCGCCGCTTTGAC
TGCCCGCAGGTCGGCCCTGTCCT-----ATGG--TCTAGATTCGATTTCATCACTACTGGTAAT---ACCACCCATGGAC
ATTAGCTAGCTAGCTAGGCGTTTCATC---------ACATCTAAAATCTCATTTCTTCTTCTGATTGTTTCGTTG-----
--G--TGCTCTGTTCTAGACTGAATTTGGGG---------GCATGCCCTGCTTGTTTTGGACTAAACTT-TGGG---GCG
TACCCATGCCATGGGTGTGTGGCTGT----TCATAGCAGG-----------------GTGCGTACCTCCCCGTTTCTGGT
TCAGATTAGTGCATAGATTTTTGCAGGAATGATGAAGCGATCTGCCGATTGATCATCAATGGGAT-------TTGGATGG
TTTGGTGGTTTATTTTTCTGTA--ACTG----TGT-TTGATCTTTCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTC-----A
ATCGAATCGTGCCCAAGAGAGCAGGTTGCA-TTTTCGTGAAAAGGGGATAAACCGAGATGCAATCAGGTCCTGATGAGTT
CGGTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr6A_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------AGGACCGCGCCCTCTTCTCCGTCTCCGCCTGGCGCAGCCGCCGCTTCAAC
TGCCCGCCGGCCGGCCCTGTCCT-----CTGTCCTCTGGATTCGATTTCACCACTACTGGTAGT---ACTACCCATGGAC
ATTGGCTAGCTAGCTAGGCGTTTCATC---------ACATCCAAAATTTCATTTCTTCTTTTGATTGTTTCGTTG-----
--G--TACTACGTTGTAGACTGAATTTGGGG---------GCATGCGCTGCTTGTTTTGGACTGAACTT-GGGG---GCG
TACCCATGCCATGGGTGTGTGTCTGT----TCATAATAGG-----------------GTGCGTGCCTTCCCGTTTTTGGT
TCAGATTAGTGCATAGATTTTGGCAGGAAAGATGAAGTGATCTGCGGATTGATCATCGGTTAGA--------TTGGATGG
TTTGGTGGTTTATCTATC--TA--ACTG----TGT-TCGATCTTTCCATTTAGGGATGGCAATGGGTAAGGTATGGGCGG
GTACGACCTTTTTCTGCCCAAACCCATACCCAAATATTTTTTTCTATATCCATCCATTTCAATATCCATGGGCACAAATT
GGTACCCATGCCCATACCCATCAGGTATATTATACCCAATGGATATCCAATGGGTATAGTATCTAACATTGGCATGATAA
AGGTAAGCCAATAAAAGGGCCTAAAACTAAATTTAGGTACTCGGCCATCACAATCCGGTTTGCACTTACATCAAAATTTC
ACAATGTGGATTGACACACAAATGTCTTAATCTTCATTACAAACTAACTTAAAAAAACAAGTTTGCAAACTTGCAATGCC
AATCACCGTAGGTATTATAGGGTTTAATTTATTTATTAATTTTTCTGGGTATCCATTGGGATACCCATGGGTATAATTTC
ATACCCATACCCTACCCATGCATTTTGCGGGTATGGATACCCATTACCCATGGGTATGAAGTAGTAAAAAGTCTTATCCA
TGCCCACTGTTTTCGGGTAGGGTACCCGCGGGTACCCATATCCATGGGCAAAACTGCCATCCCTATTTCCATTC-----G
ATCGAATCGTGCTCAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCAATCAGGTCCTGATGAGTT
CGGTAAGGCTAATTGTGAGCCGAATGACTGACACGAGGGCTGATTGAAAGCTTTCTTGTCATC----ATAAGAAGGCGAT
TATGGTATGCCAGTTGATGCCTTAGGTCGAATTCAACACTT---------------------------------------
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>chr5A_2382
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------------------------------GGACTCTGGATTCGATTTCACCACTACTAGTAGT---ACCACAGGTGAAC
ATTAGCTACCTAGCTAGGCGTTTCATC---------ACATCCAAAATTCCATTTCTTCTTCTGATTATTTCATTG-----
--G--TACTCTGTTGTAGACTGAATTTGGGG---------GCATGCACTGCTTGTTTTGGATTGAACTT-GGGGCGTAC-
--CCCATGCCATGGGTGTGTGTCTTT----TCATTGTAGG-----------------GTGCGTGCCTTCCCGTTTTTGGT
TCAGATTAGTGCATAGATTTTGGCAGGAATGATGAAGTGATCTGCTGATTGATCATCGATTGGA--------TTGGATGG
TTTGGTGGTTTATCTGTC--TA--ACTG----TGT-TTGATC--------------------------------------
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-----------------------------------------------------------------TTTCCATTC-----G
ATCGAATCGTGCCCAAGAGGGCAGGTTGCA-TTTG-GTGAAAAGGGGATAAACCCAGATGCAATCAGGTCCTGATGAGTT
CGGTAAGGCTAATTGTGAGCCGAATGACTGGCACTAGGGCGGATTGAAAGCTTTCTTGTCATC----ATAAGAAGGCAAT
TACGGTATGCCAGCTGATGCCTCGGGTCGAATTCAACGCTTTC-------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S----------S------------------
------------------------------------------S-------------------------------------
--------S----------------------------SS------------------S------S---------------
-------------------------SS----------SSS----------------------------------------
------------------------------S--SS-----------------------------S---------------
---------------------S----------------------------------------------------------
------S-S-----------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------SSSSSSSSSSSSSSSS--------------------------------------------------------
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----------------------------S-----------S-----------------------S---------------
-----------------------------------------S--------------------------------S-----
------------------S--------S--------------------------------S-------------------
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----------S---------------------------------------------------------------------
---------------SSSSSSS--S----S------S-------------S-----------------------------
------------------S-----S-----S--------------S--------------------S-------------
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------------------------------------------------------S-------------------------
----------------------S-----------------------------------S---------------------
----------------------------------------------------S---------------------------
-------------------------------------------------------------------------------S
-S-SS--S------------------------------------------------------------------------
-----------------------------------------SSSS-----------------------------------
---------------------------S------------------S------------------SSSSSSS--------
S---------------------------S--S------------------------------------------------
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--------------------------------------------------------------------------S-----
-S------------------------------------------------------S------S----------------
--------------------------------------S---------------S-------------------------
----S--------------SS-----------------------------------------------------------
-------S----S-SS--------S----------S------S-SSSSSSSS----------------------------
-------------------------S---S---SSS--------------------------------------------
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-------------------------------------------------------------------------------S
----S--SS--------------------------------------S--------------------------------
------S--------------------------------------S-----------------------------S--S-
----------S-S-------
>forward_495
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---------------------------------------------------------------------------CCCCT
CTCTCTGCCACTACT-----------------------------------------------------------------
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>reverse_1459
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------------------ACACTTCTTGGACCTCTGCC------------------------------------------
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>forward_760
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--------------------TCTCCTCTCTGCTTGGCCTA----------------------------------------
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>reverse_2927
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----------------------------------------------TATGCGGATTGACGGGTTGG--------------
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--------------------
