>input_sequence_53384
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--------------------------------------ATGTCGCCGGCGGCGTGGACGAGGACGAGGAAGCTCCTCCTT
GGCCTTCCCCTGCTCGCAGGAAGAGGAAGAGGAAGCAGATCCGCTGGAGATGGCCGGTAAGCAACCATCCCTTCTCTTGT
TTGGTTTTCTTTCTTTCCAGCTCATGGACTGAAATCTCTTGTTTGGTTGGTCGGTTGGTTTCAGCTCCTCCTACTCG---
------------GCCGGTGCCGCCGGAGAGACGAGCCAGAAGAAGA---AGAAGAGGTCGACGGCAGTCCGGAAGGTGGT
GAGTATCGGGGCCATCAGCCTGGCCGGGGGAGTCGCCCTGAGTGCCATCAACGACCTCGCCATCTTCCACGGATGCACCA
GGTC---------TGCATCTGCATCTGCA-------------------------------------TCTGCTCTCTAGAA
TCAATTCAACATCTACACTAGTACATGATATAACTGCTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGCTCTGCTCCGCTGCCTAGATTCAACACTTTCTTTCACCTTTCTTCGAATTTACCTTACATGCCCAAGG
GGAGGGGAGAAATATATGTCTGTCAGTTTTAGCAACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTACATACATACATATATACAAATATTCATTTGCTGTTCCATGGCCATGCATATATCTATCTATGTAGCCTACCCCACT
ACACTCTGCTTTATACTACCACTAATCTTCTTCTTTGTATGTACCTCTAGTTAT--------------------------
GTTTGGACCTTTTTTGCACTTGGGGAAATTTAACATTTAAATT----------------------------ATATACATC
TTATTAAATCTTTCTTTCATTATTTTG---------------TTTGTATGATGATGATGATGATGATATGTGCCTACAAT
CCAGCAAGGCGATCGACAAGGCTAGCGAGAACCCAGAGGTCGTACAGGCGATCGGGGTGCCTATAGTTAGAGGCCCATGG
TACGATGCATCTGTCGTTTTGGGTCATCGGCGGCGATCCGTGTCATGCACGTTCCCTGTCACCGGCCCACGGGGTTCAGG
AGTGTTTCAGATCGAGGCCATCCGGAACGGAGGTTAGTCAACAGCTACTTGCTCGTGTCTTTCTTTCTTGACACTCATAC
ATAGATAGATATAT--GGCTGCCTCCTGGATTTCCTTCAGTATATATATATCCTGTTGATGTCTGCTTTATCTTGTCTTG
CGTTACTTGTGCATAAAGAGGATGGTGTGCTTTCCTTTCTGCGCCACCACGACTGGGAGATACTGGCCATGGATGCTCGC
CTGGAACTGCAGCTGGA---------ACTACCTTCAGATGATGGCGGTCAGGGTCAGCAACCAGTCGTGATGAACCTAAA
CCTGATGAGCAGCACTGCTGCTGCTGATGACGACGACAACTGTAAGATTAGTGGTACTGGTGGTGGTGAGGAAATCAGTT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr4D_1_TraesCS4D01G000400
CAAATTTCAGCTCCATCATCCCCTACTTTTTTTCTCGAGCAACCTCTTTTCTTTTTGTATGATTTGATTAGAAGAAGAAT
ACCCTTTTTTTTCCTTTTAAACCAGGCCGACCCAACTATTTGTCTCCCCCCCAAGCCGGCCCAAGGCCCATCCCCACTTC
CTGTGTCTTTGTGACTGAAACATCAGGAACGTAACAGATATTTCTTGGTTTCAACTTTGCGACATCAAAAGAGAAAGACT
AGAAAAGGAATTTATAGAACAAGAACATTTTTAAAGCGTATCAGCCGACCCGGCTTACGAATTTATACCAACTATCAAGG
AATTCCTAAAATTTTGGGTGGAATGGGAATTGCTATATACCCACGTGAATTTTGAAGAAATTAACTGCCGGTGTGGATCG
GAATATTATAGTATTTTTTTAA-AATGTTTCTTGAAATTCACAATAATTCTTTGAATTACCAAGTTTTTTTGACAGCCAC
GATATTTTTTT-GAAAATGTGGATTTTGCTTCAATTTGTGAATGAATTTTGAAAAAGAAACATTTGTCTTGCATTTGTGA
ACAAATTTTCAAAATAACGCGATGAGATGTGAACAAAATGTGGTCATCGCCGTTGAAGATTATGATTTTTTTTCTTTTG-
-TTGCAACACACGGGCCTTTTTGCTAGTAAGTAAATAAAAACATAAAGACGTTATTATGTTCTTTTTAATGAGCAGTCGA
AAAGAGGTGAAGTTGAACCTCTTTTAAATAACTTTAGCATATATACCAACAAAAGGAGTTAAGAGGGGCAAACTTCCAAA
TTACAGCATTAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TACGATGATGAC
GACGACTTCCAAATTTAGCATAAAAAAAGATAGCTTCCCCTGGGCCTTCTCAGAAAAAAA-------------AGATAGC
TTCCCCTGGGCTGGGCTGGGCC-----TGCCTGTCCGGCCCACCGAATGAAGGCCCGACCTGATCTTTTCAGTTCAGTTC
AGCCCACACCCACTAACCCTCCTCTTCCTCAGTCCTCAATGTCGCCGGCGGCGTGGACGAGGACGAGGAAGCTCCTCCTT
GGCCTTCCCCTGCTCGCAGGAAGAGGAAGAGGAAGCAGATCCGCTGGAGATGGCCGGTAAGCAACCATCCCTTCTCTTGT
TTGGTTTTCTTTCTTTCCAGCTCATGGACTGAAATCTCTTGTTTGGTTGGTCGGTTGGTTTCAGCTCCTCCTACTCG---
------------GCCGGTGCCGCCGGAGAGACGAGCCAGAAGAAGA---AGAAGAGGTCGACGGCAGTCCGGAAGGTGGT
GAGTATCGGGGCCATCAGCCTGGCCGGGGGAGTCGCCCTGAGTGCCATCAACGACCTCGCCATCTTCCACGGATGCACCA
GGTC---------TGCATCTGCATCTGCA-------------------------------------TCTGCTCTCTAGAA
TCAATTCAACATCTACACTAGTACATGATATAACTGCTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGCTCTGCTCCGCTGCCTAGATTCAACACTTTCTTTCACCTTTCTTCGAATTTACCTTACATGCCCAAGG
GGAGGGGAGAAATATATGTCTGTCAGTTTTAGCAACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTACATACATACATATATACAAATATTCATTTGCTGTTCCATGGCCATGCATATATCTATCTATGTAGCCTACCCCACT
ACACTCTGCTTTATACTACCACTAATCTTCTTCTTTGTATGTACCTCTAGTTAT--------------------------
GTTTGGACCTTTTTTGCACTTGGGGAAATTTAACATTTAAATT----------------------------ATATACATC
TTATTAAATCTTTCTTTCATTATTTTG---------------TTTGTATGATGATGATGATGATGATATGTGCCTACAAT
CCAGCAAGGCGATCGACAAGGCTAGCGAGAACCCAGAGGTCGTACAGGCGATCGGGGTGCCTATAGTTAGAGGCCCATGG
TACGATGCATCTGTCGTTTTGGGTCATCGGCGGCGATCCGTGTCATGCACGTTCCCTGTCACCGGCCCACGGGGTTCAGG
AGTGTTTCAGATCGAGGCCATCCGGAACGGAGGTTAGTCAACAGCTACTTGCTCGTGTCTTTCTTTCTTGACACTCATAC
ATAGATAGATATAT--GGCTGCCTCCTGGATTTCCTTCAGTATATATATATCCTGTTGATGTCTGCTTTATCTTGTCTTG
CGTTACTTGTGCATAAAGAGGATGGTGTGCTTTCCTTTCTGCGCCACCACGACTGGGAGATACTGGCCATGGATGCTCGC
CTGGAACTGCAGCTGGA---------ACTACCTTCAGATGATGGCGGTCAGGGTCAGCAACCAGTCGTGATGAACCTAAA
CCTGATGAGCAGCACTGCTGCTGCTGATGACGACGACAACTGTAAGATTAGTGGTACTGGTGGTGGTGAGGAAATCAGTT
GAGGGTTGAGCCTTT---------------TTCCTTTCTTTTCTTGTCGTTGCGACAAGAGGAGGAGAGAGTTGACAAGA
AAGAATATTCATAGAGATTTGGTTTGATGGAGATGGCAATAATTG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AATTGAATTGAGCATCACTTCACTCACTTGCTTTGA
TGTATGAATCCTATCCTATCCTTTCCTATGTGCATCTTATCCTGAAACAAGAAGCAAGCTAGCTAGGGATAGATAGATAG
ATAGAAAGAAATGTAG-TAGTAACTAAAATTAGGAGGGGGGCATGCATGCATGCACTTGGTGCTTAGGCCTGCCAGCCGG
GCAAACCATCAACCCTACGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCAT---------------GGATTCCG
GCGGGCCGGTCAATGACCTTGCTCGTCGTGTCGATTGGGATTGGATCGAAGAATCGAATCAAAATGGATTGGATTGAATG
CTTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGG----AAG
GAAGGAAGGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGG
TGGTGGT---------CCGGCGGCCGTACCTGCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAACCGTCACCG
TCCGTCCCCCTAATCTTCTGCGACGAGATGATGATCATCAAGAGGAGGGGGGCGCCCGCAGCAGCAGCAACAACAACAAC
CTTGCCACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTAGTTACACAAATCTTCATCTATCCATCCATGTACATA
CATAAATAAATGCCTGCCCTTAAGAAACATATCACAATATTTGTATGATATTACATTTTGTTTTCTTATTAAGGCAAACC
TCTGACCAACAAGTAATAATCCTTTAAATTTGTGATGATGTGATCACCTCCTTTTTTTTGTCTACCTTTGATGAGACCAA
CAAAA
>chr4A_353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CTATATATCCGCGTGAATTTTGAAGAA-TTAACTGCCGTGGTGGGTCA
GAATTTATAGTATGTTTAAAAAGAATGTTTCTTGAAATTCAGAACAATTCTTTAAATTACCAAG-TTTTTTGACAACCAT
GATATTTTTTGCGAAAATGTGAACATTGCTTTAATTTGTGAATGAATTTTGAAGAAGGAACATTTTTCTTGCATTTGTGA
ACAAATTA--AAAAAAATGCAATGAGATGTGAACAAAATGTGG------CCGTTGAAGACTATGAATTATTTTTTCTTCT
TTTGCAATGCACGGGCCCTTTTGCTAGTAAGTAAATAAAA-CATAAAGACGTTATTATGTTCTTTGTAATGAGCGGTGGA
A-AGATGTGAAGTTGAACTTCTTTTAAATAACTTTGGCATAT----CAACAAAAGGAGTTAGGAGGAGCAAACTTCCAAA
TTACAGCATTACTACTACTACTACTAGAAGACCGCCCGTGCGTTGCAACGGGACCACATTAACTTTAAGAGTTCAATATT
AATATTTTCATACATATCAAGTGACATTGACGACCTTTTTTACCGTCAAATCCTCACACACACTCTCTCTCCCTCCCTCT
TCCTCACTCTCTCTCCCCCTCTCCCTCTCTCTCTCTAACACACACATACATATCCATCTTATTGGGTATGGGACCATAAT
CCATCTATTTCACACACACACGCTAGTGCATAACAATATGGATTATGTGTATTATATTTGCCACCACAACTGAGGAAATT
AATTTCATGTAAATCGGCCAGCCACAGCTCCAAGAATACGCGGAGGAGGTGGCCCGGGTCAGCATCGGTGCCGTCCGGCG
CGGGCCACGGGCCCACTTCCAAGTGCGTCTGCATGCCGGCCACCCCGCCGGATCCTTCAAGTGGCGCTTCCACCGCACCA
ACTCCCAGGGCCACGGCCACGGTCATGGCCAGTGAAGCCGCCCTTCTTCGCCCCCTTCACCGGCCGCGGCCAACGCGGTG
CCGCGTGCCGGGCCTCGCCGTCCTCGTCCTCCGGCACCATCACGACCCAGTGACGCAGCCCAAGCCTCGGCCTCGAGAAT
CAAGAACGCTCGACAACGGAGAAGGAAGGGAAGATCATATACATGTCATAAGAAAGGGAGTTTATTTACTGCTCCCTCGA
TGTATTGTTTCCTTTGTTTGGAGATTGATTACCATCCGTGAGTTAAGGTAAGGTTAATGTGTTTGAGCGATTTTTCTGAA
AATCAATTATTTGTTTTCTAATTAATGTGATTGAGTGATTTAAGGTAAGGTTAATTAATTTAGATTTGATCTTTAGAGAT
TGTTCGTGATTGATTCTTCATTACTAAATAACTTGCGCCAGTATGGAAAGTTCTGATCTGTTCAGATTTCTTTCATTGTG
TGAGAGGGTGACGCAAAAATAACCCGATGAATTGGGAGGAGGGGATGAAAAAAATCTCCGAAAAAAAACCAGCGAAGGTG
GGAGGAGGTACCAAAAAAACCATGGGAGGTGGGACGAAAAAAAACCTGGAAGCGAGACTACCAACTACTGGGCCACGGTC
ACGGCCACGACCAGTGAAGCCGCCCTTCTTTGCCCCCTTCACCGGCCGCGGCCAACGCGGTGCCACGATGCCCGGCCTCA
CCGTCCTCGTCCTCCGGCACCGTCACGACCCAGTGATGCAGCCCAAGCATCGGCCTCGAGAATCAAGAACACTCGACAAC
GGAGAGGGAAGGGAAGATCATATACATGTCATAAGAAAGGGAGTTATCTACAGCTCCCTCGATGTATTGTTTCCTTTGTT
TGGAGATTGATTACCATCCATGAGTTAAGGTAAGGTTAATATGATTGAGCGATTTTTCTGAAAATCAATTATTTGTTTTT
TAATTAATGTGATTGAGTGATTTAAGGTAATGTTAATTAATTTAGATTTGATCTTTAAAGATTGTTCATGATTGATTCTA
CATTACTAAATAACTTGAGCCAGTATGAAAAGTTCTGATCTGTTCAGATTTCTTTCATTGTGTGAGAGGGTGACGCGAAA
ATAAACCGATGAATTGGGAGGAGGGGACGAAAAAAATCTACGAAAAAAACCCAGCGAAGGTGGGAGGAGGTACCAAAAAA
AACCATGGAAGGTGGGACGAAAAAAAACCTGGAAGCGAGACTACCACTGCTCCATTAGGAGTAGAGACTACGACGACGAC
GACGACTGCTACTACTACTACTCGAGAAGGAATATTTGTTTTTTTATGAGGAAAGGATTGGAGAAGGAAGATTAGATAGC
TTCCCCTGGGCTGGGCTGGGCCGGGCCTGTCTGTCCGGCCCACCGAATGAAGGCCTGACCTGATCATTTCAGTTCAGTTG
AGCCCACACCCACTCACCCTCCTCCTCCTCAGTCCTCGATGTCGCCGGCGGCGTGGACGAGGACGAGGAAGCTCGTGCTT
GGCCTTCCCCTGCTCGCCGGCCGAAGC------AGCAGATCCGCTGGAGATGGCCGGTAAGCAACCATCTCTTGTTTGGT
---------TTTCTTTCCAGCTCATGGACTGA---------------------GTTGGTTTCAGCTCCTCCTCCTACTTT
------GCCGGTGCCGGTGCCGCCGGAGAGA------------AGA---AGAAGAGGTCTACGGCAGTCCGGAAGGTGGT
GGCTATCGGGGCCATCAGCCTGGCCGGGGGAGTCGCCCTCAGCGCCATCAACGACCTCGCCATCTTCCACGGATGCACCA
GGTCTCTAGGATGTGCATCTGCTTCTGCATCTGCTTCTGCTTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTCTAGAA
TCAATTCAACATCTACATTAGTACATGATATAACTGCTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGCTTTCTTGGAATTTG------------------TCACCTTTCTTCGAATAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCTTCTTTCTATGTATACCCT------GTACCTGTACCTGTACTATATGCAG
GTTTGGACCCTTTTTCAGTTATTATTAGGAACATTAGATAAATATTTATGCACCAACGAAGAACATGCTCCATATATCTC
CTATTAAATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATGATTTGTATGATGATGATGATGATGATATGTGCCTACAAT
CCAGCAAGGCGATCGACAAGGCTAGCGAGAACCCAGAGGTCGTACAGGCGATCGGGGTGCCTATAGCTAGAGGCCCATGG
TACGATGCATCTGTCGTTTTGGGTCATCGGCGCCGATCCGTGGCGTGCACGTTCCCGGTCACAGGGCCACGGGGTTCGGG
AGTGTTTCAGATCGAGGCCGTCCGGAATGGAGGTTTGTCAACAGCTAC------------TTCTTTCTTGACACTCATAC
ATAGATAGATA-----------CTCGTGGATTTCCTTCAGTACCTAGTTTTCTTATA-ATGTCTGCTTTATCTTGTCTTG
TGTTACTTGTGCATAAAGAGGATGGTGTGCTTTCGTTTCTGCGCCACCACGACTGGGAGATACTGGCCATGGATGCTCGC
CTGGAACTGCAGCTAGA------AGCACTACCTTCAGATGATGGCAGTCAGGGTCAGCAACCAGTCGTGATGAACCTAAA
CCTGATGAGCAGCACTT---CTGCTGATGACGACGACAATTGTAAGATTAGTGATACTGCTGGTGGTGGGGAAATCAGTT
GAGAGTTGAGCCTTTC--------------TTCTTTTCTTTTCTTGTCGTTGCGACAAGAGGAGGAGATAGTTGACAAGA
AAGAATATTCATAGAAATTTGGTTTGATGGAGATGGCAATAATTGAAAGGGTTTAGGCTTAGTAGAACTAAAACCGAGTA
CATGATGTGCGGTTTCAGTACTACTAGCTGTGAGGAGGAGGAGGTTAGCCTTGATGGCCAGGTGGTACCTCGGAAGGACA
CCTTTCGGTATTTGGGGTCAATGTTGCAGGAGGATGGGGGTATTGATGAAGATGTGAACCATCGAATTAAAGCCGGATGG
ATGAAGTGGCGCCAAGCTTCTGGCATTCTCTGTGACAAGAGAGTGCCACAAAAGCTAAAAGGCAAGTTCTACAGGACGGC
GGTTCGACCCGCAATGTTGTATGGCGCGGAGTGTTGGCCGACTAAAAGGCGACATGTTCACAGTTAGGTGTGGCGGAGAT
GCGTATGTTGAGATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATATACGAGATAGAGTTGGGGTAG
CACCAATTGAGGAGAAGCTTGTCCAACATCGTTTGAGATGGTTTGGGCATATTCAGCGCAGGCCTCCAGAAGCTCCAGTG
CATAGCGGACGGCTAAAGCGTGCGGAGAATGTTAAGAGAGGGCGGGGTCGACCGATTTTGACATGGGAGGAGTCCGTTAA
GAGAGACCTGAAGGATTGGAGTATCGACAAAGAGCTAGCTATGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAG
AGCCATGAGTTGGTTGCGAGATCTTATGGGTTTCACCTCTAGCCTATCCCAACTTGTTTGGGATTAAAGGCTTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTTGGAGATGGCAATAATTGAATTGAATTGAGTTGAGCATCACTTCACTCACTTGCTTTGA
TGTCTGAATCCTATCCTATCCTATCCTATGTGC--------CTGAAACAAGA----AGCAAGCTAGGGATAGATAGATAG
ATAGAAAGAAATGTACCTAGTAACTAAAATTAGGAGGGGGGCATGCATGCATGCACTTGGTGCTTAGGCCTGCCAGCCGG
GCAAACCATCAACCCTACGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCAT---------------GGATTCCG
GCGGGCC-GCCAATGACCTTGCTCATCGTGTCGATTGGGATTGGATCGAAGAATCGAAACAAAATGGATTGGATTGAATG
CTTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGG----AAG
GAA----GGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGG
TGGTGGTGGTGGTGGTCCGGCGGCCGTACCTTCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAGCCGTCACCG
TCCGCCCCCCTAATCTGCTGCGACGAGATGACGATCATCAAGAGGAGGAGGGCGCCCGCAGCAGCAGCAACAACAACAAC
CTTGCCACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTACATTACA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr4B_1159
--------------------------------------------------------------------------------
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------------------------------------TCTTGTTTGGTTGGTTGGTTGGTCTCAGCTCCTCCTCCTACTCT
TACTGGGCCGGTGCCGGTGCCGCCGGAGAGA------------AGATCCAGAAGAGGTCGACGGCAGTCCGGAAGGTGGT
GACCATCGGGGCCATCAGCCTGGCCGGGGGAGTCGCCCTCAGCGCCATCAACGACCTCGCCATCTTCCACGGATGCACCA
GGTC---------TGCATCTGCATCCTCATCTGCATCT--------------------------GCTCTGCTCTGTAGAA
TCAATTCAACATTTACAGTACTACCTCCGTCTAGGTGAATAAGTCATTAGCGTAGTTCTAGGTCATCGATTTGAGGAATT
AAATTTGTGTTATATGTCATGAAAATTATATCACTAGATTTGTACACGGATGTAGTTTCTAAATATATATTCTTTGTCAC
ATATAATACATATTTAGATAGTTAAATCGTCAACCTAGAACTACGCAAATGACTTATTCACCGAAACGGAGGTCTTCGAA
TTTATCACCTTGCGTACATGATATTTA------------------TCACCTTTCTTCGGATTTACTACTACCTGCTTGCT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTTCTATGTATACCCTCTATCTGTACCTGTACCTGTACTATATGCAG
GTTTGGACACTTTTTTCAGTTAA---------ATTAGATAGATATATATGCACCAGCAAAAAACATACTCCATATATCTC
CTATTAAATCTTTCTTTCCTTCCTTCTTTCATGACTTGT--------------ATGATGATGATGATATGTGCCTACAAT
CCAGCAAGGCGATCGACAAGGCTAGCGAGAACCCAGAGGTTGTACAAGTGATCGGGGTCCCTATAGCTAGAGGACCATGG
TACGATGCATCTGTCGTTTTGGGTCATCGGCGCCGATCCGTGTCGTGCACGTTCCCGGTCACAGGGCCACGGGGTTCGGG
AGTCTTTCAGATCGAGGCCGTCCGGAATGGAGGTTTGTCGACAGCTAC------------TTCTTTCTTGACACTCATAC
ATAGATAGATATATATGGCTGCCTCCTGGATTTCCTTCAGTACGTAGTTTTCTTATA-ATGTCTGCTTTATCTTGTCTTG
TGTTACTTGTGCGCAAAGAGGATGGTGTGTTTTCATTTCTGCGCCACCACGACTGGGAGATATTGGCCATGGATGCTCGC
CTGGAACTGCAGGTGGAAGCTGCAGCATTACCTTCAGATGATGGCGGTCAGGGTCAGCAACCAGTTGTGATGAACCTAAA
CCTGATGAGCAGC---GCTGCTGCTGATGACGACGACAACTGTAAGATTAGTGGTACTGGCGGTGGTGAGGAAATCAGTT
GAGAGTTGAGCCTTTTTCTTTTCTGTTCTTTTCTTTTCTTTTCTTGTCGTCGCGACAAGAGGAG---AGAGTTGACAAGA
AAGAATAT----AGAATTTTGGTTTGATGGAGATGGCAATAATC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AATTGAATTGAGCATCACTTCACTCACTTGCTTTGA
TGTATGA-----ATCCTATCCTATCCTATGTGCATCTTATCCTGAAACAAGA----AGCAAGCTAGGGATAGATAGATAG
ATAGAAAGAAATGC----AGTAACTAAAATTAGGAGGGGGGCATGC---------------------------CAGCCGG
GCAAACCATCAACCCTCCGTTTGTTTAGCTTAGCATGTGGGTGGCATGGCATGGCATGGCACGGCATGGCATGGATTCCG
GTGGGCCGGCCAATGACCTTGCCCGTCGTGTCGATTGGGATTGGATCGAAGAATCGAATCAAATTGGATTGGATTGAATG
CTTGGGCAAATTCTTTCTATGTATCGTTAGGTAGTAGAATAGAATTTGCTCAAGCATTCACCACCTAGCAAGCAAGCAAG
GAA----GGATGGGCATCTTGTGTTGCTTCCAGTCCGGCGCCGACAAGCTCCTGGATCATGGTCATGGTGGTGGTGGTGG
T---------------CCGGCGGCCGTACCTTCTTCCACAACCAAGAAGCCGCCTCCCCGAGACGCTCCAGCCGTCACCG
TCCGCCCCCCTAATCTGCTGCGACGAGATGACGATCATCAAGAGGAGGAGGGCGCCCGCAGCAGCAGCAACAACAACAAC
CTTGCCACCCTCGTCGATGAGATTGTTGCAGAATCAGGTACCTACATTACA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S----------------S----------SS----S--S
----S-SSSSSSSS---SSS---------------------S--S--------S----------S----------S---S
----------S----------S-SS------S---------------------S---S-------S--------------
-------SSS----S--S--S----------------------SSSSSS----------S-----S--S----S-S--S-
-------SS--------S----------------------S------------------------S--------S--S--
-S---S------------S----------------S------SSSS---------------S----S-------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S--S---
-------S-S-SSSS--SS-SSSS-S---SS-SS--SSSS-SSSSS-SSSS-S-SS-SSS--------------------
-----------------------------S-------------------------S---------S-------------S
--------------S---------S------------S------------------------------------S-S---
-----------------S--SS--S-SSSSSSS------------------------------------S---S-S-S--
SSSSSSSSS-----------------------SSSS---------------S--------------------S--SS---
-------------------------------SSSSSSSSSSSS-------------------------------------
--S------------------------------------S--S-------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-SS-SSSS-SSSSSSSSSSSSSSSSSSSSS--------------------SSSSSSSSS-SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------SSS-SSS-SSS--------------------------
---------S-----S--S--SSSSS-SSSSS-SSSSSS--S----------------------------------SS--
S-----------------S--S---SS-----------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------S-----------S-----------S-----S--S-----------S--
-------------------S-------S-------S------------SSSSSSSSSSSS--------------------
------------------------------------------SS--SS-S--S-S-SS----------------------
S---------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------------------S----------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-----------------------------SSSS---S--------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---SSSS-------------------------------------------------------------------------
-------------------------------S--------------------------------------S---------
----S-----------S--------------S----------------S-------------------------------
--------------------------------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_121
--------------------------------------------------------------------------------
---------------------CCAGGCCGACCCAACTATTT---------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_2833
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------AAGCAGATCCGCTGGAGATG----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_167
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCATCCCCACTTC
CTGTGTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3506
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTTACATGCCCAAGG
GGAGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_2833
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCGCAGGAAGAGGAAGAGGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_5690
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCAATGACCTTGCTCGTCGT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
