>input_sequence_53341
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-----------------------------------------ATGCCGTCGTTCCAAGGCTGGATAGATCTGCGGCCGGAG
CTCCTCTGTCGCGTCGCCGATGGCCTCGACGACCTCAGGTTCTACACCAGCGTGCGCGGCACCTGCACGGCGTGGCGTGG
CGCGCTCGCGCCGCCTGCACCATCGCTGCTCGTCCTCCTCCGCGACGACGCCACCAGACGTCGGCACGCCGCCATCGTCT
CGCTCCCCGCGCACCGCTCCTTCGGCCTCCAG----GCAATCCCCTCAGGCTCGTCCTGCCCCAACGCCTCG-CCCCCGA
TGCGCGGCTCCTTCGAGTTCATGGCCACCTACCCGATTAGGAGCTACCTCGGTTGCGGAGGCGGGTGGCTTGCCCTCTCC
GTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCGCCGAGATCCTCCTACCGCCGCTCAT
CTACGACACCCGCTTGCTCTCCAAGATCGTTTTCGCGCCTGACCCCGCTAGGGAAGACTTCATCACGGCCACCATCTGCG
ACATCGACAGGCTCGCCTACGTCACCGCGGGGGCTAGGAGGTGGGCCGTCCTTGACCGCGTCCGTCTTGCCACCGGAGAC
CAGCTCGTCGATGTCATCTACCATCAAATTGGTCAAAATGGTATGGTTTACTGCCTCACTCGATTTGGGAATGTTTATGT
GCTCCGCCTACCAGAACGTCGCCGCCGAGAACCCGTCATCATCGAGGACCAGACATCAGCAGAGGATCTTGTAACGCATA
ACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAATGCGCCGGCTAGCGTGCAACCACTACTCTTTTCTT--
-------------------CGGTGAGCAGTTTCACCCCACTGTA-CGTAGCTGTTTCGGATTTCAC--------------
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-----------------------------------AAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTATACCAGAT
CCGGAGGAATGCTAGTTGTACCGTCACTTTGCATCTGGCGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTG
TTCTCAAGTATAATCCCCGACGCAGGCCTTGCTGGGACGCGGTGGCTGACTT---------GGGGGGATACTCAGTGTTT
GTTGGGAGGAG-CAATGCGGTGTCAATGCATGCTGAAGGTGTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTG
GGAGAG-GTAGGGATCAAGGCATGGTCTTTGACATGGGGACCGGGAAATCTACACCTTGCCTTCCCCCTACGGCTGGTGT
CGTTCCAGGGCCTCTACAGTGTACAATCTGCTGGTACTTTCCGAGGAAGGTAGTGAATAACTGC---AATACAAATGAAT
TAGGTGTTTATGGGACCCGAGCAAGGGTTC-GGGCTCAACGTGCACAAGACATGTCACAATGA-----------------
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>chr4A_1_TraesCS4A01G310900
ACACAATTTTTTCCATACAAATTTTCCATCCTATTTCTACCCCATGAAAAAGACTGCTCATTCATTTCTCTCTATATAAA
AATGAACTAGACACATCTACTAGTATATTATACACCTATAAATCAAGTGTGCATGCCAACGGGCATGATTGAGAAAATGT
TCGCATTTAAAAAAAATGTTCACATATTCAAAAATTGTTCGCAATTCTAAAAACAAATGTTTGGGAAAATGATGTTCATG
ATTTTTTTTTTAAAAAAATGTATATTTAATTTTTTATAATGAAATTGAACAAAATTTTACCAATTCAAAAACTGTTCATG
ACTTACAGAATAGTTTACTAATTCACAAATTGTTCATTGTTCAAAAATAATCATGCATTTCAAAAACTTTTCATTAAATA
AAAATATGTTCTGAATTTCAAAAATTGTTCAACCAATTTCCAAAAAATGTTTGTCAATTCTAGAAATGTTCGCCTATTCA
AGAAAAATGCTTGCAAATCGTATAAAATGTTCATGAATTCATAAAATGTTTATGATTTAAGAAAATGTTCAAAAAATATT
AAATTGTTCATAATTTCAGGTATGTTCACGAGTTTATATTCATGATTTTTTATGATTTCGCGAAAATGAGACTGGTAGTG
CATCTCGGTGATGCTGCAAAATATGGTCAGGACCATTGAAGATTATGATTTTTTTCTCAAGTTGCAACCTACAGGTTGTT
TTTCTAGTCTATACATACTAATAACGAAGCTATTGCTTCTAGCGGTACATCGTGGATATTGCCCTGAAAGTTATAAAATA
TTATCCACCGATGCCACTTAAAACTGTTACACATAGGGGAATCGCCCGCCTGGGCCGGCCCATTCAGTAGGGACCTCCTG
TACTGGATTTGCTATAAAAAAGGAAGTCAGGCCAAGCCTACCGTGAAACCCTAGGCCCACACACAATCCCTCCATTCCTC
ACAGAAAAAGAGG-CAAGAATCCCCCCCTCCGCCGCCAGCCATGCCGTCGTTCCAAGGCTGGATAGATCTGCGGCCGGAG
CTCCTCTGTCGCGTCGCCGATGGCCTCGACGACCTCAGGTTCTACACCAGCGTGCGCGGCACCTGCACGGCGTGGCGTGG
CGCGCTCGCGCCGCCTGCACCATCGCTGCTCGTCCTCCTCCGCGACGACGCCACCAGACGTCGGCACGCCGCCATCGTCT
CGCTCCCCGCGCACCGCTCCTTCGGCCTCCAG----GCAATCCCCTCAGGCTCGTCCTGCCCCAACGCCTCG-CCCCCGA
TGCGCGGCTCCTTCGAGTTCATGGCCACCTACCCGATTAGGAGCTACCTCGGTTGCGGAGGCGGGTGGCTTGCCCTCTCC
GTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCGCCGAGATCCTCCTACCGCCGCTCAT
CTACGACACCCGCTTGCTCTCCAAGATCGTTTTCGCGCCTGACCCCGCTAGGGAAGACTTCATCACGGCCACCATCTGCG
ACATCGACAGGCTCGCCTACGTCACCGCGGGGGCTAGGAGGTGGGCCGTCCTTGACCGCGTCCGTCTTGCCACCGGAGAC
CAGCTCGTCGATGTCATCTACCATCAAATTGGTCAAAATGGTATGGTTTACTGCCTCACTCGATTTGGGAATGTTTATGT
GCTCCGCCTACCAGAACGTCGCCGCCGAGAACCCGTCATCATCGAGGACCAGACATCAGCAGAGGATCTTGTAACGCATA
ACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAATGCGCCGGCTAGCGTGCAACCACTACTCTTTTCTT--
-------------------CGGTGAGCAGTTTCACCCCACTGTA-CGTAGCTGTTTCGGATTTCAC--------------
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-----------------------------------AAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTATACCAGAT
CCGGAGGAATGCTAGTTGTACCGTCACTTTGCATCTGGCGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTG
TTCTCAAGTATAATCCCCGACGCAGGCCTTGCTGGGACGCGGTGGCTGACTT---------GGGGGGATACTCAGTGTTT
GTTGGGAGGAG-CAATGCGGTGTCAATGCATGCTGAAGGTGTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTG
GGAGAG-GTAGGGATCAAGGCATGGTCTTTGACATGGGGACCGGGAAATCTACACCTTGCCTTCCCCCTACGGCTGGTGT
CGTTCCAGGGCCTCTACAGTGTACAATCTGCTGGTACTTTCCGAGGAAGGTAGTGAATAACTGC---AATACAAATGAAT
TAGGTGTTTATGGGACCCGAGCAAGGGTTC-GGGCTCAACGTGCACAAGACATGTCACAATGATGTGTCGCCAAGATAGC
TTGGTGACATAGTGAGCACCACCAGCCTGGAAGTGATGTTTATCATGCATGACAAGAAATCTTGCAGAGTGTAATTGCTT
GTTGTGACCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAAACCACTTTTCAACCCAATAGAACTGATGGAAGGATTAC
ATTTGCAGCCAATGGTACAAACAATTTTTGAAGCTTCATTAGCAGCCAATGAAAGGGAAAAGGATGGTGAGAAGTTTGAG
AAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAATGTCTTGAGAAGAATACATAATAAGTAATACATGGTAT
GTTGTGTTGGTTT-AGTTCCCATGCTTGGATACATGTCGGTCGGGAAACCCGTTCTCATCGCCCGTGGTGGTGGTGGAGA
TGACTTGGTGATGCGCAGCCCATCTGTTGTGGGCGTCCGTGTCTAAGTCACAAGATCCTCAATAACCTTACCACCCCCTT
GTTCGGTGCAGGTACTTAACGTACGCTCTTACATACATACGCGATGTTAATGAGGCAAAGTGGTACAAGGCTTTCGAGAA
GGTACCATCATAAACCGGTATTCTCTTTGTTTGCCATTGATATCAGGCGATTCTACAAAGAGGAGTCCTGATGAGTTCAT
CACATCTTTTGTTTGGGCTTGAGAAAGCTTCTAAGGCATGTCGTGTCATCTGGAGCGATTTCCGATTACTATGTCCTTCA
TGGAGGGGTATCCCCCTCTGAGTAGAACTATTGTTCGTCACCAACCTAAGGGTAACATCCCCTGGTTTTGTGGAATTCCT
TATACTTTAGGTGTAGTCCACATATCCCTCGAGTCCCTTCCATATTAGTTGGGTAGACCGTTCCATTTATAATTCACTTT
TTGAGAAAATGATATGCATCTATTATAAAGATTCATCAGAAAATACAAAAACACCTCAATAAATAATAATAATAATAATA
ATACATATGGGTCCCCGTACCACC
>chr4D_886
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-----GATTTGCTATAAAGAAGGAAGTCAGGCCAAGCCCACCATGAAACCCTAGGCCCACACACAATCCCTCCATTCCTC
ATAGAAAAAGAGG-CAGGAATCCC--CCTCCGCCGCCAGCCATGCCGCCGTTCCAGGGCTGGACAGATCTGCCGCCGGAG
CTCCTCCGCCACGTCGCCGATGGCCTCGATGACCTCAGGTTCTATACCAGCGTGCGAGGCACCTGCACCACGTGGCGTCG
CGCGCTCGCGCCACCGGCGCCGTCGCTGCTCGTCCTCCTCCGCGACGACGCCACCAGGCGTCGGCACGCCGCCATCGTCT
CGCTCCCCGCGCACCGCTCCTTCGGGCTCAAG----GCAATCCCCTCAGGCTCGTCCTGCCCCAACGCCTCCCCCCCCCA
TGCGCGGCTCCTTCGAGTTCACGGCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGGCTGGTGGCTTGCCCTCTCG
GTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCACCGAGATCCTCCTACAACCGCTCAT
CTACGACACCCGCTTGCTCTCCAAGATCGTCTTCGCGCCTGACCCCGCTAGGGACGACTTC-------------------
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>chr4A_891
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----------GCTATAAAGAAGGAAGTCAGGCCAAGCCCATCGTGAAACCCTAGGCCCACATACAATCCCTCCATTCCTC
ACAGAAAAAGAGG-CAGGAATCCTCTCCTCCGCAGCCAGCCATGTCGTCGTTCCAAGGCTGGATAGATCTCCCGCCGGAG
CTCCTCACTCGCGTCGCCGATGGCCTCGACGACCTCAGGTTCTACACCAGCGTGCGGGGCACCTGCACGGCATGGCGTCG
CGCGCTCGCGCCGCCTACGCCATCGCTGCTCGTCCTCCACCGCGACGGCGCCACCAGACGTCGGCCCGCCGCCATCGTCT
CGCTCCCCGCGCACCGCTCCTTCGGCCTCAAG----GCAATCCCCTCAGGCTCGTCCTGCCCCAACGCCTTG-CCCCCGA
TGCGCGGCTCCTTCGAGTTCACGTCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGGCGGGTGGCTTGCCTTTTCC
GTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCGCCGAGATTCTCCTACCGCCGCTCAT
CTACGACACCCGCTTGCTCTCCAAGATCGTCTTCGTGCCTGACCCCACTAGGGACGACTTCACCGCCGCCACCATCTGTG
ACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGGTGGGCCATCCTTGACCGCGTCCGTCTTGCCACCGGAGAC
CAGCTCATCGATGTCATCTACCATCAAAATGGTCAAAATGGTATGGTTTACTGCCTCACTCGGTTTGGGAATGTTTATGT
GCTCCACCTACCGGAACGCCGCCGCCGCGAACCCGTCATCATCGAGGACCAGACATTAGCAGAGGATCTTGTAACGCGTA
ACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAACGCGCCGGCTAGCATGCAACCACTGCTCTTGTCTT--
-------------------CGGCGAGCAGTTTCACCCCACTGTA-CATCGCTGTTTCGGATTTGAC--------------
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-----------------------------------GAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTGTACCAGAT
CTGGAGGAATGCTACTTGTACCGTCACTTTGCATCTGGTGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTG
TTCTCAAGTATAATCCCCGACGCAGGCCTTGCTGGGACGCGGTGGCTGACTT---------AGGGGGATACTCGGTGTTT
GTTGGGAGGAG-CAATGCGGTGTCAATGCATGCCGAAGGTGTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTG
GGAGAG-GTAGGGATCAAGGCATGGTATTTGACATGGGGACCGGGAAATCTACACCTTGCCTTCCCTCTACGGCCGGTGT
CGTTCCGGGGCCTCTACAGTGCACATTCTGCTGGTACTTTCCGAGGGAGGTAGTGAATAACTGC---AATACAAATGAAT
TAGGTGTTTATGGGACCGGAGCAAGGGTTC-GGGCTCAACGTTCACAAGACATGTCACAATGATGTGTCGCCAAGATAGC
TTGGTGACATAGTGAGCACCACCGGCCTGGAAGTGATGTTTATCATGCATGACAAGAAATCTTGCAAAGTGTAATTGCTT
GTTGTGTCCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAAACCACTTTTCAACCCAATAGAACTGATGGAAGGATTAC
ATTTGCAGCCAATGGTACAAACAATTTTTGAAGCTTCATTAGCAGCCAATGAAAGGGAAAAGGATGGTGAGAAGTTTGAG
AAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAATGTCTTGAGAAGAATACATAATAAGTAATACATGGTAC
GTTGTGTTGGTTT-AGTTCCCATGCTTGGAT-------------------------------------------------
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>chr4B_895
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--------------TAAAGAAGGAAGTCAGGCCAAGCCCGCCGAAAAACCCTAGGCCCACACACAATCCCTCCACTCCTC
ACCAAAACGGAGGACAGGAATCCCGA-------------------CGTTGTTCCAGGGCTGGGCAGATCTGCCGCCGGAG
CTCCTCCGCCGTGTCGCTGATGGTCTCGACGACCTCAGGTTCTACACCAGCGTGCGGGGCACCTGCACGACCTGGCGTCG
CGAGCTCGCGCCGCCGGCGCCGTCGCTGCTCGTCCTCCTCCACGACGATGCCACCAGGCGTCGGCACGCCGCCGCCGTCT
CGATCCCCGCGCATCGCTCCTTCGGCCTCGAG----GCAATCCCCTCAGGCTCGTCCTGCCCCAACACCTCG-CCCCCCA
TGCGCGGCTCCTTTGAGTTCACGGCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGGCGGGTGGCTTGTCCTCTCC
ATCTGCCTCTACGACGGCCAAAGCCTGCTCACCTTCTTCCACCCAGTCACCGCCACCGAGATCCTCCTACCACCGCTCAT
CTACGACACCCGCTTGCTCTCCAAGATCGTCTTCACGCCTGACCCTGCTAGGGATGACTTCGCCGCCGCCACCATCTGCG
ACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGGTGGGCCGTCCTTGACCGCGTCCGTCTTGCCACTGGAGAC
CAGCTCATCGATGTCGTCTACCATCAAAATGGTCAAAATGGTATGGTTTACTACCTCACTCGGTTTGGGAATGTCTATGT
GCTCTGCCTACCGGAACGCCGCCTCCGGGAACCCGTCATCATCGAGGACCAGACATCAGCAGAGGATCTTGGAACGTGTA
ACATGCGCATCATTCGAATGCACAATGCCGGACCAGACCTGAACGCGTCGGCTAGCGTGCAACCACTGCTCTCGTCTT--
-------------------CGGTGGGCAATATCGCCCCACCATA-CGTCACTATCTCGGCTTTCAC--------------
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-----------------------------------GAGTGCCAAGAACCTAGTGTTCTGCAATGGCAACATGTACCAGAT
CTAGAGGAATGCTAGTTGTACGGTCACTTTGCAGTTGCCGGGAGGTGAGCATCGCCGTATAGAGGAGGATGAAATATTTG
TTCTCAAGTATGATCCCCGGCGCAGGCCATGCTGGGACGCAGTGGCTGACTT---------GGGGGGATACTCGATGTTT
GTTGGGAGGAG-CAATGCGGTGTCGATGCATGCCGAAGGTGTTCCAGGGCTCAAGGGCAATTGTGTCTACTGGATAGGTG
GGAGAG-GTAGGGATCAGGGCATGGTCTTTGACATGGGGTCTAGGAGGTCTACACCTTGCCTTCCTCCTGCTGTTGGTGT
CGTTCCGGGGCCTCAACAGTGCACGATCTGCTGGTACTTTCCGAGGGAGGTAGCGAATAACTGC---AATACAAATGAAT
TAGGTGTTTATGGGACCCGAGCAAGGGTCC-GGGCTCAACGTGCACAAGACATGTCACAATGATGTGTCGCCAAGATAGC
TTGGTGACATAGTGAGCACCACCGGCCAGAAAGTGATGTTTATCATGCATGACAAGAAATCCTGTAGAGTGTAATTGCTT
GTTGTGTCCAAGCCTGGTGATAAGCGAGGAGGACAAAGACAAACCACTTCTCAATCCAATAGAACTGATGGAAGGATTGC
ATTTGCAGCCAATGCTAGAAACAGTTGTTGAAGCTTCATTAGCAGCCAATGAAGGGGAAAAGGATGGTGAGAAGCTTGAG
AAGAACAAAAGATTTGA--GTATTTGTGTCTGAGATGATCAATGTCTTGAGAAGAATATATAATAAGTAGTACATGTTAT
GTTGTGTTGGTTT-AGTTCCCATGCTTTGATTATGTC-------------------------------------------
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>chr3B_995
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-----------------------------------CCGGCCATGCCTCCGTTCCGGGGCTGGACGGACCTGCCGCCGGAG
CTCGTCGGCCAGATCGCCGACGGCCTCGACGATCTCAAGTGCTACGCCAGCACGCGGGGAGCCTGCAGCACATGGCGTCG
CGCCCTCCCGCCGCCGGCCCCTTCACTGCTTGTCGACCACGGCGCCGCCGCCATCAAGTGCCGTA---CCACCGCAACCT
CGCTCCCTGCGCATCGCTCCTTCGAGCTCACTTAACGTCATCCCCTCAGGCGGGCTCTGCCCCGCTGC------------
-GCGCCGCTCTTTCCAGCTCGCCAAAATCCCTGCGCCCAGGACCTGCCTCGGCTGCTGCAGCGGATGGCTCGCTCTCTCC
GTCTTCATCGACGACGTCCACAGCCTGCTCAGCCTCTTCCATCCCGTCACCGCCGCCGAGATCCTCCTGCCGCCGCTCAT
CTACAACACCCGCCTCGTCTCCAAGATCGTCTTCGCGCCCAACCCCGCCACCGATGACTTCGCCGCCACCGCCATATGTG
ACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGATGGGCCGTCCTCGACCCTGTCCACCTCGCCGCCGGAGAC
CAGCTCGTCGACCTCCTCTACCATGG---------AAATGGTATGGTCTACTGTCTCACTCGGTTTGGAGATGTCCACGT
GCTCCGCCTGCCACAGCGTCGCCGTCGGGAACCTATCATCCTCGAGTGCCACACACCAGCAGATTATCCAGTAGTGCATA
ACAAGCGGATCTTCCAGATGCATGGAACCGGACCGGACCTAAATGTGCGGGCCACAGACGAGCCACTGTTGTCATCTGTG
GGCAACCCAGTGTTCGACGCCGCCACCTGTTTCACTCAGCCATA-CATCCCGGTCTCGATTTTTAC--------------
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-----------------------------------TAGTGCCAAGAACCTGGTGTTCTGCGAGGGTAACTTGTACCAAAT
CTGGAGGAATGTGACCTGCACGGTTACTTTGCAGCTGTCAGGAGAGGGTCGCCGCCGTGTAGTAGAGGATGAAATATTTG
TTATGAGGTATGATCCCTGGCGACGGCCATGTTGGGACGCCGTGTCCGACCT---------GGGAGGATACTCCATCTTT
GTCGGGAGGAA-CAATGTGGTTTCGATGCACGCAGAAGGTGTTCCTGGACTCATGGGTGATTGTGTGTACTGGATAGGCG
GAAGGG-GTAGAGATCAGGGCATGGTCTTTAACATGAAGACTGGGAGATCAACACCTTGCCTTCCCCCCTTAGATGGTGT
CGTTCTCGGATCTCCACAAAGCACAATTTGCTGGTACTTTTTGAGCGACACAGTCAATAATGGCAATAATACGTATGAAA
GAGGAGTTTATCGGACCAGGGCAAGGGCCC-GGGCT--------------------------------------------
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>chr4D_1502
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-------------------------------------------------------------------GCCACCATCTGCG
ACATCGACAGGCTCGCCTACGTCACTGCGGGGGCCAGGAGGTGGGTCGTCCTTGACCGCGTCCGTCTTGCCATCGGAGAC
CAGCTCATCGATGTCGTCTACCATCAAAATGGTCAAAATGGTATGGTTTACTGCCTCACTCGGCTTGGGAATGTCTATGT
GCTCCGCCTACCGGAACGCCGCCGTCGGGAACCAGTCATCATCGAGGACCAGACATCAACAGAGGATCTTGTATCGCGTA
ACAGGCGCATCATTCGAATGCACAATGCCGGACCGGACCTGAACGCGCCGGCTAGCGTGCAACCACTGCTCTTGTCTT--
-------------------CGGTGAGCAGTTTCGCCCCACTGTA-CGTCGCTGTTTCGGCTTTCAC--------------
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-----------------------------------GAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTGTACCAGAT
CTGGAGGAATGCTAGTTGTACGGTCACTTTGCATCTGGCGGGAGGCGGTCATCACCGTATAGAGGAGGATGAAATATTTG
TTCTCAAGTATGATCCCCGGCGCAGGCCTTGCTGGGACGCGGTGGCTGACTT---------GGGGGGATACTCGGTGTTT
GTTGGGAGGAG-CAATGCGGTGTCGATGCATGCTGAAGGTGTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTG
GGCGAG-GTAGGGATCAAGGCATGGTCTTTGACATGGGGACCGGGAAATCTAGACCTTGCCTCCCCCCTGCGGCTGGTGT
CGTTCCGGGGCCTCAACAGTGCACAATCTGCTGGTACTTTCTGAGGGAGGCAGTGAATAACTGC---AATACAAATGAAT
TAGGTGTTTATGGGACCCGAGCAAGGGTTC-GTGCTCAACGTGCACAAGCCATGTCACAGTGATGTGTCGCCAAGATAGC
TTGGTGACATAGTGAGCACCGCCGGCCTGGAAGTGATGTTTATCATGCATGACAAGAAATCTTGCAGAGTGTAATTGCTT
GTTGTGTCCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAAACCACTTTTCAACCCAATAGAACTGATGGAAGGATTAC
ATTTGCAGCCAATGGTAGAAACAATTTTTGAAGCTTCATTAGCAGCCAATGAAAGGGAAAAGGATGGTGAGAAGCTTGAG
AAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAATGTCTTGAGAACAATACATAATAAGTAATACATGGTAT
GTTGTGTTGGTTTTAGTTCCCATGCTTGGAT-------------------------------------------------
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>chr3B_1503
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--------------------------------------------------------------------CCGCCATCTGTG
ACATAGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGATGGGCCGTC---GACCCTGTCCACCTCGCT-TCCGGGAC
CAGCTCGTCGACCTCCTCTACCACGG---------AAATGGTATGGTCTACTGCGTCACTCGGTTTGGAGATGTCTACCT
ACTCCGCCTGCCACAGCGTCGCCGTCGGGAACCTATCATCCTCGAGTGCCACACACCAACACATTATCCAGTAGTGCATG
ACAAGCAGATCTTCCAAATGCATGGAACCGGACCGGACCTAAATGCGCGGGCCACCGTCGAGCCACTGTTGTCGTCTGTT
GGCAACCTAGCGTTCGACGCCGCCACCTGTTTCACTCCGCCATATCATCCTGGTCTCGATTTTTAC--------------
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-----------------------------------TAGTGCCAAGAACCTGGTGTTGTGCGAGGGTAACTTGTACCAAAT
CTGGAGGAATGCGACCTGCACGGTTACTTTGCAGCTACCAGGAGGGGGTCGCCGCCGTGTAGCACAGGATGAAATATTTG
TTATGAGGTATGATCCCCGGCGCCGGCCATGATGGGACGCCGTGGCCGACTT---------GGGAGGATACTCCATGTTT
GTCGGGAGGAA-CAATGCAGTGTCAATGTATGTAGAAGGTGCTCCGGGACTCATGGGTGATTGTGTGTACTGGATAGGTG
GAACCG-GTAGAGATTAGGGCATGGTCTTTGACATGAGGACTAGGAGGTCAACACCTTGCATTCCCCC------------
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>chr4D_1872
GGGGGGCAAACTTGGTGTTTATTGGGAGGAAACAATACGGTGCCGATGGACGCCAAAGGTGTTCCGGGACTCAAGGGTAA
CTGTGTCTACTGGATAGTCGTGGGAGAGTAGGGATCAATTGTGGTTTTGTCAAGGGGACCGGGAGGTCTACCCCTTGCCT
TCCCATGTCTGGTGTCGTTCCAAGGCCTCAATAAAGAATATTTTGTTGGTACTGTCTTAGCACATAGTTATACCTGCAAT
ACAAATAAAAGAAGAGTTTATTGCATCCAAGCAAGGGATCCGGGTTGAACGTGCACAACGCATGGAACAATGATCCTTCG
TCACTCGTCGGGACAACTTTGCGACATAGTGAGCACCACTAGCCACAATGGTGGAAGTGATGTTTTTCATGCGTGGGCAA
GGAGTCTGGCAGAATGTAGTTTCTTAGTGTGGCCAATCCTACCAATAAGTCGAGCAAGGTGGACAAAGACATATCGCATT
TGCATCCGATGGTGCAGAAATAGTCCGAGCTTCATTAAGAGCCAACGAGAGGAGAAAATATGCAGAGAATTTTGAGAAGA
ATAGAAGACTTGTGTATTTGTGTATGAGATGATTGGTGCATATTTTGATGTCTTGAGAAGAATAGAAGAAGTAGCAGCGT
TTCGGTACCCAGACTCATCTGCACCCGGTCAGAAAAAAATCAAAGAAAAATCCAATATTTTTGCATGGTAGAAAAGTTAG
TGTGTGAGGTCCGTTCCAATTTTCAAATCATTTGGACATCTGAAGCCATCAGCAAAAATACAACTCGGGTCAGAACAGTG
CATGAACAATAAACTTTTTTACAGGCCCCGAATTTATTTATTTTTGCCGAGAGCTGCTTAGAGGTCCGAATGATTTGAAA
ATTGAAGCGTACCTTGCGCATCAAATTATCGACCTTGCAAAAAAAGTTGGAATTTTTTGAATTTTCTAGTATTTACTTTG
ATTTGTTTCGTCAACGTAGGTGCAGATGAGCCTGCTCAGAAGCAGATTTTCAAAGTAGCATCAACAAGAATACATTGTAT
ATATCATGTTGTATTTTGGTTGAGTTTCCATGCTTCGATGATGTCTTATCTGTAGTGAAGTTATGCTCTTTATTAGTTAC
ATCTAGTTTCAACAATCCTATAGCTAGTTTGCTAGGAGAGTTTGCTATAACCTTACTTGTTCTTCATAACACCATTACTA
ATTTGACCTTTGACATAAGACTTTGTACACCATTCCTTTTCTTAACTAGAGAGCCAAACATTCTTGCTTTTCAACGCATA
TAACGTAGATCATATTCAATTTAATCCAACCTCATGAATTTGCATTGAATCAGACCTCCTGGAAAATTTCCTTTGTTCCA
AACATGCCAACTAGTGAACCATATAATCAAACAGTAAGGCATATTTTCCATGAAAATCCACTAAAAGAGCAATGTCAGTT
ATCCGAGGAGAATAGTAGATATTTCATGAGATCTATACTTTCTATCTATTTATTGTCAATAAAAAAAAGCATACACCACA
CAGCCACATATATCAAGATTTTTGTTAGACACATACACTCTAGAGCTCTATATCAATATATTTAAAGATGACAAAAAAAT
AAATGCATACAAATACATATGACATTTATAATGGTGCATATTAATAATATACAATACAATTGTGTCACTAGTATTGTCTT
ACATCGAGAAACATTCAATTCAACCAACATTTTCTTCCTTCTAAACATAATTTATGAAATTAAAACATAATGCTTGATGC
AAAAATATAATTTTAATTTAGCAGAATGTATAGTTTTAATTGTACGAAGATTTCTGACCACAGCCACCTCGTAGGGCAGA
ATAAATAGATTTGGTAATTGTAACCTAGATTGTTATGTTTTAAGGTTTAGCAGCACCATCATGTGTTAATTGTGCTATAA
ATATACTACAAATTGTAATAGTGTGTGTTAATAAGTTAATCAAAATAAGCAAAAAAGTTCAATATAAATAACCAAAGAAT
GGAGGGGTGTCTTCCTAGGGTGTGTTTGGTTGAAGGAATGAAGTGGAATGTAACGGTTTGGACCCGCACCTGAGAGTGGT
TCTCATGTTTAGTTGAAAAACAGAGTGGAATGCACTGGTTCTTTGGAGAGGAATATTCCACCTATATGCCGAATAGAGTG
GTTCCTCCAAATTGAGCGGACCACGAACTCTGCGCTGCTCCCTCGCTCGCCCACGAACTCCGCCCCTCTCTCTCTCTCTT
CCCTCTGACTACATGCCCCGCTGGAGCTTCGTCGCCGGTGGAGGTGATCGACAGCCGCCAGTAATTAGAAGTCGCGGGCG
CCGCGTCCGCGCTCCGTGCGCCGGCCGTGTCGAGCCGATGGAGGTCGGGGAAGCTGCTGCGGGTGAGGCCGGGGAGCCAC
GCTGTCGCGCATTCCTCCTGATCGTGGGCGTATTCTGCAGAGCAGTGTCCGATCTGATAAGCGGAGCAACGGCGCCCAAT
CTGGGTGTTAGATTCATTACTATGTAATCTAGATTATTGACTCTAGTGCAAGTGGGAGACTGTTGGAAATATGCCTTAGA
GGCAATAATACAGTGATTATTATTATATTATATTTCCTTAAATAAATGTGTGAATACATAAACAAATACCAAGTCCCTAG
TAAGCCACTACTTGACTAGCTCGTTAATCAAAAGATGGTTAAGGTTTCCTAACTATCGACATGAGTTGTCATTTGACAAC
GGGATCACGCCATTAGGAGAATGATGTGATGGACAAGACCCATTCGTTAGCATAGCATATGATCGTTCAATTTATTGCTA
CTGCTTTCTTAATGTCAAATACATGCTTGTTAGACCATGTAATCATGCAACTCCCGGACTCCGGAGGAATGCTTTGTGTG
TATCAAACGTCACTTCGTAACTGGAGTTAATCTCTAAATTTGTATGTCTACCCCCTTCAATGCTCTACATGTTCGACTGG
CCTCTTTTATGAACTTCCTGCTTCGTCGCTTTTTTTGCGAGAAAACTTCCGGTCTATTCATCATGACATGACAATACCAA
GAACTAGCTATATACTAATTCAGCTTAAAATTTGTATCTCTAAGCCCTTGAGTGCTCTATATGTTCGATTGGCCCCCTCT
TATGAACTTCCTGGCTCCGTCCCTTTTCTCTTTCGAAAAAAAAACTTCCGCTCTATTCATCATGTCATGATAGTATCAAA
AAACAGAAATAAAAAAATTGCATCCATATGTGTAGATCCCCTATCGTGTCTTTTTTTCTTGCTAGGGATATCTGCGTGAG
TGCTTGCCTCCGGAATTGTCGGCCGGCCGGAATCCTATGGCTACGGGAACCGACCGGTAGAATCTGAAATGGGTCACGTG
CATGCATGGTTGGACGACCGATCAACCATCTTTGGACGTATACCTACGTCCGTCGGATAGATGCTTCCATCGGTACGTCC
CCATGACTCAGTCATGCCATGCACGCGCACAACACTCCAAACAATATATTTGCAACGTACACAAAGCGCACGTCGAAGCA
TCCAAGGTCAATCATGCATATCGATCAGCTCTCAAACGGCTAGCTACATGCATGCATGGGTATGGTATCCAATGAAACGC
TTCTTTGGCATGCATTCGTACGTGCACCGACACCAGCCTGCGTGCACGTACACGCAGCTTAAATGACGGCATTACCATCG
CTACTCCTCAAAGTACTCCCTCTGTAAATTAATATAAGAGCGTTTAGATTACTAAAATAATGATCTAAACGCTCTTATAT
TAGTTTACGGAGGGAGTACGTGACTAGCTTGCACTAATTGTAGGTAGCACTCCACAAAGCTAGCAAAGCCATGGCGGCGT
TACCACCCCTACTCCTCACTATCCCTGTCGACAAGCCCGCAGCCATGGCCACGCAGCCACCGCTACTCCTCACTATCCCT
GTCGACGACGGCTACCACACGCCCACCTCGCCGCCGCCCACACAGCCCATATGAAGGCGGGCCATCTGCAACACCCATAG
GCTCACATACCTCACCGCATGGAAATGCTACAGTCTACTGCCTCACTTGTTTCAAAGATGTCCACATGCTCCGCCTGGTC
GAGCACCACTGTTGGCGCCCAGAACCTATCATCATAGAGGACCTAACATCAACACACCCTACATTGTATAACATGCACTT
CGTCGTTCAAATGCACGGGCCGTATCGGACCTAAATGTGTCGGTCAAGGTCGAGCCATTCCTGTCATCTATAGGCAACCT
TCAGTTCGACCATACGACACGGTCTAGCATTTCATGAGTGTCGAGAAGCTGGTCTTGTGTAATGGAAACCTCTATCAGAT
TTGGAGGAATGCCAGTTGCAGGGTTACTTTGCAGCTGCCAGGAGGCGGTCACCGCCATGCAACAAATGATGAATTATTTT
CTCTGAGCTACGATCCTCGGCACCGTCCATGCTGGCACGTCATGGCCAAATTTGTGGGGGGGGGGGGGTACTCGGTGTTT
ATTGGGAGGAAACAATACAGTGCCGATGAAAGCCGAAGGTGTTCCGGGACTCAAGGGTAACTGTGTCTACTGGATAGGTG
CGGAAGAGTAGGGATCAATTC-TGGTGTTTGTCAAGGGGACCGGGAGGTCTACCGCTTACCTTCCCGT---GTCTGGTGT
CGTTCAAAGGCCTCAATAAACAATATTTTGTTGGTACTGTCTTAGCAACATAGTAAATACCTAC---AATACAAATGAAA
GAAGAGTTTATTGGATCCAAGCAAGGGGTCAGGGTTGAACGTGCACAAGGCATGGAATAATGAT----------------
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>SNPs
SSSSSSSSSSS-SSS-SSSS---SSSSSSSSSSSS-SSSSSS-SSSSSS-S-S-SSSSSSS-SSSSSSS---S-SSSS--
SSSSSS---SSSSSSSS-SS-S-S-S-S--SSS-S-S--SSSSSSSS---SS-S-SS-S----SSSSS-SSSSSSSSSS-
--S---S-SSSSSSSSSS-S--SSSSS----S--SSSS-SSSSSS-SSSS-SSSSSS-SSSSSSS-SSSSS-SS-S--SS
-SSSS-SSSSS--S-SSS-S-SSSS-SS-SSSSSSSS-SSSSSS------SSSSSSSSSS--SSSS-S--SSSSSSSSS-
S-SSS-SSSSSSSSSSSS-SSSSSSSS-S-SSSSSSSSS-SSSS-S-SSSSSSSSSS-SSSSSSSSSSS-S-S-SSSSS-
SS-S-S--SSSSS-SS-SSSSSSS-S--SSSS-----SSSSSS--S-S--SSSS---SSSSSSS--S-SSSSSSSSSSSS
S-S-SSSSSSSSSSS-SSSS--SSSSSS-S-SSSSS-SSSSSS--SSSSSSSS--SSSS-SSS-SS-SSSSSSS-SS-SS
-S-SSSSS-S-SSS-SSSS--S-S-SSSSSSS--SS-SSSS--SS-SS-S-S-SSSSSS-SSS-S-S--SSSS-SSSSSS
SSSSSSSSSS-SS--SSSSSSS-SSSSSSSSSSS-SSS-SS-SSSSS-SS-SSSSSSSSSS-SSSSSSSSSS-SSS-SSS
-S-S-SSSS-SSSSSSSSSSS-SSSS-SSS-S-S-SSSSSS-SS-SSSSSS-SSS-S--SSSS--SSSSSSSSS-S-S-S
SSSSSSSSSS-SS-SSS--S-S-SSSSSSS-SS-SSSSS-S-SSSS-SSSSS-SSSSSSSS-SSSSSS-SS--SS-SSSS
SSSSS-------------S-------------------S-----------------------------------------
----------------S--------S----------------------------------------------S-------
--------------------------------------------------------S---------------------S-
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------------------S-------S---S-------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------S-----------------
---------------------------S----------------------------------------------------
-------------------------------------------------------------------S-----S------
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-----------------------------------S-----------------------------------S--------
-S------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
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---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_650
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----------------------------------------------------------------------ACTGGTAGTG
CATCTCGGTG----------------------------------------------------------------------
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>reverse_4276
--------------------------------------------------------------------------------
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-----------------------------------AAGTGCCAAGAACCTGGTGT-------------------------
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>forward_1828
--------------------------------------------------------------------------------
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-------------------------------------------------GGCTAGCGTGCAACCACTA------------
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>reverse_5277
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----------------------------------------------------------------------------CCTT
GTTCGGTGCAGGTACT----------------------------------------------------------------
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------------------------
