>input_sequence_53317
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----------------------------------------------ACACCTGGCTAAAGGCCCTCGCGTTCATCGTCGC
AAACCGTTTCCGCCACGCCGCCGA---CGATGACCACCCGCTGCTCACCCACCACCCTTAG-------GACCTAGTGCCG
TTTCTCGAGATGCCCTACCGCCAGCTCCACCCTCTTGCTGGTCTCGAGAAGCTTGCCTCACCTAGGCTCCTCACCACCCA
CATGTCGATCACATTGCTACCTCCGTCCGTGTCTAATCTTGGTTGCCGTGTTGTGTACCTGTGCCACAATCCCAATGACG
TGTTTGTGTCCTTATGGCACTTCACCAACAAGGTAGGCGTGGACTACACCATTCCCATGGATAAAGCATTTGAGTTGTTT
TCCGATGGGCTGTCCCCGTATGGGCCTATATGGGAACACAATCTTGGTTTATGGAAGAAAAGCATAGTGGGGAGCGACAA
TGTCCGTTTCTTGAAGTATGACAAGATGATGGCCGAACTGGTCAAGCACGTCAATATGCTCGCCAAGTTCCTTTGTGTCC
CCTTCACCAAGGAGGAGGTGAGCCGAAGAGTCGTGGAGGATGTCATGCACCGGTGTAGCTTCGATAAGCTCAAGAGCTTA
CCAATCAATTCATTAGGAGCAATTGATAGGATTGGCGGGCTGCCAATGGAGAAATTTGCCTACTTTAGGACTGGGAAGGT
CGGTGACTGGACAAACCACTTGACAGAAGAGATGGCAAATAAGCTGGATTCCATTGTCGAGGAGAAGTTGAGAGGACATG
GTCTCACATTTTGACATCTCAGTGTCATGCTTAGCTATGTGTGTGTTCGTGCAACCAAAATAAGTGTGAAATACTATGTA
CTTTG---------------------------------------------------------------------------
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-------------------------------------ATGTTTTGTTAACATTTTTTTGTCTCATTGATTTT--GTTGCC
TTTTGAGATATGAGCACAACCTTTGTGATGCCAT--TTGAGGAGAAGTTGAGAGGATCAGGTCTCAGATGTTGACTTATC
G-TTGTTATGCTAAACTATGCAAGTGCTCGTGCAACCAAAAATGTGTGTTCTCAATAATAATGTGAAACATTGTATTTTG
ATGTTTTGCTAACCCTATTGTCTTGTTTTGTTTTGTTTTGTTTTCATTGACTCTACTATCCTTTCGACATATGAGCAATA
GAGCAAAACTTATGTTTAAAAGATGGTTGCGTAAATTATTATGGTTTTATAAAGA----------ATGAACTAGTGGTTC
AATTTTAACTTTGAAGATTATGTTGATGAAAACTACTATCGGGGAATTGGAGGGAGTAGTTCAAGAATCGTTTTACGCAT
ACCTAACACCATGTGGTCCAAAGAAGCTC---------------------------------------------------
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------------------------------------------ATAGCCCAGCCCACCCGTGACTCATACACTCATTTGTA
TTACCCCACTTTGATGAGTTGGATCAACAAAGCCTATATGGGAATAAA--------------------------------
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>chr3B_1_TraesCS3B01G467000
ATTGGCACTTTGCACTAATCTGAAGAGGAGAGGTATGAGGCTGGAGCACTCTAGCTGCTTCATTTGCGGGAGGGCGGAGG
AGGATGGGGCACACCTGTTTATAAAATGCAAGTTGGTCAAGGAAGGATGGCGAGCACTGGGCCTTGAGCAGGAACGCATG
CAGCTTGAGAGAATCA-GGGGGTGCATGCAATGCTTGATAAGTTGTGGGAGCTGGATGAAAGGAAAAGGATGCTTATATT
AATTTTTTTGTGGCATTGGTGGAACAACAGGAACAAGATTCGAGAAGGGGAGCTTCCAGTCGCTACATT-AGAGATAGTT
AGGCAAGTGAG-------ATGTGATGCAATGGAATATGAGGAAGTGTATACTCTATCAGGTAAAATGACCTCAGCTATAT
GGCAGGCACCTGCTCATGGTGACATCAAAGTCAACCTTGATGGGGCCTTTACACCTGGGAGTAGTGTTGGAGGATGGGCC
ATTTTGGCCAGGGATGATGAGGGGCATGTGATAGTAGCTCGCGCCGGTCGACAAGACCACACTCCCGATGCCTTTGCTAC
TGTGGTTAGCACAATGGCCGCAGCGGTGGCGACAACAGCTGACATTGGTGCCACTAGAGT--------------------
-------------TGCTTTAGACATTTGGAAGGCGGGTTCCTCACCCTTTGCTGCAGTAATCGAAGACATAAAACTCCAA
CTTAAGATGTGGTTCTCAAAATTCACTGTACGAGCTTGCCATAGAGAGGCAAATTCTGTTGCGCATGAATTAGCTCAAAT
AGGTCGTATGTGTTTACCAAATAATTGTATGGAGTATAACACAACTGTACCGCCCACTGTGGCTAATCGCGTGTTGGGCG
ATATGCCCAAGCACCGTTAATTAATCTATAAAGTTATGCTTTGCCTTCAAAAAAAAAGGC--------------------
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-----------------------TACTGGTTGAGACCCCACAAC-TGCAAAGCGTCATGCTCGTGCAAGAGTGCTTCGAG
GCTCGCCCCGATAACACCTTCCTTGTCACGTTCCCAAAGTGCAACCACACCTGGCTAAAGGCCCTCGCGTTCATCGTCGC
AAACCGTTTCCGCCACGCCGCCGA---CGATGACCACCCGCTGCTCACCCACCACCCTTAG-------GACCTAGTGCCG
TTTCTCGAGATGCCCTACCGCCAGCTCCACCCTCTTGCTGGTCTCGAGAAGCTTGCCTCACCTAGGCTCCTCACCACCCA
CATGTCGATCACATTGCTACCTCCGTCCGTGTCTAATCTTGGTTGCCGTGTTGTGTACCTGTGCCACAATCCCAATGACG
TGTTTGTGTCCTTATGGCACTTCACCAACAAGGTAGGCGTGGACTACACCATTCCCATGGATAAAGCATTTGAGTTGTTT
TCCGATGGGCTGTCCCCGTATGGGCCTATATGGGAACACAATCTTGGTTTATGGAAGAAAAGCATAGTGGGGAGCGACAA
TGTCCGTTTCTTGAAGTATGACAAGATGATGGCCGAACTGGTCAAGCACGTCAATATGCTCGCCAAGTTCCTTTGTGTCC
CCTTCACCAAGGAGGAGGTGAGCCGAAGAGTCGTGGAGGATGTCATGCACCGGTGTAGCTTCGATAAGCTCAAGAGCTTA
CCAATCAATTCATTAGGAGCAATTGATAGGATTGGCGGGCTGCCAATGGAGAAATTTGCCTACTTTAGGACTGGGAAGGT
CGGTGACTGGACAAACCACTTGACAGAAGAGATGGCAAATAAGCTGGATTCCATTGTCGAGGAGAAGTTGAGAGGACATG
GTCTCACATTTTGACATCTCAGTGTCATGCTTAGCTATGTGTGTGTTCGTGCAACCAAAATAAGTGTGAAATACTATGTA
CTTTG---------------------------------------------------------------------------
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-------------------------------------ATGTTTTGTTAACATTTTTTTGTCTCATTGATTTT--GTTGCC
TTTTGAGATATGAGCACAACCTTTGTGATGCCAT--TTGAGGAGAAGTTGAGAGGATCAGGTCTCAGATGTTGACTTATC
G-TTGTTATGCTAAACTATGCAAGTGCTCGTGCAACCAAAAATGTGTGTTCTCAATAATAATGTGAAACATTGTATTTTG
ATGTTTTGCTAACCCTATTGTCTTGTTTTGTTTTGTTTTGTTTTCATTGACTCTACTATCCTTTCGACATATGAGCAATA
GAGCAAAACTTATGTTTAAAAGATGGTTGCGTAAATTATTATGGTTTTATAAAGA----------ATGAACTAGTGGTTC
AATTTTAACTTTGAAGATTATGTTGATGAAAACTACTATCGGGGAATTGGAGGGAGTAGTTCAAGAATCGTTTTACGCAT
ACCTAACACCATGTGGTCCAAAGAAGCTC---------------------------------------------------
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------------------------------------------ATAGCCCAGCCCACCCGTGACTCATACACTCATTTGTA
TTACCCCACTTTGATGAGTTGGATCAACAAAGCCTATATGGGAATAAAATGGGAGTGACTATTTTTCAATCAACATAGGA
ATAGTTATTTCTCAATTAGCATTTATAGTCATGGTGATCCACTATCTCCAATATTATTTAACATTGTCATGGACATGCTA
ACTGCTTTGATCGGAGGCACCAAAAAAACAACCAAATTATGGG-AGTAGTGCCACATCTCGTGGACTCTCAATATTACAA
TATGTG-GAGAACACAATTTAATTTATGGAACATGACGTGAATAAGGATAGGAATCTAAAACTATTGTTGTTAGCTTTGG
CGCAAACGTCAGATCTTAAAATTAATATTCATAAAAGTGAATTGCTTTGCTTCACAAAAGCCAAAGAGGCGGAAGCACAA
TACACTAACTTATTTGGTTGTC--------------------------------------------------CACAAGGC
CAATTACCATTTAAATATTTGATAATTCTAATGCATTATCAACTTCTCACTTGTGTAGAGTGCAAATTTGTCGAAGAGTG
CTTAGAGAAATGTTTGAACAGATGAAAATGCAAGTTGCTTTCCATTGGTGGACAACTGGTGTTGATCAACTATGTTTTCA
TGAAAATGGTTCTCTACATGCTCTCATTGTTTCAACTTTCCAAAGGGAT-CTACAAAAACTGAATT----CATATCGAGA
TTCTTTTCG---GGAAATAGTGAAAACAAAAAGTATGGA-CTAACCAAATGAAGTGTGGTTTGTCGACTAGAAGACCAGG
GAGGTCTAGGTACCCAAGACTTCCAGGCCAAGAATGACTCCTTACTTAGTAAATGGCTCTTCAAGCTACTTACCGACGGT
GGTGTTTGAGACACTTTACTATGCAAGAAGTATCTAGGCCAGGAAGTTGTGTCCCGAACATTCTAGAAGCCTGGTGGTTC
ATATTTATTGGTT-GGCCTAGTGGCAACAAAGAAACATTTTTTTTTGCTTTGGATCTTTCAGAATAAAGGAAGACTCCGA
GATACATCTCTGAGAGGACAAATGACTAGGAAACATCACACTCCGGGAACATCATACAACCTTGTACCAC
>chr3B_1
ATTGGCACTATGCACTAATCTGAAGAGGAGAGGTATGAGGCTAGAGTGTTCTAGCTGTTTCAGCTGCGGGAGAGCGGAGG
AAGATGGGGCGCACCTGTTCATAAAATGCAAGCTGGTGAAGGAAGGGTGGCGAGCACTTGGGCTGGAGCATGAGCGCATG
CAGCTCGAGAGCATTA-GGGGGTGCATGCAATGCTGGATAAATTGTGGGAGCTGCATGAGAGGAAAATGATGCTTATTAT
AATCTTTTGGTGGCATTGGTGGAACAACCGGAACAAAATTCGAGAAGGAGAACTGCCAATTGCTACATC-AGAGATCGTA
AGGCGAGCAAA-------ATGTGATGCAATGGAGTATGAGGAGGTATACTCTCCGTCAGGTAAAAATACCACAGCTAGAT
GGCAGGCACCTTCTCAAGGGGAGATCAAGTTCAACCTTGATGGGGCATTTACACCTGGTGGCAGTATTGGAGGATGGGGA
GTGGTGGCCAGAGACAACGAGGGGCATATGATAATAGCTCGAGCCGGTCGACAAGACAACACTCCGGATGCCTTCGCTGC
TGAGGCTGGCACGATGGCTGCAGCGGTTCAAATAGCAGCTGGAATTGGTGCCACTCGAGCGGTTTTTGAAACTGACTCTC
AATTGCTTGCTGATGCTCTGGACATGTGGAAGGCCGATTCCTCACCTTATGCTGCGGTGATCGAAGACATAAAACTCCAA
CTTAAGTTGTGGTTTACAAAGTTCACTGTACGAGCTTGTAGGCGAGAGCCAAATTCTGTTGCACATGAATTAGCTCAAAT
AGGTCGTATGTGTT-----------------GAGTGGACCATAACTGTACCGCCCACTGTGGCTGATCGTGTGTTGAGTG
ATATGCCCAACCACAG----TTAATCTATAAAGCTATGCTTTGCCTTAAAAAAAA-------------------------
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>chr5B_1
ATTGGCACTATGCACTAATCTGAAGAGGAGAGGTATGAGGCTAGAGCGTTCTAGCTGTTTCAGCTGCGGGAGAGCGGAGG
AAGATGGGGCGCACTTGTTCATAAAATGCAAGCTAGTGAAGAAAGGGTGGCGAGCACTTGGGCTGGAGCGCGAGCGCATG
CAGCTCGAGAGCATCAGGGGGGTGCATGCAATGCTGGATAAATTGTGGGAGCTACATGAGAGGAAAAGGATGCTTATTAT
AATCTTTTGGTGGCATTGGTGGAACAACCGGAACAAAATTCGAGAAGGGGAGCTGCCAATCGCTACATTTAGAGATCGTA
AGGCGAGCAAAAAGCAAAATGTGATGCAATGAAGTATGAAGAGGTATACTCTCCGTCAGGTAAAAATACCACAGCTAGAT
GGCAGGCACCTGCTCAAGGGGAGATCAAGTTCAACCTTGATGGGGCATTTACACCTGGTGGCAGTATTGGAGGATGGGGA
GTGGTGGCCAGAGACCACGAGGGGCATGTGATAATAGCTCGAGCCGGTCGACAAGACAACATTCCGGATGCCTTCGCTGT
TGAGGCTGGCGTGATGGCTGCAGCGGTACAAATAGCAACTGACATTGGTGTCACTCGAGCGGTTTTTGAAACCGACTCTC
AATTGTTTGCTGATGCTTTGGACGTTTGGAAGGCCGATTCCTCACCTTATGCTGCGGTGATCGAAGACATAAAACTCCAA
CTTAAGTTGTGGTTTACAAAGTTCACTGTACGAGCTTGTAGGCGAGAGGCAAATTCTGTTGCGCATGAATTAGCTCAAAT
AAGTCGTATGTGTTTACCAGATATCAGTATGGAGTGGACCACAACTGTACCGCCCATTGTGGTTGATCGTGTGTTGAGCG
ATATGCCCAACCACAG----TTAATCTATAAAGCTATACTTTGCCTTAAAAAAAA-------------------------
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>chr7D_5
----GCACTGTGCACTAATCTGAAGAGGAGAGGTATGAGGCTGGAACGCTGTAGCTGCTTCATCTGCGGAAGGGCGGAGG
AGGATGGGGCGCACCTGTTTATAAAATGCAAGCTGGTCAAGGAAGGATGGCGAGCACTGGGCCTTGAGCAGGAACGCATG
CAGCTTGAGAGCATCA-GGGGGTGCATGCAATGCTTGATAAGTTGTGGGAGCTGGATGAGAGAAAAAGGATGCTTATAGT
ATTTTTTTGGTGGCATTGGTGGAACAACAGGAACAAGATTCGAGAAGGGGAGCTGCTAGTCGCTACATC-AGAGATAGTT
AGGCGAGCGAG-------ATGTGATGCAATGGAGTATGAGGAAGTGTATACCCCGTCAGGTAAGACGACCTCAGCTGTAT
GGCAGGCACCTGCTAATGATGAGATCAAAATCAACCTTGACGGGGCCTTTACACCTGGGAGTAGTATTGGAGGATGGGGC
GTTGTGGCCAGGGATGATGAGGGGCATGTGATAGTAGCTCACGCCAGTCGGCAAGACCACACTCCGGATGCCTTTGCTGC
TGAGGTTAGCGCGATGGCCGCAGCGGTAGCGACAACAGCTGACATTGGTGCCATTAGAGTTGTTTTTGAAACAGACTCGC
AATTGCTTGCGGATGCTTTGGACATCTGGAAGGCGGATTCCTCACCCTTTGCTGCAGTAATTGAAGACATAAAACTCCAA
CTCAAGATGTGGTTCTCAAAGTTCACTGTACGAGCCTGCCATCGAGAGGCAAATTCTGTTGCGCATGAATTAGCTCAAAT
AGGTCGTATGTGTTTACCAAATAATTGTATGGAGTGGAACACCACTGTACCGCCCACTGTGGCTGATCGTGTGTG-----
---TGCCCAACCACCG----TTAATCTATAAAGCTATGCTTTGCCTTAAATAAA--------------------------
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>chr3B_894
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-------------------------------------------------------AAGGC--------------------
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-----------------------TGCTGGCTGAGACCCCTGGCCGTGCAGAGCGTCAAGATCGTGCAGGAGCAGTTCGAG
GCGCGCCCCGACGACATCCTCCTCGTCACGTACCCAAAGTGCAGCACCACCTGGCTCAAGGCCCTCGTCTTCACCATCAC
CAACCGCTTTCGCCACGCCATCACCGGCGACGACCACCCGCTGCTCACCCACCACCCTCAG-------GACCTCGTGCCA
TTTCTCGAGATGCCCTACCGTCAGCTCCACCCTCTCTCCGATCTCGAGAAGCTCCCCTCCCCAAGGCTCCTCTCCACCCA
TTTTCCGGTCACGCTGCTGCCTCCGTGCGTGGTGACCCTTGGTTGCCGAGTTGTGTACTTATGTCGCAGTCCCAAGGATG
TGCTCGTGTCTTTATGGCACTTCATCTACAAGGTAAACAAGAACTACT------CCATAGATAAAGCATTTGAGTTGTTT
TCCAAGGGAGAATCCTCGTATGGGCCTATATGGGAACACAATCTTGGGTTCTGGAAGGAAAGCATATCAAACAGCGATAG
AGTTCTCTTCTTGAAGTATGATGAGATGATGGCCCAGCTGGTCAAGCATGTCAAGATGCTCGCCGAGTTCCTCCGTGTTC
CCTTCACGGAGGAGGAGGTGAGATGTGGAGTTGTGGAGGAGATCGTGCACTTGTGTAGCTTCGATAAGCTCAAAAGCATG
CCGGTCAACTCATCCGGTGTATCTGATAGGATTGGCGGGGAGCCAATGGAGAATTCTTCCTTCTTTAGGACTGCCAAGGT
TGGTGACTGGGCAAATTACTTGACTGAAGAGATGGCAAAGAAGTTGGATGGCATTGT-----------------------
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-------------------------------------TGAGGAGAAGTTGAGCGGGTCAGATCTTACATTTTGACATCT-
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>chr3A_894
AAGGCTGCTGGCTGCGACCCCGGGCCATGCAAAGCGTCAAGTTGGTGCAAGAGCACTTCAAGGCTCGCCCCGACGACACC
CTCCTCGCCACGTTCCCGAAGTGCGGCACCACCTGGCTCAAGGCCCTTGCCTTTACCATTACAAACCGCTTCGACCACGC
CGCCACCAATGACACCCACCCGCTGCTCACCCGCCACCCTCAGGACCTCGTGCCATTCCTCGAGATGCCCTACCGCCAGC
TCCACCCTATCGCCGACCTCGAGAAGCTCGCCTCCCCGAGGCTCCTCGCCACCCACATGCCGATCACACTGCTACCTCCG
TGCATGTCCAGCCTAAGTTGCCGTGTTGTGTACCTATTCCGCGATCCCAAGGATGTGTTCGTGTCCCTGTGGCAGTTCTC
CAGCAAGGTACACACGGAGTACACCATTGATAGAGCATTTGATTCGTTTCCGAGGGGCTATCCCTGTACGGGCCTATCTG
GAAGCACAACCTTGAGTTCTGGAAGAAAAGCATAGCAGAGAGTGACAAAGTTCTTTTCTTGAAGTATGAGGAGATGAGGG
CCGAACCGGTCAAGCACGTCAAGATGCTCGCCAAGTTCCTCGGTGTCCCCTTCACCGAGGAGGAGATGAGATGTGGAGTG
GTAGAGGGTGTCGTGCACCTGTGTAGCTTCGATACGCTCAGGAGCATGCCGGTCAACTCATCGGGAGTAATGATAGGATT
GGTGGGGTGCCAATGGAGAACTCTTCCTACTTTAGGGCCGGAAAGGTCGGTGACTGGGCAAACCACTTGACGGAAGAGAT
GTCAAAGAAGCTGGATGTCATTGTTGAGGAGAAGCTGAGAGGATCAGGTCTCACATTTTGACATCTCGGTGTCATGTTGA
ACTATGTGCATGCTTGTGCAACCAAAATGTGTGTTCTCAATAATAATGTGAAAGACTATGTACATGATGTTTTGTTAACC
TTTTGTTTTCCCTTGTTGACTATGTTGCCTTTTGAGATACGAGCAAAACTTTTGTGCAAAAGGTGATGCGAGTTGATGGC
AACTGCTATGGGGACCGTAACACCTCATGGTCCCAAAAAACTGATCGCCCAGCTCAACCAATAAACTACTACAAGAGTGG
TTGCTAGCAGATCCCCTAAAATTAAAATTTCCTTAAATCCCCCCCCCCAAAAAAAATCTCCCAGTCTCCTAGTTTTAGTC
TAGCTGTAGGCGTTCTCAAGAAAAGTTCCGCACCCTCCCGCTCGGCCTCAGCTTTCCTGCCCAACACCGACGCTGCCGCC
CCTTACCGCGACACTGGTCGTCCTCGGGCCCGATGACCGGCGGAACATAAAGACACTCCCCCGTTGCACCCTGGGCCACC
CCCGCCGGTGCCAGAGACCTATCACCGACGAAGAATTTGGTGCCACAACACCGAAACGATGACGACAAGGGATTTACTTC
ATCGACAAAGGTTCGTCGTCGATGACTATTGTCACTTACACAACCGCAACCTACCTATCACCCTTTCTCGAGCCGGCTGA
CAAACGGCAACGTCGGCTAAGGCGAAGGACAACACGACATGGTCTCCTGCTGCCATGCCACCACCCTTTTCACCTCCGGT
TTTCGAGGATGGCTTGGATCCGGACCAGACCACGAGCGAGGCCAATGTTCTTGAGGATATGCTCGAGAGTTTTTTTTTCC
TTTTTGGTTTGCAATTACTTTAGAGAGTGATGCATGATTTGATATTAATTGCTAGGTTCCTTTTGCTTTTGTAGTGAGCA
ATTGAATGATGATGCCACCACTTTAATGGAAGAATTTAATGTAACCCACAACTTTGGCCTCAATGACATTGCCATGTCAA
TGCGACATACCCAAACGAGAAATGCCAAGGTAGTGGAGGAGGTTGAGGAAACTCAAATAAACAAGAAAAGGGGTGTAGGT
CGTGCAACTACAAGACCGAGGAAGAAAATGTTTGTGTGAATCTTGGGTGAACATCACTCTCGATGCCACGGTCGGTGCCG
ACAAAATAAAGGATAAATTTTGGCAAAGGATCGACGTGTAATACAATAACAATGAGACTATTTCCATATCAAAGGATTGA
GAAGGAACTTTGAAGCCACACCAAAGAGACAAAGGCTCAACACCAATGTTGATGATAATGACTTGGTAGAGAACCTATCC
ACTCATGTGTTTTCGGATGGATCAAAATATGGAAATAATGTCAAGAAGAATGGTGTGTCACAACATAAAAAAGAAAAGTT
GATTGCAATGGTGGAGGTGAAAAGGGCATTAGCGGCCGAACAGAAGGAGGAGAAGATGGCTTGTTTCTATGAGATGAAGT
TGATGGAAGAGGAGAACTGGAAGGCAAAGATGACAACCGAGGATAGAAAGGTGCTACCGAAGGGAGAAACAAATTGAACT
AGAGGAGAAAATATTGTTTCAATTGGAGGGTGAGAAAAAGAAAAGGGAAATATTGTGATTGAGGAGCAAAGCTTGCAATG
GTGGCCGAGGAGCAACGGAACAAGAGGTTGGCTGAGGAACATGCTACCATGTGGATGGATCCTAGCAGGATGCATGACAA
GGCAAGATAATATTAAGAGTTCACTCGTGGGGACATCTTGGCTAAGTTGTGTGGTGGCGGCGGCAGTGGTGCTGCCGACG
GTGACGACACGAGTGATTGAGGTCCATTTGAACTACGATAGCTTTTGCTCCACCATGTATTAATGTTTATTTGGAATGAA
TGTGCCTTTTAGCACACATTATGGCTATGTTTGAAGGATTCAACAAACTTAATTTCCGTTCGTAGTTGAATTATGATTTG
TCAGCATCTGAATTCTCTATGTTCGTATTGAAATATGATGAATTTGTTTGAGTAAACATTTTAAAGAATTGGCAAAATGA
TAATTTTATGATAGGGAATCTGCTAGCTATGCAAAAGTAATTCCCTAAATAAATTAGGAAAATGGGATAAAGAAGATTTT
TGACTTTTAGAATAGGGGATCTGGTAGAGATGCCCTCAGGGAAGTTTATGACAATGCAATTAGTCTTTTTCAGGGAATGT
CAGTGCTATTTGTCATTTGTGGAATTATAACTGCTAGCAAAAACATGTGCACGTGTTACACAACTCGTCCAATAAGCCAT
GAACATGGTATGGTGGCAAGTGAGGAGTAAAATCCCCGCAAGTAATCTTGCGGTTCATAGGAATGGAAGATTTAGATGAG
CAACTACTAAGTTACTAAGCAACCTACAAATGATGGGTTGCGGTGGCTTGGGGCTACGGGGATCATTCGTGGGGCTTGTT
TGTAAGAGTGTACTTCGTTGTGTGAGGGGTTATGGGCATACTCGCCGGTAACTGTGGTGTTCGTGTAGGGCTCATGAGAA
CATCACCAGTACGCCAACGTTGCGACATGTAACAACAACACGACGACCCATCCAACGCCTTTTCTTCACCACGAAGGCCA
TACCCATAATGTGGAAAGAACACCGGTCAATGAAACGATATCAAAGCACATGTAAAATTTCATTTAAAAAATACAAAAAC
ACATTTTGATTTTTTTTTTAAAAAATCTGAAAAAAAATTACACATGAACCTATGGATGTGTAGTACACGCCTTAAATTTT
CATGAAGAAATACGTTCTGGTTCAAGCTACACACAAGAAAACATGTCTTCCTAGCACATGAAATCTATTCATTATAAAAG
TCTGATTTTCTTTATACAGCTCACACTAATGCGTATTTGATCATGAAACCTTTTACAGAAATGTAGTATACATCTAAATG
TTCATCTCTATTTATTTTCAGATTTTTTGAAACTTTAAAACATTATTTGTGAAGTTTTCAGAAACAGGGCTCCATGGAGC
TCAGGAGCAAGAAATCCACTCTCCCCGAATAATTCATTTTTTTTACTTTGTTTGGTTTGGCTCACTGCGCTCAAGTTAAT
CATGTACAGCTCAACCGCTCAAGTGTCGCCTTGGGTAAGCATATCCGGCGCCCACTTTGACAGTCATGTGCAATTAAACT
ATAGAGCTCGTGGTACATGCGCACAATTCAATACTAGGGCCGACATGCTAGTTTAATGTTTTCCCTTTGTCTATAGCCCC
TTATACAAATACCAATGCTACATCTGGTCGTGCTCACTATCAAAATCACCCACCAACCCCAGCTCATCTCAAAAATTGGC
CATGGCAGGAGCTCAAAGCGAGAGCAACCATACCAGCATCATGGAGGAAGGACAAGCGAGCCATGTTGCAGAGGTGCGAG
GAGGCTGGGTCCTGTATCAAGGCTGCTGGCTGAGACCCCACAACGTGCAAAGCATCATGCTCGTGCAAGAGTGCTTCAAC
GCTCGCCCCGCAGACACCTCCCTTGTCACGTTCCCAAAGTGCGGCACCACCTGGCTAAAGGCCCTCGCGTTCACCATCAC
AAACCGTTTTCGCCACGCCGCCACCAGCGATGACCACCCGCTGCTCACCCACCACCCTCAGGAGTCAAGACCTAGTGCCG
TTTCTCGAGATGCCCTACCGCCAGCTACAGCCTCTTGCTGATCTTGAGAAGCTCGCCTCACCTAGGCTCCTCGCCACCCA
CATGCCGATCACATTGCTACCTCCGTCCGTGTCTAACCTTGGATGCCGTGTTGTGTACCTGTGCCGCAATCCCAAGGACG
TGTTTGTGTCCTTATGGCACTTCACCAACAAGGTAGGCGTGGACTACACCATGCCCATGGATAAAGCATTTGAGTTGTTT
TCTCATGGGCTATCCCCGTATGGGCCTATATGGGAACACAATCTTGGTTTATGGAAGAAAAGCATAGCGGAGAGCGACAA
TGTCCTTTTCTTGAAGTATGACGAGATGATGGCCGAACCAGTCAAGCACGTCAAGATGCTCGCCAAGTTCCTCTGTGTCC
CCTTCACCGAGGAGGAGGTGAGCCGTAGAGTCGTGGGGGATGTCGTGCACCTGTGTAGCTTCGATAAGCTCAAGAGCATG
CCAATCAATTCATCAGGAGCAATTGATCGGATTGGCGGGCTGCCAATGGAGAACTCTGCCTACTTTAGGACCGGAAAGGT
CGGTGACTGGGCAAACCACTTGACGGAAGAGATGGCAAAGAAGCTGGATGCCATTATTGAGGAGAAGCTGAGAGGATCTG
GTCTCATATTTTGACAGCTCGGTGTCATGCTTAACTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTTTGTTAACCTTTTATTTTGTCTCATTTATTCCGTTGCC
TTTTGAGATATGAGCAGAACCTTTGTGATGCCATTGTTGAGGAGAAGTTGAGAGGATCAGATCTCC-ATGTTGACTTATT
G-TTGTTATGCTTAACTATGCATGTGCTTGTGCAACCAAAAATGTGTGTTCTTAATAACAATGTGAAACACTGTATTTTA
ATGTTTTGCTAACCCTT-----TTGTTTTGTTTTATTTTGTTATCATTGACTATTG--TCCTTTCGACATATGAGCAATA
GAGCAAAACTTATATGTAAAAGATGACTGCGTCAATTATTATGAGATTTACAAAAAATGT---------ACTAGTGGTTA
AATTTTAACTTTGAAGATTATGTTGATGG-AACTACTATTGGCGAATCGGAGGGAGTAATTTGAGAATCCTTTTACGCAT
ACCTAACACCATATGGTCCAAAGAAGCTAAGGGGCTGTTTGGTCAGTGCCCTGAGCACCATGCCTGAGAAAATTACGTGC
CTGAGTGTAGCCTGAGATTTTTGTGCTTTTAACCCGACTAGGCAGCTCCGGCCAAGTGTTGTTTGGTTCGTGCCTAGCCT
GAGAAAATAAAGAATGGTATGATGCAATGATTGCTAGTTGCATGCAACATGGGTGAACCATTAAAGTACACTGATCAACC
ATTAAAATATATTTGCGTGTGTGTGCCTGAAGCTCAGCCCTCCGATTTTGGTGGCCTGACTCGGGCTAATTGTGTGCCTG
TGTGCTCAGGTCAGGCTAGCTATAAGAGTGCTCATGCTGCCAACCAAACAAGGTTCAGGCTAGTGTCCGGCTTCCCTCTG
GCCAGGCAGATTTTTCTCAGGGTAGCAACCAAACAGTCCCTAATAGCCTAGCCCACCTGCGACTCATACACTCATTTGTA
GTACCCCACTTTGATGAGTTGGACCAACAAAGCCTATATGTGAATAAAATGGCAGTGACTATTTTTCAATCAACTTAGGA
ATAGTTATTTCTCAATTAGGGTTTATAGTCATTGTGATCCACTATCTCCAATATTATTTAACATTGTCACGGGCATGCTA
GATACTTTGATCGGACACACCAAACAAAACGACCAAACTACAATAGCAGTGCCACATCTTGTAGACTCTCAATAGTACAA
TATGCCCGAGAACACGATTCTGTTTATGTAACATAACCTGAATAAGGATAGCAATCTAAAACTCCTGCTTTTAGCTTTAG
AGCAA----CAGATCTTAAAATTAATATTCACAAAAGTGATTTGTTTTGT------------------------------
--------------------TC--------------------------------------------------CACAAAGC
CAATTCCCATTTAAATATGTGTGAATCCTAATGCATTATCAATTTCTCACTTGTGTAGAGTGGAAACATGTCGAAGAGTG
CTTACAGAAATGTTTGAACAGTTGGAAATGCAAGTTGGCCTCCATTGATGGACAACCGGTGTTGATCAACTATGGTCTCA
TGAAAATGGTTCTCTACATGCTCTCAATGTTTCAACTTTCCAAAGGGGT-CTGCAAAAACTGAATT----CATATGCAGA
TTCTTTTGGCAAGGAAATAGTAAAAAGAAAACATATGGA-CTAACCAAATGAAGTGTGGTTTGTCGACTGGAAGACCAGG
GAGGTCTAGGTATCAATGACTTCCAGGTCGAGAATGACGCCTTACTCGGTAAATGTCTCTTCAAACTACTTACCGACGAT
GGCGTTTGAGAAACTCTACTACACAAGAAGTATCTAGGCCAGAAAGTTGTGTCACAGGCATTCTAGAAGTCTGATGATTC
ACATTTATTGGTTTCAACTAATGGCGACAAAGAAACATATTTTTC-GCTTTGCATCTTTCATGATAAAGGAAGACTCCGA
GATACACTTATGAGAGGACAAATGCCCGGGAAACATCACACTCCGGGAACATCATACAACCTTGTA----
>chr3D_894
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-------------------------------------------------------AAGGC--------------------
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-----------------------TGTTGGCTGAGATCCCACAACGTGCAAAGCGTCATGCTCGTGCAAGAGCGCTTCAAG
GCTCGCCCCGACGACACCTTCCTTGTCACGTTCCCAAAGTGCGGCACCACCTGGCTAAAGGCCCTCGCATTCACGGTCAC
AAACCGTTTCCGCCACGCCGCCACCAGCGAGGACCACCCGCTGCTCACCCAGCACCCTCA-------AGACCTAGTGTCG
TTTCTCGAGATGCCCTACCGCCAGCTACACCCTCTCGCTGATCTTGAGAAGCTCGCCTCACCTAGGCTTCTTGCCACCCA
CATGCCGATCACACTGCTACCTCCGTGTGTGTCTAACCTCGGTTGTCGTGTTGTGTACCTGTGCCGCAATCCCAAGGACG
TGTTCGTGTCCTTATGGCACTTCACCAACAAGGTAGGCGCGGACTACACCACACCCATGGATCAGGCATTTGAGTTGTTT
TCTGACGGGGTATCCCCGTACGGGCCTATCTGGGAACACAATCTTGGGTTCTGGAAGAAATACACGGCGGAGAGCGACAA
TGTTCTTTTCTTGAAGTATGATGATATGATGGCCGAACCGGTCAAGCACGTCAAGATGCTCGCCAAGTTCCTCTGTGCCC
CCTTCACCGAGCAGGAAGTGAGCTACGGAGTCGTGGAGGATGTCGTGCACCTGTGTAGCTTTGATAAGCTCAAGAGCATA
CCAATCAACTCATCGGGAGAAACTGATAGGATTGGTGGGCTGCCAATGGCTAATTCTTCCTACTTTAGGACCGGGAAGGT
TGGTGACTGGGCAAACCATTTGACGGAAGAGATGTCGAAGAAGCTGGATGACATCGT-----------------------
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-------------------------------------TGAGGAGAAGCTGAGAGGGTCAGGTCTCACATTTTGACATTCC
CATTGTCATGCTTAACTATGTGTGTGCTTGTGCAACCAAAA-TGTGTGTTCTCAATAATAATGTGAAAGACTATGTACTT
CTATATTTGCTAA-----------GCTTTTTTTTGTTCTAAATTAATTGACTCTACTGTGCTTTTGAGGTATTGAGAAAT
AAAGAAAACTTATGTGTAAAAGGCAATGACATCAATTGTCATGAGATTTATAAATGTGTAGTAATATGAACTAGTGGTTA
AATTTTAAGTTTAAAGATTATGTTGATGACAACTACTATGGGGGA-----------------------------------
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>chr5D_2644
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-GCAAATGTCGGGTCTGAAAATTAACTTTCATAAAAGTCAATTGTTCTGT------------------------------
--------------------TTCGGAGAATCCAAGGAGGCGGCTGCACAATATGCAGACTTGTTCGGTTGTGCACAAGGC
CAATTCCCGATTAAATGTTTGGGAATTCCGATTCATTATCGGCATCTCACTAATGCGGAGTGGAAACATGTTGAAGAGTG
ATTGGAGAAACGGTTGAGCAGTAAGAAAGGCAAGTTGCTCTCCATTGGAGGGCGACTAGTGTTGATCAATTCTGTTCTCA
TAAACATGATTATCTACATGCTTTCATTTTTCCAAATTCCCAAAGGGGTTCTGCAAAGACTGGATTACTTCAGATCCAGA
TTCTTTTGGCAAGGAGACAGTGAAAATAAAAAAGTACAGGCTAACCAAATGAAGTGTGGTTTGTCGACCAAAAGACCAAG
GAGGTTTAGGTGTTCAAGACCTCTAGGTCAAGAATGACGCCTTGCTCAGCAAATGGCTATTCAAGCTACTTACGGAGGAT
GGTGTTTGTCAAACCCTGTTGCGTAATATGTATCTAGGCTAAAAAGTATTGTCCGAGGCATATTGGAAAACTGGTGGCTC
ACA-TTTTTGGTTTGGTCTGATGGCGGTAAAGAAACATCTATTCCT-CTGTGGATCATTCGTGATAAAGGACGGCTCCGA
GATATGTTTCTAGAAGGACATGTGGCTAGGAAATGCCACTCTTCAAGAACAGTATCCAGCCTTGTACCAC
>SNPs
---------S-------------------------------------S---------------S----------------
----------S---------------------S-----------------------------------------------
-----------------------------------------------------------S------------------S-
--------S---------------------------------------------S-------------------------
----S--S-------------------------S--------------------S----------S--------------
----------------------S------S------------------------------------------------S-
S--S-------------------------------------------------------------S------------S-
--S------------------------S----------------------------------------------------
-------------------S----------------S-------------------------------------------
--------------------S-----------------------------------------------------------
-----------------------------------SS---------------------------S----S------S---
----------S------SS----------------------------S--------------------------------
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------------------------S----S--------------------------------------------------
-----------SS------------------------------S-SS--------------------------S----S-
----------------------SS----------------------------------S---------------------
----------------------------------------S------------S------------------S-------
----S-------------------------------S----------------------------S---------S----
----------------------------------------------------S---------------------------
-----------S-------------------------------------------------------S--S---------
-----S----------------S-------------------------------S-----------------S-------
--------S----------------S------------------S------S-------------------------S--
-------------S---------------------------------------S-S------------------------
----------S-------------S--------------S---------S-------S---------S--------SS--
------S---------S---S------------S--S---------SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S----S--S-S--SSSSS-S----------
----------------S-------------------------------------------------S-------------
------------S---------S-----S-----------------------------------------S--------S
----------------SSSSSS-----------------------------------S----------------------
---------------S---------S------S----------SSS--SSS--S-------------------------S
-----------------------------S---------S-------S----------S--SS------S----------
------------S---------------S---------------------------------------------------
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------------------------------------------------S--------S-S--------------------
S----------------------S----------------S-----------S---------------------S-----
-------------------SS-----------S------------------------------------S--S-------
SS-S-----------SS-------S---SSSS-S--SSSSSSS---S------------S--S-----------S-----
----SS---------S---SSS------S-----S--S-------------S-----------SS--S-S--------S-
S-----S-------------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------------------------------
-----S---------------SS---------------------------------------S---SS------------
---------------------S--S--------------S------------------------------------S---
-----------------------------------------------S----S-----------------------S---
-------S------------------S-----S-----------------------------------------------
------------S--------------S----------S-------S-------------------------------S-
-----------S---S-----S--------------------S------------SSS-----------S----------
-S--------------S---S----S------------S-----S----------------SS-----------------
-------S----------------S---------------------------------------------
>forward_48
----------------------------AGAGGTATGAGGCTGGAGCA--------------------------------
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>reverse_4553
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------------------------------------------------------------------------ACCACCCA
CATGTCGATCAC--------------------------------------------------------------------
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>forward_559
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-----------------------------------------------------------CACTCCCGATGCCTTTGCTA-
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>reverse_6601
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----------------------------------------GGGAGTAGTGCCACATCTCG--------------------
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----------------------------------------------------------------------
