>input_sequence_53284
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-------------------------------------------------------ATGTCCGACCACCACCTCGCCGGCG
AGCACCACTCCTCCCCGGCGAGCACCGCCACCACGGCCCTCGGAACCCTGCTGCTCCTGCCGTCGGAGCTCCTCCACGAG
ATCCTCATCCGCCTCGCGCTCCCGGAGCTGCTCCGCGTCCGCTCCGTCGCCCGTCCCCTGTCCCACCTCATCTCCTCCCC
GGACTTCCGCCGCTTCTACCACCTGTCCTCCGTCTCGTCCGGCCCCGCCCCGGCCGCCGCGTGGCTCCTCGTGTTCAAGA
AGCTCCCGCCCCGCGGCGCCGCGCTACGGGGCTTCCACGGGCCGTCCGGCCGCTGGTTCCGCATCCCCGTCGCGGACATC
ATCTCCCCCGCCGTGCCCCCGGGAGAGGACCTCTACTTCCTTGCCGCCTCCGGCAGCTCCTTCCTGTTCGCCGCCAACGG
CCGCCGCGAGCTCGTGGTAGTTGACCTCTCGGCCCAGTCCGCCCGCCGGCTCCCGCCGTCCCCGCTCGGCCCCCGCGGCA
CCTCGTCCTGGCGTCGCTTCGGCCTCAAGCTCGTGGCCGATCCCCCCGGATCAAGCCAGTTTAGGTACACGTCCTTTTCT
TTC---GGAGGACTCTGGAAATCCTCTTTTATTTTCTTTGT------AAAAGGCAGCACTAACCTTGACG----------
-------------------------------------------------------------ATGACGATACGTTTCATCT
TTCTTTCTT----TTTTTTTTCTCTCCCAAGGTTTCTCTTCGCCGAGATGGTGAACAACACGCCCGTTCTCTTCGAGTAC
CAGTCTGACACCGACGCGTGGCAATCATCGGAGGCGGTGCTGGCAAATGGTCCCGCCGCACCGGCAGGCCCCGACGGGGA
CGGCACGTACCTGTGCGCTGCCCACGCCGGGCCGGACTGCGTGATGGTGTACTCAGGACCGGGCGTGGACAGACCGGTCT
TCTTCCGCCCGCGGTTCCCGCACAACCCGAACGCCGGCGGCCACGGCGATCGGCTCCACGTGTACGGCGACGGCAGCGCC
GTGGTGGTCCGATCAACGGTGGTCGACGAACCGAGCCGGACTCGGGTGAAGTTGGTGGCGGGCGTGGACCTGTACGGGCT
CGGGCCGGAGGTGGGAGGCGACTGGCAGCTGGTGTCCACGGTGCCGGGCGAGCTGATCGAAGGGTTCAGGAAGCCGTACG
CCGTGATGACGGGGCTGCTGGCGGAGAGGGAGGGCGTCTTGAGGCTGGTGCTCATCTCCAACTGCAGGGGCGCGTGGGAC
CTGGTGTGGCTGTCGTACGACCGCGCGCGCGGCGAGTGGAGGTGGGTGCCGGTGCCGGACTGGGGCGGCGCCAAGGGCCT
CAACATGGCCGGCATCGCCGTGTCGTCCACCTTCTCTCGTCTCTGGCCGCCGGCGCCTACCATCTGCCGCTGA-------
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>chr3B_1_TraesCS3B01G262500
TGTCCTTGCCGAGCAGCCCGATGCACCAGGCACCTCTTGCACCCTCACCCTTCTCCCCTAGCAAGCTCTGTCGCTGCCGG
GACCGCGGACACCATCGATGCCCTGGAGGTGGTTGGTGACAAGGCCCTCGCTCCAACCGTGCAACAACAACGCCTGGCCC
AGCACTCGAATAGAAGGACGTCGAGGGCAGCAGCGCGGTGTTGCACTTCTTCCTCGCCTACGGCGACGTGCAATTGTCCA
TCATGGCTTACAAGGCGTGACAGAGGTATTGAGGTCATGCACGTGCGCGGTCGCCGTCACGCTCCGGCAACTCAACAGGC
TCTTCAGTTGCTCCCACGATGATGCCAAACGCCCACAGA-CCACGACTTGGAGCCGTTGCGGCGATGTCGCCCGTGGTGA
TCCTTGGACGCAGCGAGCCTGGCCTTGGCGCCGGCGATGGGCGCGGCCGGAGCGGGGCTTTTCTAAGGCATTCCGGCGAT
CGGGCCGGAGCAGTTAGTGAAGTAATGCGTCCCCGTGAGTAGGCCCGAAGCAACTAATGAAGTAATCAAATCAATTAACA
TTTATCGTCAGTG----TTTTTTTGCCCATGTCAA--TTTTCCGGTGCGGTGATTTTTATGACGAAATGTAACGTGATGG
TTTGCTGCTAATGACATTGTGGTGGTCTTTTGCATTTCACTGCATAGACTCACTAACGAGGCATGCATCACATTGGACAC
-GAACCATTTTAGTGGGATCACGCACCGCCCGGAGAGCAGAGAACACAAAATAATTCCTTTTT-TCAT----GTAAAATA
AAGTTAGCCGAGCCCTACAAAACATCTCTCTTTCATCCTCGTCCACAAGAAAGAAATCCAAAACCCGATGAACTAGAGAT
TTATCGCACCAGGTCAAACAACCGAAAAACCGTCTCGCCAGCCCTGTATAAAGAGCAAGACCCGGCAAACTTGTCTCCCA
AACCAACAATCC--ATCCCCATCCCCAAGAAATTAAACCTCAACAAACCCCTCCCATGTCCGACCACCACCTCGCCGGCG
AGCACCACTCCTCCCCGGCGAGCACCGCCACCACGGCCCTCGGAACCCTGCTGCTCCTGCCGTCGGAGCTCCTCCACGAG
ATCCTCATCCGCCTCGCGCTCCCGGAGCTGCTCCGCGTCCGCTCCGTCGCCCGTCCCCTGTCCCACCTCATCTCCTCCCC
GGACTTCCGCCGCTTCTACCACCTGTCCTCCGTCTCGTCCGGCCCCGCCCCGGCCGCCGCGTGGCTCCTCGTGTTCAAGA
AGCTCCCGCCCCGCGGCGCCGCGCTACGGGGCTTCCACGGGCCGTCCGGCCGCTGGTTCCGCATCCCCGTCGCGGACATC
ATCTCCCCCGCCGTGCCCCCGGGAGAGGACCTCTACTTCCTTGCCGCCTCCGGCAGCTCCTTCCTGTTCGCCGCCAACGG
CCGCCGCGAGCTCGTGGTAGTTGACCTCTCGGCCCAGTCCGCCCGCCGGCTCCCGCCGTCCCCGCTCGGCCCCCGCGGCA
CCTCGTCCTGGCGTCGCTTCGGCCTCAAGCTCGTGGCCGATCCCCCCGGATCAAGCCAGTTTAGGTACACGTCCTTTTCT
TTC---GGAGGACTCTGGAAATCCTCTTTTATTTTCTTTGT------AAAAGGCAGCACTAACCTTGACG----------
-------------------------------------------------------------ATGACGATACGTTTCATCT
TTCTTTCTT----TTTTTTTTCTCTCCCAAGGTTTCTCTTCGCCGAGATGGTGAACAACACGCCCGTTCTCTTCGAGTAC
CAGTCTGACACCGACGCGTGGCAATCATCGGAGGCGGTGCTGGCAAATGGTCCCGCCGCACCGGCAGGCCCCGACGGGGA
CGGCACGTACCTGTGCGCTGCCCACGCCGGGCCGGACTGCGTGATGGTGTACTCAGGACCGGGCGTGGACAGACCGGTCT
TCTTCCGCCCGCGGTTCCCGCACAACCCGAACGCCGGCGGCCACGGCGATCGGCTCCACGTGTACGGCGACGGCAGCGCC
GTGGTGGTCCGATCAACGGTGGTCGACGAACCGAGCCGGACTCGGGTGAAGTTGGTGGCGGGCGTGGACCTGTACGGGCT
CGGGCCGGAGGTGGGAGGCGACTGGCAGCTGGTGTCCACGGTGCCGGGCGAGCTGATCGAAGGGTTCAGGAAGCCGTACG
CCGTGATGACGGGGCTGCTGGCGGAGAGGGAGGGCGTCTTGAGGCTGGTGCTCATCTCCAACTGCAGGGGCGCGTGGGAC
CTGGTGTGGCTGTCGTACGACCGCGCGCGCGGCGAGTGGAGGTGGGTGCCGGTGCCGGACTGGGGCGGCGCCAAGGGCCT
CAACATGGCCGGCATCGCCGTGTCGTCCACCTTCTCTCGTCTCTGGCCGCCGGCGCCTACCATCTGCCGCTGAACCGAA-
--------CCGTACGTGTTGCTTGTGTCTGTACGTACCGTGGGCAAGGTAGCGTGTGGGATTATTGTTCATGGGAGAGGT
GTTTGGCCAGACGTGGCAACAAAGGCCCCCACGATCATCCGAGTGGTACCTCCTCTGTTCTCCCCTCCATGCCGCTGGGG
CCGTCGCATAGTGCGACATGATCCTGTGTGATAGCTTGGTCGATGCGGACAAGTGATGGCGTGAGTGTG---TTAGATAA
GGAGTGGTGTGTCCGTGTTCATAAATCTGGTATGTGCCTTCCTGAGAAAAAATTAAATACGGTATGTACCTAGAAAATCG
TGTATCTCTTCGTGTTCACGTCCGGGAGCCAAGACAGAACCGCAGTGGTGTGCCATGCTATCAGTTACTGTCTACTAAGG
GCATCTCAAATGACGATCCACAAATTTTATCCCCCATCCGGCCGTGAAT------------------------AGAGGAC
CAGTCTGCGGATACGGATGCGGGAGGGCGTCATTCAATATTGCTTGCATACATTTTAA-----TTATAAACCAACTAGAC
GAAGTTCGTGCAAACACGATAGATTTCATATAAACCGAACGCCATTCATGTAAGGGATTAGAACACAACAGATTTTCATT
ACATTTCAAACAATTAGAACAAAAAATAAATCCAGCGGCTGCCGGTGTCAAAGCCCTTGTTGTTCCCTTCCTTGGACTGT
CTCCTCCATCCGCGCGTCTTCATGAGCACCGGCGATAAGATCGATAAAGTGAAACTGCGATCTCCGGCAAGAAAGATAGA
ACACGGGAGACGGACTGGCCTACATGGGACACAAGATCTTGCTGCCTCCCGTGCCCTACTCATCCTCGGAGGAGTCGCCG
CCTTGTCCGTCACTGATGGACGTCAGGTCCACGATGGAAATGGTGGCGCTCGCGCTGTCATCGTCCCACCGGGCCGCCTG
ATAGTTCGTCTACAGCA--TAGGAGGCGGCGTTGTTCTCCTTCGTGATCCCCTGGAGGCACGGCGGCCGCTTCTTG
>chr3D_1
TGTCCTTGCCGAGCAGCCCAATGCACCAAGCACCTCTTGCACCCTCACCCTTCTCCCCTAGCAAGCTCTCTCACTGCCGC
GACCGCGGACACCATCAACGCCCTGGAGGTGGTTGGTAACAAGGCCCTCGCTCCAACCGTGCAACAACAGCGCCCGCCCC
AGCACTCGAATAGAAGGACGTCGAGGACAGCAGGGCGGTGTTGTACTTCTTCCTCACGTGCAGCGACGTGCAATTGTCCA
TCATGGCTTACAAGGTGTGGCGGGGGTATTGGGGTCATGCACGTGCGCGGTCGCCGTCGCGCTCCGGCAGCTCAACAGGC
TCTTCAGTTGCTCCCA-GATGATGCCAGACGCCCAG-GGGCCACGACTTGGAGCCGGTGCGGCGATGTCGTGCGTGGTGG
TCCTTGGACACAGCGAGCTTGGCCTTGGCGCCGATGATGGCCGCGGCCGGAGCGGGGCTTTTCTTAGGCGTCCCGACGAT
CGGGCCAGAGCAATTAGTGAAGTAATGCGTCCTTGCGAGTAGGCCTGTAGCAATTGGTGAAGTAATCAAACCGATTAGCA
TTCATCATTGGTG----TTTTCTTTATCACGGTCAATTTTTCTGGTGCGGTGATTTTTACGATGAAATGTAATGTAGTGG
TTTGCTGCTAATGACATTGTGGTGGTTTTTTGCATACT----------CTCACTAACGACACATGCATCACATTCCGAGA
TGAACCATTTTAGTGGGATCACGCACCGTCCGGAGAGCAGAGAACACAAGAGAATTCCTTTTTCTCGT----GTAGAATA
AAGTGAGCTGAGCCCTATAAAACATCACTCTTTCATCCCTGTCCACAAGAAAGAAATCCAGAACCCGATGAAGTAGAGAT
TTAGCGCACCAGGTCAAACAACCGAAAAACCGTCTCGCCAGCCCTGTATAAAGAGCAAGACCCGGCAAACTTGTCTCCCA
AACCAACAATCCCGATCCCCATCCCCAAGAAATTAAACCTCAACAAACCCCTCCCATGTCCGACCACCACCTCGCCGGCG
ACCACCACTCCTCCGCGGCGAGCACCGCCACCACGGCCCTCGGGACCCTGCTGCTCCTGCCGTCGGAGCTCCTCCACGAG
ATCCTCATCCGCCTCGCGCTCCCGGAGCTGCTCCGCGTCCGCTCCGTCGCCCGTCCCCTGTCCCACCTCATCTCCTCCCC
GGACTTCCGCCGCTTCTACCACCTGTCCTCCGTCTCGTCCGGCCCCGCCCCGGCCGCCGCGTGGCTCCTCGTGTTCAAGA
AGCTCCCGCCCCGCGGCGCCGCGCTACGGGGCTTCCACGGGCCGTCCGGCCGCTGGTTCCGCATCCCCGTCTCGGACATC
ATCTCCCCCGCCGTGCCCCCGGGAGAGGACCTCTACTTCCTCGCCGCCTCCGGCAGCTCCTTCCTGTTCGCCGCCAACGG
CCGCCGCGAGCTCGTGGTGGTTGACCTCTCGGCCCAGTCGGCCCGCCGGCTCCCGCCGTCCCCGCTCGGCCCCCGCGGCA
CCTCGTCCTGGCGTCGCTTCGGCCTCAAGCTCGTGGCCGATCCCCCCGGATCAAGCCAGTTTAGGTACACGTCCTTTTCT
TTCGGTGGAGGACTCTGGAAATCCTCTTTTATTTTCTTTGT------AAAAAACAGCACTAACCTTGACG----------
-------------------------------------------------------------ATGATGATACGTTTCAACT
TTCTTTTTTTTTCCTCTCCAA------CAAGGTTTCTCTTCGCCGAGATGGTGAACAACACGCCCGTTCTCTTCGAGTAC
CAGTCTGACACCGACGCGTGGCAGTCATCGGAGGCGGTGCTGGCAAATGGTCCCGCCGCACCGGCAGGTCCCGACGGGGA
CGGCACGTACCTGTGCGCTGCCCACGCCGGGCCGGACTGCGTGATGGTGTACTCAGGCCCGGGCGTCGACAGACCGGTCT
TCTTTCGGCCGGGGTTCCCGCACAACCCGAACGCCGGCGGCCACGGTGATCGGCTCCACGTGTACGGCGACGGCAGCGCC
GTGGTGGTCCGATCAACGGTGATCGATGAGCCGAGCCGGACTCGGGTGAAGTTGGTGGCGGGTGTGGACCTGTATGGGCT
CGGGCCGGAGGTCGGGGGTGACTGGCAGCTGGTGTCCACGGTGCCGGGCGAGCTCATCGAAGGGTTCAGGAAGCCGTACG
CCGTGATGACGGGGCTGCTGGCGGAGAGGGAGGGCGTCTTGAGGCTGGTGCTCATCTCCAACTGCAGGGGCGCGTGGGAC
CTCGTGTGGCTGTCGTACGACCGCGCGCGCGGCGAGTGGAGGTGGGTGCCCGTGCCGGACTGGGGCGGCGCCAAGGGCCT
CAACATGGCCGGCATCGCCGTGTCGTCCACCTTCTCGCGTCTCTGGCCGCCGGCGCCAACCATCTGCCGCTGAACCGGAC
CGTCTCGGCCGTACGTGTTGCTTGTGTCTGTACGTACAGTGGGCAAGGTAGCGTGTGGGATTATTGTTCATGGGAGAGGT
GTTTGGCCAGGCGTGGCAACAAAGGCCCCCACGATCATCCGAGTGGTACCTTCTCTGTTCTCCCCTCCATGCCGCTGGGG
CCGTCG---------ACATGATCCTGTGTGATAGCTTGGTTGATGCGGACAAGTGATGGCGTGAGTGTG---TTAGATAA
GGAGTGGTGTGTCCGTGTTCATAAATCTGGTATGTGCCTTCCTAAGAAAAA---AAATACGGTATGTACCTAGAAAATCG
TGTATCT-TTCGTGTTCACGTCCGGGGGCCAAGAGAGAAC---------GTGCTATGCTATCAGTTACTGTCTACTAAGG
GCATCTCTAATGACGACCCATAAATTTTATCCCGCATCCGGCCGTGAACAGAGTCCCGCATCCGGCCGTGAACAGAGGAT
CAATCCGCGGACACGGATGTGGAAGGGCGTC-TTTCATGCTGCTTCCATACATGTCAACAATTTTATAAACCAACCGGAC
GAAGTTCGTGCAAACACGGCGGATTTTATATAAACCGAACGCTATTCATGTAA---------ACACAGTAGATTTTCATT
ACATTTCAAACAAAAGA----------AATTCCAGCAGCTGCCGGCGTCCAAGCCCTTGTTGTTCCCTTCCTTGGACTGC
CTCCTCTATCCGA-CGTCTCTATGAGCACCGGCGATAAGACCGATGAAGTGAAGTTGCGGTCTCCGGCAAGGAAGATAGA
ACACGGGAGACGGACCAGCCCACATGGGACACAAGGTCTTGCTGCCTCTCGTGCCCTACTCATTCTCGGAGGAGTCCCCG
CCTTGTCCGTCACTGATGGACGTCAGGTCCACGATGGAAATGGTGGCGCTTGCGCTGTCGTCGTCCCACCAGGCCGCCTG
ATAGTTCGTCGACGGTGCGTAGGAGGCGGCGTTGTTCTCCTTCGCGGTCGCCTGGAGGCGCGGCGGCTGCTTCTTG
>chr3A_1
TGTCCTTGCCGAGCAGCCCAATGCACCAGGCACCTCTTGCACCCTCACCCTTCTCCCCTAGCAAGCTCTCTCACTGCCGC
GACCGCGGACACCATCAACGCCCTGGAGGTG------AACAAGGCCCTCGCTCCAACCGTGCAACAACAGCGCTCGCCCC
AGCACTCGAATAGAAGGACGTCGAGGACGGTAGGGCGGTGTTGTACTTCTTCCTCACGTGCAGCGACGTGCAATTGTCCA
TCATGGCTTACAAGGTGAGGCAGGGGTATTTGGGTTATGCACGTGCGCGGTCGCCGTCGCGCTCCGGTAGCTCAACAGGC
TCTTTGGTTACTCCCA-GATGATGCCAGACGCCCAG-GA-CCACGACTTGGAGCCGTTGCGGCGATGTCGTCTGTGATGG
TCCTTGGACGCAGCGAGCCTGGCCTTCGCGCCGGTGATGGACGCGGCCGGAGCGGGGCTTTTCCTAGGCGT---GGCGAT
CGGGTCGGGGCAATTAGTGAAGTAATGCGTCCCCGCCTACACTTGG--AGCAATTAGTAAAGTAATCAAACCAATTAGCA
CTTATCATCGGTGTTTCTTTTTTTGTCACTGCCAA--TTTTCTGGTGCGATGATTTTTACAACAAAATGTAATGTGTTGG
TTTGCTGCTAATGACATTGTGGTGTTTTTTTGCATTTCATTGCAGACT-------------------TCACATTCGACAC
-AAACAATTTTAGTGGGATCACGCACCGCCCGGAGAGCAGAGAACAGAAAAGAATTCCTTTTTTTCATGTACGTAGAATA
AAGTGAGCGGAGCCCTATAAAACATCTCTCCTTCATCCCTGTCCACAAGAAAGAAATCCAAAACCCGATGAACTAGAGAT
TTAGCGCACCAGGTCAAACAACCGAAAAACCGTCTCGCCAGCCCTGTATAAAGAGCAAGACCCGGCAAACTTGTCTCCCA
AACCAACAATCCCGATCCCCATCCCCAAGAAATTAAACCTCAACAAACCCCTCCCATGTCCGACCACCACCTCGCCGGCG
ACCACCACTCCTCCCCGGCGAGCACCGCCACCACGGCCCTCGGGACCCTGCTGCTCCTGCCGTCGGAGCTCCTCCACGAG
ATCCTCATCCGCCTCGCGCTCCCGGAGCTGCTCCGCGTCCGCTCCGTCGCCCGTCCCCTGTCCCACCTCATCTCCTCCCC
GGACTTCCGCCGCTTCTACCACCTGTCCTCCGTCTCGTCCGGCCCCGCCCCGGCCGCCGCGTGGCTCCTCGTGTTCAAGA
AGCTCCCGCCCCGCGGCGCCGCGCTACGGGGCTTCCACGGGCCGTCCGGCCGCTGGTTCCGCATCCCCGTCTCGGACATC
ATCTCCCCCGCCGTGCCGCCGGGAGAGGACCTCTACTTCCTCGCCGCATCCGGCAGCTCCTTCCTGTTCGCCGCCAACGG
CCGCCGCGAGCTCGTGGTGGTTGACCTCTCGGCCCAGTCGGCCCGGCGCCTCCCGCCGTCCCCGCTCGGCCCCCGCGGCA
CCTCGTCCTGGCGTCGCTTCGGCCTCAAGCTCGTGGCCGATCCCCCCGGATCAAGCCAGTTTAGGTACACGTCCTTTTCT
TTCGG---AGGACTCTGGAAATCCTCTTTTCTTTTCTTTTCTCTGTAAAAAAACAGCACTAACCTTGACGCTCTTCGTAT
TACATTTCACAGCGGTTATTATTCATCTGATTGTTTTGTAGATGTAGTACGATTTAATCTGATGATGATACGTCTCATCT
TTTTTTTTT----CTCTTCAA------CAAGGTTTCTCTTCGCCGAGATGGTGAACAACACGCCCGTTCTCTTCGAGTAT
CAGTCTGACACCGACGCTTGGCAGTCATCGGAGGCGGTGCTGGCAAATGGTCCCGCCGCACCGGCAGGTCCCGACGGGGA
CGGCACGTACCTGTGCGCTGCCCACGCCGGGCCGGACTGCGTGATGGTGTACTCAGGCCCGGGCGTGGACAGGCCGGTCT
TCTTCCGCCCGCGGTTCCCGCACAACCCGAACGCCGGCGGCCACGGCGATCGGCTCCACGTGTACGGCGACGGCAGCACC
GTGGTGGTCCGATCAACGGTGATCGACGAGCCGAGCCGGACTCGGGTGAAGTTGGTGGCCGGTGTGGACCTCTACGGGCT
TGGGCCGGAGGTGGGAGGCGACTGGCAGCTGGTGTCCACGGTGCCGGGCGAGCTGATCGAAGGGTTCAGGAAGCCGTACG
CCGTGATGACGGGGCTGCTGGCGGAGAGGGAGGGCGTCATGAGGCTGGTGCTCATCTCCAACTGCAGGGGCGCGTGGGAC
CTGGTGTGGCTGTCGTACGACCGCGCGCGCGGCGAGTGGAGATGGGTGCCGGTGCCGGACTGGGGCGGCGCCAAGGGCCT
CAACATGGCCGGCATCGCCGTGTCGTCTACCTTCTCGCGCCTCTGGCCGCCGGCGCCAACCATCTGCCGCTGAACCGAAC
C------GCCGTACGTGTTGCTTGTGTCTGTACGTACAGTGGGCAAGGTAGCGTGTGGGATTATTGTTCATGGGAGAGGT
GTTTGGCCAGACGTGGCAACAAAGGCCCCCACGATCATCCGAGTGGTACCTCCTCTGTTCTCCCCTCCATGCCGCTGGGG
CCGTCG---------AATAG-------GTGATGGCTTGGTCGACGCGGACAGGTGATGGCGTGAGTGTGGTTTTAGATAA
GGAGTGGTGTGTCCCTGT--------------------------------------------------------------
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>SNPs
-------------------S-------------------------------------------------S--S------S
----------------S-S------------------S-------------------------------S----S-S---
--------------------------S------S---------S-----------S-S-S-S------------------
---------------S---S---S-------S--------------------------S----------S----------
----------------S----------S-------SS---------------------------------S--------S
----------------------------------S-----S-----------------------S----S-S--------
------------S----------------------S---------S-S-----S--S-------------S------S--
------S--S---------------S-----S----------S----------------S------------S---S---
--------------------------S------------S----S-SS-----------SS-------------S-----
---------------------------------------------------S-----------------------S----
----S---S--------S--------------------SS----------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----------------------------------------S------------------------------------
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-----------------------------------------------------------------------S--------
-----------------------------------------S--------------------------------------
------------------S--------------------S----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS---------------------------
-----------------------------------------------------------------S--------------
------S------S-S--SSSSSSSSS-----------------------------------------------------
-----------------------S--------------------------------------------S-----------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
---------------------S-------S--------------------------------S-----------------
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------------------------------------S--------------------S----------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
------SSSSSSSSS-----------------------------------------------------------------
-------------------------------------------S-------SSS--------------------------
-------S------------------S-------S-----SSSSSSSSS----S--------------------------
-------S--------S---S------------S--------------S------------------------------S
--S--S-----S-------S--S--------S--SS--SS-----S-------S-S-------------------SS---
------------------SSS-----S---------------S----------SSSSSSSSS-----SS-----------
-------------SSSSSSSSSSSSSS--S------S--------S---S-----------------------------S
------S-----SS-----SS-------------------S----S-------SS----S-----------S--------
---------------SS---S--------------S------------S--------------S------------S---
--------------------------------------------------S--------S----------S---------
----------S--S-SS---------------------------S-S--S---------S-------S--------
>forward_264
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----GGCTTACAAGGCGTGACAGA--------------------------------------------------------
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>reverse_1785
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------------------------TCCCAAGGTTTCTCTTCGCC------------------------------------
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>forward_516
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----------------GTGAAGTAATGCGTCCCCGT--------------------------------------------
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>reverse_1787
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--------------------------CCAAGGTTTCTCTTCGCCGA----------------------------------
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>forward_715
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-------------------------------------------------------ACGAGGCATGCATCACATTG-----
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>reverse_2652
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-----------TGCGACATGATCCTGTGTGA-------------------------------------------------
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