>input_sequence_53271
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--------------------------------------------------------------------------ATGGCC
GACGCCGGAGCTCGCCTCCCGCTGCTGCTCCTCCTCGCCGCCGCGGGGGCCCTCCTCCTCGCCTCCCCCGCCGCGGCGGA
GATCCGGGCGGAGTCCTTCCGGGAGGACCCGCGCCACACCATCCTGTTCGAGAAGTTCGGCTTCTCCAAGACCGGCGCGG
TCCGCATCATCCTCTCCGGCGCCGCCGTCTCCTCCTCCTTCGCGCGGGCGGACCCCAAGCAGATCGGGTTCTTCCTCCTC
GCCGACGAGTCCCTCCTGCAGGCCGCCTCCGAGTCGCGGCCGCCACCGGAGAAGCGCGCGGAGCCGGACGACCCGACCGG
CGCCGACGAGCCCGACCTGTCCGGGTGCGTCCTCTCCAGCCCCTACGTCAAGAAGCTCTTCACCTTCTTTGACATGGAGG
---GCGGGCACTACAACAAGTCCTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCCAACTGCGCGCCGGAG
TCGCTCGTCTCCATGAACGTCCGCACCGAGATGTACAACGCCAACCCGGACGGCTCCAAGGACTACCTCCCCGTCGGCCA
GGCGCCCGTCCCGGCCATCTACGGCTTCTTCGCCTTCGGCTACGCCGCGTTCCTCGCCGGGTGGGCCTACCTCACGCTCT
CCCGCGACCGCGTGGCGGCCAACCAAATCCACCACCTCATGTCCGCGCTCCTCGTGGCGCGCCTGCTCTACTGCCTCTCC
GCCGCCGAGGACCAGCACTACGTCCGCGTCACCGGCACGCCACACGGCTGGGACGTGGCCTTCTACCTCTTCCAGCTCAT
CAAGGGCGTCATCCTCTTCGCGGTCATCGTGCTGGTCGGCACGGGCTGGTCCTTCCTGAGGCCCTTCCTGCAGGACCGGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCCGACGCGGTCATCGGGGAGACCGGGCCG
TTCATGCAGAGCTGGGTGACATGGAACCAGATCCTGCTCTTCGTCGACGTCGCCTGCTGCTGCGCCGTGCTCTTCCCGGT
CGTCTGGTCCATGCGGTCGCTCCGGGAGACGTCCAAGACCGACGGCAAGGCGGCGCGGAACCTGTCCAAGCTCACTCTGT
TCCGGCAGTTCTACACCGTGGTGATTGGGTACCTGTACTTCACCAGGATCGTGGTGTTTGCGCTGAGGACCATTGCCAGT
TACCAGTACCGGTGGGTGAGCATCCTGGCCGAGGAAGTGGCATCAATGGCGTTCTACATGTACATGTTCTACACATTCAG
GCCGGCCGAGAGGAGCAAGTACTTCTCTCTCGACGACGACGACGAGGAGGCCGCGGAGATGGTGCTCCGGGAAGAGGAAT
TCGAGCTCTGA---------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G287500
TCTCCCCCTCTCGTTGCTATGCATCTTCTAGATAGATCTTGCGTGAGCGTAGGAAATTTTTAAAATTGCATGCTACGTTC
CCTAACAGAATTAGCAAAATCAAGGCACTCAGATTACTCTTTGTCCACCAAGGACATGATAAAGGTATATTCATGCTCAC
ACGAAACTACGAGGGAAATGTACCTTATCCCTGCAAAGAACCAAAGACCAAAGCACCAATAGCCAACCACGCAATCAAGC
CAAACAAACACTTTAGATAACCTGTTTTCACTTTCACACTGATA------------------------------------
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---AAAAAAGGAAGTGACATGGCAGCGCACGGTACTTTTAGCATAGATGAAGCGAGGGTTATTTTTCGTTAGTCTCGCCG
ACTTACTTCAAAACCTCTCTGAAACTAGGTACAAACCTTAAAACCACCCAATTGTATCGAATCAGAGCCACGTGAGAGAG
TATGGGTAGGCGAGAGAGGGTTTCTTAAACTAATGATTTATACTACCTCCATTTTGTTTATTAGTCCCTCTTATATTTTA
GATCAAACTTTAACCTTTAACTTAACTACC-AAAAAATAAGTTGTATGCTACAAAAGTAGTACCATCGAAAACCACATTC
AAATATGAATACAACAAAATAACTATTATGACATACTATTTTATTTCATTGTCAAATCTGTGGTCAAAATTTGTTATAAA
ATATGAAGAGCACCAGTAATCCCAGACGAAGA--------------------------TAGTACTACAAAAGTAGGTAGA
TGTAAAAAGAAATGACACTT------------------------------------------------------------
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--------------------------------------------------------------------AGCCGTTCAGTC
CTCATCGGTGTGACCCCGAAGTGTACAAAAAACTTTCCCATCGCACCGTCGGCTACGACCTACGACTGCCCAAGTCAACC
TCCTACCGAACTCTCACCAATCGCGAGGCACATCCAACCCCCGCCCTTCCGCCACATAAGACGGCCGTGCTCCGCTGCCC
CGCTCCACCCACCGCCCACGCGCACACCGACACACTCCCACGCATTCCGCCCCCCACAGGCCACAGATCTCGCCATGGCC
GACGCCGGAGCTCGCCTCCCGCTGCTGCTCCTCCTCGCCGCCGCGGGGGCCCTCCTCCTCGCCTCCCCCGCCGCGGCGGA
GATCCGGGCGGAGTCCTTCCGGGAGGACCCGCGCCACACCATCCTGTTCGAGAAGTTCGGCTTCTCCAAGACCGGCGCGG
TCCGCATCATCCTCTCCGGCGCCGCCGTCTCCTCCTCCTTCGCGCGGGCGGACCCCAAGCAGATCGGGTTCTTCCTCCTC
GCCGACGAGTCCCTCCTGCAGGCCGCCTCCGAGTCGCGGCCGCCACCGGAGAAGCGCGCGGAGCCGGACGACCCGACCGG
CGCCGACGAGCCCGACCTGTCCGGGTGCGTCCTCTCCAGCCCCTACGTCAAGAAGCTCTTCACCTTCTTTGACATGGAGG
---GCGGGCACTACAACAAGTCCTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCCAACTGCGCGCCGGAG
TCGCTCGTCTCCATGAACGTCCGCACCGAGATGTACAACGCCAACCCGGACGGCTCCAAGGACTACCTCCCCGTCGGCCA
GGCGCCCGTCCCGGCCATCTACGGCTTCTTCGCCTTCGGCTACGCCGCGTTCCTCGCCGGGTGGGCCTACCTCACGCTCT
CCCGCGACCGCGTGGCGGCCAACCAAATCCACCACCTCATGTCCGCGCTCCTCGTGGCGCGCCTGCTCTACTGCCTCTCC
GCCGCCGAGGACCAGCACTACGTCCGCGTCACCGGCACGCCACACGGCTGGGACGTGGCCTTCTACCTCTTCCAGCTCAT
CAAGGGCGTCATCCTCTTCGCGGTCATCGTGCTGGTCGGCACGGGCTGGTCCTTCCTGAGGCCCTTCCTGCAGGACCGGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCCGACGCGGTCATCGGGGAGACCGGGCCG
TTCATGCAGAGCTGGGTGACATGGAACCAGATCCTGCTCTTCGTCGACGTCGCCTGCTGCTGCGCCGTGCTCTTCCCGGT
CGTCTGGTCCATGCGGTCGCTCCGGGAGACGTCCAAGACCGACGGCAAGGCGGCGCGGAACCTGTCCAAGCTCACTCTGT
TCCGGCAGTTCTACACCGTGGTGATTGGGTACCTGTACTTCACCAGGATCGTGGTGTTTGCGCTGAGGACCATTGCCAGT
TACCAGTACCGGTGGGTGAGCATCCTGGCCGAGGAAGTGGCATCAATGGCGTTCTACATGTACATGTTCTACACATTCAG
GCCGGCCGAGAGGAGCAAGTACTTCTCTCTCGACGACGACGACGAGGAGGCCGCGGAGATGGTGCTCCGGGAAGAGGAAT
TCGAGCTCTGAGCATTTGTAATTTTCCGCGACAATGCCGTGAGCTGCAATTTCCA--TGATTGCTCTCTTGGCGCCCTGT
TTATCTGATCTGATCTCCCCTCTTGAGACTTTAGCACACTATTTATACAGATACCAGGTAGCAGGTATAGCTCATCGTCT
TGTATGTACTGCAGGGCTGTATAAGATTATATTTGTTCCTCTTTCCTTGTAGCTTCAAATTTTGCCGATGAGACGCAGGA
TACTAAACTGGATACGTGCAAAGAGGTGCTTGCTTGAAAAGTGCACACGGAATTAATTGAGCAGGTGTTACTGTTCAGGC
AATGTTTGAAATTTGCTGCAA-TTTTGTGTGGTGATCAGTCATTTCATTCTTTGACCATATTGTTGATCCTTTTGTTTGT
CTGTTAACACGACTCGATGTGTTGTCG---TATCTTATGATTTGCCACTCATTGCAACGGAAATCCCACTATTCATTTTA
TGGGATTATCCTTCTTTTCGAAGGAAAAAAC-----TATTTTATTTTCTAATTGGGGAAAATGAAAAAAGAGGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGGAAGGGAAAAGAGGTCTACTTGAAGAGGAAAAGCCAGGTGTCTA
AACTAGCTCCATGAAGAAAGGTCTGTTCAAGGAGAACAGTCCTTTTCCC-------------------------------
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----------------CAGTGCCTTGAAACATCTTCTGGATAGGT-TAATGCTATTTACAGATTTGCATTTCTGAAATGC
CTTCTGATTGGGCATTGTTTGAGATCCTCG
>chr1D_87
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------AGAATTAGCAAAATCAAGGCACTTAGATTACTCTAGGTCCACCAAGGACATGATAAGGTAC-ATTCGTGCTCAC
ACGAAACTACGAGGGAAAAGTACCTTATCCCTGCAAAGAACCAAAGACCACAGCACTAATAGCCAACCAG------AAGC
CAAACAAACACTTTGAATAACGTGTTTTCGTTTTCACACCGATAAGGGCATTTTTGGATCACAGGATTTGCAAAACAAAG
GAATAGGAAAAATGAAGGATTTGGTTGTCATGACATAGCCAATCCTATTGAATTTAAAACCAGAGGAATGGGTAACAAAG
AGCCTTTGGCTACACCATAGGAAACGTACAGGAATCCCATACAATACAATATTGTTATTTTCATGTCTGATGTTTCGAAC
GGCTAATGCAGTCCTGAAGTAGCCGTTAGCAGCAGCCAACAAGTGCATAAATAACCTGCTGCTTGCTTCTTTGTTCTCTG
CAATGCATAGCTCCTTTCCTTGCCCACATTGCTTATATCATTTGTTGTCTGGACTCTATTCTTTCATCTTTCCCTTGCTG
AAGAAACCAACAAGGTTAGTGTTCATCTCCTATTAGCAGAATAATACTTTCATGCTATTCAATCTACCATGATATTTACT
GTTGGGCCCCTGCCATCAACAGTCCTCGCCGGCCAGGCGACCACCAACGCCACACCCGGTGCCTAGTTCCGGCAGGATCT
GCCTCCCCCGCGCCATATCAGGCACCCCCTCCCTCGATCTATAAATAATTGCAAGGGAAGGAGATGGAGGGACTATGTGA
TGCGGGCTAACCAAGATGGGGCTGGTGCTGATCCCGTCGAACTCGACAAGGAAGGGGGGGTCTGAGGGCGAGGTGGTCGG
CGTATCCGACGGTCACCGAGTCGCCGCCACTTCTGTCGGGGGATCTGACCTTGTCGCCTCTTCTTCCGGGAGTCGCGACC
TCGCCGCCACTTTCGGTGCCTTTTTTATTTCCTTCCATAGCGGTGCGAGGTGTTTTTTTAGAGCTCTATGTGGTGTTTTC
ACATGAAGACGCATGGCTTTTTGGCGCGAGCACGCTGCTCGAGCGCTCTCTTTTCGCGCCAGGAATCTTTCGAAGAGGTC
GGGCCTCAGGTGTAAATTCCTCAGGAATTGGCGCCTTCGAAACCCAATCCTGAGGGATTTTGAGAAGGCAATCATGTGAT
CCAAATGCATTCCGTAGGAAACAATCCTGAGGTTCACAATCCTGTGAAAATCCTATAAAGATCCTTCAATCCAAAGAAAG
CCTAAAAAAGGAAGCGGAGTGGCAGCGTGTAGTACTTTTAGCGTAGATGAAGCGGGGGTTGTTTTTCGTTGATCTCGCCG
ACTTACTCCAAAACCTCTGTGAAACGGGGTACAAAACTTAGAACCACCCAGTTGTGTTGAATCAAAGCCATGTGGGAGAG
TATGGGCAGGCGAGAAAGGATTTCTTAAAGTGATGATTCATACTACCTC---------TATTAGTCCCTCTTGCATTTTG
GGTTAAACTTTAACCTTTGACTTAACTATCAAAAAATTAAGTTCTATACCACAAAAATAGTAGCATCGACTTC------C
AAATATGAATCCAACAAAATAACTTTTGGGACATACGATTTTATTTCATTGTCAAATTTGTGGTCAAAATTTGGCATAAA
ATATGAAAGGGGCCAGTAAACTCATACGAAGGCCCAGTCAAAAAAAACCATACGAAGGTAGTACTACAAGAATAGGTGGA
TGTAAAAAGAAACAGTTTTGCTAGAACTCATCTAGATGAGATATAGTTTGGTCTCGTTCATCTTTTATAGCCATTGGATG
TGATGCTATAAGATGCGTGTGCTGACGTGGGTTGTATCTGTTTTTGTTTTCAAGATGAATGAGACCAAATTATATCTCAT
CTAAATGAGTTCTGGGCACTCAAAAAAAATGGCACTTAGTGGATCTCAAATTCTCATAATGCTACACAAGCCGTTCAGTC
GTCCTCAGTGTGACCCCGAAGTGTA-AAAAAACTTTCCCATCGCACCGTCGGCTACGAC-------TGCCCAAGTCAACC
TCCTACCGAACTCTCACCAATCGCGAGGCACATCCAACCCCCGCGCTTCCGCCACATAAGACGGCCGTGCTCCGCTGCCC
CGCTCCACCCACCGCCCACGCGCACACCGACACACTCCCACGCATTCCGCCCCCCACAGGCCACAGATCTCGCCATGGCC
GACGCCGGAGCTCGCCACCTCCTGCTGCTGCTCCTCGCCGCCGCGGGGGTCCTCCTCCTCGCCTCCCCCGCCGCGGCGGA
GATCCGGGCGGAGTCCTTCCGGGAGGACCCGCGCCACACCATCCTGTTCGAGAAGTTCGGCTTCTCCAAGACCGGGGCCG
TCCGCATCATCCTCTCCGGCGCCGCCGTCTCCTCCTCCTTCGCGCGGGCGGACCCCAAGCAGATCGGCTTCTTCCTCCTC
GCCGACGAGTCCCTCCTGCAGGCCGCCTCCGAGTCGCGGCCGCCGGCGGAGAAGCGCGCGGAGCCGGACGACCCAACCGG
CGCCGACGAGCCCGACCTGTCCGGCTGCGTCCTCTCCAGCCCCTACGTCAAGAAGCTCTTCACCTTCCACGACATGGAGG
---GCGGGCACTACAACAAGTCCTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCGAACTGCGCGCCGGAG
TCGCTCGTCTCCATGAACGTCCGCACCGAGATGTACAACGCCAACCCGGACGGCTCCAAGGACTACCTCCCCGTCGGCCA
GGCGCCCGTCCCGGCCATCTACGGCTTCTTCGCCTTCGGCTACGCCGCGTTCCTCGCCGGCTGGGCCTACCTCACGCTCT
CCCGCGACCGCGTGGCGGCCAACCAAATCCACCACCTCATGTCCGCGCTCCTCGTGGCGCGCCTGCTCTACTGCCTCTCG
GCCGCCGAGGACCAGCACTACATCCGCGTCACCGGCACGCCGCACGGCTGGGACGTGGCCTTCTACCTCTTCCAGCTCAT
CAAGGGCGTCATCCTCTTCGCGGTCATCGTGCTGGTCGGCACGGGCTGGTCCTTCCTGAGGCCCTTCCTGCAGGACCGGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCCGACGCGGTCATCGGGGAGACCGGGCCG
TTCATGCAGAGCTGGGTGACATGGAACCAGATCTTGCTGTTCGTCGACGTCGCCTGCTGCTGCGCCGTGCTCTTCCCGGT
CGTCTGGTCCATGCGGTCGCTCCGGGAGACGTCCAAGACCGACGGCAAGGCGGCGCGGAATCTGTCCAAGCTCACTCTGT
TCCGGCAGTTCTACACCGTGGTGATTGGGTACCTGTACTTCACCAGGATCGTGGTGTTTGCGCTCAGGACTATTGCCAGT
TACCAGTACCGGTGGGTGAGCATCCTGGCCGAGGAAGTGGCATCAATGGCGTTCTACATGTACATGTTCTACACATTCAG
GCCGGCCGAGAGGAGCAAGTACTTCTCTCTGGACGACGACGATGAGGAGGCCGCGGAGATGGTGCTCCGGGAAGAGGAAT
TCGAGCTCTGAACATTTGTAATTTTCCGCAACAATGCCGTGAGCTGCAATTGCGCCTTGATTGCTCTCTTGGTAACCTGT
TTATCTGATCTGATCTCCCCTCTTGAGACTTTAGCACACTATTTATACAGATACCAGGTAGCAGGTATAGCTCATCGTCT
TGTATGTACCGCAGGGCTG--TAAGATTATATTTGTTCCTCTTCCCTTGTAGCTTCAAATTTTGCCGATGAGACGCAGGA
TACTAAACTGGATACGTGCAAAGAGGTTCTTGCTTGAAAAGTGCATAGGGAATTAACTGAGCAGGTGTTACTGTTCAGGC
AATGTTTGAAATTTGCTGCATTTTTTGTGTGGTAATCAGTCATTTCATTCTTTGACCAT--TGCTGATCCTTATGTTTGT
CTGTTAACACAACTTGATGTGAT---G---TATCTTATGATTTGCCACTCATTCCAACGGAGATACCATTATTCATTTTA
TGGG-TTGTCCTCCTTTCCGTAGAAAAATATCATTTTATTTTATTTTCTAATTGCATACTACTCCCTCTGTCCCACAATA
TAAGATCGTTTTTCATGCTAGGGAGTACTCCCTCCGTCCTTAAAAGAGTGTACTTCCAACAAGGTCAAACTATCTC----
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----------------AAAGTTCTGATCAAGTTTGTGCAAAAATATGTCAATGCTTGTGAAACCAAATAGGTATATAACG
AAAATATATTTTATGATGAATCTAATGTTTGATGGCATAAATGTTGGTCTATTATTGTATAAATACGGTCAAACATAAAA
AAATTGACCTTACAACAAATTTGGAAGTATCACTCTTTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCAGTCCCTTTTTCAGTGCCCTGAAACATCTTCTGGATAGGTGTAATGCTATTTACAGATTTGCATTTCTGAAATGC
CTTGTGATTGGGCATTGTTTGAGACCCTCG
>chr1B_755
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--------------------------------------------------------------------AGCCGTTCAGTC
CTCCTCAGTGTGACCCCGAAGTGTACAAAAAACTTTCCCATCGCACCGTCGGCTACGAC-------TGCCCAAGTCAACC
TCCTACCGAACTCTCACCAATCGCGAGGCAGATCCAACCCCCGCCCTTCCGCCACATAAGATGGCCGTGCTCCGCTGCCC
CGCTCCACCCACCGCCCACGCGCACACCGACACACTCCCACGCATTCCGCCCCCCACAGGCCACAGATCTCGCCATGGCC
GACGCCGGCGCTCGCCTCCCGCTGCTGCTGCTCCTCGCCGCCGCGGGGGCCCTCCTCCTCGCCTCCCCCGCCGCGGCGGA
GATCCGGGCGGAGTCCTTCCGGGAGGACCCGCGCCACGCCATCCTGTTCGAGAAGTTCGGCTTCTCCAAGACCGGGGCCG
TCCGCATCATCCTCTCCGGCGCCGCCGTCTCCTCCTCCTTCGCGCGGGCGGACCCCAAGCAGATCGGCTTCTTCCTCCTC
GCCGACGAGTCCCTCCTGCAGGCCGCCTCCGAGTCGCGGCCGCCGGCGGAGAAGCGCGCGGAGCCGGACGACCCGACCGG
CGCCGACGAGCCCGACCTGTCCGGGTGCGTCCTCTCCAGCCCCTACGTCAAGAAGCTCTTCACCTTCCACGACATGGAGG
---GCGGGCACTACAACAAGTCCTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCCAACTGCGCGCCGGAG
TCGCTCGTCTCCATGAACGTCCGCACCGAGATGTACAACGCCAACCCGGACGGCTCCAAGGACTACCTCCCCGTCGGCCA
GGCGCCCGTCCCGGCCATCTACGGCTTCTTCGCCTTCGGCTACGCCGCGTTCCTCGCCGGCTGGGCCTACCTCACGCTCT
CCCGCGACCGCGTGGCGGCCAACCAAATCCACCACCTCATGTCCGCGCTCCTCGTGGCGCGCCTGCTCTACTGCCTCTCG
GCCGCCGAGGACCAGCACTACATCCGCGTCACCGGCACGCCGCACGGCTGGGACGTGGCCTTCTACCTCTTCCAGCTCAT
CAAGGGCGTCATCCTCTTCGCGGTCATCGTGCTGGTCGGCACGGGGTGGTCCTTCCTGAGGCCCTTCTTGCAGGACCGGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCCGACGCGGTCATCGGGGAGACCGGGCCG
TTCATGCAGAGCTGGGTGACATGGAACCAGATCTTGCTGTTCGTCGACGTCGCCTGCTGCTGCGCCGTGCTCTTCCCGGT
CGTCTGGTCCATGCGGTCGCTCCGGGAGACGTCCAAGACCGACGGCAAGGCGGCGCGGAATCTGTCCAAGCTCACTCTGT
TCCGGCAGTTCTACACCGTGGTGATTGGGTACTTGTACTTCACCAGGATCGTGGTGTTTGCGCTGAGGACCATTGCCAGT
TACCAGTACCGGTGGGTGAGCGTCTTGGCCGAGGAAGTGGCATCAATGGCGTTCTACATGTACATGTTCTACACATTCAG
GCCGGCCGAGAGGAGCAAGTACTTCTCTCTCGACGACGACGATGAGGAGGCCGCCGAGATGGTGCTCCGGGAAGAGGAAT
TCGAGCTATGAACATTTGTAATTTTCCGCAGCAATGCCGTGAGCGGCAATTGCCA--TGATTGCTCTCTTAGCGCCCTGT
TTATCTGATCTGATCTCCCCTCTTGAGACTTTAGCACACTATTTATACAGATACCAGGTAGCAGGTATAGCTCATCGTCT
TGTATGTACCGCAGGCCTG--TAAGATCATATTTGTTCCTCTTCCCTTGTAGCTTCAATTTTTGCCGATGAGACGCAGGA
TACTAAACTGGATACGTGCAAAGAGGTTCTTGCTTGAAAAGTGCATAGGGAATTAATTGACCAAGTGTTACAGTTCAGGC
AATGTTTGAAATTTGCTGCAA-TTTTGTGTGGTAATCAGTCATTTCATTCTTTGACCAT--TGCTGATCCTTGTGTTTGT
CCGTTAACTCAACTTGATGTGAT---GCTGTATCTTATGATTTGCCACTCATTCCAACGGAGATACCATTATTCA-TTTA
TGGG-TTATCCTCCTTTTCAAAGAAAAAGATCATTTTATTTTATTTTCTAATTG--------------------------
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>chr3D_1025
CCGCCT--------------------------------------------------------------------------
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-----------------------GCTCCTCCTCCTCGCGGTGGCCGGGGCCGTCCTCCGCCCG------GCCGCGGCGGA
GATCAAGCAGGAGTCCTTCAAGGACGACTCCCGCGGGACCATCCTCTTCGAGAAGTTCGGCTTCTCGCACCGCGGGTCCG
TCTCCATCGCGCTCACCGGCGCCAAGGCCGTCTCCAAGCTCGCCAAGCCGGACCCCGCGCAGCTTGGCTTCTTCCTCCTC
TCCGACGAGGCCCTCTTCGAGGCCATCTACGAGCAGCCGCCGCCCACGGATCTGAACCCCAACCCCGACCCCAACACG--
----------------------GGCTGCGTCCTCGCCAGCCGCTACGTCATCCCGCTCTTCACCTTCGCCGAACTCGACG
CCAGCGGCAACTGCAACAAGACCTTCCCCGTCTCCCACCCCGACGAGTACAGCCTCTTCTTCGCCAACTGCGCGCCCGAG
ACCGCCGTCACCATGGAGGTACGCACCGACATGTACAACACCAACCCGGACGGCTCCAAGGACTACCTCTCCGTCGGCCA
GGCCCCCGTCCCGACGATCTACGCCTTCTTCGCGCTCGGCTACGTCGCCTTCCTGGCCGGCTGGCTCTACCTCACCCTCT
ACCACAACCGCCTCTCGGCGCACCGCATCCACCACCTCATGTCCTGCCTGCTCCTCGCCCGTATGCTCTACTGCATCTCG
GCCGCTGAGGACCAGCACTACATCCGCGTCGCCGGATCTTCGCATGGGTGGGACGTGATGTTCTATCTGTTCCAGCTTGT
TAAGGGTGTGATCTTGTTCGCCGTGATCGCGCTGATTGGTACCGGCTGGTCGTTCCTCAAGCCCTTCCTGCAGGACAAGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGTTGCAGGTTGCAGCTAACATTGCTGCAGCCGTCGTTGGTGAGACCGGGCAG
TACTTGCAAGCATGGTTGACATGGAACCAGATCTTCTTGTTTGTTGATGTGGCCTGCTGCTGCGCGGTGCTCTTCCCAGT
TGTGTGGTCGATGCGTTCGCTGCGCGAGTCATCCAAGACAGACGGCAAGGCTGCACGAACCCTTGCCAAGCTCACGCTCT
TCCGCCAGTTCTACGTCGTTGTGATTGGATACTTGTACTTCACAAGGATCATTGTCTACGCGCTCAAGACAATCACCAAC
TACAAGTACAGATGGGTGAGTGTCGCGGCAGAGGAGGTGGCCACCATGGCATTCTACATGTTCATGTTCTACATGTTCAA
GCCGGCTGAGAGGAACCAGTACTTTGCTCTGGATGACGATGAGGAGGAGGCTGCGGAGATGGCTCTCCGTGAGGAGGAGT
TCGAGCTCTAGAG-------------------------------------------------------------------
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>chr3B_1028
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---------------------CTGCTCCTCCTCCTCGCGGTGGCCGGGGCCGTGCTCCGCCCG------GCCGCGGCGGA
GATCAAGCAGGAGTCCTTCAAGGATGACTCCCGCGGGACCATCCTCTTCGAGAAGTTCGGCTTCTCGCACCGCGGGTCCG
TCTCCATCGCGCTCACCGGCGCCAAGGCCGTCTCCAAGCTCGCCAAGCCGGACCCCGCGCAGCTCGGCTTCTTCCTCCTC
TCCGACGAGGCCCTCTTCGAGGCCATCTACGAGCAGCCGCCGCCCACGGATCTGAACCCCAACCCCGACCCCAACACG--
----------------------GGCTGCGTCCTCGCCAGCCGCTACGTCATCCCGCTCTTCACCTTCGCCGACCTCGACG
CCAGCGGCAACTACAAGAAGACCTTCCCCGTCTCCCACCCCGACGAGTACAGCCTCTTCTTCGCCAACTGCGCGCCCGAG
ACCGCCGTCACCATGGAGGTACGCACCGACATGTACAACACCAACCCGGACGGCTCCAAGGACTACCTCTCCGTCGGCCA
GGCCCCCGTCCCGACGATCTACGCCTTTTTCGCGCTCGGCTACGTCGCCTTCCTGGCCGCCTGGCTCTACCTCACCCTCT
ACCACAACCGCCTCTCGGCGCACCGCATCCACCACCTCATGTCCTGCCTGCTCCTCGCCCGTATGCTCTACTGCATCTCG
GCCGCCGAGGACCAGCACTACATCCGCGTCGCTGGATCTTCCCATGGGTGGGACGTCATGTTCTATCTCTTCCAGCTTGT
TAAGGGTGTGATCTTGTTCGCGGTGATCGCGCTGATTGGTACCGGGTGGTCGTTCCTCAAGCCCTTCCTGCAGGACAAGG
AGAAGAAGGTGCTCATGGTGGTGATCCCGTTGCAGGTTGCAGCTAACATTGCTGCAGCTGTCGTTGGTGAGACCGGGCAA
TACTTGCAAGCATGGGTGACATGGAACCAGATCTTCTTGTTTGTTGATGTAGCCTGCTGCTGCGCGGTGCTCTTCCCAGT
TGTGTGGTCGATGCGATCGCTGCGAGAGTCATCCAAGACAGATGGCAAGGCTGCCCGAACCCTCGCCAAGCTCACGCTCT
TCCGCCAGTTCTACGTCGTCGTGATTGGATACTTGTACTTCACAAGGATCATTGTCTATGCGCTCAAGACAATCACCAAC
TACAAGTACAGATGGGTGAGTGTTGCGGCAGAGGAGGTGGCCACCATGGCATTCTACATGTTCATGTTCTACATGTTCAA
GCCGGCTGAGAGGAACCAGTACTTTGCTCTGGATGACGATGAGGAGGAGGCTGCGGAGATGGCTCTCCGTGAGGAGGAGT
TCGAGCTCTAGAG-------------------------------------------------------------------
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>chr3A_1068
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-----------------------------------------------------CCTCCGCCCG------GCCGCGGCGGA
GATCAAGCAGGAGTCCTTCAAGGACGACTCCCGCGGGACCATCCTCTTCGAGAAGTTCGGCTTCTCGCACCGCGGGTCCG
TCTCCATCGCGCTCACCGGCGCCAAGGTCGTCTCCAAGCTCGCCAAGCCGGAGCCCGCGCAGCTCGGCTTCTTCCTCCTC
TCCGACGAGGCCCTCTTCGAGGCCATCTACGAGCAGCCGCCGCCCACGGATCTGAACCCCAACCCCGACCCCAACACG--
----------------------GGCTGCGTCCTCAACAGCCGCTACGTCATCCCGCTCTTCACCTTCGGCGACCTCGACG
CCACCGGCAACTACAGCAAGACCTTCCCCGTCTCCCACCCCGACGAGTACAGCCTCTTCTTCGCCAACTGCGCGCCCGAG
ACCGCAGTCACCATGGAGGTACGCACCGACATGTACAACACCAACCCCGACGGCACCAAGGACTACCTCTCCGTCGGCCA
GGCCCCCGTCCCGACGATCTACGCCTTCTTCGCGCTCGGCTACGTCGCCTTCCTGGCCGCCTGGCTCTACCTCACCCTCT
ACCACAACCGCCTCTCGGCGCACCGCATCCACCACCTCATGTCCTGCCTGCTCCTCGCCCGTATGCTCTACTGCATCTCG
GCCGCCGAGGACCAGCACTACATCCGCGTCGCCGGATCTTCGCATGGCTGGGACGTCATGTTCTATCTGTTCCAGCTTGT
TAAGGGTGTGATCTTGTTCGCCGTGATCGCGCTGATTGGTACCGGCTGGTCGTTCCTCAAGCCCTTCCTGCAGGACAAGG
AGAAGAAGGTGCTCATGGTGGTGATCCCTTTGCAGGTTGCAGCTAACATTGCTGCAGCTGTCGTTGGTGAGACCGGGCAA
TACTTGCAAGCATGGGTGACATGGAACCAGATCTTCTTGTTTGTTGATGTAGCCTGCTGCTGCGCGGTGCTCTTCCCGGT
TGTGTGGTCGATGCGTTCCCTGCGCGAGTCATCCAAGACAGACGGCAAGGCTGCACGAACCCTCGCCAAGCTCACGCTCT
TCCGCCAGTTCTATGTCGTTGTGATTGGATACTTGTACTTCACAAGGATCATTGTCTATGCGCTCAAGACAATCACCAAC
TACAAGTACAGATGGGTGAGTGTCGCGGCAGAGGAGGTGGCCACCATGGCATTCTACATGTTCATGTTCTACATGTTCAA
GCCGGCTGAGAGGAACCAGTACTTTGCTCTGGATGACGATGAGGAGGAGGCTGCGGAGATGGCTCTCCGTGAGGAGGAGT
TCGAGCTCTAGAG-------------------------------------------------------------------
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------------------------------
>SNPs
S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------------------S----------SS--------------------S-SSSS----S-------
------------------S-------------------------------S-----S------------SSSSSSS----
--------------SS-----S-------SS--------S----------------------------------------
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--------------S-SSS--------SSSS-----------S-----------S-----S---------SS--------
-------S----------S------SS--------S----S---------S----S-S------S-----S---S-----
------S--------S---S---------S-S------S----------SSSSSSSSS--------------SS-----S
-S-S--------------S---------S-------S------S---S-S------S-----S------SSS-SSSSSS-
----------S-------------S--SS-------S--------------------S---------------SS-----
-------SS-SS-------S-S--S------S-------------------------------------S-S-----S--
------------SSSSSS-S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--S----------------------------------------------------SSSSSSS--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------S--S-
-------------------------------------------------------------------S------------
--------------------------------------------SS----------------------------------
-------------------------------------------------------------------SSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------------------------------------------------------------------------S
---------------------S-------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----S-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-----------S-----------------S---------------------S----------------------------
--------------------------------------------------------------------------------
---------S---------SS----------------------S------------------------------------
---------------------------S-----------------S-S--------------------------------
---------------------------------S-------------------------SS--S--------S-------
----------S---S------S-SSS---------------------------S-------S--S---S-----------
----S-------S----------S----S-S-----------------------SSS-SS-SSSSSSSS-SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----S----S-----SSSSSSSSSSSS-S-SS--------------------------------
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-----------------------S--------------------------------------------------------
---S--------------------S-----
>forward_24
----CCCCTCTCGTTGCTATGCAT--------------------------------------------------------
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>reverse_2548
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GTTCTTCCTCCTC
GCCGAC--------------------------------------------------------------------------
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>forward_1540
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TATGGGTAGGCGAGAGAGGG------------------------------------------------------------
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------------------------------
>reverse_3732
--------------------------------------------------------------------------------
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---------------------------------------------------TCCATGATTGCTCTCTTGGCG--------
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------------------------------
