>input_sequence_53261
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-----------------------------------------------------------------------------ATG
TCGTTCGCTTACAAGTTCAGGTACATCGTCGTCGGCGACACAGGTGCGTGCC-TTCTTCTCGACGCCGCGCCGCCTCGCG
CGCTCTCCCGCTGTCCCATCTGTTCTCTTGCGCCTCTAGTCCATC-------GTCCCCTGATTCTATCATCGGTTCGTTG
CGTGATCTCGAGAATCCATG-----CCGGTTATAAGTATAGAAAGCTCCGCCTTCGTCACTCGAAATCGGCCGGCCGGCG
AGGGTGATCCTGTGATGCGATGCCTCGTGTGTAGAAGGCCGAGACCTTGTTCGTTTTTCTTCGATGGTTTGGACGATCAA
TCTTAG--------------------------------------------------------------------------
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-------------------------CTAGCATAAATCTCTTTGAAACCATGACCCTATATATGACCATGTTAC----GAA
TTTGCTGTCCCAGGGGTTGGGAAGTCATGCCTCCTGCTGCAGTTCACCGACAAGCGGTTCCAGCCCGTGCACGACCTGAC
CATCGGCGTCGAATTTGGACAGCGCATGGTCACCATCGGCAAGAAGAAAATAAAGCTTCAGATCTGGGACACGGTCTGTT
AACTTAATTGTTCCGCTATATG----------------------------------------------------------
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-------------------------------------------------------------------TATAAACCTTCAG
ACGAAACTAG----TTAAATGCATTCTCTACTGCTTTCAACATCATATCTTTATTATAAACCTCTACTGAAGTGAACT--
--GCATCCTGATGATGCAGGCAGGCCAGGAGGCTTTCAGGTCAATCACTAAATCCTACTACAGAAGTGCGGCCGCTGCTC
TTCTCGTTTATGACATCACCAGGTACATTCAACAGCTTAAGCAT----TTTAAGTTACCCTTGTTTTAGGAGGATTTACT
ACTCGTAGTCAGATATGAATGTCGATT--TTTCCTCTGATGGAGAACAGGAGGGAGACCTTCAACCACGTCGCGAGCTGG
CTGGAAGAAATGAGGGAGCAGGCGGACGGCAACAACAACATCACCATCATGCTGGTCGGAAACAAATCAGATTTAGCTCA
GAGGCGAGCCGTCAGCACGGAAGAGGGCGAGCAGTTCGCCAAGGAGAACGGCCTCGCCTTCATGGAGACCTCGGCCAGGA
CCCGGCACAACGTGGAGGAGGTAACTCGAAGCACCGCATCGTGTCGCAGCGGCGCACAATTCATTCGCCATGGCCTTTTC
CTCACATGACCTATA-TATGCACGCAGGCATTCCCTCAAAGCTCGTCCATGGTGTGCCAGAAGATCCAGGAAGGTGCCAT
TGATCTGTCCAAGGTGAGTGCCGTACTGCATTATGTTGTCTTGTATTTTTTGCTAGCAGGTGCTTATGGGGTTCATTTGA
CCAT----------------------------TGTTGTTTCTCTTGCAGAGTAGTGGTGTCACGCCCGGAGGTGATGATT
TCAGTCGTCTCGAGCCTCTGCCT---CCGTCTCGAGCCTCCGTCTGCTGCACCA-------GCTGA--------------
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>chr5D_1_TraesCS5D01G264100
AGCCGAATGCTAAGCTCTGGCTCTTCTCTATGCTAGAAGCGTTATCGCATGCATCTTTTGTCAAACTCTCGGTGACACTT
TGGGCAGTTTGGTGGGCTCGTCGTCAGGCAATCCACGAAGGAATCTTCCAGAGTCCACACACTACACACAATTTTGTGGA
GAGATTCTTTGGCGAACTACAAAGTCTGGGAGACAGCAAGCAGGCCAACGGCTGCATCGGGTGGGACAAGGAT-------
--T---------GTACCCTCGACTCGGCGCAAGGCTCAGCCAACAGGTTTTGCGAAAATTCATGTGGACGCCGGGGTTGG
CCGCTTCAACAGAGGTGGCTCGGTTGCGGCCATATGCGGGGATGATCATGGAAACTACCTGGGC-AGCTCGGCATTGGTG
ATTCCGGGGGTGGTTGATGTGGCGACGCTAGAAGCAATCGCTTGCCGTGAAGCACTTTCGCTGGCAGAAGATTTGCACAT
TCATGAGCTGGTCATTGCTTCGGACTCCAAGCTGATGATCAACGACATCAATAGAGGCTAT-------------GGAGGG
AAGCACGGGGCTATCATCTCGGAGATTCGCTTGCGAGCCGCTGCTTTTAATTGTACCTTTGTTTTTTAGGGTCGCGCGTT
GAATGGT-GATGCTCATATCATAGCTAGATCTTCGCTTTCTGTTCAT-GGGGGCGCCATCTTTGGCTTGTCCACCCCCAT
GCAAATTGTATCCCACAAACTGTGGCTTATAATCAATAAAGTGTGT-CTTACCCCTAAAAAAAAAGAAATCCCGTACCTG
AATCCGTCCCTAACGCATCTACACTGTTGGTTACCGACTAGGAAACAACACGGCCACGGGCCTGGTCGCCTCATATCCCG
CCGTACGTGCAACGCAAACCCTCGGCAGCCCACGTCGATCCACCGCTCATCTAAATATAATCCCGCGACCTCGCCTCTCA
CGCGAACTTGTCGAGTCTCTGGTTCGCCGTCAAATCTAAAGCGGGAAGGTGCGTGGA--CTCGGGGATTTGGGACCCATG
TCGTTCGCTTACAAGTTCAGGTACATCGTCGTCGGCGACACAGGTGCGTGCC-TTCTTCTCGACGCCGCGCCGCCTCGCG
CGCTCTCCCGCTGTCCCATCTGTTCTCTTGCGCCTCTAGTCCATC-------GTCCCCTGATTCTATCATCGGTTCGTTG
CGTGATCTCGAGAATCCATG-----CCGGTTATAAGTATAGAAAGCTCCGCCTTCGTCACTCGAAATCGGCCGGCCGGCG
AGGGTGATCCTGTGATGCGATGCCTCGTGTGTAGAAGGCCGAGACCTTGTTCGTTTTTCTTCGATGGTTTGGACGATCAA
TCTTAG--------------------------------------------------------------------------
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-------------------------CTAGCATAAATCTCTTTGAAACCATGACCCTATATATGACCATGTTAC----GAA
TTTGCTGTCCCAGGGGTTGGGAAGTCATGCCTCCTGCTGCAGTTCACCGACAAGCGGTTCCAGCCCGTGCACGACCTGAC
CATCGGCGTCGAATTTGGACAGCGCATGGTCACCATCGGCAAGAAGAAAATAAAGCTTCAGATCTGGGACACGGTCTGTT
AACTTAATTGTTCCGCTATATG----------------------------------------------------------
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-------------------------------------------------------------------TATAAACCTTCAG
ACGAAACTAG----TTAAATGCATTCTCTACTGCTTTCAACATCATATCTTTATTATAAACCTCTACTGAAGTGAACT--
--GCATCCTGATGATGCAGGCAGGCCAGGAGGCTTTCAGGTCAATCACTAAATCCTACTACAGAAGTGCGGCCGCTGCTC
TTCTCGTTTATGACATCACCAGGTACATTCAACAGCTTAAGCAT----TTTAAGTTACCCTTGTTTTAGGAGGATTTACT
ACTCGTAGTCAGATATGAATGTCGATT--TTTCCTCTGATGGAGAACAGGAGGGAGACCTTCAACCACGTCGCGAGCTGG
CTGGAAGAAATGAGGGAGCAGGCGGACGGCAACAACAACATCACCATCATGCTGGTCGGAAACAAATCAGATTTAGCTCA
GAGGCGAGCCGTCAGCACGGAAGAGGGCGAGCAGTTCGCCAAGGAGAACGGCCTCGCCTTCATGGAGACCTCGGCCAGGA
CCCGGCACAACGTGGAGGAGGTAACTCGAAGCACCGCATCGTGTCGCAGCGGCGCACAATTCATTCGCCATGGCCTTTTC
CTCACATGACCTATA-TATGCACGCAGGCATTCCCTCAAAGCTCGTCCATGGTGTGCCAGAAGATCCAGGAAGGTGCCAT
TGATCTGTCCAAGGTGAGTGCCGTACTGCATTATGTTGTCTTGTATTTTTTGCTAGCAGGTGCTTATGGGGTTCATTTGA
CCAT----------------------------TGTTGTTTCTCTTGCAGAGTAGTGGTGTCACGCCCGGAGGTGATGATT
TCAGTCGTCTCGAGCCTCTGCCT---CCGTCTCGAGCCTCCGTCTGCTGCACCA-------GCTGAGCATAGCTTGGACG
ACTCAGTTCCGTCTCTCGGATCTTGTTTAATACTAGTGCAAATCAGTAGTAACTCCATGCTTTCAACCTCGAGCATATAG
CCATATATATAGATCACTTGGCAGTT-AAAATGATGTACATCGTTTCATAGTCTCTCACTTGTCTTGTTCTCCCGAAGTT
ATATTTTTTTACTAATGTCTTATTTTTAGTTTACTA----TTTTTGTCTTGTAAGTATTAAAAAAAGAACGAAAATCAGA
AATTTCTTTTGACCCCAGGCTCCATGGAGCTCGGATATTGAAAAAATCCAAACTAAGATTTTTTTTTTAGTTTTAAAATT
TCTAGAGAACACGCCCACACAGACATATTCCCTCCGTCCGGAAATACCTATCATAGAAATGGATGTATCTACACATATTT
TAGTTTTAAATACATCCACTTTTATCCATTTGTGGACAAGTAATTCCGGACAGAGGGAGTATTAATGTATACTACTTGTT
TGTAAAGTTCCATGATGAAATACATTAGGAGTCC--------------------CACACATACATATTGATGTATACTAC
TTTTTGTAAAGTTTCATGATGAAATACATTTTGGTGTGAGGT----AAAAAAAACAAATTCAGGCCTTTTG---------
------------TAAAAACTAGACGACATCGCACGCGTTGCTGTGAGGACTTT---------------------------
--------TAAGCATAAATGAGGATTTGATCAAATAAATGATACTACGACGTACGGTATTC-------------------
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----------------------------------------------------------------TCGAATTTCGAATTAT
TACATCATGCACATCAATCTGGAGAGCAAAATATTTCTATGT-------------------------------------T
AGTGATAAGTGACGTAAGCAACATTGTACAGATAATTTGTGCACAGGAAGCCAATGAAGCAT----GTAGGTCGTGTGTG
GCATTGTGGATGTTTAACATGCTTGGTTGATGGTGGAGTATTAACGAAACACAGCAAAATACAGTATTATCCAGGGGATT
AAGGAAAGAATACAGGTTGATATATATATATACACACACACTAAATGCGTATTGAAACAACCAGGGATTTAGTGC
>chr3D_1
AGCCGAATGCTAAGCTCTGGCTCTTCTCTATGCTAGAAGCGTTACCGCATGCATCTTTTGTCAAACTCTCGGTGACACTT
TGGGCAGTTTGGTAGGCTCGTCATCAGGCAATTCACGAAGGAATCTTCCAGAGTCCACACGCTACACACAGTTTTGTGGA
GAGATTCTTATGCGAACTACAAAGCCTGGGAGAC----AGCAGGCCGACGGCTGCATCGGGCGGGACAAGGAT-------
--TTCAAATGTTGTACCCTCGACTCGGCCCAAGGCCCCGCCAACAGGTTTTGCGAAAATTCATGTGGATGCCGGGGTTGG
CCGCTTCAACAAAGGTGGCTCGGCTGCTGCCATATGCAGGGATGATTATGGAAAGTATCTGGGC-AGCTCGACATTGGTG
ATTTCGGGGGTGGTTGATGTGGTGACGCTAGAAGCAATTGCTTGCCGAGAAGCATTGTCGCTGGCTGAAGATTTGCACAT
TCATGAGCTGGTCATTGCTTTGGACTCCAAACTGGTGATCAACAACATCAACAAAGGCTAC-------------AGAGGG
AAGCACGGGGCTATCATCTCAGTGATTCGCTTGCGGGCCTTTGCTTTTAATTGTACCTTTGTTTTTGAGGGTCGTGCGTC
GAATGGT-GATGCTCATACCATAGCT-GATCTTCGCTTTCACTTCAGCGGGGGCGCCATCTTTGGCTTGTTCACCCCCAT
GCAAATTGTATCCCACAAACTATGGCTTATAATCAATAAAGTGTGT-CTTACCCCTAAAAAAA-----------------
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>chr6A_1
AGCCGAACGCTAAGCTCTGGCTCTTCTCTTTGCTAGAAGCGTCATCGCATGCATCTTTTGTTCAACTAGCGGTGACACTA
TGGGCAATTTGGTGGGCTCGTCGTCAGGCAATCCACGAAGGAATCTTCCAGAGCCCACACGCCACACACAGTTTTATCGA
GCGCTTTATAGCCGAACTTCATAGTCTGGGAGATGGCG----GGGCATCGGTTGCAACTGGCGGCACAAGGAT-------
--T---------GTCCCCTGTACTCGGCCCAAGCCTCCGCCTAGAGGCTTTGCGAAGATCCACGTGGATGCAGGGGTTGG
CCGGTTCAATAGAGGTGGCTCGGCTGCGGCAATATGCAGGGATGATCAGGGAAACTACCTGGGT-AGCTCGGCATTGGTG
ATCCCGGGGGTAGTTGATGTGGCGACGTTAGAAGCCATCGCCTGCCGTGAAGCTTTGTCCTTGGCAGAAGATTTGTACGT
TCATGACTTGATTATCGCTTCGGACTCCAAGCAGGTGATCAACGACATAAACAGAGGCTAT-------------GGAGGG
AAGCATGGGGCTATTATCTCGGAGATTTGCTTTCGAGCTGCTGCTTTTAATTGTACCTTTGTTTTTGAGAGCCGTGCATC
GAATGGT-GATGCTCATACTATAGCTAGATCTTCGCTTTCTCTTCAGCGGGGGCGCCATATTTGGCTTGTTCACCCCCAT
GCAAACTGTATCCCACAAACTGTGGCTTATAATCAATAAAGCGTGT-TTTACCCCTAAAAAAAA----------------
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>chr4B_1
AGCCGAACGCCAAGCTCTGGCTCTTGTCTTTGCTAGAATCGTTACCGCATGCATCATTTGTTCAACTAGCGGTGACACTA
TGGGCAATTTGGTGGGCTCGTCGTCAGGCAATCCACAAAGGAATTTTCCAGAGTCCACACGCCACACACAGTTTTGTCGA
GCGCTTTATAGCCGAACTTCATAGTCTGGGAGATGGCG----GGGCATCAGCTGCAACTGGTGGCACAAGGAT-------
--T---------GCCCCCTGTACTCGTCCCAAGCCTCCGCCTAGAGGCTTTGCAAAGATCCACGTGGATGCAGGGGTTGG
CCAGTTCAATAGAGGTGGCTCGGCTGTGGCAACATGCAGGGATGATCAAGGAAACTACCTGGGT-AGCTCGGCATTAGTG
ATCCCGGGGGTAGTTGATGTGGCGACGTTAGAAGCCATCGCCTGCCGTGAAGCTCTGTCCTTGGCAGAAGATTTGAACGT
TCATGACCTGATTATCACTTCGGACTCCAAGAAGGTGATCAACGACATAAACAGAGGCTAT-------------GGAGGA
AAGCACGGGGCTATTATCTCGGAGATTTTCTTTCGAGCCGCTGCCTTTAATTGTATCTTTGTTTTTGAGGGTCGTGCATC
TAATGGT-GATGCTCATACTATAGCTAGATCTTCGCTTTCTCTTCAACGGGGGCGCCATATTTGGCTTGTTCATCCCCAT
GCAAACTATATCCCACAAACTGTGGCTTATAATCAATAAAGTGTGTTTTTACCCCTAAAAAAA-----------------
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>chr2A_1
AGCCTAACGCCAAACTTTGGCTGTTTACCATGATGGAGCTGTTATCCCATGTATCTTTTGTCAAACTGTCAGTAACCCTA
TGGGCAATTTGGTGGGCTCGATGACAAGCTATCCATGAGGGAATATTCCAAAGCCCTTACTCCACCCATGATTTTGTTCA
GAGATTTATAAGTGAGCTTCAGAGTTTGGAAGCCCGCAAGCCG----ATAGGCAACACAACGGTAACAAGGCAACCCAAC
GCT---------GCACCTAGAGCCCGGCCAAAGGCGCCACCAGCAGGCTTTGCCAAGATTCATGTTGACGCCGGTATGGC
GCGTTTCAATAGGGGTGGTTTAGCAGCAGCTATATGTAGAGATGGTGAAGGAAACTACTTGGGC-ATCGCAGCATTGGTG
ATCCCAGGGGTCGTGGATGCAGCAACACTGGAAGCTATTGCGTGTCGGGAGGCGCTGTCTTTGGCTGAAGACTTGCACAT
TTGAGATTTTGTCATAGCATCAGACTCCAAGCAGGTGATCAATGATATTAACAAGGGCTATAAG-------------GGC
AAGTATGGAGCGATCATATCAGAAATAAGCTTACGAGCTTCTGTTTTTAATTGTACTTTCGTTTTCGAAGGCCGAGCGTC
GAATAGC-GATGCTCATAATATAGCTAGATCTTCTCTTTCTCTTCAGCAGGGGCGCCATATTTGGCTTGTTCATCCCCAT
GCAAATTGTATCCCACAAACTGTGGTTTATGATCAATAAAGTGTGC-CTTACCCCTCAAAAAAA----------------
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>chr1A_1
AGCCTAACGCCAAACTTTGGCTGTTTACCATGATGGAGCTGTTATCGCATGTATCTTTTGTCAAACTGTTAGTAACCCTA
TGGGCTTTTTGGTGGGCTCGACGACAAGATATCCATGAGGGAATATTCCAAAGCCCTTACTCCACCCATGATTTTGTTCA
GAGATTTATAAGTGAGCTTCAGAGTTTGGAAGCCCGCAAGCCG----ATAGGCAACACAACGGTAACTAGGCAACCCAAC
GCT---------GCACCTAGAGCCCGGCCGAAGGCGCCGCCGGCGGGCTTTGCCAAGATTCATGTTGATGCCGGTGTGGC
GCGTTTCAACAGGGGTGGTTCAGCAGCAGCTATATGTACAGATGGTGAAGGAAACTACTTGGGC-AACACATCATTGGTG
ATCCCAGGGGTCGTGGATGCAGCAACACTGGAAGCTATTGCGTGTCGGGAGGCACTGTCTTTGGCTAAAGACTTGCACAT
ACGAGATTTTGTCATAGCATCAGAC-CCAAGCAGGTGATCAATGATATTAACAAGGGTTATAAG-------------GGC
AAGTATGGAGCGATCATATTAGAAATAAGCTTACGAGCTTCTGCTTTTAATTGTACTCTCGTTTTCTAAGGCCGAGCGTC
GAATAGC-GATGCTCATAATATAGCTAGATCTTCTCTTTCTCTTCAGCAGGGGCGCCATATTTGGCTTGTTCATCCCCAT
GCAAATTGTATCCCACAAACTGTGGTTTATGATCAATAAAGTGCGC-CTTACCCCTCAAAAAA-----------------
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>chr7B_6
-----AACGCCAAGCTTTGGCTATTCTCGCTGGTAGAAGCATTATCGCATGCATCTTTTGTCAAACTCTCGGTGACGCTC
TGGGCAGTTTGGTGGGCTCGACGTCAGGCAATTCACGAAGGAATTTTTGAGAGCCCCTATGTTACTCACAGCTTCGTGGA
GAGATTCATAAGCGAGCTACAGAATCTGGAAGAGAGCAAGCCG----AAGGTTGAAACAGGAGGAACAAGGAGCACACAC
GCG---------GCACCCACATCTCGACCAAAGGCACCGCCCACGGGATATGCCAAAATCCATGTGGATGCGGTAGTCGC
TCGTTTCAACAGAGGTGGATCGGCTGCCGCAATATGTAGAGATGACAATGGAAACTACATGGGAAAGTTCAGCTCTAGTG
ATCCCAGGGGTGATGGACGTGGCGACGTTGGAAGCAATAGCCCGCCGGGAGGCGTTGTCACTGGCTGAAGATTTGTAGAT
CCATGACTTCACTATTGCTTCAGACTTTAAACAAGTGATCAATGAC-------------ACAAATAGGGGCCACGGAGGC
AAGCATGGAGCTATCATATCAGAGATCAACTTGCATGCTTCAGCGTTTAACTGTATCTTTGTCTTCTAGGGCAGGGCGTC
GAACGAAAGATGCTCACAACATTGCTAGATCCTCGCTTTCTTTTCAGCAGGGGCGCCACATGTGGCTTGTTCATTCCCAT
GCAAATTGTATCCCATAAACTGTGGTTTATGTTCAATAAAGTGTGT-CTTACCCCTAAAAAA------------------
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>chr1D_10
---------CTAAGCTCTGGCTCTTCTCTTTGCTAGAAGCGTTATCGCATGCATCATTTGTTCAACTAGCGGTGACACTA
TGGGCAATTTGGTGGGCTCGTCGTCAGGCAATCCACGAAGGAATCTTCCAGAGTCCACACGCTACACACAGTTTTGTCGA
GCG-TTTTTAGCCGAACTTCAAAGTCTGGGAGATTGCG----GGGCATTGGCTGCACCTGGCGGGACAAGGAT-------
--T---------GTTCCCTGTACTCGGCCCAAGCCTCCGCCAAGAGGCTTTGCGAAGATCCACGTGGACGCAGGGGTTGG
CCGTTTCAACAGAGGTGGCTCGGCTGCGGCAATATGCAGGGATGATCATGGAAACTACCTGGGT-AGCTCGGCATTGGTG
ATCCCAGGGGTGGTTGATGTGGCGACGTTAGAAGCCATCGCTTGCCGTGAAGCTTTGTCCTTGGCAGAAGATTTGCACAT
TCATGACGTGGTCATTGCTTCGGACTCCAAGCAGGTGATCAACGAC-------------ATAAA-------------GGG
AAGCACGGGGCTATTATCTCGGAGATTCGTTTTTGAGCTGCTGCTTTTAATTGTACCTTTGTTTTTT-GGGCCATGCATC
GAATGGT-GATGCTCATACCATAGCTAGATCTTCGCTTTCTCTTCAGCGGGGGCGCCATATTCGACTTGTTCA-CCCCAT
GCAAACTGTATCCCACAAA-------------------------------------------------------------
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>chr1A_42
-----------------------------------------TTATCGCATGTATCCTTTGTCGAGCTGTCAGTAACACTA
TGGGCAATTTGGTGGGCTCGACGTCAAGCTATCCATGAGGGAATTTTCCAAAGCCCTTACTCCACCCATGACTTCGTTCA
GAGATTTATAAGCGAGCTTCAGAGCTTGGAAGCCCGCAAGCCG----ATAGACAACACAGGGGTAACAAGGCAACCAAAC
GCT---------GCGCCTAGAGCACGGCCGAAGGCGCCGCCAGCGGGCTTTGCCAAGATTCATGTTGACGCCGGTGTGGC
ACGGTTCAACAGGGGTGGTTCAGCAGCAGCTATATGTAGAGATGGTGAAGGAAACTACTTGGGC-AGCTCTGCCTTGGTG
ATTCCAGAGGTCGCGGATGCAGCAATATTGGAAGCTATTGCCTGTCGGGAGGCGCTGTCTTTGGCCGAAGACCTGCAGAT
TCGAGATTTTGTCATAGCGTCAGACTCCAAGCAGGTGATCAATGATATCAACAAGGATTATAAG-------------GGC
AAGTATGGAGCGATCATATCAGAAATAAGCTCACGAGCTTCTGTCTTTAATTGTATCTTCGTTTTCGAAGGCCGAGCGTT
GAATAGC-GATGCTCATAATATAGCTAGATCTTCTCTTACTCTTCAGCAGGGGCGCCATATTTGGCTTGTTCACCCCCAT
GCAAATTGTATCCCACAAACTGTGGTTTATGATCAATAAAGTGTGC-TTTACCCCTAAAAAAACAAAAAAT---------
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>chr5B_751
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-----------------------------------------------------------------GAAATTCCGTACCTG
AATCCGTCCCTAACGCATCTACACTGTTGGTTACCGACTAGGATACAACATGTCCACGGGCCTGTTCGCCTCATATCTCG
CCGTACGTGCAGCCACCA----------------TCGATCCACCGCTCATCTAA---TAATCCCGTGACCTCGCCTCTCA
CGCGAACTTGGCGAGTCTCTGGTTCGCCGTCAAATCTAAAGCGGGAAGGTGCGTGGACTCTCGGGGATTTGGGAGCCATG
TCGTTCGCTTACAAGTTCAGGTACATCGTCGTCGGCGACACAGGTGCGTGCC-GTCTTCTCGACCC--------------
--CTCTCCTGCTGTCCCATCTGTTCTCTTGCGCCTCTTGTCCACTCCATCGTGTGCCCTGATTCTATCATCGGTTCGTTG
CGTGATCTCGAGAATCCATG-----CCGGTTGTAAGT--AGAAAGCTCCGCCTTCGTCACTCGAAATCGACCGGCCGGCG
AGGGTGATCCTGTGATGCGATGCCTCGTGTGTAGAAGCTCCAAACCTTGTTCGTTTTTCTTCGATGGCTTGGAC---CAA
TCTTAGTTAGCCGCATGTATCAGTTTGCTCGGTGCAGCTATATGATGGCCGCAGTT----TCGGCGCAACTGTAGGATTT
TATCCTTTCAGTCGAAAAGCCTTGTATATACGATTGCAGTGACCTAGGACA--AGCCAAGAAGGAAACCATATCATAGTG
TTCTTGCATCCATTGAAAAGTGTTACTAGCATAAATCTCTTTGAAACCATGACCATATATATGACCATGTTAC----GAA
TTTGCTGTCCCAGGAGTTGGGAAGTCATGCCTCCTGCTGCAGTTCACCGACAAGCGGTTCCAGCCCGTGCACGACCTGAC
CATCGGCGTCGAATTTGGACAGCGGATGGTCACCATCGACAAGAAGAAAATAAAGCTTCAGATCTGGGACACGGTATG--
---TTAATTGTTCCGCTATGCTATGAAGGAATGGCTACATTTCAGTCGACTGAGTTTTTGAGTTAGGGTCAGTCGATTCA
TGGACCGTTGGATTAAAATCGTGTGGCAGCTAGATCTTCTTTTTCCTCAGCTCCCCAACCGCCAAACGTGCCGCCGACCG
AACCGCCGGCCACCGCCACCCGCGGCCGGCAGCGCTCCCGCGACCGCCTCGCCGCCCGCCCTCCCCAGAACCGCCCCCCA
CCGCCGGTCTAGCCGCTGCTGCCGCCATCCCTCTAGCCCCACCCGCGACTGAATTTTTCTCCGGCGAATCCCCACGCCAC
CGCCCCGCCACCGCCACCCGCGGCCGGCGGCGCTCCCGTGACCGTCTCGCCGCCCCGCCCTCCCCAGAACCGCCCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCGCCATCCCTCTAGCCCCGCCCGCGACTGGATTTTTCTCCGGCGAATCCCCACGCCACCGCCCCGCCA
CCGCACCCCACCACCGCCGGCGACCACCGTCCCCACCCTGAACCTTGAAGTGTAGCTAAATCGATACTATAAACCTTCAG
ACGAAACTAATTAATTAAATGCACCGTCTACTGTTTTCAAGGTCATATCTTTATTATAAACCTCTACTGAAGTGAACT--
--GCAT------GATGCAGGCAGGCCAGGAGGCTTTCAGGTCAATCACTAAATCCTACTACAGAAGTGCGGCCGCTGCTC
TTCTTGTTTATGACATCACCAGGTACATTCAACAGCTTAAGCAT----TTTAAGATACCCTTGTTTTAGA---ATTTACT
ACTCGTAG----ATATGAATGTCGATTTTTTTCCTCTGATGGAGAACAGGAGGGAGACCTTCAACCATGTTGCGAGCTGG
CTGGAAGAAATGAGGGAGCAGGCGGACGGCAACAACAACATCACCATCATGCTGGTCGGAAACAAGTCAGATTTAGGTCA
GAGGCGAGCCGTCAGCACGGAAGAGGGCGAGCAGTTCGCCAAGGAGAACGGCCTCGCCTTCATGGAGACCTCGGCCAGAA
CCCGGCACAACGTGGAGGAGGTAACTCGAAGCACCGAATCGCATCGCAGCGGCGCGCAATTCG---GCCATGGCCTTTCT
CTGACATGACCTATA-TATGCACGCAGGCATTCCTTCAAAGCTCGTCCAATGTGTACGAGAAGATCCAGGAAGGCGCCAT
CGATCTCTCCAAGGTGGGTGTGTCTGCATAGTG--------------TTTTGCTAGCAGCTGCTTATCGGGTTAATTTTT
TTAAAACAAGATTATCGGGTTAATTTGTCCACTGTTGTTTCTCTTGCAGTGTAGTGGTGTCACGCCCGGAGTTGATGAAT
TATGCAACCTTGGCAGGGACACGCTGCCGTCTGGAGCCTACGGCTGCTGCAGCA-------GCTGAGCA-----------
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>chr5A_973
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-----------------------------------------------GGTGCTTGGACTCTGA---ATTTGGGAGCGATG
TCGTTCGCTTACAAGTTCAGGTACATCGTCGTCGGCGACACAGGTGCGTGCCCTTCTTCTCGACCCCGCGCCGGCGCGCT
CCCGATGT-------CCATCTGCTCTCTTTCGTTTCTAGTCCATC-------GTGCCCTGATTTTATCATCGGTTTGTTG
CGTGATCTCGTACGCGAATCCACTTCCGGTTATAA---------------------------------------------
------------------------------GTAGAAACTCGAGATCTTGTTCGTTTTTCATCGACGGCCGCCGTCCAACA
ACGTGCTGCCGCGCGGCTCGGATCGTACTT------GCTATATTATGGCTACAGTTTCGATCGACGCAACTGTAGGGTTT
TATCTTTTCAGTAGAAAGCCT---TGTATATGCTTGCGTTGGCCTAGGCCAGAAGCCAAGAAGCAACC------------
------------------------------------------------------------ATGACCATGTTAATTATGAA
TTTGCTGTCCCAGGAGTTGGAAAGTCATGCCTCCTGCTGCAGTTCACCGACAAGCGGTTCCAGCCCGTGCACGACCTGAC
CATCGGCGTCGAATTTGGGCAGCGGATGGTCACCATCGGCAAGAAGAAAATAAAGCTTCAGATCTGGGACACGGTCCGTA
AGTTGTTCCG----------------------------------------------------------------------
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------------------------------------------------------------------CTATGAACCTTCAG
ACGAAACTAAG--------TGCATTCCCTACTGTC----------------------AAACCTTTACTGAAGTGATCTGC
ATGCAT------GATGCAGGCAGGTCAGGAGGCTTTCAGGTCAATCACAAAATCCTACTACAGAGGTGCGGCCGCGGCTC
TCCTGGTTTATGACATCACCAGGTACATTCACCAGATTAAGCATGCATTTTAAGTTGCTGTCGTCTTAGAATTTTACCAG
TAGAC--------TAAGAATGTCGATCC-TTTCCTCTGGTGATGAGCAGGAGGGAAACCTTCAACCACGTCGCGAGCTGG
CTGGAAGAAATGAGGGAGCAGGCGGACGGCAACAACAACATCACCATCATGCTGGTCGGAAACAAATCAGATTTAGGTCA
GAGGCGGGCCGTCAGCACGGAAGAGGGCGAACAGTTCGCCAAGGAGAACGGCCTCGCCTTCATGGAGACCTCGGCCAGGA
CCCGGCACAACGTGGAGGAGGTAACTCGACGCACCGAATCGCATCGCGGCGGCGCGCAATTCA----CCATGGCATTTTT
CTGACATGACCTGACCTATGCACGCAGGCATTCCTTCAGAGCACGTCCATGGTGTACGAGAAGATCCAGGAAGGCGCCAT
CGATCTCTCCAAGGTGAGTGTC----------------------------TGCTAGCAGCTGCTTATCGGGTTAATTTTC
TTAAAACAAGATTATCGGGTTAATTTGTCCACTGTTGTCTCTCTTGCAGTGTAGTGGTGTCACGCCCGGAGTTGATGAAT
TATGCAACCTTGACAGGGACACGCTGCCGTCTGGAGCCTAAGGCTGCTGCAGCAGCTGAGGGCTGAGCATAACTTGGACG
ACACAGTTCCGTCTCTCAGATGATGTTTGATACTAGTGCAAATCTGTAGT------------------------------
--ATATATGTAGATCACTTGGCAGTTTAAAATGATGTAAAGCGTTTTACAGTCTTTCAATGT------------------
-TATATTTTTTCTAGTGTCTTGATTTTTACTTTGCTATACTTTTTGTCTTGTCGAGAGCGAGAACTTG----------GA
AATTGCTTTTGGCTCCCGGCTCCATGGAGCCTGGATATTGAAAAATTCAAAACTATGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGAGAG---------------------------------------------
-------------------------------------------------------------------------ACTAGTT
TGTAAATTTTCATGATGAAACATGATTTTTAAGTTTTAAAAATTTCTAAAAACACACACATACATATGGATGTATACTAA
TTTTTGTAAACTTTCATGATGAAATACATTTTGGTGTTGGGTACACAAAAAAGACAAACTCAGGCATTTCTAGCACATAC
TAGTATTCAGTATAAAAACTAGACGACACCGCACGAGTTTTTCTGCAAAAAAAAAAGACACCGCACGAGTTGCTGCGGGG
ACTTTTAATAAGCATAAGTGAGGATTTGATGAAATAAAAAAATTGACTCTGAAAGGCAGGTGCCCTGCCTTTTCATTGAA
GATTAGGGGCTCATTCGGTTTGGAGGATTTTATAACGTAGGAATTAGTACTAGTATAAGAATTTTATAGGATGACACTTG
CCATCCTAAGGAATTGACTCGCCTCGTTCCTACACGTAAAATGAGCTTTGAGTGGATGTGTAATTTCCTTCAAAAGCATA
GGAAATGAATAGTATTCCTATAAAATTCCTGTACACATTTCCTACAAACCGAATGCATCTATAGGAAATTTTCCTCCGGG
ATCCTTATTCCTATGTGTTTCCTATGAAAATCCTCCAAACCGAATAGGCCCTAGGAATTTACATGAGGGAGCAGATGTAA
GGAAGAGAACGCAGTCATTGGAGATGCGGCATGAAACAACTACATTAAAGAGCTACAGCTATCACTTCTAAATCAGCTTT
CACCAAAGCGATCACCCCATTTTCCGGTGAATACTCTTCTGTTTCGCTCATTCTAAATGTGCCACGCAAAGTAGGCCGTG
GCGGCAGTGTTCTTCTTGGGCCCTTGGTAGCAGAAATGCCACAAGTCTGGATGGAGTCCAAAGAGCTAGGAAAGATCAGA
CAATGTTGTGGCAAGGTATAGTGCAGTTTGAACCAAACTTCCTGGGCAAAAGTGCAAGTGCTGAAGAGGTGCAGCGCAGA
CTCAAGCTCCTGATTGCAGAAGGAGCGCACATTGTTATGATCGGAGCCTTGGGCACGCAATTTGTCTGCAGACTCAGGGA
GTGTTTGGTTCAGAAGTCCTAGGACTTTTTCTAGTCCCAGGGACTAATCAAAAAAGACTCTCCAGTAGAGTCTTTTTCTA
GTCCCTGTAAAAAAAGTCCCTCCCGTTTGGTTCCTAGGGACTTTTTAGGGACTTTTTCTAATTTCTGGGACTAAAAAGTC
CCTGAACCAAACACCCCCTCAAGCTTCTGATTGCAGAAGGAGCACACATTGTTATGACCGGAGCCTTGGCCCTTGGGCAC
GCAATCTGTCTTCAGTGGGAATGATTATTTTTTTTACTTTCCTCTCAATCTTCAGCCTCCAGGTCATCTCAAGGTCTGGC
CTAGAAACGGATCCAATGAATTGACACGAGTAGGCCGAGCTGGCAGAGTATTGTTTTGAAGACGTCCAATTCCAGTTGAT
TCTATCCTGGACATGAGTGAGGCTGATATTCTGATTTTTTTGGCAAAGGGATAGAAAAGCATCAAGGTCAGATAATTTGT
AGTGACAAGTGACGTA-GCAACATTGTACAGATAATTTGTGCACAGGAAGCCAATGAAGCATGTAGGTAGGTCGTGTGTG
GCATTGTGGATGTTTAACAT------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------S----------------------------------------------------------------------
----------------------------S--------S------------------------------------------
-----------------------S-------------S------------------------------------------
--------------------------------------------------------S-----------------------
----------------------------------S----------------S----------------------------
--------------------------------------------------------------------------S-----
------------------S----------------------S----S-----------------------S---------
----------------------------------------------------------------------S---------
-------------------------------------------S------S-S-----------S------------S--
-----------S-SSSS-SSSSSSSSSSSSSSSS--------------------SSS--------S--------------
----------S---------------------------------------------------------------S-----
----------------------------------------------------------------S--------S-S---S
-S------S---------------------------------------------S-------------------------
-------------------------------------SS------------------------------S----------
-------------------------------------SS----------------------------S------SSS---
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------------------------------------------------------S-------------------------
--------------S-----------------------------------------------------------------
------------------------S------------------------------------------------------S
-SS----------------SSS----------------------------------------------------------
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---------S-----------------------S------SS--------------------------------------
------SSSSSS--------------------------------------------------------------------
----S----------------------------------------------------------------S-SS-------
--------SSSS--------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------------------------------------S----SS------------S-------SSS-------------S
--S-------------------------------S--------------------S-S----------------S-----
S-----S-------------S-SSSSSSS-S-SSSSSSSSSSSSSSS------------S-------S-----S----SS
SS-S---------------------------------------------S---------------------S------S-
-SS-SSSS--S--SSSSSSSS-S---------S------S--S--------S-------------------S--------
--S--------------S---SS-----S---------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS------S-----------------------------S-S-----S-S-----S---S-SSSSSSSSSSSSSSSSSSSS
S---S-----S---S------SS----SSS--SSSS----------------SSSS-SSS-S--SSSSSSSSSSSSSS--
----S------S-S--S-------------SS-------------S--S------S--SSSSSSSSSSSSSSSSS-S-SS
SSS-----SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---
------S--S----------S-SSS-SSSSSSSS---------------------------------S-----------S
----------S--------------------------SS-------------S-----S------S---SS---------
----------------------------S------S---SS-S--SSS-SSSS---------------------------
-----------------S------------S-------SS-SSSS--SSS-S-S--S-SSS-------------------
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------------------------------------------------------------------S----S-SSS-S--
-SS---S--S----S-S-SS--SSSSS-SSS-SS--S-S-SS--------------------------------------
-----S----------S---------------------------------------------------------------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_878
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-----------------------------------------------------------GCCTGGTCGCCTCATATCC--
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>reverse_3783
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----------------------ACATATTCCCTCCGTCCGGA--------------------------------------
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---------------------------------------------------------------------------
