>input_sequence_53247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------GCCACACTCCGGCAGCTGCAGCGAATTTA---T
GCAGGTCGAGGCTAGCTGAGATCCATGGCGTCGAGCAGGGCGATCTTGGCCATGGGCCTCCTTGCCGCCGTGCTGTCCCC
CGCCTTGTCAAAGCGGTCGTTTATCTCCATGCCAGCCGACGTGAGTAGTCCTGTGACCCTGGCCAACGGCCTCTCCTACG
GCTACCACGCCAACTCCTGCCCGCAGCTGCAAGACATCGTGTGGCCGATCGTGGAGAGCGCGGTCCTGGGTGAGGTGGCC
ATCGCCGCCGGCCTCCTCCGTATCTTCTTCCACGACTGCTTTCCTCAGGTAGGGGGAGACTCTTGATTCCACTTTGAACT
GCTCGTTATTTGTGTGTTTCTGCTTCAGCCTAACCGGCGGCACTTCAGGGATGCGATGCGTCCGTCCTTCTGACGGGACC
CAACAGCGAGCGGGACCTGCCGCCGAACCAGACGCTGCAGCCGCGTGCGATGCAGCTCATCGAGGACGTCCGCGTCAAGG
TACACGCCGCCTGTGGCGCCACCGTCTCCTGCGCCGACATCATCGCCCTCGCCACCCGCGACGCCGTCTTCGTGGTACGT
GCACACGTCGGTCGCTGCTG-TTGTACTGTACAACGAAAGCATCTCCCTACCTCACTCGCGAAAGAACCTATGCAGGCCG
GGGAAAGCGAAATGTTCTACTTCTACGACCTGCCGCTCGGCCGGTTTGACAGCCTCGAGCCGGCTAATAGCAGCGCCGTC
TTCGACCTCCCGCAGTCCACTGCCGACGCCGACACGCTCATCAACGCCTTCAAGAGCCGCAATCTCGAGCCCATTGACCT
CGTCGCGCTCTCTGGCGCGCACACCGTCGGGAAGGCGCACTGCAGCTCCTTCAACAACCGCTTCTCCGAGGACGCCGACT
TCGCCAGGAGGCTCGCCGCCAACTGCTCCAGCGACCAGAACCGGCTGCAGGACCTCGACGTAGAAACCCCCATCGTGTTG
GACAACCAGTACTTCAAAAACCTGATGGAGGGAAAGGGGGTGTTCACCTCCGACCAAGTGCTCATCAGAGACGGGCGCAC
CGACTGGGCGGTCAAAGGCCTCGCCGAGAACAAATGGTGGTTCTACAGCCAGTTCCGTGACTCCTTGGTGAAGCTGAGTC
AGTACCAACCCGG---AGGAAACGTGGGCGAGATCCGCCGCAACAGCTGCTTCGCGCCCAACGGACAGAGCATTCCCGCC
ACCGCCGGTGACGAGGGGTTTGCAGCCTCTGCTTGAGTTCACCGCTGACTACGGGATCGTCGTTTAGTTTGCTTGTAGTA
AGAGTATAAGCTAGTGTGTGCTGTGCTTCGTTCAATCCTCTTTCATGATGGCTCAGAACACGTTTGAAA-----------
--------------------------------------------------------------------------------
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------
>chr1A_1_TraesCS1A01G124200
TCAAGAATACCACCGAACCAAAAAAGTTGATGCCAAATGCTTCATCCGGCGAAATAGAAGTGCGTGGGGAGGGCATCTTT
CCAGCCACACCCCACCCCAACCAAAAGTTTGTGAGGGAAATGATTAAGTGGGCCAAAAAAAAGGACATGTGGAGAGATAC
GATTCGCCGAAACTTCCGCCGGCGCCCCCAAGAGCCCCCCAACATGCTGGGTTTTGGTTGGGTTTGTCGGCGCTATTTTG
ACGTCCTGGGGGCGCGCTGGGGCGTGGCCGGGCCATTTTTCGGCAAAAAAAACTGTCCGAGTCTAAAACCGAGTCTAAAA
AGGTGTCCTCAGGGGCGTCCTGGGACCGAGTGGAGATGCTCTTAGAATGATGGGTTACTTATCTTATAGGGATGATACAA
ACAGTGCTACTTTGGAATTTGCTCGTTCCTTTCTGCTATAAACAATTTGGCAAAACCTGAAGCAGAATTAGAGCAAAAGA
AATTATGTCTGATGAGCATACACTTGGATTACAAAAGAACTAGAATGAGTACAACATCAGATGAACGATGTAATTCTATC
CAAGATCAATCTTTGCTGAATTCAACGAAAGTCGCAGTGTATGCAATTACAACCTCCTTTTTGAGGGTCTTACGCATGAG
GAATCTTTGAGATTCCCTAAAGACTTGGTGTTA------AGATCGTAGAAATGAGGGGATCGCACTAGACCACCAGCACC
AAACCGACCATGGCGAAAGTTACCACGCACATGGGTTGTCGACAAACCACGTGCAGACTTTAGGGAAACTGGGAATAATC
AAGACTTCTTCCTCTCTCAGTCATGGAAAATCTGCAGGCACACAACCATTAATTAATCAGTAGA-GGTACATTTTTTGGA
TCACCACATGGTCATTCTGTAGCTTGCTAGCGACTTGATCCAGTGCATGTGCTCTGTAGCTCAGATCGGCATCAGCTGCA
GAGGTGTGCTCGTCTTATACATGACAGCATCTCGTTGACGCCAGGAAGCCACACTCCGGCAGCTGCAGCGAATTTA---T
GCAGGTCGAGGCTAGCTGAGATCCATGGCGTCGAGCAGGGCGATCTTGGCCATGGGCCTCCTTGCCGCCGTGCTGTCCCC
CGCCTTGTCAAAGCGGTCGTTTATCTCCATGCCAGCCGACGTGAGTAGTCCTGTGACCCTGGCCAACGGCCTCTCCTACG
GCTACCACGCCAACTCCTGCCCGCAGCTGCAAGACATCGTGTGGCCGATCGTGGAGAGCGCGGTCCTGGGTGAGGTGGCC
ATCGCCGCCGGCCTCCTCCGTATCTTCTTCCACGACTGCTTTCCTCAGGTAGGGGGAGACTCTTGATTCCACTTTGAACT
GCTCGTTATTTGTGTGTTTCTGCTTCAGCCTAACCGGCGGCACTTCAGGGATGCGATGCGTCCGTCCTTCTGACGGGACC
CAACAGCGAGCGGGACCTGCCGCCGAACCAGACGCTGCAGCCGCGTGCGATGCAGCTCATCGAGGACGTCCGCGTCAAGG
TACACGCCGCCTGTGGCGCCACCGTCTCCTGCGCCGACATCATCGCCCTCGCCACCCGCGACGCCGTCTTCGTGGTACGT
GCACACGTCGGTCGCTGCTG-TTGTACTGTACAACGAAAGCATCTCCCTACCTCACTCGCGAAAGAACCTATGCAGGCCG
GGGAAAGCGAAATGTTCTACTTCTACGACCTGCCGCTCGGCCGGTTTGACAGCCTCGAGCCGGCTAATAGCAGCGCCGTC
TTCGACCTCCCGCAGTCCACTGCCGACGCCGACACGCTCATCAACGCCTTCAAGAGCCGCAATCTCGAGCCCATTGACCT
CGTCGCGCTCTCTGGCGCGCACACCGTCGGGAAGGCGCACTGCAGCTCCTTCAACAACCGCTTCTCCGAGGACGCCGACT
TCGCCAGGAGGCTCGCCGCCAACTGCTCCAGCGACCAGAACCGGCTGCAGGACCTCGACGTAGAAACCCCCATCGTGTTG
GACAACCAGTACTTCAAAAACCTGATGGAGGGAAAGGGGGTGTTCACCTCCGACCAAGTGCTCATCAGAGACGGGCGCAC
CGACTGGGCGGTCAAAGGCCTCGCCGAGAACAAATGGTGGTTCTACAGCCAGTTCCGTGACTCCTTGGTGAAGCTGAGTC
AGTACCAACCCGG---AGGAAACGTGGGCGAGATCCGCCGCAACAGCTGCTTCGCGCCCAACGGACAGAGCATTCCCGCC
ACCGCCGGTGACGAGGGGTTTGCAGCCTCTGCTTGAGTTCACCGCTGACTACGGGATCGTCGTTTAGTTTGCTTGTAGTA
AGAGTATAAGCTAGTGTGTGCTGTGCTTCGTTCAATCCTCTTTCATGATGGCTCAGAACACGTTTGAAACAGTTGCACAG
GGTTTGTTCCAATAAGACTGGTCGTAATGAGAGTATCATAACTAGTATCATGTATGCCAACTAGGCAATTTAGATGATGT
GGCATAGAATTAAATGAAGAAAGAAAAGGTTGAGTATCATATTATGATACCGTATCATAATAAATGCTACACTAATATAT
GTCATGCATGACAATAAATAAAGTCATCTACGATACTACTATATAATACTATGAATTAGAGAGGTAGTATCATACACTAG
TATCATATGCATGATACTAACTTATGATACTACCCATTACAAGCAGCCTAAGGTGGTGTTTGGTTCTCTAGAAGTAGGAC
TTTTTCTAGTCCCAACTAAAAAGTCCCTAGTCCCTAAAAAGTCTCTCCTTGTTGAGGTTATTAAATGACCATATTGCCCC
TAGTATATAGGAAAATAACAATCAAATAACACCATGGGGTGGCGGGCCAATAGGTGCATTGAGGGGTATTGTTGAAAAAG
TCTCCAAAAGTCCCAAAAAGACTCTCCTTGAGAGTCTTCTTCATTTAGTCTCAAATGCCTAGTTTAGTCCCTAAAAAGTC
CCTCCCGTTTGATAAAAAAGTCTCTAAGAGGGACTTTTTCTAGTCCCTACACAAAAAAGTCCCTGAAAACAAACATCCCC
TAATACTACACGGGCTTTTACAGGCTCTTTACAGAATTTACCAAACAATAACTCTGCCCCCTCGGGGGTGGGCCCCGTTC
CACCTCCTAATTCCAATAGCAAACGTCCACGTTGCCAAGTCCGTTGACACCGTGAACAATTCCTCCGTG------GCATT
GCTCGAGTTTGTTTACTCAGGTTTTGTTTTTGGTTTGCGCACCATGGAGAGATT--------------------------
--------------------------------------------------------------------------------
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-------------------------ATGTGGATGAACTATGTAATCTTGTTTCTGACCGAGATGTCCTGTTTTGATATAA
ACTTTTTGGTACTCGATGACTTGGATGTATTTTATCTTTACTCTTATAAAAATTTGAGTTGGTGATGATGGTGTGCCTGC
CATCTT
>chr1D_361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CTTAGAATGCTGGGTTACTTATCTTATAGGGATGATACAA
-CAGTGCCACTTTGGATTT-GCTCGTTCCTTTCTGCTATAAACAATTTGGCAAAACCTGAAGCAGAATTAGAGCAAAAGA
AATTATGTCTGATGAGCATACACTTGGATTACAAAAGAACTAGAATGTGTACAATATCAGATGAACGATGTAATTCTATC
CAAGATCAATCTTTGCTGAATTCGACGAAAGTCGCAGTGTATGCAATTACAACCTCCTTTTTGAGGGTCTTACGCATTAG
GAATCTTTGAGATTCCCTAAAGACTTGCCACTAGTGTTGAGATCGTAGAAATGAGGGGATCGCACTAGACCACCAGCACC
ACCATC-----GGCGAAAGTTACCACGCACATGGGTTGTCGACAAACCACGTGTAGACTTTAGGGAAACCGGGAATAATC
AAGACTTCTTCCCCTCACAGTCATGGAAATACTGCAGGCACACAACCATTAATTAATCAGTAGA-GGTACATTTTTTGGA
TCACCACATGGTCATTCTGTAGCTTGCTAGCGACTTGATCCAGTGCATGTGCTCTGTAGCTCAGATCGGCATCAGCTGCA
GAGGTGTGCTCGTCTTATACATGACAGCATCTCGTTGACGCCAGGAAGCCACACTCCGGCAGCTGCAGCGAATTTACACT
GCAGGTCGAGGCTAGCTGAGATCCATGGCGTCGAGCAGGGCGATCTTGGCCATGGGCCTCCTTGCCGCCGTGCTGTCCCC
CGCCTTGTCAACGCGGTCGTTTATCTCCATGCCAGCCGACGTGAGTAGTCCTGTGACCCTGGCCAACGGCCTCTCCTACG
GCTACCACGCCAACTCCTGCCCACAGCTGCAAGACATCGTGTGGCCGATCGTGGAGAGCGCGGTCCTGGGTGAGGTGGCC
ATCGCCGCCGGCCTCCTCCGTATCTTCTTCCACGATTGCTTTCCTCAGGTAGGGGGAGACTCTTGATTCCACTTTGAACT
GCTCGTTATTTGTGTGTTTCTGCTTCAGCCTAACCGGCGGCACTTCAGGGCTGCGACGCGTCCGTCCTTCTGACGGGACC
CAACAGCGAGCGGGACCTGCCGCCGAACCAGACGCTGCAGCCGCGTGCGATGCAGCTCATCGAGGACGTCCGCGTCAAGG
TACACGCCGCCTGCGGCGCCACCGTCTCCTGCGCCGACATCATCGCCCTCGCCACCCGCGACGCCGTCTTCGTGGTACGT
GCACACGTCGGTCGATGCTGTTTGTACTGTACAACAGAAACTTCTCCCTACCTCACTCGCGAAAGAACCTATGCAGGCCG
GGGAAAGCGAAATGTTCTACTTCTACGACCTGCCGCTCGGCCGGTTTGACAGCCTCGAGCCGGCTAATAGCAGCGCCGTC
TTCGACCTCCCGCAGTCCACCGCCGACGCCAACACGCTCATCAACGCCTTCAAGAGCCGCAACCTCGAGCCGATCGACCT
CGTCGCGCTCTCTGGCGCGCACACCGTCGGGAAGGCGCAGTGCAGCTCCTTCAACAACCGCTTCTCCGAGGACGCCGACT
TCGCCCGGAGGCTCGCCGCCAACTGCTCCAGCGACCCGAACCGGCTGCAGGACCTCGACGTGGAAACCCCCATCGTGTTG
GACAACCAGTACTTCAAAAACCTGATGGAGGGAAAGGGGGTGTTCACCTCCGACCAAGTGCTCATCAGCGACGGGCGCAC
CGACTGGGCGGTCAAAGGCCTCGCCGAGAACAAATATTGGTTCTACAGCCAGTTCCGTGACTCCTTGGTGAAGCTGAGTC
AGTACCAACCCGG---AGGAAACGTGGGCGAGATCCGCCGCAACAGCTGCTTCGCGCCCAACGGACGGAGCATTCCCGCC
ACCGCCGGTGACGAGGGGTTCGCAGCCTCTGCTTGAGTTCACCGCTCACTACGGGATCCTCGTTTAGTTTGCTTGTAGTA
AGAGTATAAGCTAGTGTGTACTCTGCTTCGTTCAATCCTCTTTCATGATGGCTCAGAACACGTTTGAAACAGTTGCACGG
GGTTTGTTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr1B_361
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------CTTAGAACGCTGGGTTACTTATCTTATAGGGATGATACAA
-CAGTGCTACTCTGGAATTTGCTCG-TCCTTTCTGCTATAAACAATTTGGGAAAACCTGAAGCAGAGTTAGAGCAAAAGA
AATTATGTCTGATGAGCATACACTTGGATTACAAGAGAACTAGAATGAGTATAATATCAGATGAACGATGTAATTCTATC
CAAGATCAATCTTTGCTGAATTCGAGGAAAGTCGCAGTGTATGCAATTACAACCTCCTTTTTGAGGGTCTTACGCATGAG
GAATCTTTGAGATTCCCTAAAGACGTGCCACTAGTGTTGAGATCGTAGAAATGAGGGGATCGCACTAGACCACCAGCACC
ACCATG-----GGCGAAAGTTACCACGCACATGGGTTGTCGACAAACCACGTGTAGACTTAGA-GAAACCGGGAATAATC
AAGACTTCTTCCCCTCACAGTCATGGAAATACTGCAGGCACACAACCATTAATTAATCAGTAGAAGGTACATTTTTTGGA
TCACCACATGGTCATTCTGTAGCTTGCCAGCGACTTGATCCAATGCATGTGCTCTGTAGCTCAGATCCGCATCAGCTGCA
GCGGTGTGCTCGTCTTATACATGACAGCATCTCGTTGACGCCAGGAAGCCACACTCCCGCAGCTGCAGCGAATTTACACT
GCAGGTCGAGGCTAGCTGAGATCCATGGCGTCGAGCAGGGCGATCTTGGCCATGGGCCTCCTTGCCGCCGTGCTGTCCCC
CGCCTTGTCAAAGCGGTCGTTTATCTCCATGCCAGCCGACGTGAGTAGTCCTGTGACCCTGGCCAACGGCCTCTCCTACG
GTTACCACGCCAACTCCTGCCCGCAGCTGCAAGACATTGTGTGGCCGATCGTGGAGAGCGCGGTCCTGGGTGAGGTGGCC
ATCGCCGCCGGCCTCCTCCGTATCTTCTTCCACGACTGCTTTCCTCAGGTAGGGGGAGACTCTTGATTCCACTTTGAACT
GCTCGCTATTTGTGTGTTTCTGCTTCAGCCTAACCGGCGGCACTTCAGGGCTGCGACGCGTCCGTCCTTCTGACGGGACC
CAACAGCGAGCGGGACCTGCCGCCGAACCAGACGCTGCAGCCGCGTGCGATGCAGCTCATCGAGGACGTCCGCGTCAAGG
TACACGCCGCCTGTGGCGCCACCGTCTCCTGCGCCGACATCATCGCCCTCGCCACCCGCGACGCCGTCTTCGTGGTACGT
GCACACGTCGGTCGCTGCAG-TTGTACTGTACAACAAAAACATCTCCCTACCTCACTCGCGAAAGAACCTATGCAGGCCG
GGGAAAGCGAAATGTTCTACTTCTACGACCTGCCGCTCGGCCGGTTTGACAGCCTCGAGCCGGCTAATAGCAGCGCCGTC
TTCGACCTCCCGCAGTCCACCGCCGACGCCAACACGCTCATCAACGTCTTCAAGAGCCGCAACCTCGAGCCGATCGACCT
CGTCGCACTCTCTGGCGCGCACACTGTCGGGAAGGCGCAGTGCAGCTCCTTCAACAACCGCTTCTCCGAGGACGCCGACT
TCGCCCGGAGGCTCGCCGCCAACTGCTCCAGCGACCCGAACCGGCTGCAGGACCTCGACGTGGAAACCCCCATCGTGTTG
GACAACCAGTACTTCAAAAACCTGATGGAGGGAAAGGGGGTGTTCACCTCCGACCAAGTGCTCATCAGCGACGGGCGCAC
CGACTGGGCGGTCAAAGGCCTCGCCGAGAACAAATATTGGTTCTACAGCCAGTTCCGTGACTCCTTGGTGAAGCTGAGTC
AGTACCAACCCGG---AGGAAACGTGGGCGAGATCCGCCGCAACAGCTGCTTCACGCCCAACGGACAGAGCATTCCCGCC
ACCGCCGGTGACGAGGGGTTCGCAGCCTCTGCTTGAGTTCACCGCTCACTACGGGATCGTCGTTTAGTTTGCTTGTAGTA
AGAGTATAAGCTCGTGTGTACTCTGCTTCGTTCAATCCTCTTTCATGATGGCTCAGAACACGTTTGAAACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNN----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CGTTC
CACCTCCTAATTCCAATAGCAAACGTCCACGTTGCCAAGTCCGCTGACACCGTGAACAATCCCTCCGTGAGTCTAGCACT
GCTCGAGTTTGTTCACTCATGTTTTGCTTTTGGCTGGCGCGCCACTGAGAGATTATGGTGGCGTTTGGTTTGAGGGCGGC
GAGAGATTGGTTAAGGATATCCGTAACCACGTGTTTGGGGATAACTGATTTTTCTGTTTGGTTGTAAGGATGGGAGGTGG
AAGGATAGCCAGGATTATTTGTTTGGTTGCATGGATAAGATGTGGATGGATTGTCTATAATTGGGCAAATATACATCAAG
AAAATAAACTACATACACACATGTGTACATCAATTATACCACACATACATCAATTATACCACACACATATGCACGGATTT
GAGACAGAAATATCAAAGTCACTCACATGTGTGAATCTACACACATATCAGTTTAGCACGTGCGAGGTTGCAAAGCGTGA
AGATCCAACACATCAACACATCAATCTCCAGAACATGCATCCTTACAGAAAATCCTGGATTAGCACTGCCGCATCAAACT
CCAGAACATGCAGCCGAATTAGCACGGCCGACGGCCATCATCTCTCACGCGAATTAGCACTGCTGCTCGTCGTTCCCAGC
GACCGCACTTCACCATCTCCATGCCGCCCTTGCTCACGTGGGCAGAGCCGTCGAGCTTCAGCATAGACATAGGAGATCAG
AGGAAGGGGAAGGGAGAGCGTCGCCACCACTTTCGCCCTTGATGCGCCGCCGCCATCGCACATGACCTGCCCCGCAGTAC
GAGGTCAAGGATTGAGATGATATGGGGAAAATAGACCGGGAGCGAGTGAAAGACATAGGCAGAGAATGATTCGGCTACGC
GCGCGTCGGGTGGCTGAGTATATCCGCCAGATTTTCGCGGATGTGTTCAGCCAGGTTTTGGAAGCATATTCTAGGAATCT
TGACTGCCCATATCCACGCTTGTGTTTCAACCAAACGACTGGCAGCCGCTTTTCAAGTGGCTATCCCTAACCAGCCGTGG
GATACCTACCAAACCAAATGCCACCATGTGGATGAACTATGTAATTTTGTTTCCAACTGAGATGTACTGTTTTGATATAA
ACTTTTTGGTACTCAATGACTTGGATGTATTTTAT---------------------------------------------
------
>chr2A_1692
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----------------------CTACGACGTGCCGCTCGGCAGGCTCGACAGCCTCGCGCCGGCGCCGAGCTCGGCCGTC
TTCGATCTCCCCCAGGCCAGCTCCAACGCCTCCACGCTCATCGACGTCTTCGATACCCGCAACCTCGACAATGTCGACCT
CGTCGCGCTCTCAGGTGGCCACACCATCGGGAAGGGCCACTGCAGCTCCTTCTCCAACCGCTTCTCCGAGGACTCCGACT
TCGTCCGAAGCCTCGCCTCCAACTGCTCCAGCGACTTCAACCGGCTGCAGGACCTCGACGTCACCACCCCGGACGTGTTC
GACATCAAGTACTTCACCAACCTGCAACAGGGAAAGGGGGTGTTCACCTCCGACCAGAAGCTCACCGCGGACTGGCGCAC
CGAATGGGTTGTCAACGGCTTTGCCGGGAACCACTGGTGGTTCTTCGGCCAGTTTGCTGCTTCCATGACCAAGCTCGGGA
ATCTCCAGGGGCCCCAAGGAAACGTCGGCGAGATCCGTCGCAACAGCTGCTTCGTGCGCAATGGACAGAGCATCCTCACC
ACCACCAGCGACGAGGGGCTCGCCGCCTCTGCTTGAGATCACCG------------------------------------
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------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S------------------------------
S-------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------------S--------------------------------------------------------
---------------------------SSSS-------------------------------------------------
-SSSS-SSSSS------------------------------------------S---------------S----------
------------S---S------------SS-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---S----------------------------------------
--------------------------------------------------------------------------------
--------------------S---------S-------------------------------S--------S--S-----
--------------------------------------------------------------------------------
-----S------------------------------S------------------------S------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------S---------------------------------
-------------------S--S-------------------------------------------------------S-
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-------------------------------------------S----------------S-----------------S-
-------------S-----S------S------S-S----S---SS----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------S-------SS--S-------S--------------
--------------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GTCGGCGCTATTTTG
ACGTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1982
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-------------------------------------------------------------AGAAACCCCCATCGTGTTG
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>forward_253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATTTTG
ACGTCCTGGGGGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2340
--------------------------------------------------------------------------------
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-------------------GCTGTGCTTCGTTCAATCCTC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>forward_725
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TAGACCACCAGCACC
AAACC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_2679
--------------------------------------------------------------------------------
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--------------------------------------ACAAGCAGCCTAAGGTGGTG----------------------
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------
